Multiple sequence alignment - TraesCS1A01G324900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G324900 chr1A 100.000 4988 0 0 1 4988 515592366 515587379 0.000000e+00 9212.0
1 TraesCS1A01G324900 chr1A 82.192 146 19 6 675 816 128640454 128640312 8.770000e-23 119.0
2 TraesCS1A01G324900 chr1B 90.815 2700 162 28 2347 4988 565850826 565848155 0.000000e+00 3533.0
3 TraesCS1A01G324900 chr1B 90.613 2674 153 32 2347 4988 565810878 565808271 0.000000e+00 3458.0
4 TraesCS1A01G324900 chr1B 88.832 1173 74 27 1032 2179 565851950 565850810 0.000000e+00 1387.0
5 TraesCS1A01G324900 chr1B 92.552 819 45 8 1374 2179 565811677 565810862 0.000000e+00 1160.0
6 TraesCS1A01G324900 chr1B 90.054 372 29 2 1011 1382 565820459 565820096 4.520000e-130 475.0
7 TraesCS1A01G324900 chr1B 98.295 176 3 0 2176 2351 29902384 29902559 4.850000e-80 309.0
8 TraesCS1A01G324900 chr1B 98.295 176 3 0 2176 2351 29909340 29909515 4.850000e-80 309.0
9 TraesCS1A01G324900 chr1B 79.444 180 21 13 697 868 537652559 537652730 4.080000e-21 113.0
10 TraesCS1A01G324900 chr1D 93.027 2438 106 16 2347 4750 418241666 418239259 0.000000e+00 3502.0
11 TraesCS1A01G324900 chr1D 90.691 752 45 15 915 1646 418243190 418242444 0.000000e+00 977.0
12 TraesCS1A01G324900 chr1D 97.137 489 12 2 1693 2179 418242138 418241650 0.000000e+00 824.0
13 TraesCS1A01G324900 chr1D 80.519 77 12 3 675 748 364035365 364035441 6.980000e-04 56.5
14 TraesCS1A01G324900 chr4B 87.276 2012 151 41 2612 4580 109922124 109924073 0.000000e+00 2200.0
15 TraesCS1A01G324900 chr4B 94.611 501 25 2 1679 2179 109921418 109921916 0.000000e+00 774.0
16 TraesCS1A01G324900 chr4B 86.531 245 21 8 999 1243 109920818 109921050 4.950000e-65 259.0
17 TraesCS1A01G324900 chr4B 84.810 158 17 4 1349 1499 109921059 109921216 8.650000e-33 152.0
18 TraesCS1A01G324900 chr4B 90.361 83 4 3 1479 1560 109921276 109921355 6.830000e-19 106.0
19 TraesCS1A01G324900 chr4B 89.362 47 3 2 675 719 87952417 87952371 1.940000e-04 58.4
20 TraesCS1A01G324900 chr6B 99.415 171 1 0 2178 2348 52572444 52572614 1.350000e-80 311.0
21 TraesCS1A01G324900 chr5A 97.790 181 2 1 2178 2356 346188253 346188433 1.350000e-80 311.0
22 TraesCS1A01G324900 chr5A 96.721 183 4 1 2166 2346 85859281 85859099 2.260000e-78 303.0
23 TraesCS1A01G324900 chr2A 99.415 171 1 0 2179 2349 65400329 65400499 1.350000e-80 311.0
24 TraesCS1A01G324900 chrUn 99.412 170 1 0 2179 2348 48495356 48495525 4.850000e-80 309.0
25 TraesCS1A01G324900 chr2B 98.295 176 3 0 2178 2353 244915600 244915775 4.850000e-80 309.0
26 TraesCS1A01G324900 chr2B 85.333 75 8 2 1581 1655 3472276 3472205 1.930000e-09 75.0
27 TraesCS1A01G324900 chr2B 77.660 94 18 3 710 802 585707525 585707616 3.000000e-03 54.7
28 TraesCS1A01G324900 chr3B 94.975 199 3 7 2148 2346 689002667 689002858 6.270000e-79 305.0
29 TraesCS1A01G324900 chr3B 83.333 102 11 4 1569 1665 481619951 481620051 6.880000e-14 89.8
30 TraesCS1A01G324900 chr3B 96.875 32 1 0 713 744 772221724 772221693 3.000000e-03 54.7
31 TraesCS1A01G324900 chr3B 96.875 32 1 0 713 744 772234618 772234587 3.000000e-03 54.7
32 TraesCS1A01G324900 chr6A 81.481 135 19 6 684 816 63097889 63097759 6.830000e-19 106.0
33 TraesCS1A01G324900 chr4D 87.059 85 8 2 1579 1661 48537861 48537944 5.320000e-15 93.5
34 TraesCS1A01G324900 chr3D 82.353 102 12 4 1569 1665 370110011 370110111 3.200000e-12 84.2
35 TraesCS1A01G324900 chr6D 79.825 114 17 5 675 785 461457161 461457051 1.490000e-10 78.7
36 TraesCS1A01G324900 chr2D 82.955 88 8 4 1579 1660 313635376 313635462 6.930000e-09 73.1
37 TraesCS1A01G324900 chr2D 79.570 93 14 4 659 747 110961696 110961787 1.500000e-05 62.1
38 TraesCS1A01G324900 chr7A 84.932 73 7 2 1575 1647 626892658 626892590 2.490000e-08 71.3
39 TraesCS1A01G324900 chr4A 86.667 60 6 1 662 719 691117020 691116961 1.160000e-06 65.8
40 TraesCS1A01G324900 chr3A 88.889 45 4 1 673 716 14856139 14856183 3.000000e-03 54.7
41 TraesCS1A01G324900 chr5D 87.234 47 5 1 656 702 478211205 478211160 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G324900 chr1A 515587379 515592366 4987 True 9212.000000 9212 100.000000 1 4988 1 chr1A.!!$R2 4987
1 TraesCS1A01G324900 chr1B 565848155 565851950 3795 True 2460.000000 3533 89.823500 1032 4988 2 chr1B.!!$R3 3956
2 TraesCS1A01G324900 chr1B 565808271 565811677 3406 True 2309.000000 3458 91.582500 1374 4988 2 chr1B.!!$R2 3614
3 TraesCS1A01G324900 chr1D 418239259 418243190 3931 True 1767.666667 3502 93.618333 915 4750 3 chr1D.!!$R1 3835
4 TraesCS1A01G324900 chr4B 109920818 109924073 3255 False 698.200000 2200 88.717800 999 4580 5 chr4B.!!$F1 3581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
55 56 1.042229 TCTCGGGTTTCTCGGTTTCA 58.958 50.000 0.00 0.0 0.00 2.69 F
56 57 1.621814 TCTCGGGTTTCTCGGTTTCAT 59.378 47.619 0.00 0.0 0.00 2.57 F
1227 1247 1.076265 GGGCCCTTATTGGTGACCC 60.076 63.158 17.04 0.0 30.57 4.46 F
2233 2619 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.0 37.19 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1227 1247 0.399454 CACAGATAGGGATGGGCAGG 59.601 60.000 0.00 0.0 0.00 4.85 R
1494 1583 1.134551 GGGCTGCTCCTAAGAACTCTG 60.135 57.143 0.00 0.0 34.39 3.35 R
2244 2630 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.0 40.08 4.58 R
4097 4526 0.242825 CAGAGTACTCCAAACGGCGA 59.757 55.000 19.38 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.902224 CTTTTTCTTGGTTTTCATCGGTTT 57.098 33.333 0.00 0.00 0.00 3.27
24 25 6.895607 TTTTTCTTGGTTTTCATCGGTTTC 57.104 33.333 0.00 0.00 0.00 2.78
25 26 4.577834 TTCTTGGTTTTCATCGGTTTCC 57.422 40.909 0.00 0.00 0.00 3.13
26 27 3.827722 TCTTGGTTTTCATCGGTTTCCT 58.172 40.909 0.00 0.00 0.00 3.36
27 28 4.211920 TCTTGGTTTTCATCGGTTTCCTT 58.788 39.130 0.00 0.00 0.00 3.36
28 29 4.277423 TCTTGGTTTTCATCGGTTTCCTTC 59.723 41.667 0.00 0.00 0.00 3.46
29 30 3.556999 TGGTTTTCATCGGTTTCCTTCA 58.443 40.909 0.00 0.00 0.00 3.02
30 31 4.148838 TGGTTTTCATCGGTTTCCTTCAT 58.851 39.130 0.00 0.00 0.00 2.57
31 32 4.586841 TGGTTTTCATCGGTTTCCTTCATT 59.413 37.500 0.00 0.00 0.00 2.57
32 33 5.069781 TGGTTTTCATCGGTTTCCTTCATTT 59.930 36.000 0.00 0.00 0.00 2.32
33 34 5.633601 GGTTTTCATCGGTTTCCTTCATTTC 59.366 40.000 0.00 0.00 0.00 2.17
34 35 6.447162 GTTTTCATCGGTTTCCTTCATTTCT 58.553 36.000 0.00 0.00 0.00 2.52
35 36 6.648879 TTTCATCGGTTTCCTTCATTTCTT 57.351 33.333 0.00 0.00 0.00 2.52
36 37 6.648879 TTCATCGGTTTCCTTCATTTCTTT 57.351 33.333 0.00 0.00 0.00 2.52
37 38 6.254281 TCATCGGTTTCCTTCATTTCTTTC 57.746 37.500 0.00 0.00 0.00 2.62
38 39 6.003950 TCATCGGTTTCCTTCATTTCTTTCT 58.996 36.000 0.00 0.00 0.00 2.52
39 40 5.941948 TCGGTTTCCTTCATTTCTTTCTC 57.058 39.130 0.00 0.00 0.00 2.87
40 41 4.451096 TCGGTTTCCTTCATTTCTTTCTCG 59.549 41.667 0.00 0.00 0.00 4.04
41 42 4.378459 CGGTTTCCTTCATTTCTTTCTCGG 60.378 45.833 0.00 0.00 0.00 4.63
42 43 4.082733 GGTTTCCTTCATTTCTTTCTCGGG 60.083 45.833 0.00 0.00 0.00 5.14
43 44 4.367039 TTCCTTCATTTCTTTCTCGGGT 57.633 40.909 0.00 0.00 0.00 5.28
44 45 4.367039 TCCTTCATTTCTTTCTCGGGTT 57.633 40.909 0.00 0.00 0.00 4.11
45 46 4.725490 TCCTTCATTTCTTTCTCGGGTTT 58.275 39.130 0.00 0.00 0.00 3.27
46 47 4.760204 TCCTTCATTTCTTTCTCGGGTTTC 59.240 41.667 0.00 0.00 0.00 2.78
47 48 4.762251 CCTTCATTTCTTTCTCGGGTTTCT 59.238 41.667 0.00 0.00 0.00 2.52
48 49 5.106515 CCTTCATTTCTTTCTCGGGTTTCTC 60.107 44.000 0.00 0.00 0.00 2.87
49 50 3.994392 TCATTTCTTTCTCGGGTTTCTCG 59.006 43.478 0.00 0.00 0.00 4.04
50 51 2.450609 TTCTTTCTCGGGTTTCTCGG 57.549 50.000 0.00 0.00 0.00 4.63
51 52 1.335145 TCTTTCTCGGGTTTCTCGGT 58.665 50.000 0.00 0.00 0.00 4.69
52 53 1.690352 TCTTTCTCGGGTTTCTCGGTT 59.310 47.619 0.00 0.00 0.00 4.44
53 54 2.103601 TCTTTCTCGGGTTTCTCGGTTT 59.896 45.455 0.00 0.00 0.00 3.27
54 55 2.159327 TTCTCGGGTTTCTCGGTTTC 57.841 50.000 0.00 0.00 0.00 2.78
55 56 1.042229 TCTCGGGTTTCTCGGTTTCA 58.958 50.000 0.00 0.00 0.00 2.69
56 57 1.621814 TCTCGGGTTTCTCGGTTTCAT 59.378 47.619 0.00 0.00 0.00 2.57
57 58 2.038033 TCTCGGGTTTCTCGGTTTCATT 59.962 45.455 0.00 0.00 0.00 2.57
58 59 3.258872 TCTCGGGTTTCTCGGTTTCATTA 59.741 43.478 0.00 0.00 0.00 1.90
59 60 3.328505 TCGGGTTTCTCGGTTTCATTAC 58.671 45.455 0.00 0.00 0.00 1.89
60 61 3.007182 TCGGGTTTCTCGGTTTCATTACT 59.993 43.478 0.00 0.00 0.00 2.24
61 62 3.749609 CGGGTTTCTCGGTTTCATTACTT 59.250 43.478 0.00 0.00 0.00 2.24
62 63 4.214758 CGGGTTTCTCGGTTTCATTACTTT 59.785 41.667 0.00 0.00 0.00 2.66
63 64 5.458015 GGGTTTCTCGGTTTCATTACTTTG 58.542 41.667 0.00 0.00 0.00 2.77
64 65 4.915667 GGTTTCTCGGTTTCATTACTTTGC 59.084 41.667 0.00 0.00 0.00 3.68
65 66 5.506649 GGTTTCTCGGTTTCATTACTTTGCA 60.507 40.000 0.00 0.00 0.00 4.08
66 67 5.957842 TTCTCGGTTTCATTACTTTGCAT 57.042 34.783 0.00 0.00 0.00 3.96
67 68 5.545658 TCTCGGTTTCATTACTTTGCATC 57.454 39.130 0.00 0.00 0.00 3.91
68 69 4.092821 TCTCGGTTTCATTACTTTGCATCG 59.907 41.667 0.00 0.00 0.00 3.84
69 70 3.126171 TCGGTTTCATTACTTTGCATCGG 59.874 43.478 0.00 0.00 0.00 4.18
70 71 3.119990 CGGTTTCATTACTTTGCATCGGT 60.120 43.478 0.00 0.00 0.00 4.69
71 72 4.614993 CGGTTTCATTACTTTGCATCGGTT 60.615 41.667 0.00 0.00 0.00 4.44
72 73 5.227152 GGTTTCATTACTTTGCATCGGTTT 58.773 37.500 0.00 0.00 0.00 3.27
73 74 5.344933 GGTTTCATTACTTTGCATCGGTTTC 59.655 40.000 0.00 0.00 0.00 2.78
74 75 5.957842 TTCATTACTTTGCATCGGTTTCT 57.042 34.783 0.00 0.00 0.00 2.52
75 76 5.957842 TCATTACTTTGCATCGGTTTCTT 57.042 34.783 0.00 0.00 0.00 2.52
76 77 6.325919 TCATTACTTTGCATCGGTTTCTTT 57.674 33.333 0.00 0.00 0.00 2.52
77 78 6.744112 TCATTACTTTGCATCGGTTTCTTTT 58.256 32.000 0.00 0.00 0.00 2.27
78 79 6.640499 TCATTACTTTGCATCGGTTTCTTTTG 59.360 34.615 0.00 0.00 0.00 2.44
79 80 4.385358 ACTTTGCATCGGTTTCTTTTGT 57.615 36.364 0.00 0.00 0.00 2.83
80 81 4.754322 ACTTTGCATCGGTTTCTTTTGTT 58.246 34.783 0.00 0.00 0.00 2.83
81 82 5.175127 ACTTTGCATCGGTTTCTTTTGTTT 58.825 33.333 0.00 0.00 0.00 2.83
82 83 5.641636 ACTTTGCATCGGTTTCTTTTGTTTT 59.358 32.000 0.00 0.00 0.00 2.43
83 84 6.148645 ACTTTGCATCGGTTTCTTTTGTTTTT 59.851 30.769 0.00 0.00 0.00 1.94
84 85 5.462034 TGCATCGGTTTCTTTTGTTTTTG 57.538 34.783 0.00 0.00 0.00 2.44
85 86 4.932200 TGCATCGGTTTCTTTTGTTTTTGT 59.068 33.333 0.00 0.00 0.00 2.83
86 87 5.409826 TGCATCGGTTTCTTTTGTTTTTGTT 59.590 32.000 0.00 0.00 0.00 2.83
87 88 6.073003 TGCATCGGTTTCTTTTGTTTTTGTTT 60.073 30.769 0.00 0.00 0.00 2.83
88 89 6.799441 GCATCGGTTTCTTTTGTTTTTGTTTT 59.201 30.769 0.00 0.00 0.00 2.43
89 90 7.007009 GCATCGGTTTCTTTTGTTTTTGTTTTC 59.993 33.333 0.00 0.00 0.00 2.29
90 91 7.716768 TCGGTTTCTTTTGTTTTTGTTTTCT 57.283 28.000 0.00 0.00 0.00 2.52
91 92 8.144155 TCGGTTTCTTTTGTTTTTGTTTTCTT 57.856 26.923 0.00 0.00 0.00 2.52
92 93 8.613482 TCGGTTTCTTTTGTTTTTGTTTTCTTT 58.387 25.926 0.00 0.00 0.00 2.52
93 94 8.677635 CGGTTTCTTTTGTTTTTGTTTTCTTTG 58.322 29.630 0.00 0.00 0.00 2.77
94 95 9.509855 GGTTTCTTTTGTTTTTGTTTTCTTTGT 57.490 25.926 0.00 0.00 0.00 2.83
113 114 9.723447 TTCTTTGTTTTTCTTTTTGGTTTTCAC 57.277 25.926 0.00 0.00 0.00 3.18
114 115 9.114952 TCTTTGTTTTTCTTTTTGGTTTTCACT 57.885 25.926 0.00 0.00 0.00 3.41
115 116 9.168353 CTTTGTTTTTCTTTTTGGTTTTCACTG 57.832 29.630 0.00 0.00 0.00 3.66
116 117 7.195839 TGTTTTTCTTTTTGGTTTTCACTGG 57.804 32.000 0.00 0.00 0.00 4.00
117 118 6.205658 TGTTTTTCTTTTTGGTTTTCACTGGG 59.794 34.615 0.00 0.00 0.00 4.45
118 119 3.535280 TCTTTTTGGTTTTCACTGGGC 57.465 42.857 0.00 0.00 0.00 5.36
119 120 3.103742 TCTTTTTGGTTTTCACTGGGCT 58.896 40.909 0.00 0.00 0.00 5.19
120 121 3.517500 TCTTTTTGGTTTTCACTGGGCTT 59.482 39.130 0.00 0.00 0.00 4.35
121 122 3.535280 TTTTGGTTTTCACTGGGCTTC 57.465 42.857 0.00 0.00 0.00 3.86
122 123 2.452600 TTGGTTTTCACTGGGCTTCT 57.547 45.000 0.00 0.00 0.00 2.85
123 124 2.452600 TGGTTTTCACTGGGCTTCTT 57.547 45.000 0.00 0.00 0.00 2.52
124 125 2.745968 TGGTTTTCACTGGGCTTCTTT 58.254 42.857 0.00 0.00 0.00 2.52
125 126 2.430332 TGGTTTTCACTGGGCTTCTTTG 59.570 45.455 0.00 0.00 0.00 2.77
126 127 2.224042 GGTTTTCACTGGGCTTCTTTGG 60.224 50.000 0.00 0.00 0.00 3.28
127 128 2.430694 GTTTTCACTGGGCTTCTTTGGT 59.569 45.455 0.00 0.00 0.00 3.67
128 129 3.586470 TTTCACTGGGCTTCTTTGGTA 57.414 42.857 0.00 0.00 0.00 3.25
129 130 3.806949 TTCACTGGGCTTCTTTGGTAT 57.193 42.857 0.00 0.00 0.00 2.73
130 131 3.806949 TCACTGGGCTTCTTTGGTATT 57.193 42.857 0.00 0.00 0.00 1.89
131 132 3.686016 TCACTGGGCTTCTTTGGTATTC 58.314 45.455 0.00 0.00 0.00 1.75
132 133 2.755103 CACTGGGCTTCTTTGGTATTCC 59.245 50.000 0.00 0.00 0.00 3.01
133 134 2.649816 ACTGGGCTTCTTTGGTATTCCT 59.350 45.455 0.00 0.00 34.23 3.36
134 135 3.076032 ACTGGGCTTCTTTGGTATTCCTT 59.924 43.478 0.00 0.00 34.23 3.36
135 136 3.430453 TGGGCTTCTTTGGTATTCCTTG 58.570 45.455 0.00 0.00 34.23 3.61
136 137 3.181423 TGGGCTTCTTTGGTATTCCTTGT 60.181 43.478 0.00 0.00 34.23 3.16
137 138 3.832490 GGGCTTCTTTGGTATTCCTTGTT 59.168 43.478 0.00 0.00 34.23 2.83
138 139 4.283467 GGGCTTCTTTGGTATTCCTTGTTT 59.717 41.667 0.00 0.00 34.23 2.83
139 140 5.221641 GGGCTTCTTTGGTATTCCTTGTTTT 60.222 40.000 0.00 0.00 34.23 2.43
140 141 6.288294 GGCTTCTTTGGTATTCCTTGTTTTT 58.712 36.000 0.00 0.00 34.23 1.94
317 318 9.627395 TGGGTTTTGTTTCATACATATTTTACG 57.373 29.630 0.00 0.00 36.44 3.18
318 319 9.628746 GGGTTTTGTTTCATACATATTTTACGT 57.371 29.630 0.00 0.00 36.44 3.57
360 361 9.744468 AATACATTTTCCTAACACAAGTTTCAC 57.256 29.630 0.00 0.00 39.15 3.18
361 362 7.164230 ACATTTTCCTAACACAAGTTTCACA 57.836 32.000 0.00 0.00 39.15 3.58
362 363 7.781056 ACATTTTCCTAACACAAGTTTCACAT 58.219 30.769 0.00 0.00 39.15 3.21
363 364 7.920682 ACATTTTCCTAACACAAGTTTCACATC 59.079 33.333 0.00 0.00 39.15 3.06
364 365 7.639113 TTTTCCTAACACAAGTTTCACATCT 57.361 32.000 0.00 0.00 39.15 2.90
365 366 7.639113 TTTCCTAACACAAGTTTCACATCTT 57.361 32.000 0.00 0.00 39.15 2.40
366 367 7.639113 TTCCTAACACAAGTTTCACATCTTT 57.361 32.000 0.00 0.00 39.15 2.52
367 368 7.259290 TCCTAACACAAGTTTCACATCTTTC 57.741 36.000 0.00 0.00 39.15 2.62
368 369 6.826231 TCCTAACACAAGTTTCACATCTTTCA 59.174 34.615 0.00 0.00 39.15 2.69
369 370 7.338196 TCCTAACACAAGTTTCACATCTTTCAA 59.662 33.333 0.00 0.00 39.15 2.69
370 371 7.973388 CCTAACACAAGTTTCACATCTTTCAAA 59.027 33.333 0.00 0.00 39.15 2.69
371 372 7.581011 AACACAAGTTTCACATCTTTCAAAC 57.419 32.000 0.00 0.00 33.11 2.93
372 373 6.686630 ACACAAGTTTCACATCTTTCAAACA 58.313 32.000 0.00 0.00 32.20 2.83
373 374 6.586082 ACACAAGTTTCACATCTTTCAAACAC 59.414 34.615 0.00 0.00 32.20 3.32
374 375 6.585702 CACAAGTTTCACATCTTTCAAACACA 59.414 34.615 0.00 0.00 32.20 3.72
375 376 7.116090 CACAAGTTTCACATCTTTCAAACACAA 59.884 33.333 0.00 0.00 32.20 3.33
376 377 7.329226 ACAAGTTTCACATCTTTCAAACACAAG 59.671 33.333 0.00 0.00 32.20 3.16
377 378 6.924111 AGTTTCACATCTTTCAAACACAAGT 58.076 32.000 0.00 0.00 32.20 3.16
378 379 7.378181 AGTTTCACATCTTTCAAACACAAGTT 58.622 30.769 0.00 0.00 40.40 2.66
380 381 9.134734 GTTTCACATCTTTCAAACACAAGTTTA 57.865 29.630 0.00 0.00 45.80 2.01
381 382 9.698309 TTTCACATCTTTCAAACACAAGTTTAA 57.302 25.926 0.00 0.00 45.80 1.52
382 383 8.909708 TCACATCTTTCAAACACAAGTTTAAG 57.090 30.769 0.00 0.00 45.80 1.85
383 384 8.735315 TCACATCTTTCAAACACAAGTTTAAGA 58.265 29.630 8.09 8.09 45.80 2.10
384 385 9.520204 CACATCTTTCAAACACAAGTTTAAGAT 57.480 29.630 10.84 10.84 45.22 2.40
480 481 8.954950 TTTTGAATACATGGTCAACATTTTGT 57.045 26.923 7.90 0.00 37.84 2.83
481 482 8.586570 TTTGAATACATGGTCAACATTTTGTC 57.413 30.769 7.90 0.00 37.84 3.18
482 483 7.523293 TGAATACATGGTCAACATTTTGTCT 57.477 32.000 0.00 0.00 37.84 3.41
483 484 8.628630 TGAATACATGGTCAACATTTTGTCTA 57.371 30.769 0.00 0.00 37.84 2.59
484 485 9.241919 TGAATACATGGTCAACATTTTGTCTAT 57.758 29.630 0.00 0.00 37.84 1.98
489 490 9.679661 ACATGGTCAACATTTTGTCTATATACA 57.320 29.630 0.00 0.00 37.84 2.29
635 636 6.822073 ACGTTTTCTACCTTTTTCAAATGC 57.178 33.333 0.00 0.00 0.00 3.56
636 637 6.569780 ACGTTTTCTACCTTTTTCAAATGCT 58.430 32.000 0.00 0.00 0.00 3.79
637 638 7.039270 ACGTTTTCTACCTTTTTCAAATGCTT 58.961 30.769 0.00 0.00 0.00 3.91
638 639 7.222031 ACGTTTTCTACCTTTTTCAAATGCTTC 59.778 33.333 0.00 0.00 0.00 3.86
639 640 7.221838 CGTTTTCTACCTTTTTCAAATGCTTCA 59.778 33.333 0.00 0.00 0.00 3.02
640 641 9.045223 GTTTTCTACCTTTTTCAAATGCTTCAT 57.955 29.630 0.00 0.00 0.00 2.57
702 703 8.500837 TGCTTGATTAACACTTTTCAAATACG 57.499 30.769 0.00 0.00 0.00 3.06
703 704 8.132362 TGCTTGATTAACACTTTTCAAATACGT 58.868 29.630 0.00 0.00 0.00 3.57
704 705 8.417176 GCTTGATTAACACTTTTCAAATACGTG 58.583 33.333 0.00 0.00 0.00 4.49
705 706 9.445786 CTTGATTAACACTTTTCAAATACGTGT 57.554 29.630 0.00 0.00 40.22 4.49
706 707 9.790389 TTGATTAACACTTTTCAAATACGTGTT 57.210 25.926 14.00 14.00 46.70 3.32
707 708 9.790389 TGATTAACACTTTTCAAATACGTGTTT 57.210 25.926 14.49 4.25 43.83 2.83
709 710 9.790389 ATTAACACTTTTCAAATACGTGTTTGA 57.210 25.926 29.47 29.47 43.83 2.69
710 711 7.500807 AACACTTTTCAAATACGTGTTTGAC 57.499 32.000 31.95 0.00 45.04 3.18
711 712 6.848451 ACACTTTTCAAATACGTGTTTGACT 58.152 32.000 31.95 16.47 45.04 3.41
712 713 7.309920 ACACTTTTCAAATACGTGTTTGACTT 58.690 30.769 31.95 17.56 45.04 3.01
713 714 7.810759 ACACTTTTCAAATACGTGTTTGACTTT 59.189 29.630 31.95 17.84 45.04 2.66
714 715 8.643752 CACTTTTCAAATACGTGTTTGACTTTT 58.356 29.630 31.95 18.13 45.04 2.27
715 716 9.198837 ACTTTTCAAATACGTGTTTGACTTTTT 57.801 25.926 31.95 16.99 45.04 1.94
716 717 9.670180 CTTTTCAAATACGTGTTTGACTTTTTC 57.330 29.630 31.95 0.00 45.04 2.29
717 718 8.744008 TTTCAAATACGTGTTTGACTTTTTCA 57.256 26.923 31.95 17.62 45.04 2.69
718 719 8.744008 TTCAAATACGTGTTTGACTTTTTCAA 57.256 26.923 31.95 17.01 45.04 2.69
719 720 8.164058 TCAAATACGTGTTTGACTTTTTCAAC 57.836 30.769 29.47 0.00 44.28 3.18
720 721 7.808381 TCAAATACGTGTTTGACTTTTTCAACA 59.192 29.630 29.47 9.21 44.28 3.33
721 722 7.500807 AATACGTGTTTGACTTTTTCAACAC 57.499 32.000 0.00 4.31 44.28 3.32
722 723 4.861210 ACGTGTTTGACTTTTTCAACACA 58.139 34.783 12.96 5.33 44.28 3.72
723 724 5.465935 ACGTGTTTGACTTTTTCAACACAT 58.534 33.333 12.96 0.00 44.28 3.21
724 725 5.923684 ACGTGTTTGACTTTTTCAACACATT 59.076 32.000 12.96 0.00 44.28 2.71
725 726 6.128956 ACGTGTTTGACTTTTTCAACACATTG 60.129 34.615 12.96 1.76 44.28 2.82
726 727 6.128956 CGTGTTTGACTTTTTCAACACATTGT 60.129 34.615 12.96 0.00 44.28 2.71
727 728 7.061210 CGTGTTTGACTTTTTCAACACATTGTA 59.939 33.333 12.96 0.00 44.28 2.41
728 729 8.868916 GTGTTTGACTTTTTCAACACATTGTAT 58.131 29.630 8.74 0.00 44.28 2.29
758 759 9.967346 TTTTGTATAAATTTTTCGTGGACATGA 57.033 25.926 0.00 0.00 0.00 3.07
759 760 9.619316 TTTGTATAAATTTTTCGTGGACATGAG 57.381 29.630 0.00 0.00 0.00 2.90
760 761 8.554835 TGTATAAATTTTTCGTGGACATGAGA 57.445 30.769 0.00 0.00 0.00 3.27
761 762 9.004717 TGTATAAATTTTTCGTGGACATGAGAA 57.995 29.630 0.00 0.00 0.00 2.87
762 763 9.834628 GTATAAATTTTTCGTGGACATGAGAAA 57.165 29.630 11.18 11.18 35.70 2.52
763 764 8.742554 ATAAATTTTTCGTGGACATGAGAAAC 57.257 30.769 11.06 0.00 34.59 2.78
764 765 5.766150 ATTTTTCGTGGACATGAGAAACA 57.234 34.783 11.06 0.00 34.59 2.83
765 766 5.766150 TTTTTCGTGGACATGAGAAACAT 57.234 34.783 0.00 0.00 40.17 2.71
809 810 9.883142 AACATTTTTCAAATACTTGGTTCTCAA 57.117 25.926 0.00 0.00 33.01 3.02
886 887 9.921637 ATTTTGAACTACAAACAGAAGTGAAAA 57.078 25.926 0.00 0.00 46.32 2.29
887 888 9.751542 TTTTGAACTACAAACAGAAGTGAAAAA 57.248 25.926 0.00 0.00 46.32 1.94
962 979 4.681978 AACTCGTGCGTCCCTGGC 62.682 66.667 0.00 0.00 0.00 4.85
972 989 2.368192 TCCCTGGCCACCCCTATG 60.368 66.667 0.00 0.00 0.00 2.23
973 990 2.696125 CCCTGGCCACCCCTATGT 60.696 66.667 0.00 0.00 0.00 2.29
974 991 2.757124 CCCTGGCCACCCCTATGTC 61.757 68.421 0.00 0.00 0.00 3.06
975 992 2.757124 CCTGGCCACCCCTATGTCC 61.757 68.421 0.00 0.00 0.00 4.02
1024 1041 2.501610 GCTCCGAGTTAGGCCCTG 59.498 66.667 0.00 0.00 0.00 4.45
1227 1247 1.076265 GGGCCCTTATTGGTGACCC 60.076 63.158 17.04 0.00 30.57 4.46
1289 1313 8.843885 TTCATTCAGATATGATTCCTGATGTC 57.156 34.615 0.00 0.00 36.88 3.06
1389 1425 2.603412 CGCTCGTATGACTCCTCATGTC 60.603 54.545 0.00 0.00 37.70 3.06
1470 1508 7.208777 TGCTTTGCTATTTGTTTGATTCTTCA 58.791 30.769 0.00 0.00 0.00 3.02
1482 1522 4.997905 TGATTCTTCATAATAGCAGCGC 57.002 40.909 0.00 0.00 0.00 5.92
1494 1583 3.984292 GCAGCGCAATATATCTGCC 57.016 52.632 11.47 6.58 44.35 4.85
1513 1602 1.134551 CCAGAGTTCTTAGGAGCAGCC 60.135 57.143 0.00 0.00 0.00 4.85
1548 1667 5.694006 AGAGTTCTTAATAGCAGCGCTAATG 59.306 40.000 10.99 0.00 44.62 1.90
1571 1696 2.081955 AGCCCTGCTGTTCCTTCAT 58.918 52.632 0.00 0.00 37.57 2.57
1577 1702 4.440663 GCCCTGCTGTTCCTTCATATTTTC 60.441 45.833 0.00 0.00 0.00 2.29
1661 1786 1.257743 ATGGATCGGAGGGATGTACG 58.742 55.000 0.00 0.00 34.82 3.67
1676 1801 2.182014 TGTACGAAATCAGCGACGATG 58.818 47.619 6.80 6.80 0.00 3.84
1789 2175 6.484364 TTCTACCTGCATGATGAACTGATA 57.516 37.500 0.00 0.00 0.00 2.15
2179 2565 4.571984 TCATTCAGATATGTTGGCGACTTG 59.428 41.667 6.41 0.00 0.00 3.16
2180 2566 3.885724 TCAGATATGTTGGCGACTTGA 57.114 42.857 6.41 0.32 0.00 3.02
2181 2567 3.785486 TCAGATATGTTGGCGACTTGAG 58.215 45.455 6.41 0.00 0.00 3.02
2182 2568 2.868583 CAGATATGTTGGCGACTTGAGG 59.131 50.000 6.41 0.00 0.00 3.86
2183 2569 2.158900 AGATATGTTGGCGACTTGAGGG 60.159 50.000 6.41 0.00 0.00 4.30
2184 2570 0.392461 TATGTTGGCGACTTGAGGGC 60.392 55.000 6.41 0.00 0.00 5.19
2185 2571 2.281484 GTTGGCGACTTGAGGGCA 60.281 61.111 0.00 0.00 36.89 5.36
2186 2572 2.032528 TTGGCGACTTGAGGGCAG 59.967 61.111 0.00 0.00 40.00 4.85
2187 2573 3.551496 TTGGCGACTTGAGGGCAGG 62.551 63.158 0.00 0.00 40.00 4.85
2190 2576 3.710722 CGACTTGAGGGCAGGCCT 61.711 66.667 17.36 17.36 36.10 5.19
2191 2577 2.045536 GACTTGAGGGCAGGCCTG 60.046 66.667 29.34 29.34 36.10 4.85
2192 2578 3.635268 GACTTGAGGGCAGGCCTGG 62.635 68.421 33.46 17.36 36.10 4.45
2205 2591 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
2206 2592 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
2207 2593 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
2208 2594 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
2209 2595 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
2210 2596 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
2211 2597 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
2212 2598 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2213 2599 1.484444 GCAGTGGTGAAGTCCTCCCT 61.484 60.000 0.00 0.00 0.00 4.20
2214 2600 1.938585 CAGTGGTGAAGTCCTCCCTA 58.061 55.000 0.00 0.00 0.00 3.53
2215 2601 1.550976 CAGTGGTGAAGTCCTCCCTAC 59.449 57.143 0.00 0.00 0.00 3.18
2216 2602 1.433592 AGTGGTGAAGTCCTCCCTACT 59.566 52.381 0.00 0.00 0.00 2.57
2217 2603 2.158143 AGTGGTGAAGTCCTCCCTACTT 60.158 50.000 0.00 0.00 39.84 2.24
2218 2604 2.028020 GTGGTGAAGTCCTCCCTACTTG 60.028 54.545 0.00 0.00 37.31 3.16
2219 2605 2.258109 GGTGAAGTCCTCCCTACTTGT 58.742 52.381 0.00 0.00 37.31 3.16
2220 2606 2.028020 GGTGAAGTCCTCCCTACTTGTG 60.028 54.545 0.00 0.00 37.31 3.33
2221 2607 1.623811 TGAAGTCCTCCCTACTTGTGC 59.376 52.381 0.00 0.00 37.31 4.57
2222 2608 0.984995 AAGTCCTCCCTACTTGTGCC 59.015 55.000 0.00 0.00 35.87 5.01
2223 2609 0.178903 AGTCCTCCCTACTTGTGCCA 60.179 55.000 0.00 0.00 0.00 4.92
2224 2610 0.690762 GTCCTCCCTACTTGTGCCAA 59.309 55.000 0.00 0.00 0.00 4.52
2225 2611 0.984230 TCCTCCCTACTTGTGCCAAG 59.016 55.000 11.87 11.87 0.00 3.61
2226 2612 0.984230 CCTCCCTACTTGTGCCAAGA 59.016 55.000 18.22 5.05 0.00 3.02
2227 2613 1.065854 CCTCCCTACTTGTGCCAAGAG 60.066 57.143 18.22 11.89 0.00 2.85
2228 2614 0.984230 TCCCTACTTGTGCCAAGAGG 59.016 55.000 18.22 17.50 38.23 3.69
2229 2615 0.693049 CCCTACTTGTGCCAAGAGGT 59.307 55.000 18.22 3.65 37.19 3.85
2230 2616 1.339151 CCCTACTTGTGCCAAGAGGTC 60.339 57.143 18.22 0.00 37.19 3.85
2231 2617 1.339151 CCTACTTGTGCCAAGAGGTCC 60.339 57.143 18.22 0.00 37.19 4.46
2232 2618 1.625818 CTACTTGTGCCAAGAGGTCCT 59.374 52.381 18.22 0.00 37.19 3.85
2233 2619 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2234 2620 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
2235 2621 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
2236 2622 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
2237 2623 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
2238 2624 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
2239 2625 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
2240 2626 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
2241 2627 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
2242 2628 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
2253 2639 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
2254 2640 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2255 2641 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2256 2642 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2257 2643 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2258 2644 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2259 2645 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2260 2646 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2261 2647 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2262 2648 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2263 2649 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2264 2650 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2265 2651 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2266 2652 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2276 2662 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2277 2663 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2278 2664 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2279 2665 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2280 2666 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2281 2667 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2282 2668 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2283 2669 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2284 2670 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2285 2671 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2286 2672 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2287 2673 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2288 2674 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2289 2675 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2290 2676 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2291 2677 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2292 2678 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2293 2679 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2294 2680 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2295 2681 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2296 2682 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2297 2683 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2298 2684 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2299 2685 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2300 2686 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2301 2687 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2302 2688 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2303 2689 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2304 2690 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2305 2691 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2306 2692 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2307 2693 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2308 2694 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2310 2696 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2311 2697 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2312 2698 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2313 2699 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2314 2700 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2315 2701 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2316 2702 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2323 2709 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2324 2710 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2325 2711 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2326 2712 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2327 2713 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2328 2714 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2329 2715 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2330 2716 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2331 2717 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2332 2718 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2333 2719 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2334 2720 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2335 2721 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2336 2722 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2337 2723 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2338 2724 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2339 2725 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2340 2726 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2341 2727 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2342 2728 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2343 2729 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2344 2730 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2345 2731 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
2346 2732 1.429930 TGCACTGGGTCTGTCCTTTA 58.570 50.000 0.00 0.00 36.25 1.85
2347 2733 1.347707 TGCACTGGGTCTGTCCTTTAG 59.652 52.381 0.00 0.00 36.25 1.85
2348 2734 1.623811 GCACTGGGTCTGTCCTTTAGA 59.376 52.381 0.00 0.00 36.25 2.10
2349 2735 2.237392 GCACTGGGTCTGTCCTTTAGAT 59.763 50.000 0.00 0.00 36.25 1.98
2350 2736 3.451178 GCACTGGGTCTGTCCTTTAGATA 59.549 47.826 0.00 0.00 36.25 1.98
2351 2737 4.101741 GCACTGGGTCTGTCCTTTAGATAT 59.898 45.833 0.00 0.00 36.25 1.63
2352 2738 5.605534 CACTGGGTCTGTCCTTTAGATATG 58.394 45.833 0.00 0.00 36.25 1.78
2353 2739 5.129485 CACTGGGTCTGTCCTTTAGATATGT 59.871 44.000 0.00 0.00 36.25 2.29
2354 2740 5.726793 ACTGGGTCTGTCCTTTAGATATGTT 59.273 40.000 0.00 0.00 36.25 2.71
2355 2741 5.989477 TGGGTCTGTCCTTTAGATATGTTG 58.011 41.667 0.00 0.00 36.25 3.33
2356 2742 5.104527 TGGGTCTGTCCTTTAGATATGTTGG 60.105 44.000 0.00 0.00 36.25 3.77
2357 2743 4.816925 GGTCTGTCCTTTAGATATGTTGGC 59.183 45.833 0.00 0.00 0.00 4.52
2358 2744 4.508124 GTCTGTCCTTTAGATATGTTGGCG 59.492 45.833 0.00 0.00 0.00 5.69
2359 2745 4.404394 TCTGTCCTTTAGATATGTTGGCGA 59.596 41.667 0.00 0.00 0.00 5.54
2360 2746 4.439057 TGTCCTTTAGATATGTTGGCGAC 58.561 43.478 0.00 0.00 0.00 5.19
2361 2747 4.161565 TGTCCTTTAGATATGTTGGCGACT 59.838 41.667 6.41 0.00 0.00 4.18
2362 2748 5.116882 GTCCTTTAGATATGTTGGCGACTT 58.883 41.667 6.41 2.26 0.00 3.01
2366 2752 6.462487 CCTTTAGATATGTTGGCGACTTCCTA 60.462 42.308 6.41 3.21 0.00 2.94
2368 2754 4.215908 AGATATGTTGGCGACTTCCTAGA 58.784 43.478 6.41 0.00 0.00 2.43
2371 2757 1.207089 TGTTGGCGACTTCCTAGATGG 59.793 52.381 6.41 0.00 37.10 3.51
2411 2797 1.594331 GGTTCATTGCTATCCGGGAC 58.406 55.000 0.00 0.00 0.00 4.46
2429 2815 0.670546 ACGAGTTGGATTGTCTGCGG 60.671 55.000 0.00 0.00 0.00 5.69
2816 3218 7.650890 TGTTATGTGCATATTAAGAGCATTGG 58.349 34.615 0.00 0.00 40.78 3.16
2818 3220 8.517878 GTTATGTGCATATTAAGAGCATTGGAT 58.482 33.333 0.00 0.00 40.78 3.41
2836 3238 7.864379 GCATTGGATGGTAATGAAACTAAGATG 59.136 37.037 0.00 0.00 37.65 2.90
3147 3553 8.100508 TGTCATTCAAAACATTACCGTTGATA 57.899 30.769 0.00 0.00 30.51 2.15
3167 3573 9.334693 GTTGATAGAGCATTTCTTTTGTACTTG 57.665 33.333 0.00 0.00 37.36 3.16
3514 3921 4.586001 AGTGGACTTTCAGATGCAATTGTT 59.414 37.500 7.40 0.00 0.00 2.83
3619 4029 7.197486 GCTAAAGCTTAAATTTGACATCACG 57.803 36.000 0.00 0.00 38.21 4.35
3631 4041 4.547406 TGACATCACGTCTAAGGATACG 57.453 45.455 0.00 0.00 45.60 3.06
3682 4107 3.799755 GCGCAGTACCAAAGGCCG 61.800 66.667 0.30 0.00 0.00 6.13
3694 4119 1.133025 CAAAGGCCGGATGTTGTGATC 59.867 52.381 5.05 0.00 0.00 2.92
3746 4171 4.320494 CCCGTTTCCTCACTTTCATTTCAG 60.320 45.833 0.00 0.00 0.00 3.02
3775 4200 6.767524 TGTTCATTTGACAGTGGTAAAGTT 57.232 33.333 0.00 0.00 0.00 2.66
3837 4262 0.694783 TCCACCATGGGGCCGTATTA 60.695 55.000 18.09 0.00 38.32 0.98
3932 4358 8.126700 GTCTTGATTTTCCTTCTTTCGTGTTAA 58.873 33.333 0.00 0.00 0.00 2.01
3933 4359 8.846211 TCTTGATTTTCCTTCTTTCGTGTTAAT 58.154 29.630 0.00 0.00 0.00 1.40
3934 4360 9.463443 CTTGATTTTCCTTCTTTCGTGTTAATT 57.537 29.630 0.00 0.00 0.00 1.40
3990 4419 6.500910 CGAATCAATGAATGGATGATGTGTT 58.499 36.000 0.00 0.00 34.21 3.32
4005 4434 0.736053 GTGTTGAGTGGAAACGGCAA 59.264 50.000 0.00 0.00 0.00 4.52
4026 4455 6.127366 GGCAAATATCCTTGTTCCAGATCAAA 60.127 38.462 0.00 0.00 0.00 2.69
4036 4465 6.441093 TGTTCCAGATCAAATTGTAGCATC 57.559 37.500 0.00 0.00 0.00 3.91
4095 4524 7.065803 CGGATCACACTTTAATTGAATGTACCT 59.934 37.037 0.00 0.00 0.00 3.08
4127 4567 2.957006 GGAGTACTCTGATCCGGCTTTA 59.043 50.000 21.88 0.00 0.00 1.85
4128 4568 3.243468 GGAGTACTCTGATCCGGCTTTAC 60.243 52.174 21.88 0.00 0.00 2.01
4129 4569 2.694109 AGTACTCTGATCCGGCTTTACC 59.306 50.000 0.00 0.00 0.00 2.85
4130 4570 1.867363 ACTCTGATCCGGCTTTACCT 58.133 50.000 0.00 0.00 35.61 3.08
4131 4571 2.188817 ACTCTGATCCGGCTTTACCTT 58.811 47.619 0.00 0.00 35.61 3.50
4132 4572 2.572104 ACTCTGATCCGGCTTTACCTTT 59.428 45.455 0.00 0.00 35.61 3.11
4137 4577 1.600023 TCCGGCTTTACCTTTGTGTG 58.400 50.000 0.00 0.00 35.61 3.82
4152 4592 5.410132 CCTTTGTGTGTATATGTTGTTCCGA 59.590 40.000 0.00 0.00 0.00 4.55
4162 4602 1.001974 TGTTGTTCCGATGACTCCTGG 59.998 52.381 0.00 0.00 0.00 4.45
4201 4641 5.352569 CGTAGAATTGTCTCCTTGCTTTGAT 59.647 40.000 0.00 0.00 35.12 2.57
4223 4665 3.454375 TGGTTCTCTCTTGTTGACGTTC 58.546 45.455 0.00 0.00 0.00 3.95
4318 4763 3.315191 GCTTTTAGGCGATGGAATTAGCA 59.685 43.478 0.00 0.00 32.95 3.49
4448 4893 1.063006 CATGTCGCCCTTTCGCATG 59.937 57.895 0.00 0.00 37.50 4.06
4539 4984 5.173664 CCATTGCTCTTCTCAATTTTTCCC 58.826 41.667 0.00 0.00 32.30 3.97
4582 5030 3.005791 AGACGCTTTGCTTGGCTTTAATT 59.994 39.130 0.00 0.00 0.00 1.40
4653 5101 5.631119 AGTGCTACTACAAACCCTCAAAAT 58.369 37.500 0.00 0.00 0.00 1.82
4657 5105 3.571590 ACTACAAACCCTCAAAATGGCA 58.428 40.909 0.00 0.00 0.00 4.92
4764 5213 1.838073 GACATGACCACGGTCCCCTT 61.838 60.000 13.60 0.00 43.97 3.95
4799 5257 3.918220 GCATGCGAAGACGGCGAG 61.918 66.667 16.62 0.00 40.15 5.03
4882 5340 8.478066 AGAAAGATAATCATTTTGTAAAGGCCC 58.522 33.333 0.00 0.00 0.00 5.80
4886 5344 5.665916 AATCATTTTGTAAAGGCCCTCAG 57.334 39.130 0.00 0.00 0.00 3.35
4898 5356 1.880819 GCCCTCAGCATGGTGTTTGG 61.881 60.000 23.35 20.79 42.97 3.28
4937 5395 2.000447 GAGCTTTGTTACGGATTCGCT 59.000 47.619 0.00 0.00 40.63 4.93
4940 5398 3.555956 AGCTTTGTTACGGATTCGCTATG 59.444 43.478 0.00 0.00 40.63 2.23
4955 5413 2.738846 CGCTATGCAACCCAAGCTATAG 59.261 50.000 0.00 0.00 32.73 1.31
4958 5416 0.463654 TGCAACCCAAGCTATAGCCG 60.464 55.000 21.17 12.49 43.38 5.52
4970 5428 0.812412 TATAGCCGCGAAACCAAGCC 60.812 55.000 8.23 0.00 0.00 4.35
4979 5437 1.333435 CGAAACCAAGCCACGTAACAC 60.333 52.381 0.00 0.00 0.00 3.32
4982 5440 3.412237 AACCAAGCCACGTAACACTAT 57.588 42.857 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.019075 GGAAACCGATGAAAACCAAGAAAAAG 60.019 38.462 0.00 0.00 0.00 2.27
1 2 5.813157 GGAAACCGATGAAAACCAAGAAAAA 59.187 36.000 0.00 0.00 0.00 1.94
6 7 4.037446 TGAAGGAAACCGATGAAAACCAAG 59.963 41.667 0.00 0.00 0.00 3.61
8 9 3.556999 TGAAGGAAACCGATGAAAACCA 58.443 40.909 0.00 0.00 0.00 3.67
9 10 4.783764 ATGAAGGAAACCGATGAAAACC 57.216 40.909 0.00 0.00 0.00 3.27
10 11 6.447162 AGAAATGAAGGAAACCGATGAAAAC 58.553 36.000 0.00 0.00 0.00 2.43
11 12 6.648879 AGAAATGAAGGAAACCGATGAAAA 57.351 33.333 0.00 0.00 0.00 2.29
12 13 6.648879 AAGAAATGAAGGAAACCGATGAAA 57.351 33.333 0.00 0.00 0.00 2.69
13 14 6.490040 AGAAAGAAATGAAGGAAACCGATGAA 59.510 34.615 0.00 0.00 0.00 2.57
14 15 6.003950 AGAAAGAAATGAAGGAAACCGATGA 58.996 36.000 0.00 0.00 0.00 2.92
15 16 6.259550 AGAAAGAAATGAAGGAAACCGATG 57.740 37.500 0.00 0.00 0.00 3.84
16 17 5.122396 CGAGAAAGAAATGAAGGAAACCGAT 59.878 40.000 0.00 0.00 0.00 4.18
17 18 4.451096 CGAGAAAGAAATGAAGGAAACCGA 59.549 41.667 0.00 0.00 0.00 4.69
18 19 4.378459 CCGAGAAAGAAATGAAGGAAACCG 60.378 45.833 0.00 0.00 0.00 4.44
19 20 4.082733 CCCGAGAAAGAAATGAAGGAAACC 60.083 45.833 0.00 0.00 0.00 3.27
20 21 4.519350 ACCCGAGAAAGAAATGAAGGAAAC 59.481 41.667 0.00 0.00 0.00 2.78
21 22 4.725490 ACCCGAGAAAGAAATGAAGGAAA 58.275 39.130 0.00 0.00 0.00 3.13
22 23 4.367039 ACCCGAGAAAGAAATGAAGGAA 57.633 40.909 0.00 0.00 0.00 3.36
23 24 4.367039 AACCCGAGAAAGAAATGAAGGA 57.633 40.909 0.00 0.00 0.00 3.36
24 25 4.762251 AGAAACCCGAGAAAGAAATGAAGG 59.238 41.667 0.00 0.00 0.00 3.46
25 26 5.389935 CGAGAAACCCGAGAAAGAAATGAAG 60.390 44.000 0.00 0.00 0.00 3.02
26 27 4.451096 CGAGAAACCCGAGAAAGAAATGAA 59.549 41.667 0.00 0.00 0.00 2.57
27 28 3.994392 CGAGAAACCCGAGAAAGAAATGA 59.006 43.478 0.00 0.00 0.00 2.57
28 29 3.125316 CCGAGAAACCCGAGAAAGAAATG 59.875 47.826 0.00 0.00 0.00 2.32
29 30 3.244457 ACCGAGAAACCCGAGAAAGAAAT 60.244 43.478 0.00 0.00 0.00 2.17
30 31 2.103601 ACCGAGAAACCCGAGAAAGAAA 59.896 45.455 0.00 0.00 0.00 2.52
31 32 1.690352 ACCGAGAAACCCGAGAAAGAA 59.310 47.619 0.00 0.00 0.00 2.52
32 33 1.335145 ACCGAGAAACCCGAGAAAGA 58.665 50.000 0.00 0.00 0.00 2.52
33 34 2.165319 AACCGAGAAACCCGAGAAAG 57.835 50.000 0.00 0.00 0.00 2.62
34 35 2.158928 TGAAACCGAGAAACCCGAGAAA 60.159 45.455 0.00 0.00 0.00 2.52
35 36 1.413445 TGAAACCGAGAAACCCGAGAA 59.587 47.619 0.00 0.00 0.00 2.87
36 37 1.042229 TGAAACCGAGAAACCCGAGA 58.958 50.000 0.00 0.00 0.00 4.04
37 38 2.094762 ATGAAACCGAGAAACCCGAG 57.905 50.000 0.00 0.00 0.00 4.63
38 39 2.554370 AATGAAACCGAGAAACCCGA 57.446 45.000 0.00 0.00 0.00 5.14
39 40 3.332034 AGTAATGAAACCGAGAAACCCG 58.668 45.455 0.00 0.00 0.00 5.28
40 41 5.458015 CAAAGTAATGAAACCGAGAAACCC 58.542 41.667 0.00 0.00 0.00 4.11
41 42 4.915667 GCAAAGTAATGAAACCGAGAAACC 59.084 41.667 0.00 0.00 0.00 3.27
42 43 5.516090 TGCAAAGTAATGAAACCGAGAAAC 58.484 37.500 0.00 0.00 0.00 2.78
43 44 5.759506 TGCAAAGTAATGAAACCGAGAAA 57.240 34.783 0.00 0.00 0.00 2.52
44 45 5.390461 CGATGCAAAGTAATGAAACCGAGAA 60.390 40.000 0.00 0.00 0.00 2.87
45 46 4.092821 CGATGCAAAGTAATGAAACCGAGA 59.907 41.667 0.00 0.00 0.00 4.04
46 47 4.334443 CGATGCAAAGTAATGAAACCGAG 58.666 43.478 0.00 0.00 0.00 4.63
47 48 3.126171 CCGATGCAAAGTAATGAAACCGA 59.874 43.478 0.00 0.00 0.00 4.69
48 49 3.119990 ACCGATGCAAAGTAATGAAACCG 60.120 43.478 0.00 0.00 0.00 4.44
49 50 4.434713 ACCGATGCAAAGTAATGAAACC 57.565 40.909 0.00 0.00 0.00 3.27
50 51 6.149633 AGAAACCGATGCAAAGTAATGAAAC 58.850 36.000 0.00 0.00 0.00 2.78
51 52 6.325919 AGAAACCGATGCAAAGTAATGAAA 57.674 33.333 0.00 0.00 0.00 2.69
52 53 5.957842 AGAAACCGATGCAAAGTAATGAA 57.042 34.783 0.00 0.00 0.00 2.57
53 54 5.957842 AAGAAACCGATGCAAAGTAATGA 57.042 34.783 0.00 0.00 0.00 2.57
54 55 6.420604 ACAAAAGAAACCGATGCAAAGTAATG 59.579 34.615 0.00 0.00 0.00 1.90
55 56 6.512297 ACAAAAGAAACCGATGCAAAGTAAT 58.488 32.000 0.00 0.00 0.00 1.89
56 57 5.897050 ACAAAAGAAACCGATGCAAAGTAA 58.103 33.333 0.00 0.00 0.00 2.24
57 58 5.508200 ACAAAAGAAACCGATGCAAAGTA 57.492 34.783 0.00 0.00 0.00 2.24
58 59 4.385358 ACAAAAGAAACCGATGCAAAGT 57.615 36.364 0.00 0.00 0.00 2.66
59 60 5.717038 AAACAAAAGAAACCGATGCAAAG 57.283 34.783 0.00 0.00 0.00 2.77
60 61 6.073003 ACAAAAACAAAAGAAACCGATGCAAA 60.073 30.769 0.00 0.00 0.00 3.68
61 62 5.409826 ACAAAAACAAAAGAAACCGATGCAA 59.590 32.000 0.00 0.00 0.00 4.08
62 63 4.932200 ACAAAAACAAAAGAAACCGATGCA 59.068 33.333 0.00 0.00 0.00 3.96
63 64 5.463499 ACAAAAACAAAAGAAACCGATGC 57.537 34.783 0.00 0.00 0.00 3.91
64 65 8.227119 AGAAAACAAAAACAAAAGAAACCGATG 58.773 29.630 0.00 0.00 0.00 3.84
65 66 8.317891 AGAAAACAAAAACAAAAGAAACCGAT 57.682 26.923 0.00 0.00 0.00 4.18
66 67 7.716768 AGAAAACAAAAACAAAAGAAACCGA 57.283 28.000 0.00 0.00 0.00 4.69
67 68 8.677635 CAAAGAAAACAAAAACAAAAGAAACCG 58.322 29.630 0.00 0.00 0.00 4.44
68 69 9.509855 ACAAAGAAAACAAAAACAAAAGAAACC 57.490 25.926 0.00 0.00 0.00 3.27
87 88 9.723447 GTGAAAACCAAAAAGAAAAACAAAGAA 57.277 25.926 0.00 0.00 0.00 2.52
88 89 9.114952 AGTGAAAACCAAAAAGAAAAACAAAGA 57.885 25.926 0.00 0.00 0.00 2.52
89 90 9.168353 CAGTGAAAACCAAAAAGAAAAACAAAG 57.832 29.630 0.00 0.00 0.00 2.77
90 91 8.131731 CCAGTGAAAACCAAAAAGAAAAACAAA 58.868 29.630 0.00 0.00 0.00 2.83
91 92 7.255277 CCCAGTGAAAACCAAAAAGAAAAACAA 60.255 33.333 0.00 0.00 0.00 2.83
92 93 6.205658 CCCAGTGAAAACCAAAAAGAAAAACA 59.794 34.615 0.00 0.00 0.00 2.83
93 94 6.607689 CCCAGTGAAAACCAAAAAGAAAAAC 58.392 36.000 0.00 0.00 0.00 2.43
94 95 5.182190 GCCCAGTGAAAACCAAAAAGAAAAA 59.818 36.000 0.00 0.00 0.00 1.94
95 96 4.697828 GCCCAGTGAAAACCAAAAAGAAAA 59.302 37.500 0.00 0.00 0.00 2.29
96 97 4.019771 AGCCCAGTGAAAACCAAAAAGAAA 60.020 37.500 0.00 0.00 0.00 2.52
97 98 3.517500 AGCCCAGTGAAAACCAAAAAGAA 59.482 39.130 0.00 0.00 0.00 2.52
98 99 3.103742 AGCCCAGTGAAAACCAAAAAGA 58.896 40.909 0.00 0.00 0.00 2.52
99 100 3.541996 AGCCCAGTGAAAACCAAAAAG 57.458 42.857 0.00 0.00 0.00 2.27
100 101 3.517500 AGAAGCCCAGTGAAAACCAAAAA 59.482 39.130 0.00 0.00 0.00 1.94
101 102 3.103742 AGAAGCCCAGTGAAAACCAAAA 58.896 40.909 0.00 0.00 0.00 2.44
102 103 2.745968 AGAAGCCCAGTGAAAACCAAA 58.254 42.857 0.00 0.00 0.00 3.28
103 104 2.452600 AGAAGCCCAGTGAAAACCAA 57.547 45.000 0.00 0.00 0.00 3.67
104 105 2.430332 CAAAGAAGCCCAGTGAAAACCA 59.570 45.455 0.00 0.00 0.00 3.67
105 106 2.224042 CCAAAGAAGCCCAGTGAAAACC 60.224 50.000 0.00 0.00 0.00 3.27
106 107 2.430694 ACCAAAGAAGCCCAGTGAAAAC 59.569 45.455 0.00 0.00 0.00 2.43
107 108 2.745968 ACCAAAGAAGCCCAGTGAAAA 58.254 42.857 0.00 0.00 0.00 2.29
108 109 2.452600 ACCAAAGAAGCCCAGTGAAA 57.547 45.000 0.00 0.00 0.00 2.69
109 110 3.806949 ATACCAAAGAAGCCCAGTGAA 57.193 42.857 0.00 0.00 0.00 3.18
110 111 3.561313 GGAATACCAAAGAAGCCCAGTGA 60.561 47.826 0.00 0.00 35.97 3.41
111 112 2.755103 GGAATACCAAAGAAGCCCAGTG 59.245 50.000 0.00 0.00 35.97 3.66
112 113 2.649816 AGGAATACCAAAGAAGCCCAGT 59.350 45.455 0.00 0.00 38.94 4.00
113 114 3.372440 AGGAATACCAAAGAAGCCCAG 57.628 47.619 0.00 0.00 38.94 4.45
114 115 3.181423 ACAAGGAATACCAAAGAAGCCCA 60.181 43.478 0.00 0.00 38.94 5.36
115 116 3.431415 ACAAGGAATACCAAAGAAGCCC 58.569 45.455 0.00 0.00 38.94 5.19
116 117 5.468540 AAACAAGGAATACCAAAGAAGCC 57.531 39.130 0.00 0.00 38.94 4.35
291 292 9.627395 CGTAAAATATGTATGAAACAAAACCCA 57.373 29.630 0.00 0.00 42.70 4.51
292 293 9.628746 ACGTAAAATATGTATGAAACAAAACCC 57.371 29.630 0.00 0.00 42.70 4.11
334 335 9.744468 GTGAAACTTGTGTTAGGAAAATGTATT 57.256 29.630 0.00 0.00 34.96 1.89
335 336 8.908903 TGTGAAACTTGTGTTAGGAAAATGTAT 58.091 29.630 0.00 0.00 38.04 2.29
336 337 8.282455 TGTGAAACTTGTGTTAGGAAAATGTA 57.718 30.769 0.00 0.00 38.04 2.29
337 338 7.164230 TGTGAAACTTGTGTTAGGAAAATGT 57.836 32.000 0.00 0.00 38.04 2.71
338 339 8.137437 AGATGTGAAACTTGTGTTAGGAAAATG 58.863 33.333 0.00 0.00 38.04 2.32
339 340 8.237811 AGATGTGAAACTTGTGTTAGGAAAAT 57.762 30.769 0.00 0.00 38.04 1.82
340 341 7.639113 AGATGTGAAACTTGTGTTAGGAAAA 57.361 32.000 0.00 0.00 38.04 2.29
341 342 7.639113 AAGATGTGAAACTTGTGTTAGGAAA 57.361 32.000 0.00 0.00 38.04 3.13
342 343 7.338196 TGAAAGATGTGAAACTTGTGTTAGGAA 59.662 33.333 0.00 0.00 38.04 3.36
343 344 6.826231 TGAAAGATGTGAAACTTGTGTTAGGA 59.174 34.615 0.00 0.00 38.04 2.94
344 345 7.026631 TGAAAGATGTGAAACTTGTGTTAGG 57.973 36.000 0.00 0.00 38.04 2.69
345 346 8.798153 GTTTGAAAGATGTGAAACTTGTGTTAG 58.202 33.333 0.00 0.00 38.04 2.34
346 347 8.300286 TGTTTGAAAGATGTGAAACTTGTGTTA 58.700 29.630 0.00 0.00 38.04 2.41
347 348 7.116233 GTGTTTGAAAGATGTGAAACTTGTGTT 59.884 33.333 0.00 0.00 38.04 3.32
348 349 6.586082 GTGTTTGAAAGATGTGAAACTTGTGT 59.414 34.615 0.00 0.00 38.04 3.72
349 350 6.585702 TGTGTTTGAAAGATGTGAAACTTGTG 59.414 34.615 0.00 0.00 38.04 3.33
350 351 6.686630 TGTGTTTGAAAGATGTGAAACTTGT 58.313 32.000 0.00 0.00 38.04 3.16
351 352 7.329226 ACTTGTGTTTGAAAGATGTGAAACTTG 59.671 33.333 0.00 0.00 38.04 3.16
352 353 7.378181 ACTTGTGTTTGAAAGATGTGAAACTT 58.622 30.769 0.00 0.00 38.04 2.66
353 354 6.924111 ACTTGTGTTTGAAAGATGTGAAACT 58.076 32.000 0.00 0.00 38.04 2.66
354 355 7.581011 AACTTGTGTTTGAAAGATGTGAAAC 57.419 32.000 0.00 0.00 31.37 2.78
355 356 9.698309 TTAAACTTGTGTTTGAAAGATGTGAAA 57.302 25.926 4.64 0.00 45.01 2.69
356 357 9.352784 CTTAAACTTGTGTTTGAAAGATGTGAA 57.647 29.630 4.64 0.00 45.01 3.18
357 358 8.735315 TCTTAAACTTGTGTTTGAAAGATGTGA 58.265 29.630 4.64 0.00 45.01 3.58
358 359 8.909708 TCTTAAACTTGTGTTTGAAAGATGTG 57.090 30.769 4.64 0.00 45.01 3.21
454 455 9.388506 ACAAAATGTTGACCATGTATTCAAAAA 57.611 25.926 1.62 0.00 38.20 1.94
455 456 8.954950 ACAAAATGTTGACCATGTATTCAAAA 57.045 26.923 1.62 0.19 38.20 2.44
456 457 8.420222 AGACAAAATGTTGACCATGTATTCAAA 58.580 29.630 1.62 0.00 38.20 2.69
457 458 7.950512 AGACAAAATGTTGACCATGTATTCAA 58.049 30.769 1.62 0.00 38.20 2.69
458 459 7.523293 AGACAAAATGTTGACCATGTATTCA 57.477 32.000 1.62 0.00 38.20 2.57
463 464 9.679661 TGTATATAGACAAAATGTTGACCATGT 57.320 29.630 1.62 0.00 38.20 3.21
557 558 9.650539 TGTTCTTCAATCATTTGAAAAACTTCA 57.349 25.926 14.96 0.00 46.17 3.02
609 610 8.974408 GCATTTGAAAAAGGTAGAAAACGTATT 58.026 29.630 0.00 0.00 0.00 1.89
610 611 8.357402 AGCATTTGAAAAAGGTAGAAAACGTAT 58.643 29.630 0.00 0.00 0.00 3.06
611 612 7.708998 AGCATTTGAAAAAGGTAGAAAACGTA 58.291 30.769 0.00 0.00 0.00 3.57
612 613 6.569780 AGCATTTGAAAAAGGTAGAAAACGT 58.430 32.000 0.00 0.00 0.00 3.99
613 614 7.221838 TGAAGCATTTGAAAAAGGTAGAAAACG 59.778 33.333 0.00 0.00 0.00 3.60
614 615 8.419076 TGAAGCATTTGAAAAAGGTAGAAAAC 57.581 30.769 0.00 0.00 0.00 2.43
676 677 9.128107 CGTATTTGAAAAGTGTTAATCAAGCAT 57.872 29.630 0.00 0.00 33.71 3.79
677 678 8.132362 ACGTATTTGAAAAGTGTTAATCAAGCA 58.868 29.630 0.00 0.00 33.71 3.91
678 679 8.417176 CACGTATTTGAAAAGTGTTAATCAAGC 58.583 33.333 0.00 0.00 33.71 4.01
679 680 9.445786 ACACGTATTTGAAAAGTGTTAATCAAG 57.554 29.630 10.04 0.00 42.56 3.02
732 733 9.967346 TCATGTCCACGAAAAATTTATACAAAA 57.033 25.926 0.00 0.00 0.00 2.44
733 734 9.619316 CTCATGTCCACGAAAAATTTATACAAA 57.381 29.630 0.00 0.00 0.00 2.83
734 735 9.004717 TCTCATGTCCACGAAAAATTTATACAA 57.995 29.630 0.00 0.00 0.00 2.41
735 736 8.554835 TCTCATGTCCACGAAAAATTTATACA 57.445 30.769 0.00 0.00 0.00 2.29
736 737 9.834628 TTTCTCATGTCCACGAAAAATTTATAC 57.165 29.630 0.00 0.00 0.00 1.47
737 738 9.834628 GTTTCTCATGTCCACGAAAAATTTATA 57.165 29.630 0.00 0.00 0.00 0.98
738 739 8.356657 TGTTTCTCATGTCCACGAAAAATTTAT 58.643 29.630 0.00 0.00 0.00 1.40
739 740 7.708051 TGTTTCTCATGTCCACGAAAAATTTA 58.292 30.769 0.00 0.00 0.00 1.40
740 741 6.568869 TGTTTCTCATGTCCACGAAAAATTT 58.431 32.000 0.00 0.00 0.00 1.82
741 742 6.142818 TGTTTCTCATGTCCACGAAAAATT 57.857 33.333 0.00 0.00 0.00 1.82
742 743 5.766150 TGTTTCTCATGTCCACGAAAAAT 57.234 34.783 0.00 0.00 0.00 1.82
743 744 5.518812 CATGTTTCTCATGTCCACGAAAAA 58.481 37.500 0.00 0.00 46.18 1.94
744 745 5.107109 CATGTTTCTCATGTCCACGAAAA 57.893 39.130 0.00 0.00 46.18 2.29
745 746 4.747540 CATGTTTCTCATGTCCACGAAA 57.252 40.909 0.00 0.00 46.18 3.46
783 784 9.883142 TTGAGAACCAAGTATTTGAAAAATGTT 57.117 25.926 0.00 0.00 36.36 2.71
860 861 9.921637 TTTTCACTTCTGTTTGTAGTTCAAAAT 57.078 25.926 0.00 0.00 45.84 1.82
861 862 9.751542 TTTTTCACTTCTGTTTGTAGTTCAAAA 57.248 25.926 0.00 0.00 45.84 2.44
906 907 1.029681 GGAGCCACAACCTCGTTTTT 58.970 50.000 0.00 0.00 0.00 1.94
907 908 0.822121 GGGAGCCACAACCTCGTTTT 60.822 55.000 0.00 0.00 0.00 2.43
908 909 1.228154 GGGAGCCACAACCTCGTTT 60.228 57.895 0.00 0.00 0.00 3.60
909 910 2.430367 GGGAGCCACAACCTCGTT 59.570 61.111 0.00 0.00 0.00 3.85
910 911 4.003788 CGGGAGCCACAACCTCGT 62.004 66.667 0.00 0.00 0.00 4.18
962 979 0.686441 TGAGACGGACATAGGGGTGG 60.686 60.000 0.00 0.00 0.00 4.61
972 989 4.083862 GGCTGGGGTGAGACGGAC 62.084 72.222 0.00 0.00 0.00 4.79
994 1011 3.311110 GGAGCGACCAGTGTGGGA 61.311 66.667 0.00 0.00 43.37 4.37
997 1014 2.126307 CTCGGAGCGACCAGTGTG 60.126 66.667 0.00 0.00 38.90 3.82
998 1015 0.892358 TAACTCGGAGCGACCAGTGT 60.892 55.000 4.58 1.89 38.90 3.55
999 1016 0.179161 CTAACTCGGAGCGACCAGTG 60.179 60.000 4.58 0.00 38.90 3.66
1000 1017 1.313812 CCTAACTCGGAGCGACCAGT 61.314 60.000 4.58 3.88 38.90 4.00
1001 1018 1.433879 CCTAACTCGGAGCGACCAG 59.566 63.158 4.58 0.00 38.90 4.00
1002 1019 2.707849 GCCTAACTCGGAGCGACCA 61.708 63.158 4.58 0.00 38.90 4.02
1003 1020 2.104530 GCCTAACTCGGAGCGACC 59.895 66.667 4.58 0.00 0.00 4.79
1024 1041 4.222847 GATCGGTGGCGGAGGTCC 62.223 72.222 0.00 0.00 0.00 4.46
1060 1077 1.226888 GGCCTAATCGAAGCGACGT 60.227 57.895 0.00 0.00 39.18 4.34
1102 1122 1.204704 TCCAGGCTAACATCAGACACG 59.795 52.381 0.00 0.00 0.00 4.49
1227 1247 0.399454 CACAGATAGGGATGGGCAGG 59.601 60.000 0.00 0.00 0.00 4.85
1289 1313 3.442977 AGAGCAGGAATTTTGCAGCTTAG 59.557 43.478 15.51 0.00 41.11 2.18
1389 1425 7.359765 CCAATTGAAGAACATTTTGCAGCTTAG 60.360 37.037 7.12 0.00 0.00 2.18
1482 1522 7.901029 TCCTAAGAACTCTGGCAGATATATTG 58.099 38.462 19.11 7.67 0.00 1.90
1494 1583 1.134551 GGGCTGCTCCTAAGAACTCTG 60.135 57.143 0.00 0.00 34.39 3.35
1566 1691 5.986135 CGGAGGGAGTACTGAAAATATGAAG 59.014 44.000 0.00 0.00 0.00 3.02
1571 1696 4.587684 GGATCGGAGGGAGTACTGAAAATA 59.412 45.833 0.00 0.00 0.00 1.40
1577 1702 2.002505 ATGGATCGGAGGGAGTACTG 57.997 55.000 0.00 0.00 0.00 2.74
1661 1786 2.128035 CTACCCATCGTCGCTGATTTC 58.872 52.381 0.00 0.00 0.00 2.17
1676 1801 8.863872 AACCATAGACATAATAAATGCTACCC 57.136 34.615 0.00 0.00 0.00 3.69
1771 2157 2.812591 GGCTATCAGTTCATCATGCAGG 59.187 50.000 0.00 0.00 0.00 4.85
1772 2158 3.741249 AGGCTATCAGTTCATCATGCAG 58.259 45.455 0.00 0.00 0.00 4.41
1773 2159 3.390311 AGAGGCTATCAGTTCATCATGCA 59.610 43.478 0.00 0.00 0.00 3.96
1789 2175 2.172293 CTGAGGGCAATAAGAAGAGGCT 59.828 50.000 0.00 0.00 0.00 4.58
2032 2418 7.277319 CAGCATTACAGCAGTGTATATAGATGG 59.723 40.741 0.00 0.00 38.98 3.51
2188 2574 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
2189 2575 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
2190 2576 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
2191 2577 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
2192 2578 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
2193 2579 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
2194 2580 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
2195 2581 1.550976 GTAGGGAGGACTTCACCACTG 59.449 57.143 0.00 0.00 0.00 3.66
2196 2582 1.433592 AGTAGGGAGGACTTCACCACT 59.566 52.381 0.00 0.00 0.00 4.00
2197 2583 1.939980 AGTAGGGAGGACTTCACCAC 58.060 55.000 0.00 0.00 0.00 4.16
2198 2584 2.257207 CAAGTAGGGAGGACTTCACCA 58.743 52.381 0.00 0.00 34.90 4.17
2199 2585 2.028020 CACAAGTAGGGAGGACTTCACC 60.028 54.545 0.00 0.00 34.90 4.02
2200 2586 2.613223 GCACAAGTAGGGAGGACTTCAC 60.613 54.545 0.00 0.00 34.90 3.18
2201 2587 1.623811 GCACAAGTAGGGAGGACTTCA 59.376 52.381 0.00 0.00 34.90 3.02
2202 2588 1.066071 GGCACAAGTAGGGAGGACTTC 60.066 57.143 0.00 0.00 34.90 3.01
2203 2589 0.984995 GGCACAAGTAGGGAGGACTT 59.015 55.000 0.00 0.00 37.64 3.01
2204 2590 0.178903 TGGCACAAGTAGGGAGGACT 60.179 55.000 0.00 0.00 31.92 3.85
2205 2591 2.372852 TGGCACAAGTAGGGAGGAC 58.627 57.895 0.00 0.00 31.92 3.85
2206 2592 4.989458 TGGCACAAGTAGGGAGGA 57.011 55.556 0.00 0.00 31.92 3.71
2217 2603 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
2218 2604 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
2219 2605 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
2220 2606 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
2221 2607 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
2222 2608 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
2223 2609 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
2224 2610 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
2225 2611 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
2226 2612 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
2235 2621 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2236 2622 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2237 2623 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2238 2624 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2239 2625 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2240 2626 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2241 2627 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2242 2628 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2244 2630 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2245 2631 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2246 2632 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2247 2633 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2258 2644 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2259 2645 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2260 2646 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2261 2647 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2262 2648 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2263 2649 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2264 2650 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2265 2651 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2266 2652 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2267 2653 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2268 2654 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2269 2655 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2270 2656 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2271 2657 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2272 2658 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2273 2659 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2274 2660 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2275 2661 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2276 2662 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2277 2663 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2278 2664 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2279 2665 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2280 2666 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2281 2667 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2282 2668 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2283 2669 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2284 2670 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2285 2671 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2286 2672 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2287 2673 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2288 2674 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2289 2675 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2290 2676 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2291 2677 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2293 2679 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2294 2680 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2295 2681 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2296 2682 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2297 2683 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2298 2684 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2299 2685 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2307 2693 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2308 2694 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2309 2695 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2310 2696 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2311 2697 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2312 2698 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2313 2699 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2314 2700 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2315 2701 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2316 2702 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2317 2703 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2318 2704 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2319 2705 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2320 2706 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2321 2707 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2322 2708 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2323 2709 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2324 2710 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2325 2711 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
2326 2712 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
2327 2713 1.347707 CTAAAGGACAGACCCAGTGCA 59.652 52.381 0.00 0.00 40.05 4.57
2328 2714 1.623811 TCTAAAGGACAGACCCAGTGC 59.376 52.381 0.00 0.00 40.05 4.40
2329 2715 5.129485 ACATATCTAAAGGACAGACCCAGTG 59.871 44.000 0.00 0.00 40.05 3.66
2330 2716 5.281314 ACATATCTAAAGGACAGACCCAGT 58.719 41.667 0.00 0.00 40.05 4.00
2331 2717 5.878406 ACATATCTAAAGGACAGACCCAG 57.122 43.478 0.00 0.00 40.05 4.45
2332 2718 5.104527 CCAACATATCTAAAGGACAGACCCA 60.105 44.000 0.00 0.00 40.05 4.51
2333 2719 5.368989 CCAACATATCTAAAGGACAGACCC 58.631 45.833 0.00 0.00 40.05 4.46
2334 2720 4.816925 GCCAACATATCTAAAGGACAGACC 59.183 45.833 0.00 0.00 39.35 3.85
2335 2721 4.508124 CGCCAACATATCTAAAGGACAGAC 59.492 45.833 0.00 0.00 0.00 3.51
2336 2722 4.404394 TCGCCAACATATCTAAAGGACAGA 59.596 41.667 0.00 0.00 0.00 3.41
2337 2723 4.508124 GTCGCCAACATATCTAAAGGACAG 59.492 45.833 0.00 0.00 0.00 3.51
2338 2724 4.161565 AGTCGCCAACATATCTAAAGGACA 59.838 41.667 0.00 0.00 0.00 4.02
2339 2725 4.694339 AGTCGCCAACATATCTAAAGGAC 58.306 43.478 0.00 0.00 0.00 3.85
2340 2726 5.353394 AAGTCGCCAACATATCTAAAGGA 57.647 39.130 0.00 0.00 0.00 3.36
2341 2727 4.511826 GGAAGTCGCCAACATATCTAAAGG 59.488 45.833 0.00 0.00 0.00 3.11
2342 2728 5.360591 AGGAAGTCGCCAACATATCTAAAG 58.639 41.667 0.00 0.00 0.00 1.85
2343 2729 5.353394 AGGAAGTCGCCAACATATCTAAA 57.647 39.130 0.00 0.00 0.00 1.85
2344 2730 5.831525 TCTAGGAAGTCGCCAACATATCTAA 59.168 40.000 0.00 0.00 0.00 2.10
2345 2731 5.382616 TCTAGGAAGTCGCCAACATATCTA 58.617 41.667 0.00 0.00 0.00 1.98
2346 2732 4.215908 TCTAGGAAGTCGCCAACATATCT 58.784 43.478 0.00 0.00 0.00 1.98
2347 2733 4.585955 TCTAGGAAGTCGCCAACATATC 57.414 45.455 0.00 0.00 0.00 1.63
2348 2734 4.262635 CCATCTAGGAAGTCGCCAACATAT 60.263 45.833 0.00 0.00 41.22 1.78
2349 2735 3.069586 CCATCTAGGAAGTCGCCAACATA 59.930 47.826 0.00 0.00 41.22 2.29
2350 2736 2.158900 CCATCTAGGAAGTCGCCAACAT 60.159 50.000 0.00 0.00 41.22 2.71
2351 2737 1.207089 CCATCTAGGAAGTCGCCAACA 59.793 52.381 0.00 0.00 41.22 3.33
2352 2738 1.207329 ACCATCTAGGAAGTCGCCAAC 59.793 52.381 0.00 0.00 41.22 3.77
2353 2739 1.480954 GACCATCTAGGAAGTCGCCAA 59.519 52.381 0.00 0.00 41.22 4.52
2354 2740 1.112113 GACCATCTAGGAAGTCGCCA 58.888 55.000 0.00 0.00 41.22 5.69
2355 2741 1.067821 CTGACCATCTAGGAAGTCGCC 59.932 57.143 0.00 0.00 41.22 5.54
2356 2742 2.025155 TCTGACCATCTAGGAAGTCGC 58.975 52.381 0.00 0.00 41.22 5.19
2357 2743 2.034053 GCTCTGACCATCTAGGAAGTCG 59.966 54.545 0.00 0.00 41.22 4.18
2358 2744 3.027412 TGCTCTGACCATCTAGGAAGTC 58.973 50.000 0.00 0.00 41.22 3.01
2359 2745 3.107402 TGCTCTGACCATCTAGGAAGT 57.893 47.619 0.00 0.00 41.22 3.01
2360 2746 3.803021 GCATGCTCTGACCATCTAGGAAG 60.803 52.174 11.37 0.00 41.22 3.46
2361 2747 2.103771 GCATGCTCTGACCATCTAGGAA 59.896 50.000 11.37 0.00 41.22 3.36
2362 2748 1.690893 GCATGCTCTGACCATCTAGGA 59.309 52.381 11.37 0.00 41.22 2.94
2366 2752 2.396608 ACTAGCATGCTCTGACCATCT 58.603 47.619 26.57 0.00 0.00 2.90
2368 2754 5.105023 CCATATACTAGCATGCTCTGACCAT 60.105 44.000 26.57 12.20 0.00 3.55
2371 2757 4.221703 ACCCATATACTAGCATGCTCTGAC 59.778 45.833 26.57 0.00 0.00 3.51
2411 2797 0.389817 TCCGCAGACAATCCAACTCG 60.390 55.000 0.00 0.00 0.00 4.18
2429 2815 8.470805 TCTCTAGGACAGTTGAAGATGTAATTC 58.529 37.037 0.00 0.00 0.00 2.17
2917 3322 8.065473 AGATTACAGGATAGCAGAGTATCATG 57.935 38.462 4.39 4.39 43.64 3.07
2924 3329 5.123186 CCTCGTAGATTACAGGATAGCAGAG 59.877 48.000 0.00 0.00 33.89 3.35
2993 3398 0.681175 GGCCAACACATTTCCTGCTT 59.319 50.000 0.00 0.00 0.00 3.91
3167 3573 2.870411 CAACGTCCGGGAATCCTATTTC 59.130 50.000 0.00 0.00 0.00 2.17
3514 3921 6.436027 AGAAGAAGTAGACCCATCATACAGA 58.564 40.000 0.00 0.00 0.00 3.41
3619 4029 2.953466 TGTGCACCGTATCCTTAGAC 57.047 50.000 15.69 0.00 0.00 2.59
3682 4107 3.388308 CTCTCCATCGATCACAACATCC 58.612 50.000 0.00 0.00 0.00 3.51
3694 4119 2.107141 GGTTCCGGCTCTCCATCG 59.893 66.667 0.00 0.00 0.00 3.84
3746 4171 6.076981 ACCACTGTCAAATGAACATTTCTC 57.923 37.500 9.42 6.92 38.84 2.87
3775 4200 0.876399 TGAACTCGTCACCGATCGAA 59.124 50.000 18.66 0.00 43.27 3.71
3837 4262 4.700213 CAGGAAGAAAACATACCACCGATT 59.300 41.667 0.00 0.00 0.00 3.34
3990 4419 3.013921 GGATATTTGCCGTTTCCACTCA 58.986 45.455 0.00 0.00 0.00 3.41
4005 4434 8.599624 ACAATTTGATCTGGAACAAGGATATT 57.400 30.769 2.79 0.00 38.70 1.28
4026 4455 5.934625 ACAAGAAGAAGAACGATGCTACAAT 59.065 36.000 0.00 0.00 0.00 2.71
4036 4465 6.642950 AGTGATGACTAACAAGAAGAAGAACG 59.357 38.462 0.00 0.00 0.00 3.95
4095 4524 1.342174 AGAGTACTCCAAACGGCGAAA 59.658 47.619 19.38 0.00 0.00 3.46
4097 4526 0.242825 CAGAGTACTCCAAACGGCGA 59.757 55.000 19.38 0.00 0.00 5.54
4127 4567 5.180492 CGGAACAACATATACACACAAAGGT 59.820 40.000 0.00 0.00 0.00 3.50
4128 4568 5.410132 TCGGAACAACATATACACACAAAGG 59.590 40.000 0.00 0.00 0.00 3.11
4129 4569 6.474819 TCGGAACAACATATACACACAAAG 57.525 37.500 0.00 0.00 0.00 2.77
4130 4570 6.651225 TCATCGGAACAACATATACACACAAA 59.349 34.615 0.00 0.00 0.00 2.83
4131 4571 6.091577 GTCATCGGAACAACATATACACACAA 59.908 38.462 0.00 0.00 0.00 3.33
4132 4572 5.579119 GTCATCGGAACAACATATACACACA 59.421 40.000 0.00 0.00 0.00 3.72
4137 4577 5.692204 CAGGAGTCATCGGAACAACATATAC 59.308 44.000 0.00 0.00 0.00 1.47
4152 4592 3.306780 CGGAGTAACAAACCAGGAGTCAT 60.307 47.826 0.00 0.00 0.00 3.06
4201 4641 3.536956 ACGTCAACAAGAGAGAACCAA 57.463 42.857 0.00 0.00 0.00 3.67
4448 4893 6.640518 TCAACTATATCACAGTTCAACCTCC 58.359 40.000 0.00 0.00 33.99 4.30
4582 5030 6.190346 TGTAAACCTTAAGGGCTTCAGTTA 57.810 37.500 25.31 8.74 40.27 2.24
4653 5101 1.827789 GCTGTTGAACCACCTGCCA 60.828 57.895 0.00 0.00 0.00 4.92
4657 5105 0.546122 TGTGAGCTGTTGAACCACCT 59.454 50.000 0.00 0.00 0.00 4.00
4672 5120 1.416772 TGGGTTTGTATCGGTGTGTGA 59.583 47.619 0.00 0.00 0.00 3.58
4764 5213 0.176680 GCATTCTTCGGCTCTCAGGA 59.823 55.000 0.00 0.00 0.00 3.86
4799 5257 3.002791 TGTCGATCATTGAAGCCTTCAC 58.997 45.455 6.65 0.00 39.87 3.18
4865 5323 3.448660 GCTGAGGGCCTTTACAAAATGAT 59.551 43.478 7.89 0.00 34.27 2.45
4878 5336 1.607467 AAACACCATGCTGAGGGCC 60.607 57.895 0.00 0.00 40.92 5.80
4882 5340 1.608055 TCACCAAACACCATGCTGAG 58.392 50.000 0.00 0.00 0.00 3.35
4898 5356 4.631813 AGCTCGTATTGAAAGGATGTTCAC 59.368 41.667 0.00 0.00 37.24 3.18
4908 5366 4.989797 TCCGTAACAAAGCTCGTATTGAAA 59.010 37.500 2.92 0.00 0.00 2.69
4913 5371 3.795101 CGAATCCGTAACAAAGCTCGTAT 59.205 43.478 0.00 0.00 0.00 3.06
4937 5395 2.549992 CGGCTATAGCTTGGGTTGCATA 60.550 50.000 23.53 0.00 41.70 3.14
4940 5398 1.786049 GCGGCTATAGCTTGGGTTGC 61.786 60.000 23.53 12.30 41.70 4.17
4955 5413 4.700365 GTGGCTTGGTTTCGCGGC 62.700 66.667 6.13 0.00 0.00 6.53
4958 5416 0.385098 GTTACGTGGCTTGGTTTCGC 60.385 55.000 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.