Multiple sequence alignment - TraesCS1A01G328800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G328800 chr1A 100.000 2738 0 0 1 2738 517518807 517521544 0.000000e+00 5057.0
1 TraesCS1A01G328800 chr1A 78.509 228 34 10 2505 2730 251347985 251348199 4.760000e-28 135.0
2 TraesCS1A01G328800 chr1A 85.870 92 9 4 2319 2408 517521086 517521175 8.070000e-16 95.3
3 TraesCS1A01G328800 chr1A 85.870 92 9 4 2280 2369 517521125 517521214 8.070000e-16 95.3
4 TraesCS1A01G328800 chr1B 83.771 2514 215 88 279 2709 570525280 570527683 0.000000e+00 2204.0
5 TraesCS1A01G328800 chr1B 82.263 919 67 40 1379 2288 570831730 570832561 0.000000e+00 706.0
6 TraesCS1A01G328800 chr1B 87.924 472 32 10 927 1396 570825975 570826423 1.440000e-147 532.0
7 TraesCS1A01G328800 chr1B 80.727 633 58 27 1611 2213 570720196 570720794 4.190000e-118 435.0
8 TraesCS1A01G328800 chr1B 83.226 310 43 5 455 760 570718414 570718718 2.690000e-70 276.0
9 TraesCS1A01G328800 chr1B 85.448 268 26 5 1703 1970 570718812 570719066 1.620000e-67 267.0
10 TraesCS1A01G328800 chr1B 83.206 262 37 6 455 710 570814893 570815153 1.640000e-57 233.0
11 TraesCS1A01G328800 chr1B 81.416 113 12 4 1998 2103 570719071 570719181 1.750000e-12 84.2
12 TraesCS1A01G328800 chr1B 76.243 181 28 13 2237 2409 555855658 555855831 6.280000e-12 82.4
13 TraesCS1A01G328800 chr1B 74.208 221 40 14 2237 2447 49751282 49751495 2.920000e-10 76.8
14 TraesCS1A01G328800 chr1D 86.393 2021 142 55 279 2236 421464200 421466150 0.000000e+00 2085.0
15 TraesCS1A01G328800 chr1D 87.868 1632 91 37 311 1882 421225643 421227227 0.000000e+00 1818.0
16 TraesCS1A01G328800 chr1D 87.843 255 24 5 1936 2185 421227236 421227488 2.670000e-75 292.0
17 TraesCS1A01G328800 chr1D 85.294 272 17 4 1 264 421225256 421225512 2.700000e-65 259.0
18 TraesCS1A01G328800 chr1D 87.821 156 12 6 132 282 421463946 421464099 2.800000e-40 176.0
19 TraesCS1A01G328800 chr1D 75.000 232 38 12 2431 2649 199607967 199608191 3.760000e-14 89.8
20 TraesCS1A01G328800 chr5D 78.556 928 136 38 846 1743 556423257 556424151 1.110000e-153 553.0
21 TraesCS1A01G328800 chr5D 78.521 852 113 35 930 1739 559979061 559978238 1.890000e-136 496.0
22 TraesCS1A01G328800 chr5D 87.611 113 11 2 2325 2437 110870037 110869928 7.960000e-26 128.0
23 TraesCS1A01G328800 chr5D 76.744 172 27 12 2500 2667 444299513 444299351 1.750000e-12 84.2
24 TraesCS1A01G328800 chr4A 80.000 785 111 30 930 1688 613544331 613543567 3.100000e-149 538.0
25 TraesCS1A01G328800 chr4A 79.845 774 106 28 943 1688 604940680 604941431 1.120000e-143 520.0
26 TraesCS1A01G328800 chr4A 79.572 607 87 19 1108 1688 604856906 604857501 1.530000e-107 399.0
27 TraesCS1A01G328800 chr5B 80.237 759 100 30 958 1688 710314394 710313658 2.420000e-145 525.0
28 TraesCS1A01G328800 chr2A 82.208 607 63 27 1266 1852 643230802 643230221 5.300000e-132 481.0
29 TraesCS1A01G328800 chr2A 82.197 264 25 14 937 1197 643231160 643230916 9.940000e-50 207.0
30 TraesCS1A01G328800 chr2A 80.093 216 34 6 2525 2736 138192598 138192808 4.720000e-33 152.0
31 TraesCS1A01G328800 chr2B 83.613 476 57 11 1266 1738 585757061 585756604 7.010000e-116 427.0
32 TraesCS1A01G328800 chr2B 81.439 264 27 13 937 1197 585757419 585757175 2.150000e-46 196.0
33 TraesCS1A01G328800 chr6D 85.165 182 22 4 2325 2504 149735598 149735420 6.020000e-42 182.0
34 TraesCS1A01G328800 chr5A 81.140 228 33 8 2500 2721 366123004 366123227 1.010000e-39 174.0
35 TraesCS1A01G328800 chr5A 86.047 86 9 2 2325 2409 356105978 356106061 3.760000e-14 89.8
36 TraesCS1A01G328800 chr6B 85.366 164 21 3 2358 2518 288577384 288577221 1.690000e-37 167.0
37 TraesCS1A01G328800 chr4D 82.323 198 29 4 2500 2692 82143790 82143986 1.690000e-37 167.0
38 TraesCS1A01G328800 chr7D 75.974 308 40 24 2344 2646 6587611 6587889 7.960000e-26 128.0
39 TraesCS1A01G328800 chr4B 84.706 85 13 0 489 573 76818027 76817943 4.860000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G328800 chr1A 517518807 517521544 2737 False 1749.200000 5057 90.580000 1 2738 3 chr1A.!!$F2 2737
1 TraesCS1A01G328800 chr1B 570525280 570527683 2403 False 2204.000000 2204 83.771000 279 2709 1 chr1B.!!$F3 2430
2 TraesCS1A01G328800 chr1B 570831730 570832561 831 False 706.000000 706 82.263000 1379 2288 1 chr1B.!!$F6 909
3 TraesCS1A01G328800 chr1B 570718414 570720794 2380 False 265.550000 435 82.704250 455 2213 4 chr1B.!!$F7 1758
4 TraesCS1A01G328800 chr1D 421463946 421466150 2204 False 1130.500000 2085 87.107000 132 2236 2 chr1D.!!$F3 2104
5 TraesCS1A01G328800 chr1D 421225256 421227488 2232 False 789.666667 1818 87.001667 1 2185 3 chr1D.!!$F2 2184
6 TraesCS1A01G328800 chr5D 556423257 556424151 894 False 553.000000 553 78.556000 846 1743 1 chr5D.!!$F1 897
7 TraesCS1A01G328800 chr5D 559978238 559979061 823 True 496.000000 496 78.521000 930 1739 1 chr5D.!!$R3 809
8 TraesCS1A01G328800 chr4A 613543567 613544331 764 True 538.000000 538 80.000000 930 1688 1 chr4A.!!$R1 758
9 TraesCS1A01G328800 chr4A 604940680 604941431 751 False 520.000000 520 79.845000 943 1688 1 chr4A.!!$F2 745
10 TraesCS1A01G328800 chr4A 604856906 604857501 595 False 399.000000 399 79.572000 1108 1688 1 chr4A.!!$F1 580
11 TraesCS1A01G328800 chr5B 710313658 710314394 736 True 525.000000 525 80.237000 958 1688 1 chr5B.!!$R1 730
12 TraesCS1A01G328800 chr2A 643230221 643231160 939 True 344.000000 481 82.202500 937 1852 2 chr2A.!!$R1 915
13 TraesCS1A01G328800 chr2B 585756604 585757419 815 True 311.500000 427 82.526000 937 1738 2 chr2B.!!$R1 801

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 240 0.104855 TGCGGCCTCATCATGTACTC 59.895 55.0 0.0 0.0 0.0 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 3017 0.527565 AATCCATCGTTGCCACTTGC 59.472 50.0 0.0 0.0 41.77 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.990120 AATGATGGAACCAAGAAAGAAGG 57.010 39.130 0.00 0.00 0.00 3.46
31 32 3.147553 ACCAAGAAAGAAGGAGGAAGC 57.852 47.619 0.00 0.00 0.00 3.86
36 37 3.749226 AGAAAGAAGGAGGAAGCAACAG 58.251 45.455 0.00 0.00 0.00 3.16
51 52 2.704572 CAACAGGCGAAAGAAGGAGAT 58.295 47.619 0.00 0.00 0.00 2.75
53 54 3.528597 ACAGGCGAAAGAAGGAGATAC 57.471 47.619 0.00 0.00 0.00 2.24
63 64 4.839668 AGAAGGAGATACGGAAGATTCG 57.160 45.455 0.00 0.00 0.00 3.34
64 65 4.208746 AGAAGGAGATACGGAAGATTCGT 58.791 43.478 0.00 0.00 43.64 3.85
65 66 5.374921 AGAAGGAGATACGGAAGATTCGTA 58.625 41.667 0.00 0.00 45.30 3.43
72 73 3.175109 ACGGAAGATTCGTATGGAACC 57.825 47.619 0.00 0.00 39.22 3.62
73 74 2.124903 CGGAAGATTCGTATGGAACCG 58.875 52.381 0.00 0.00 37.50 4.44
74 75 2.480845 GGAAGATTCGTATGGAACCGG 58.519 52.381 0.00 0.00 37.50 5.28
75 76 1.865340 GAAGATTCGTATGGAACCGGC 59.135 52.381 0.00 0.00 37.50 6.13
76 77 0.249322 AGATTCGTATGGAACCGGCG 60.249 55.000 0.00 0.00 37.50 6.46
81 82 1.523032 GTATGGAACCGGCGAAGGG 60.523 63.158 9.30 0.00 35.02 3.95
143 152 2.281276 CCCGCCTAATTACCGGCC 60.281 66.667 0.00 0.00 43.38 6.13
152 161 2.003658 AATTACCGGCCATGCTTGCG 62.004 55.000 0.00 0.00 0.00 4.85
182 192 4.999751 TCCAACAAATTAAAAATGGCGC 57.000 36.364 0.00 0.00 0.00 6.53
188 198 1.851658 ATTAAAAATGGCGCGATGGC 58.148 45.000 12.10 0.00 45.12 4.40
224 234 2.512286 CACGTGCGGCCTCATCAT 60.512 61.111 0.82 0.00 0.00 2.45
229 239 0.179073 GTGCGGCCTCATCATGTACT 60.179 55.000 0.00 0.00 0.00 2.73
230 240 0.104855 TGCGGCCTCATCATGTACTC 59.895 55.000 0.00 0.00 0.00 2.59
252 262 6.095440 ACTCCACCATTTGCAGTAACATAATC 59.905 38.462 0.00 0.00 0.00 1.75
264 288 6.477033 GCAGTAACATAATCAATCGTCTCACT 59.523 38.462 0.00 0.00 0.00 3.41
267 291 6.893958 AACATAATCAATCGTCTCACTCAC 57.106 37.500 0.00 0.00 0.00 3.51
269 293 3.961480 AATCAATCGTCTCACTCACCA 57.039 42.857 0.00 0.00 0.00 4.17
270 294 2.724977 TCAATCGTCTCACTCACCAC 57.275 50.000 0.00 0.00 0.00 4.16
271 295 1.272490 TCAATCGTCTCACTCACCACC 59.728 52.381 0.00 0.00 0.00 4.61
272 296 0.608640 AATCGTCTCACTCACCACCC 59.391 55.000 0.00 0.00 0.00 4.61
273 297 0.541998 ATCGTCTCACTCACCACCCA 60.542 55.000 0.00 0.00 0.00 4.51
274 298 1.179174 TCGTCTCACTCACCACCCAG 61.179 60.000 0.00 0.00 0.00 4.45
275 299 1.004440 GTCTCACTCACCACCCAGC 60.004 63.158 0.00 0.00 0.00 4.85
276 300 1.459348 TCTCACTCACCACCCAGCA 60.459 57.895 0.00 0.00 0.00 4.41
277 301 1.004080 CTCACTCACCACCCAGCAG 60.004 63.158 0.00 0.00 0.00 4.24
283 401 0.253044 TCACCACCCAGCAGCTAATC 59.747 55.000 0.00 0.00 0.00 1.75
304 427 3.126831 CCAGAGCGAATATGACAAGGTC 58.873 50.000 0.00 0.00 0.00 3.85
305 428 3.430790 CCAGAGCGAATATGACAAGGTCA 60.431 47.826 1.05 1.05 46.90 4.02
306 429 3.801050 CAGAGCGAATATGACAAGGTCAG 59.199 47.826 5.25 0.00 46.04 3.51
307 430 3.126831 GAGCGAATATGACAAGGTCAGG 58.873 50.000 5.25 0.00 46.04 3.86
308 431 2.501723 AGCGAATATGACAAGGTCAGGT 59.498 45.455 5.25 0.00 46.04 4.00
309 432 2.866762 GCGAATATGACAAGGTCAGGTC 59.133 50.000 5.25 1.95 46.04 3.85
310 433 3.678806 GCGAATATGACAAGGTCAGGTCA 60.679 47.826 5.25 0.00 46.04 4.02
311 434 4.115516 CGAATATGACAAGGTCAGGTCAG 58.884 47.826 5.25 0.00 46.04 3.51
312 435 4.446371 GAATATGACAAGGTCAGGTCAGG 58.554 47.826 5.25 0.00 46.04 3.86
313 436 1.734655 ATGACAAGGTCAGGTCAGGT 58.265 50.000 5.25 0.00 46.04 4.00
347 470 2.102420 ACCTCAACATTGACTCACGTGA 59.898 45.455 18.88 18.88 32.90 4.35
422 560 3.110705 AGCACTACTCCCACTTGATCAT 58.889 45.455 0.00 0.00 0.00 2.45
457 595 5.874892 CTAGCTCAGCTACAACGATTAAC 57.125 43.478 0.83 0.00 40.44 2.01
475 613 8.527810 ACGATTAACATTACCACCATGATTTTT 58.472 29.630 0.00 0.00 0.00 1.94
558 696 8.055279 TCGAGCCAGATTCAATCTAAAATTTT 57.945 30.769 8.75 8.75 37.58 1.82
560 698 9.226345 CGAGCCAGATTCAATCTAAAATTTTAC 57.774 33.333 6.54 0.00 37.58 2.01
599 747 6.099341 ACTGAGTTTTGAAAACGCAAAATCT 58.901 32.000 23.44 2.20 45.96 2.40
605 753 5.964887 TTGAAAACGCAAAATCTGAAAGG 57.035 34.783 0.00 0.00 0.00 3.11
701 852 3.924686 CCATCTTCTTTCACAATTGCTGC 59.075 43.478 5.05 0.00 0.00 5.25
708 859 3.902261 TTCACAATTGCTGCAGTGTAG 57.098 42.857 16.64 3.51 33.84 2.74
739 891 3.740495 TTGTGGAGCCCCGGCAAAA 62.740 57.895 8.74 0.00 44.88 2.44
743 895 4.056125 GAGCCCCGGCAAAAGCAC 62.056 66.667 8.74 0.00 44.88 4.40
753 909 1.003769 GCAAAAGCACGGCAAGTAGC 61.004 55.000 0.00 0.00 44.65 3.58
801 961 1.807142 GGAAACCTGTAAGCAGAGCAC 59.193 52.381 0.00 0.00 45.28 4.40
802 962 1.461127 GAAACCTGTAAGCAGAGCACG 59.539 52.381 0.00 0.00 45.28 5.34
838 1023 0.110486 TCTTCCCAACCAACTCCTGC 59.890 55.000 0.00 0.00 0.00 4.85
840 1025 1.650242 TTCCCAACCAACTCCTGCCA 61.650 55.000 0.00 0.00 0.00 4.92
841 1026 1.903404 CCCAACCAACTCCTGCCAC 60.903 63.158 0.00 0.00 0.00 5.01
842 1027 2.260869 CCAACCAACTCCTGCCACG 61.261 63.158 0.00 0.00 0.00 4.94
844 1029 2.752807 AACCAACTCCTGCCACGGT 61.753 57.895 0.00 0.00 0.00 4.83
891 1643 1.798223 CGCTTCCACTCGACATCAAAA 59.202 47.619 0.00 0.00 0.00 2.44
908 1660 3.896888 TCAAAAGAACATTCCATGGCTGT 59.103 39.130 6.96 10.42 33.60 4.40
1169 1957 4.856607 CGCCGACGAGAAGCTCCC 62.857 72.222 0.00 0.00 43.93 4.30
1199 1987 4.087892 CTCCCAGCACCAGGACGG 62.088 72.222 0.00 0.00 42.50 4.79
1449 2685 2.434359 GTCCTCAACTTCCCCGCG 60.434 66.667 0.00 0.00 0.00 6.46
1701 2963 4.148825 GACATGACGGCCTCGGCT 62.149 66.667 8.00 0.00 46.40 5.52
1754 3017 3.405831 TCTGATGCAACAAGAGAGTTGG 58.594 45.455 8.66 0.00 46.81 3.77
1755 3018 1.881973 TGATGCAACAAGAGAGTTGGC 59.118 47.619 8.66 2.64 46.81 4.52
1758 3021 1.677576 TGCAACAAGAGAGTTGGCAAG 59.322 47.619 0.00 0.00 46.81 4.01
1759 3022 1.678101 GCAACAAGAGAGTTGGCAAGT 59.322 47.619 7.41 7.41 46.81 3.16
1760 3023 2.542411 GCAACAAGAGAGTTGGCAAGTG 60.542 50.000 13.24 0.00 46.81 3.16
1820 3118 0.183492 TCTTCCCTGTTGCTGTTGCT 59.817 50.000 0.00 0.00 40.48 3.91
1822 3120 1.108727 TTCCCTGTTGCTGTTGCTGG 61.109 55.000 0.00 0.00 40.48 4.85
1823 3121 2.337532 CCTGTTGCTGTTGCTGGC 59.662 61.111 0.00 0.00 40.48 4.85
1824 3122 2.337532 CTGTTGCTGTTGCTGGCC 59.662 61.111 0.00 0.00 40.48 5.36
1825 3123 3.547249 CTGTTGCTGTTGCTGGCCG 62.547 63.158 0.00 0.00 40.48 6.13
1857 3155 5.692654 GTCTCGTTCCAGAATTTAGATAGCC 59.307 44.000 0.00 0.00 0.00 3.93
1901 3200 0.604073 TGAGACCGACGGCATGTTTA 59.396 50.000 15.39 0.00 0.00 2.01
1910 3209 2.415512 GACGGCATGTTTAGGTCTGAAC 59.584 50.000 0.00 0.00 0.00 3.18
1938 3241 1.873591 GCCGTGAAAGATGTGAAGTGT 59.126 47.619 0.00 0.00 0.00 3.55
1953 3256 4.803613 GTGAAGTGTCAAATGTTTGGGTTC 59.196 41.667 5.71 4.99 38.66 3.62
1970 3287 3.119495 GGGTTCGAATCCAGTCAAAATGG 60.119 47.826 22.82 0.00 39.33 3.16
1971 3288 3.119495 GGTTCGAATCCAGTCAAAATGGG 60.119 47.826 0.00 0.00 38.44 4.00
1978 3295 1.619827 CCAGTCAAAATGGGTGCATGT 59.380 47.619 0.00 0.00 33.94 3.21
2006 3324 1.271108 TGTTCATAGGCGCCAAGTTCA 60.271 47.619 31.54 16.90 0.00 3.18
2074 3416 3.188460 CAGAAAAGGTACACGGGATTGTG 59.812 47.826 0.00 0.00 45.41 3.33
2155 3502 2.169769 TCGACCAGGTCAAGTCAAAGTT 59.830 45.455 20.13 0.00 33.08 2.66
2239 3592 7.959733 TGCGTACAAGATAAACACAATAAGAG 58.040 34.615 0.00 0.00 0.00 2.85
2240 3593 6.900299 GCGTACAAGATAAACACAATAAGAGC 59.100 38.462 0.00 0.00 0.00 4.09
2308 3711 1.649664 GCAACTCGAGCAGATGATGT 58.350 50.000 13.61 0.00 0.00 3.06
2310 3713 3.388308 GCAACTCGAGCAGATGATGTAT 58.612 45.455 13.61 0.00 0.00 2.29
2311 3714 4.550422 GCAACTCGAGCAGATGATGTATA 58.450 43.478 13.61 0.00 0.00 1.47
2312 3715 5.167121 GCAACTCGAGCAGATGATGTATAT 58.833 41.667 13.61 0.00 0.00 0.86
2313 3716 6.325596 GCAACTCGAGCAGATGATGTATATA 58.674 40.000 13.61 0.00 0.00 0.86
2314 3717 6.977502 GCAACTCGAGCAGATGATGTATATAT 59.022 38.462 13.61 0.00 0.00 0.86
2315 3718 7.490725 GCAACTCGAGCAGATGATGTATATATT 59.509 37.037 13.61 0.00 0.00 1.28
2316 3719 8.805688 CAACTCGAGCAGATGATGTATATATTG 58.194 37.037 13.61 0.00 0.00 1.90
2317 3720 7.487484 ACTCGAGCAGATGATGTATATATTGG 58.513 38.462 13.61 0.00 0.00 3.16
2318 3721 7.340487 ACTCGAGCAGATGATGTATATATTGGA 59.660 37.037 13.61 0.00 0.00 3.53
2319 3722 7.710896 TCGAGCAGATGATGTATATATTGGAG 58.289 38.462 0.00 0.00 0.00 3.86
2320 3723 7.557719 TCGAGCAGATGATGTATATATTGGAGA 59.442 37.037 0.00 0.00 0.00 3.71
2321 3724 8.358895 CGAGCAGATGATGTATATATTGGAGAT 58.641 37.037 0.00 0.00 0.00 2.75
2322 3725 9.478768 GAGCAGATGATGTATATATTGGAGATG 57.521 37.037 0.00 0.00 0.00 2.90
2323 3726 8.990203 AGCAGATGATGTATATATTGGAGATGT 58.010 33.333 0.00 0.00 0.00 3.06
2337 3740 5.801350 TGGAGATGTAAAAGAGCAATTCG 57.199 39.130 0.00 0.00 0.00 3.34
2338 3741 5.487433 TGGAGATGTAAAAGAGCAATTCGA 58.513 37.500 0.00 0.00 0.00 3.71
2339 3742 5.582269 TGGAGATGTAAAAGAGCAATTCGAG 59.418 40.000 0.00 0.00 0.00 4.04
2340 3743 5.582665 GGAGATGTAAAAGAGCAATTCGAGT 59.417 40.000 0.00 0.00 0.00 4.18
2341 3744 6.757010 GGAGATGTAAAAGAGCAATTCGAGTA 59.243 38.462 0.00 0.00 0.00 2.59
2342 3745 7.043059 GGAGATGTAAAAGAGCAATTCGAGTAG 60.043 40.741 0.00 0.00 0.00 2.57
2343 3746 7.548097 AGATGTAAAAGAGCAATTCGAGTAGA 58.452 34.615 0.00 0.00 0.00 2.59
2344 3747 8.200792 AGATGTAAAAGAGCAATTCGAGTAGAT 58.799 33.333 0.00 0.00 0.00 1.98
2345 3748 7.525688 TGTAAAAGAGCAATTCGAGTAGATG 57.474 36.000 0.00 0.00 0.00 2.90
2346 3749 7.320399 TGTAAAAGAGCAATTCGAGTAGATGA 58.680 34.615 0.00 0.00 0.00 2.92
2347 3750 7.981789 TGTAAAAGAGCAATTCGAGTAGATGAT 59.018 33.333 0.00 0.00 0.00 2.45
2348 3751 6.841443 AAAGAGCAATTCGAGTAGATGATG 57.159 37.500 0.00 0.00 0.00 3.07
2349 3752 5.528043 AGAGCAATTCGAGTAGATGATGT 57.472 39.130 0.00 0.00 0.00 3.06
2350 3753 6.641169 AGAGCAATTCGAGTAGATGATGTA 57.359 37.500 0.00 0.00 0.00 2.29
2351 3754 7.225784 AGAGCAATTCGAGTAGATGATGTAT 57.774 36.000 0.00 0.00 0.00 2.29
2352 3755 8.341892 AGAGCAATTCGAGTAGATGATGTATA 57.658 34.615 0.00 0.00 0.00 1.47
2381 3784 6.071952 TGGAGATGTAAAAGAGCAATTCCAAC 60.072 38.462 0.00 0.00 32.26 3.77
2387 3790 6.489700 TGTAAAAGAGCAATTCCAACAGATGA 59.510 34.615 0.00 0.00 0.00 2.92
2397 3800 3.753815 TCCAACAGATGATGCAAAGTGA 58.246 40.909 0.00 0.00 0.00 3.41
2404 3807 6.175471 ACAGATGATGCAAAGTGAAGATGTA 58.825 36.000 0.00 0.00 0.00 2.29
2410 3813 4.854399 TGCAAAGTGAAGATGTAAAACCG 58.146 39.130 0.00 0.00 0.00 4.44
2417 3820 2.752640 ATGTAAAACCGGCCGCCC 60.753 61.111 22.85 3.20 0.00 6.13
2443 3846 4.093998 CGTACGGATGTGTACAACTAGTCT 59.906 45.833 7.57 0.00 43.89 3.24
2454 3857 0.460987 AACTAGTCTGCATGAGCGCC 60.461 55.000 2.29 0.00 46.23 6.53
2456 3859 3.430565 TAGTCTGCATGAGCGCCGG 62.431 63.158 2.29 0.00 46.23 6.13
2483 3886 0.528684 GCATCGAAAGACGGGAGGAG 60.529 60.000 0.00 0.00 46.97 3.69
2485 3888 0.970937 ATCGAAAGACGGGAGGAGCA 60.971 55.000 0.00 0.00 46.97 4.26
2486 3889 1.446272 CGAAAGACGGGAGGAGCAC 60.446 63.158 0.00 0.00 38.46 4.40
2557 3960 3.797353 GGGGAGCTCGAATGGCCA 61.797 66.667 8.56 8.56 0.00 5.36
2667 4071 2.420043 CAACGACGGTGTGGAGGT 59.580 61.111 4.27 0.00 0.00 3.85
2669 4073 0.388134 CAACGACGGTGTGGAGGTAG 60.388 60.000 4.27 0.00 0.00 3.18
2676 4080 1.374252 GTGTGGAGGTAGGTGTGCG 60.374 63.158 0.00 0.00 0.00 5.34
2685 4089 1.141019 TAGGTGTGCGGCTCGAATC 59.859 57.895 0.00 0.00 0.00 2.52
2686 4090 1.320344 TAGGTGTGCGGCTCGAATCT 61.320 55.000 0.00 0.00 0.00 2.40
2688 4092 1.446099 GTGTGCGGCTCGAATCTGA 60.446 57.895 0.00 0.00 0.00 3.27
2692 4096 2.956964 CGGCTCGAATCTGACGGC 60.957 66.667 0.00 0.00 0.00 5.68
2694 4098 2.956964 GCTCGAATCTGACGGCGG 60.957 66.667 13.24 0.00 0.00 6.13
2695 4099 2.956964 CTCGAATCTGACGGCGGC 60.957 66.667 13.24 9.67 0.00 6.53
2696 4100 3.699955 CTCGAATCTGACGGCGGCA 62.700 63.158 17.61 17.61 0.00 5.69
2699 4103 4.473520 AATCTGACGGCGGCAGGG 62.474 66.667 39.43 19.54 34.20 4.45
2716 4120 4.388499 GCGGTCGGGGAGCTCAAA 62.388 66.667 17.19 0.00 0.00 2.69
2717 4121 2.584608 CGGTCGGGGAGCTCAAAT 59.415 61.111 17.19 0.00 0.00 2.32
2718 4122 1.521681 CGGTCGGGGAGCTCAAATC 60.522 63.158 17.19 0.00 0.00 2.17
2719 4123 1.602237 GGTCGGGGAGCTCAAATCA 59.398 57.895 17.19 0.00 0.00 2.57
2720 4124 0.181350 GGTCGGGGAGCTCAAATCAT 59.819 55.000 17.19 0.00 0.00 2.45
2721 4125 1.303309 GTCGGGGAGCTCAAATCATG 58.697 55.000 17.19 0.00 0.00 3.07
2722 4126 0.464373 TCGGGGAGCTCAAATCATGC 60.464 55.000 17.19 0.00 0.00 4.06
2723 4127 1.779025 CGGGGAGCTCAAATCATGCG 61.779 60.000 17.19 0.00 0.00 4.73
2724 4128 1.450531 GGGGAGCTCAAATCATGCGG 61.451 60.000 17.19 0.00 0.00 5.69
2725 4129 1.358046 GGAGCTCAAATCATGCGGC 59.642 57.895 17.19 0.00 0.00 6.53
2726 4130 1.010350 GAGCTCAAATCATGCGGCG 60.010 57.895 9.40 0.51 34.33 6.46
2727 4131 2.025156 GCTCAAATCATGCGGCGG 59.975 61.111 9.78 0.00 0.00 6.13
2728 4132 2.025156 CTCAAATCATGCGGCGGC 59.975 61.111 9.78 9.68 40.52 6.53
2729 4133 3.795280 CTCAAATCATGCGGCGGCG 62.795 63.158 28.70 28.70 44.10 6.46
2730 4134 3.875039 CAAATCATGCGGCGGCGA 61.875 61.111 36.87 20.29 44.10 5.54
2731 4135 2.901840 AAATCATGCGGCGGCGAT 60.902 55.556 36.87 21.64 44.10 4.58
2732 4136 2.480610 AAATCATGCGGCGGCGATT 61.481 52.632 36.87 22.03 44.10 3.34
2733 4137 2.392613 AAATCATGCGGCGGCGATTC 62.393 55.000 36.87 18.23 44.10 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.519077 CTTTCGCCTGTTGCTTCCTC 59.481 55.000 0.00 0.00 38.05 3.71
31 32 2.169832 TCTCCTTCTTTCGCCTGTTG 57.830 50.000 0.00 0.00 0.00 3.33
36 37 1.407979 TCCGTATCTCCTTCTTTCGCC 59.592 52.381 0.00 0.00 0.00 5.54
51 52 3.243168 CGGTTCCATACGAATCTTCCGTA 60.243 47.826 0.00 0.00 44.99 4.02
53 54 2.124903 CGGTTCCATACGAATCTTCCG 58.875 52.381 0.00 0.00 32.20 4.30
63 64 1.523032 CCCTTCGCCGGTTCCATAC 60.523 63.158 1.90 0.00 0.00 2.39
64 65 2.737881 CCCCTTCGCCGGTTCCATA 61.738 63.158 1.90 0.00 0.00 2.74
65 66 4.109675 CCCCTTCGCCGGTTCCAT 62.110 66.667 1.90 0.00 0.00 3.41
143 152 1.994779 GGAAATTTCCACGCAAGCATG 59.005 47.619 28.76 0.00 46.76 4.06
164 173 4.092675 CCATCGCGCCATTTTTAATTTGTT 59.907 37.500 0.00 0.00 0.00 2.83
182 192 1.229428 ATATTTGCACCTCGCCATCG 58.771 50.000 0.00 0.00 41.33 3.84
188 198 3.242091 CGTGAGTCAATATTTGCACCTCG 60.242 47.826 0.00 0.00 0.00 4.63
229 239 5.948758 TGATTATGTTACTGCAAATGGTGGA 59.051 36.000 0.00 0.00 0.00 4.02
230 240 6.206395 TGATTATGTTACTGCAAATGGTGG 57.794 37.500 0.00 0.00 0.00 4.61
252 262 1.673033 GGGTGGTGAGTGAGACGATTG 60.673 57.143 0.00 0.00 0.00 2.67
264 288 0.253044 GATTAGCTGCTGGGTGGTGA 59.747 55.000 13.43 0.00 0.00 4.02
267 291 0.465097 CTGGATTAGCTGCTGGGTGG 60.465 60.000 13.43 0.00 0.00 4.61
269 293 0.835941 CTCTGGATTAGCTGCTGGGT 59.164 55.000 13.43 0.00 0.00 4.51
270 294 0.534652 GCTCTGGATTAGCTGCTGGG 60.535 60.000 13.43 0.00 37.01 4.45
271 295 0.879400 CGCTCTGGATTAGCTGCTGG 60.879 60.000 13.43 0.00 37.85 4.85
272 296 0.103755 TCGCTCTGGATTAGCTGCTG 59.896 55.000 13.43 0.00 37.85 4.41
273 297 0.826715 TTCGCTCTGGATTAGCTGCT 59.173 50.000 7.57 7.57 37.85 4.24
274 298 1.876322 ATTCGCTCTGGATTAGCTGC 58.124 50.000 0.00 0.00 37.85 5.25
275 299 4.624882 GTCATATTCGCTCTGGATTAGCTG 59.375 45.833 0.00 0.00 37.85 4.24
276 300 4.281941 TGTCATATTCGCTCTGGATTAGCT 59.718 41.667 0.00 0.00 37.85 3.32
277 301 4.560128 TGTCATATTCGCTCTGGATTAGC 58.440 43.478 0.00 0.00 36.60 3.09
283 401 3.126831 GACCTTGTCATATTCGCTCTGG 58.873 50.000 0.00 0.00 32.09 3.86
304 427 0.037303 ATTGCACCTGACCTGACCTG 59.963 55.000 0.00 0.00 0.00 4.00
305 428 0.037303 CATTGCACCTGACCTGACCT 59.963 55.000 0.00 0.00 0.00 3.85
306 429 0.962356 CCATTGCACCTGACCTGACC 60.962 60.000 0.00 0.00 0.00 4.02
307 430 0.036732 TCCATTGCACCTGACCTGAC 59.963 55.000 0.00 0.00 0.00 3.51
308 431 0.036732 GTCCATTGCACCTGACCTGA 59.963 55.000 0.00 0.00 0.00 3.86
309 432 0.962356 GGTCCATTGCACCTGACCTG 60.962 60.000 16.65 0.00 43.16 4.00
310 433 1.380302 GGTCCATTGCACCTGACCT 59.620 57.895 16.65 0.00 43.16 3.85
311 434 0.678048 GAGGTCCATTGCACCTGACC 60.678 60.000 3.36 16.32 44.87 4.02
312 435 0.036732 TGAGGTCCATTGCACCTGAC 59.963 55.000 3.36 0.00 44.87 3.51
313 436 0.770499 TTGAGGTCCATTGCACCTGA 59.230 50.000 3.36 0.00 44.87 3.86
347 470 3.937311 GGTGAGCCAAGCTTAATTAGCCT 60.937 47.826 0.00 0.00 42.03 4.58
362 485 2.095059 CACTGCACTTAAATGGTGAGCC 60.095 50.000 0.00 0.00 36.89 4.70
374 505 2.903784 TGGTATACACTCCACTGCACTT 59.096 45.455 5.01 0.00 0.00 3.16
402 533 3.550437 ATGATCAAGTGGGAGTAGTGC 57.450 47.619 0.00 0.00 0.00 4.40
404 535 6.875972 AAGTAATGATCAAGTGGGAGTAGT 57.124 37.500 0.00 0.00 0.00 2.73
457 595 8.198778 TGATCATGAAAAATCATGGTGGTAATG 58.801 33.333 16.36 0.00 45.43 1.90
475 613 6.128742 CGAAATATGCGAATCTGTGATCATGA 60.129 38.462 0.00 0.00 0.00 3.07
591 739 5.059404 TCGGAAATCCTTTCAGATTTTGC 57.941 39.130 1.41 0.00 44.52 3.68
599 747 5.009210 ACGTGAAATTTCGGAAATCCTTTCA 59.991 36.000 19.24 19.24 41.43 2.69
636 784 6.713792 TTTCAGAAACGAAAAACTTTTGGG 57.286 33.333 0.00 0.00 32.05 4.12
701 852 4.171005 CAAAATGCAGGAATGCTACACTG 58.829 43.478 1.53 0.00 35.49 3.66
708 859 2.613691 CTCCACAAAATGCAGGAATGC 58.386 47.619 0.00 0.00 0.00 3.56
753 909 2.824041 CGGATGCCGTCCCTTTGG 60.824 66.667 0.00 0.00 44.77 3.28
758 918 2.822701 GTTTCCGGATGCCGTCCC 60.823 66.667 4.15 0.00 46.80 4.46
759 919 2.046700 TGTTTCCGGATGCCGTCC 60.047 61.111 4.15 0.00 46.80 4.79
760 920 1.359459 GACTGTTTCCGGATGCCGTC 61.359 60.000 4.15 9.63 46.80 4.79
761 921 1.375523 GACTGTTTCCGGATGCCGT 60.376 57.895 4.15 3.56 46.80 5.68
788 948 0.320421 GGGAACGTGCTCTGCTTACA 60.320 55.000 0.00 0.00 0.00 2.41
790 950 1.192146 AGGGGAACGTGCTCTGCTTA 61.192 55.000 0.00 0.00 0.00 3.09
801 961 1.004918 AGAACGAAGCAGGGGAACG 60.005 57.895 0.00 0.00 0.00 3.95
802 962 0.321996 AGAGAACGAAGCAGGGGAAC 59.678 55.000 0.00 0.00 0.00 3.62
842 1027 1.097232 GGTTTTATACCGGTGGCACC 58.903 55.000 26.95 26.95 37.12 5.01
928 1680 2.569404 TGGAAGAAGAAGGAGGAGAAGC 59.431 50.000 0.00 0.00 0.00 3.86
937 1689 1.014564 GGCGACGTGGAAGAAGAAGG 61.015 60.000 0.11 0.00 0.00 3.46
1146 1934 1.133253 CTTCTCGTCGGCGTCGTTA 59.867 57.895 24.03 12.01 39.49 3.18
1701 2963 0.534873 TCGAGCACCATGAATCGGAA 59.465 50.000 0.00 0.00 35.91 4.30
1754 3017 0.527565 AATCCATCGTTGCCACTTGC 59.472 50.000 0.00 0.00 41.77 4.01
1755 3018 1.811965 TCAATCCATCGTTGCCACTTG 59.188 47.619 0.00 0.00 0.00 3.16
1758 3021 2.016318 TGATCAATCCATCGTTGCCAC 58.984 47.619 0.00 0.00 0.00 5.01
1759 3022 2.016318 GTGATCAATCCATCGTTGCCA 58.984 47.619 0.00 0.00 0.00 4.92
1760 3023 1.334869 GGTGATCAATCCATCGTTGCC 59.665 52.381 0.00 0.00 0.00 4.52
1824 3122 2.126580 GAACGAGACCCGACCACG 60.127 66.667 0.00 0.00 41.76 4.94
1825 3123 2.260743 GGAACGAGACCCGACCAC 59.739 66.667 0.00 0.00 41.76 4.16
1857 3155 4.457834 ACCGTTTCTCAATCCTACAGAG 57.542 45.455 0.00 0.00 0.00 3.35
1901 3200 1.482593 CGGCCATCTAAGTTCAGACCT 59.517 52.381 2.24 0.00 0.00 3.85
1910 3209 3.310774 CACATCTTTCACGGCCATCTAAG 59.689 47.826 2.24 0.61 0.00 2.18
1938 3241 3.891977 TGGATTCGAACCCAAACATTTGA 59.108 39.130 9.44 0.00 40.55 2.69
1953 3256 2.415893 GCACCCATTTTGACTGGATTCG 60.416 50.000 0.00 0.00 35.70 3.34
1970 3287 4.764679 TGAACATCTACAAACATGCACC 57.235 40.909 0.00 0.00 0.00 5.01
1971 3288 6.489675 CCTATGAACATCTACAAACATGCAC 58.510 40.000 0.00 0.00 0.00 4.57
1978 3295 3.202906 GGCGCCTATGAACATCTACAAA 58.797 45.455 22.15 0.00 0.00 2.83
2006 3324 2.482839 CGACCCAAGCCACACAAAATTT 60.483 45.455 0.00 0.00 0.00 1.82
2074 3416 3.426560 CCCGCCAACGATAAAAACTAACC 60.427 47.826 0.00 0.00 43.93 2.85
2155 3502 2.030371 TCAACTTGCAGGCATGTTTGA 58.970 42.857 19.13 16.57 40.68 2.69
2240 3593 9.982291 CTTCAAATTTGCATCTTTTATTGGATG 57.018 29.630 13.54 0.00 41.36 3.51
2289 3692 1.649664 ACATCATCTGCTCGAGTTGC 58.350 50.000 15.13 0.48 0.00 4.17
2296 3699 9.478768 CATCTCCAATATATACATCATCTGCTC 57.521 37.037 0.00 0.00 0.00 4.26
2311 3714 8.562892 CGAATTGCTCTTTTACATCTCCAATAT 58.437 33.333 0.00 0.00 0.00 1.28
2312 3715 7.768582 TCGAATTGCTCTTTTACATCTCCAATA 59.231 33.333 0.00 0.00 0.00 1.90
2313 3716 6.599244 TCGAATTGCTCTTTTACATCTCCAAT 59.401 34.615 0.00 0.00 0.00 3.16
2314 3717 5.937540 TCGAATTGCTCTTTTACATCTCCAA 59.062 36.000 0.00 0.00 0.00 3.53
2315 3718 5.487433 TCGAATTGCTCTTTTACATCTCCA 58.513 37.500 0.00 0.00 0.00 3.86
2316 3719 5.582665 ACTCGAATTGCTCTTTTACATCTCC 59.417 40.000 0.00 0.00 0.00 3.71
2317 3720 6.654793 ACTCGAATTGCTCTTTTACATCTC 57.345 37.500 0.00 0.00 0.00 2.75
2318 3721 7.548097 TCTACTCGAATTGCTCTTTTACATCT 58.452 34.615 0.00 0.00 0.00 2.90
2319 3722 7.757097 TCTACTCGAATTGCTCTTTTACATC 57.243 36.000 0.00 0.00 0.00 3.06
2320 3723 7.981789 TCATCTACTCGAATTGCTCTTTTACAT 59.018 33.333 0.00 0.00 0.00 2.29
2321 3724 7.320399 TCATCTACTCGAATTGCTCTTTTACA 58.680 34.615 0.00 0.00 0.00 2.41
2322 3725 7.757097 TCATCTACTCGAATTGCTCTTTTAC 57.243 36.000 0.00 0.00 0.00 2.01
2323 3726 7.981789 ACATCATCTACTCGAATTGCTCTTTTA 59.018 33.333 0.00 0.00 0.00 1.52
2324 3727 6.820656 ACATCATCTACTCGAATTGCTCTTTT 59.179 34.615 0.00 0.00 0.00 2.27
2325 3728 6.344500 ACATCATCTACTCGAATTGCTCTTT 58.656 36.000 0.00 0.00 0.00 2.52
2326 3729 5.911752 ACATCATCTACTCGAATTGCTCTT 58.088 37.500 0.00 0.00 0.00 2.85
2327 3730 5.528043 ACATCATCTACTCGAATTGCTCT 57.472 39.130 0.00 0.00 0.00 4.09
2352 3755 8.854117 GGAATTGCTCTTTTACATCTCCAATAT 58.146 33.333 0.00 0.00 0.00 1.28
2375 3778 4.143543 TCACTTTGCATCATCTGTTGGAA 58.856 39.130 0.00 0.00 0.00 3.53
2381 3784 5.562506 ACATCTTCACTTTGCATCATCTG 57.437 39.130 0.00 0.00 0.00 2.90
2387 3790 5.460646 CGGTTTTACATCTTCACTTTGCAT 58.539 37.500 0.00 0.00 0.00 3.96
2397 3800 1.310216 GGCGGCCGGTTTTACATCTT 61.310 55.000 29.38 0.00 0.00 2.40
2417 3820 0.456482 TTGTACACATCCGTACGGCG 60.456 55.000 29.64 23.39 43.89 6.46
2420 3823 4.093998 AGACTAGTTGTACACATCCGTACG 59.906 45.833 8.69 8.69 43.89 3.67
2422 3825 4.142534 GCAGACTAGTTGTACACATCCGTA 60.143 45.833 0.00 0.00 0.00 4.02
2423 3826 3.367087 GCAGACTAGTTGTACACATCCGT 60.367 47.826 0.00 0.00 0.00 4.69
2424 3827 3.179830 GCAGACTAGTTGTACACATCCG 58.820 50.000 0.00 0.00 0.00 4.18
2427 3830 5.405935 TCATGCAGACTAGTTGTACACAT 57.594 39.130 0.00 0.00 0.00 3.21
2456 3859 1.447838 TCTTTCGATGCTCGGCCAC 60.448 57.895 2.24 0.00 40.88 5.01
2466 3869 0.970937 TGCTCCTCCCGTCTTTCGAT 60.971 55.000 0.00 0.00 42.86 3.59
2467 3870 1.605451 TGCTCCTCCCGTCTTTCGA 60.605 57.895 0.00 0.00 42.86 3.71
2471 3874 3.382832 CGGTGCTCCTCCCGTCTT 61.383 66.667 2.85 0.00 39.38 3.01
2541 3944 2.203126 CTGGCCATTCGAGCTCCC 60.203 66.667 5.51 2.57 0.00 4.30
2621 4024 2.182030 CAGACCCGACCTTCTCGC 59.818 66.667 0.00 0.00 41.46 5.03
2651 4055 1.530013 CCTACCTCCACACCGTCGTT 61.530 60.000 0.00 0.00 0.00 3.85
2652 4056 1.975407 CCTACCTCCACACCGTCGT 60.975 63.158 0.00 0.00 0.00 4.34
2655 4059 1.152398 ACACCTACCTCCACACCGT 60.152 57.895 0.00 0.00 0.00 4.83
2659 4063 2.579657 CCGCACACCTACCTCCACA 61.580 63.158 0.00 0.00 0.00 4.17
2667 4071 1.141019 GATTCGAGCCGCACACCTA 59.859 57.895 0.00 0.00 0.00 3.08
2669 4073 2.125512 AGATTCGAGCCGCACACC 60.126 61.111 0.00 0.00 0.00 4.16
2676 4080 2.956964 CGCCGTCAGATTCGAGCC 60.957 66.667 0.00 0.00 0.00 4.70
2699 4103 3.682292 ATTTGAGCTCCCCGACCGC 62.682 63.158 12.15 0.00 0.00 5.68
2700 4104 1.521681 GATTTGAGCTCCCCGACCG 60.522 63.158 12.15 0.00 0.00 4.79
2703 4107 0.464373 GCATGATTTGAGCTCCCCGA 60.464 55.000 12.15 0.00 0.00 5.14
2704 4108 1.779025 CGCATGATTTGAGCTCCCCG 61.779 60.000 12.15 0.00 0.00 5.73
2705 4109 1.450531 CCGCATGATTTGAGCTCCCC 61.451 60.000 12.15 0.00 0.00 4.81
2706 4110 2.028130 CCGCATGATTTGAGCTCCC 58.972 57.895 12.15 0.00 0.00 4.30
2707 4111 1.358046 GCCGCATGATTTGAGCTCC 59.642 57.895 12.15 0.00 0.00 4.70
2708 4112 1.010350 CGCCGCATGATTTGAGCTC 60.010 57.895 6.82 6.82 0.00 4.09
2709 4113 2.475466 CCGCCGCATGATTTGAGCT 61.475 57.895 0.00 0.00 0.00 4.09
2710 4114 2.025156 CCGCCGCATGATTTGAGC 59.975 61.111 0.00 0.00 0.00 4.26
2711 4115 2.025156 GCCGCCGCATGATTTGAG 59.975 61.111 0.00 0.00 34.03 3.02
2712 4116 3.875039 CGCCGCCGCATGATTTGA 61.875 61.111 0.00 0.00 34.03 2.69
2713 4117 2.666715 AATCGCCGCCGCATGATTTG 62.667 55.000 0.00 0.00 34.03 2.32
2714 4118 2.392613 GAATCGCCGCCGCATGATTT 62.393 55.000 0.00 0.00 31.56 2.17
2715 4119 2.896801 GAATCGCCGCCGCATGATT 61.897 57.895 0.00 0.00 33.96 2.57
2716 4120 3.349006 GAATCGCCGCCGCATGAT 61.349 61.111 0.00 0.00 34.03 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.