Multiple sequence alignment - TraesCS1A01G321200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G321200 chr1A 100.000 2402 0 0 1 2402 511621816 511619415 0.000000e+00 4436
1 TraesCS1A01G321200 chr1A 97.647 340 8 0 1817 2156 459176243 459175904 3.440000e-163 584
2 TraesCS1A01G321200 chr6B 86.702 1128 122 12 295 1403 659588424 659589542 0.000000e+00 1227
3 TraesCS1A01G321200 chr6B 78.308 1111 187 28 330 1406 550272896 550273986 0.000000e+00 667
4 TraesCS1A01G321200 chr6B 87.143 210 18 7 1409 1610 659589919 659590127 1.860000e-56 230
5 TraesCS1A01G321200 chr6B 91.473 129 11 0 2193 2321 659590153 659590281 6.820000e-41 178
6 TraesCS1A01G321200 chr6D 87.946 1037 94 20 379 1406 436343878 436344892 0.000000e+00 1194
7 TraesCS1A01G321200 chr6D 87.019 909 79 13 507 1406 436454404 436453526 0.000000e+00 989
8 TraesCS1A01G321200 chr6D 79.556 1081 172 36 344 1403 365449047 365450099 0.000000e+00 726
9 TraesCS1A01G321200 chrUn 92.943 666 35 5 371 1032 7334885 7335542 0.000000e+00 959
10 TraesCS1A01G321200 chrUn 93.607 219 14 0 120 338 7334671 7334889 6.400000e-86 327
11 TraesCS1A01G321200 chrUn 92.500 120 4 4 2157 2273 7335667 7335784 1.480000e-37 167
12 TraesCS1A01G321200 chrUn 93.578 109 4 1 1502 1607 7335573 7335681 2.470000e-35 159
13 TraesCS1A01G321200 chr1B 92.604 676 36 7 371 1040 560313489 560312822 0.000000e+00 959
14 TraesCS1A01G321200 chr1B 93.607 219 14 0 120 338 560313703 560313485 6.400000e-86 327
15 TraesCS1A01G321200 chr1B 92.500 120 4 4 2157 2273 560312707 560312590 1.480000e-37 167
16 TraesCS1A01G321200 chr1B 93.578 109 4 1 1502 1607 560312801 560312693 2.470000e-35 159
17 TraesCS1A01G321200 chr1D 92.998 457 27 3 14 467 414891593 414891139 0.000000e+00 662
18 TraesCS1A01G321200 chr1D 91.824 477 18 7 627 1089 414884064 414883595 0.000000e+00 645
19 TraesCS1A01G321200 chr1D 92.780 277 20 0 1128 1404 414883596 414883320 3.720000e-108 401
20 TraesCS1A01G321200 chr1D 92.135 178 12 1 2176 2351 414882898 414882721 1.430000e-62 250
21 TraesCS1A01G321200 chr1D 85.024 207 8 6 1405 1607 414883111 414882924 3.150000e-44 189
22 TraesCS1A01G321200 chr3A 97.971 345 6 1 1817 2161 732630558 732630901 4.420000e-167 597
23 TraesCS1A01G321200 chr3A 98.235 340 6 0 1817 2156 732625063 732625402 1.590000e-166 595
24 TraesCS1A01G321200 chr3A 96.347 219 8 0 1598 1816 437637014 437637232 6.310000e-96 361
25 TraesCS1A01G321200 chr5A 97.941 340 7 0 1817 2156 469658249 469658588 7.400000e-165 590
26 TraesCS1A01G321200 chr5A 96.364 220 8 0 1597 1816 352471608 352471827 1.760000e-96 363
27 TraesCS1A01G321200 chr5A 95.516 223 10 0 1594 1816 705610287 705610065 8.170000e-95 357
28 TraesCS1A01G321200 chr7A 97.647 340 8 0 1817 2156 705305189 705304850 3.440000e-163 584
29 TraesCS1A01G321200 chr7A 96.839 348 10 1 1817 2164 705299731 705299385 4.450000e-162 580
30 TraesCS1A01G321200 chr7A 96.313 217 8 0 1598 1814 116829718 116829502 8.170000e-95 357
31 TraesCS1A01G321200 chr7A 91.532 248 18 3 1569 1816 682949587 682949831 2.960000e-89 339
32 TraesCS1A01G321200 chr2A 97.647 340 8 0 1817 2156 727251907 727251568 3.440000e-163 584
33 TraesCS1A01G321200 chr2A 96.347 219 8 0 1598 1816 69902636 69902854 6.310000e-96 361
34 TraesCS1A01G321200 chr2A 96.347 219 8 0 1598 1816 197906858 197906640 6.310000e-96 361
35 TraesCS1A01G321200 chr6A 97.353 340 9 0 1817 2156 121679385 121679046 1.600000e-161 579
36 TraesCS1A01G321200 chr4A 96.542 347 11 1 1817 2163 500637887 500638232 7.450000e-160 573
37 TraesCS1A01G321200 chr4A 95.928 221 9 0 1594 1814 5013613 5013833 2.270000e-95 359
38 TraesCS1A01G321200 chr4A 94.714 227 12 0 1590 1816 166312606 166312380 1.060000e-93 353


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G321200 chr1A 511619415 511621816 2401 True 4436.00 4436 100.000000 1 2402 1 chr1A.!!$R2 2401
1 TraesCS1A01G321200 chr6B 550272896 550273986 1090 False 667.00 667 78.308000 330 1406 1 chr6B.!!$F1 1076
2 TraesCS1A01G321200 chr6B 659588424 659590281 1857 False 545.00 1227 88.439333 295 2321 3 chr6B.!!$F2 2026
3 TraesCS1A01G321200 chr6D 436343878 436344892 1014 False 1194.00 1194 87.946000 379 1406 1 chr6D.!!$F2 1027
4 TraesCS1A01G321200 chr6D 436453526 436454404 878 True 989.00 989 87.019000 507 1406 1 chr6D.!!$R1 899
5 TraesCS1A01G321200 chr6D 365449047 365450099 1052 False 726.00 726 79.556000 344 1403 1 chr6D.!!$F1 1059
6 TraesCS1A01G321200 chrUn 7334671 7335784 1113 False 403.00 959 93.157000 120 2273 4 chrUn.!!$F1 2153
7 TraesCS1A01G321200 chr1B 560312590 560313703 1113 True 403.00 959 93.072250 120 2273 4 chr1B.!!$R1 2153
8 TraesCS1A01G321200 chr1D 414882721 414884064 1343 True 371.25 645 90.440750 627 2351 4 chr1D.!!$R2 1724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 411 0.387202 CGTTGTGCACAATTTGGGGA 59.613 50.0 33.16 7.57 38.24 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 2464 0.029567 CGAGATCGGGGAAGAAGTCG 59.97 60.0 0.0 0.0 35.37 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 109 8.389779 TGCAAAGTGTATGAAAAAGATAGACA 57.610 30.769 0.00 0.00 0.00 3.41
109 110 9.013229 TGCAAAGTGTATGAAAAAGATAGACAT 57.987 29.630 0.00 0.00 0.00 3.06
110 111 9.495754 GCAAAGTGTATGAAAAAGATAGACATC 57.504 33.333 0.00 0.00 0.00 3.06
116 117 9.942850 TGTATGAAAAAGATAGACATCAGAACA 57.057 29.630 0.00 0.00 33.21 3.18
133 134 7.561021 TCAGAACATGTAGCTGTTTGTTAAA 57.439 32.000 21.29 4.31 39.40 1.52
138 139 8.628882 AACATGTAGCTGTTTGTTAAAAAGAC 57.371 30.769 0.00 0.00 35.90 3.01
182 183 3.564235 TTCTCAAATGACACTGCATGC 57.436 42.857 11.82 11.82 0.00 4.06
195 196 2.363359 ACTGCATGCACATATCTCGAGA 59.637 45.455 18.46 19.19 0.00 4.04
197 198 3.323243 TGCATGCACATATCTCGAGATG 58.677 45.455 33.22 23.30 36.05 2.90
203 204 3.058570 GCACATATCTCGAGATGACGTCT 60.059 47.826 33.22 12.48 40.81 4.18
208 209 1.943340 TCTCGAGATGACGTCTGATGG 59.057 52.381 17.92 3.73 37.29 3.51
228 229 2.311463 GCAGATAGGAGTGGAGCTACA 58.689 52.381 0.00 0.00 0.00 2.74
257 258 7.947890 TCCATGGTTGTCCTAAATATTATTCCC 59.052 37.037 12.58 0.00 34.23 3.97
259 260 6.300703 TGGTTGTCCTAAATATTATTCCCCG 58.699 40.000 0.00 0.00 34.23 5.73
267 268 6.766467 CCTAAATATTATTCCCCGGCAGTATC 59.234 42.308 0.00 0.00 0.00 2.24
273 274 1.227263 CCCCGGCAGTATCTGAACG 60.227 63.158 0.00 4.53 34.77 3.95
354 393 1.667724 GATGACTTGATGGTCTTGCCG 59.332 52.381 0.00 0.00 41.21 5.69
369 408 0.529337 TGCCGTTGTGCACAATTTGG 60.529 50.000 33.16 30.96 38.24 3.28
372 411 0.387202 CGTTGTGCACAATTTGGGGA 59.613 50.000 33.16 7.57 38.24 4.81
386 425 5.852282 ATTTGGGGATGTAGCATGTAAAC 57.148 39.130 0.00 0.00 0.00 2.01
413 452 3.745975 CGTTCTGTGCATTAGTTTGAGGA 59.254 43.478 0.00 0.00 0.00 3.71
478 527 1.069765 CGGCTTATGATCGCCCAGT 59.930 57.895 4.04 0.00 43.38 4.00
488 539 1.449726 ATCGCCCAGTACGTCGCATA 61.450 55.000 0.00 0.00 0.00 3.14
490 541 1.140161 GCCCAGTACGTCGCATACA 59.860 57.895 0.00 0.00 0.00 2.29
527 579 1.478105 GGTTCATTGCATCCCTTGGAC 59.522 52.381 0.00 0.00 32.98 4.02
586 656 5.009610 ACTTTATTTACACTTGGTGCTGTGG 59.990 40.000 0.00 0.00 36.98 4.17
703 779 1.340248 TCTGAAACCTCGACACTCCAC 59.660 52.381 0.00 0.00 0.00 4.02
794 876 2.470781 GCGTCGTCTTGAAGTCGAATTG 60.471 50.000 15.37 9.96 37.50 2.32
801 883 3.686241 TCTTGAAGTCGAATTGCCATCAG 59.314 43.478 1.32 0.00 0.00 2.90
803 885 3.877559 TGAAGTCGAATTGCCATCAGAT 58.122 40.909 1.32 0.00 0.00 2.90
821 903 4.081420 TCAGATGTCAACCTTAAGAGAGCC 60.081 45.833 3.36 0.00 0.00 4.70
842 926 0.905337 AGCTAACCCGCTGACTTCCT 60.905 55.000 0.00 0.00 39.16 3.36
876 960 8.580720 GCTCTCTTCTATATAAAGTGTGATGGA 58.419 37.037 9.98 0.00 0.00 3.41
964 1066 2.299867 AGCCACAAACCAATAAGCCAAG 59.700 45.455 0.00 0.00 0.00 3.61
992 1097 3.935828 GCATTACTTCTCCTTGTCTCCAC 59.064 47.826 0.00 0.00 0.00 4.02
993 1098 4.563580 GCATTACTTCTCCTTGTCTCCACA 60.564 45.833 0.00 0.00 0.00 4.17
994 1099 5.551233 CATTACTTCTCCTTGTCTCCACAA 58.449 41.667 0.00 0.00 40.40 3.33
995 1100 3.477210 ACTTCTCCTTGTCTCCACAAC 57.523 47.619 0.00 0.00 37.61 3.32
996 1101 2.104963 ACTTCTCCTTGTCTCCACAACC 59.895 50.000 0.00 0.00 37.61 3.77
997 1102 1.801242 TCTCCTTGTCTCCACAACCA 58.199 50.000 0.00 0.00 37.61 3.67
1039 1147 1.761198 CTCTCCTCATCATGGTGCTGA 59.239 52.381 0.00 0.00 0.00 4.26
1361 1469 2.430465 CACCTGCTCTAACAAGTGCAT 58.570 47.619 2.95 0.00 37.61 3.96
1412 1983 6.376978 ACTACGCGCAGTAATTAACCTATAG 58.623 40.000 11.00 0.00 34.45 1.31
1413 1986 4.553323 ACGCGCAGTAATTAACCTATAGG 58.447 43.478 17.73 17.73 42.17 2.57
1480 2053 3.009723 ACTGATATTGTGGCCGTTGAAG 58.990 45.455 0.00 0.00 0.00 3.02
1484 2057 4.814234 TGATATTGTGGCCGTTGAAGATAC 59.186 41.667 0.00 0.00 0.00 2.24
1486 2059 0.687920 TGTGGCCGTTGAAGATACCA 59.312 50.000 0.00 0.00 0.00 3.25
1490 2063 3.004944 GTGGCCGTTGAAGATACCAAAAA 59.995 43.478 0.00 0.00 0.00 1.94
1521 2094 3.441222 TGTGGCAATGATTTCTGCTAGTG 59.559 43.478 0.00 0.00 38.65 2.74
1601 2180 4.000331 AGATGGTGAGTCTGAACTGTTG 58.000 45.455 0.00 0.00 35.28 3.33
1607 2186 5.652014 TGGTGAGTCTGAACTGTTGAAATTT 59.348 36.000 0.00 0.00 35.28 1.82
1608 2187 6.152661 TGGTGAGTCTGAACTGTTGAAATTTT 59.847 34.615 0.00 0.00 35.28 1.82
1609 2188 6.473455 GGTGAGTCTGAACTGTTGAAATTTTG 59.527 38.462 0.00 0.00 35.28 2.44
1610 2189 6.020360 GTGAGTCTGAACTGTTGAAATTTTGC 60.020 38.462 0.00 0.00 35.28 3.68
1611 2190 6.127647 TGAGTCTGAACTGTTGAAATTTTGCT 60.128 34.615 0.00 0.00 35.28 3.91
1612 2191 7.066887 TGAGTCTGAACTGTTGAAATTTTGCTA 59.933 33.333 0.00 0.00 35.28 3.49
1613 2192 7.420800 AGTCTGAACTGTTGAAATTTTGCTAG 58.579 34.615 0.00 0.00 33.32 3.42
1614 2193 7.067494 AGTCTGAACTGTTGAAATTTTGCTAGT 59.933 33.333 0.00 0.00 33.32 2.57
1615 2194 8.342634 GTCTGAACTGTTGAAATTTTGCTAGTA 58.657 33.333 0.00 0.00 0.00 1.82
1616 2195 8.559536 TCTGAACTGTTGAAATTTTGCTAGTAG 58.440 33.333 0.00 0.00 0.00 2.57
1617 2196 7.648142 TGAACTGTTGAAATTTTGCTAGTAGG 58.352 34.615 0.00 0.00 0.00 3.18
1618 2197 6.013842 ACTGTTGAAATTTTGCTAGTAGGC 57.986 37.500 0.00 0.00 0.00 3.93
1619 2198 5.048013 ACTGTTGAAATTTTGCTAGTAGGCC 60.048 40.000 0.00 0.00 0.00 5.19
1620 2199 5.076873 TGTTGAAATTTTGCTAGTAGGCCT 58.923 37.500 11.78 11.78 0.00 5.19
1621 2200 5.538433 TGTTGAAATTTTGCTAGTAGGCCTT 59.462 36.000 12.58 0.00 0.00 4.35
1622 2201 6.041523 TGTTGAAATTTTGCTAGTAGGCCTTT 59.958 34.615 12.58 1.84 0.00 3.11
1623 2202 6.024552 TGAAATTTTGCTAGTAGGCCTTTG 57.975 37.500 12.58 0.00 0.00 2.77
1624 2203 5.047377 TGAAATTTTGCTAGTAGGCCTTTGG 60.047 40.000 12.58 2.81 0.00 3.28
1646 2225 5.139435 GCTCAAAGCCCAACTAAAATTCT 57.861 39.130 0.00 0.00 34.48 2.40
1647 2226 4.925646 GCTCAAAGCCCAACTAAAATTCTG 59.074 41.667 0.00 0.00 34.48 3.02
1648 2227 5.278957 GCTCAAAGCCCAACTAAAATTCTGA 60.279 40.000 0.00 0.00 34.48 3.27
1649 2228 6.723298 TCAAAGCCCAACTAAAATTCTGAA 57.277 33.333 0.00 0.00 0.00 3.02
1650 2229 7.118496 TCAAAGCCCAACTAAAATTCTGAAA 57.882 32.000 0.00 0.00 0.00 2.69
1651 2230 7.734942 TCAAAGCCCAACTAAAATTCTGAAAT 58.265 30.769 0.00 0.00 0.00 2.17
1652 2231 8.210265 TCAAAGCCCAACTAAAATTCTGAAATT 58.790 29.630 0.00 0.00 36.64 1.82
1653 2232 8.498358 CAAAGCCCAACTAAAATTCTGAAATTC 58.502 33.333 0.00 0.00 33.93 2.17
1654 2233 7.544804 AGCCCAACTAAAATTCTGAAATTCT 57.455 32.000 0.00 0.00 33.93 2.40
1655 2234 7.606349 AGCCCAACTAAAATTCTGAAATTCTC 58.394 34.615 0.00 0.00 33.93 2.87
1656 2235 7.452813 AGCCCAACTAAAATTCTGAAATTCTCT 59.547 33.333 0.00 0.00 33.93 3.10
1657 2236 8.090831 GCCCAACTAAAATTCTGAAATTCTCTT 58.909 33.333 0.00 0.00 33.93 2.85
1658 2237 9.415544 CCCAACTAAAATTCTGAAATTCTCTTG 57.584 33.333 0.00 0.00 33.93 3.02
1659 2238 9.415544 CCAACTAAAATTCTGAAATTCTCTTGG 57.584 33.333 0.00 1.19 33.93 3.61
1660 2239 8.919661 CAACTAAAATTCTGAAATTCTCTTGGC 58.080 33.333 0.00 0.00 33.93 4.52
1661 2240 8.414629 ACTAAAATTCTGAAATTCTCTTGGCT 57.585 30.769 0.00 0.00 33.93 4.75
1662 2241 8.518702 ACTAAAATTCTGAAATTCTCTTGGCTC 58.481 33.333 0.00 0.00 33.93 4.70
1663 2242 6.906157 AAATTCTGAAATTCTCTTGGCTCA 57.094 33.333 0.00 0.00 33.93 4.26
1664 2243 7.477945 AAATTCTGAAATTCTCTTGGCTCAT 57.522 32.000 0.00 0.00 33.93 2.90
1665 2244 7.477945 AATTCTGAAATTCTCTTGGCTCATT 57.522 32.000 0.00 0.00 28.70 2.57
1666 2245 6.506500 TTCTGAAATTCTCTTGGCTCATTC 57.493 37.500 0.00 0.00 0.00 2.67
1667 2246 5.563592 TCTGAAATTCTCTTGGCTCATTCA 58.436 37.500 0.00 0.00 0.00 2.57
1668 2247 6.185511 TCTGAAATTCTCTTGGCTCATTCAT 58.814 36.000 0.00 0.00 0.00 2.57
1669 2248 6.095021 TCTGAAATTCTCTTGGCTCATTCATG 59.905 38.462 0.00 0.00 0.00 3.07
1670 2249 4.650754 AATTCTCTTGGCTCATTCATGC 57.349 40.909 0.00 0.00 0.00 4.06
1671 2250 2.793288 TCTCTTGGCTCATTCATGCA 57.207 45.000 0.00 0.00 0.00 3.96
1672 2251 2.362736 TCTCTTGGCTCATTCATGCAC 58.637 47.619 0.00 0.00 0.00 4.57
1673 2252 2.089201 CTCTTGGCTCATTCATGCACA 58.911 47.619 0.00 0.00 0.00 4.57
1674 2253 1.814394 TCTTGGCTCATTCATGCACAC 59.186 47.619 0.00 0.00 0.00 3.82
1675 2254 1.542472 CTTGGCTCATTCATGCACACA 59.458 47.619 0.00 0.00 0.00 3.72
1676 2255 1.842052 TGGCTCATTCATGCACACAT 58.158 45.000 0.00 0.00 36.79 3.21
1690 2269 2.827800 ACACATGTGAGTGGAGTGAG 57.172 50.000 31.94 1.10 43.72 3.51
1691 2270 2.042464 ACACATGTGAGTGGAGTGAGT 58.958 47.619 31.94 1.87 43.72 3.41
1692 2271 2.224137 ACACATGTGAGTGGAGTGAGTG 60.224 50.000 31.94 0.49 43.72 3.51
1693 2272 2.036346 CACATGTGAGTGGAGTGAGTGA 59.964 50.000 21.64 0.00 35.88 3.41
1694 2273 2.298446 ACATGTGAGTGGAGTGAGTGAG 59.702 50.000 0.00 0.00 0.00 3.51
1695 2274 1.332195 TGTGAGTGGAGTGAGTGAGG 58.668 55.000 0.00 0.00 0.00 3.86
1696 2275 0.037790 GTGAGTGGAGTGAGTGAGGC 60.038 60.000 0.00 0.00 0.00 4.70
1697 2276 0.178950 TGAGTGGAGTGAGTGAGGCT 60.179 55.000 0.00 0.00 0.00 4.58
1698 2277 1.075536 TGAGTGGAGTGAGTGAGGCTA 59.924 52.381 0.00 0.00 0.00 3.93
1699 2278 2.171840 GAGTGGAGTGAGTGAGGCTAA 58.828 52.381 0.00 0.00 0.00 3.09
1700 2279 2.563179 GAGTGGAGTGAGTGAGGCTAAA 59.437 50.000 0.00 0.00 0.00 1.85
1701 2280 2.564947 AGTGGAGTGAGTGAGGCTAAAG 59.435 50.000 0.00 0.00 0.00 1.85
1702 2281 2.300437 GTGGAGTGAGTGAGGCTAAAGT 59.700 50.000 0.00 0.00 0.00 2.66
1703 2282 2.972713 TGGAGTGAGTGAGGCTAAAGTT 59.027 45.455 0.00 0.00 0.00 2.66
1704 2283 3.391296 TGGAGTGAGTGAGGCTAAAGTTT 59.609 43.478 0.00 0.00 0.00 2.66
1705 2284 4.591498 TGGAGTGAGTGAGGCTAAAGTTTA 59.409 41.667 0.00 0.00 0.00 2.01
1706 2285 5.172205 GGAGTGAGTGAGGCTAAAGTTTAG 58.828 45.833 16.87 16.87 0.00 1.85
1707 2286 5.279556 GGAGTGAGTGAGGCTAAAGTTTAGT 60.280 44.000 20.95 5.16 0.00 2.24
1708 2287 5.785243 AGTGAGTGAGGCTAAAGTTTAGTC 58.215 41.667 17.75 17.75 0.00 2.59
1709 2288 4.930405 GTGAGTGAGGCTAAAGTTTAGTCC 59.070 45.833 20.94 20.40 0.00 3.85
1710 2289 4.020485 TGAGTGAGGCTAAAGTTTAGTCCC 60.020 45.833 20.94 12.08 0.00 4.46
1711 2290 3.908103 AGTGAGGCTAAAGTTTAGTCCCA 59.092 43.478 20.94 14.48 0.00 4.37
1712 2291 4.536489 AGTGAGGCTAAAGTTTAGTCCCAT 59.464 41.667 20.94 5.52 0.00 4.00
1713 2292 4.876679 GTGAGGCTAAAGTTTAGTCCCATC 59.123 45.833 20.94 13.78 0.00 3.51
1714 2293 4.080526 TGAGGCTAAAGTTTAGTCCCATCC 60.081 45.833 20.94 13.24 0.00 3.51
1715 2294 3.202373 AGGCTAAAGTTTAGTCCCATCCC 59.798 47.826 20.94 12.64 0.00 3.85
1716 2295 3.203716 GCTAAAGTTTAGTCCCATCCCG 58.796 50.000 20.95 0.00 0.00 5.14
1717 2296 2.801077 AAAGTTTAGTCCCATCCCGG 57.199 50.000 0.00 0.00 0.00 5.73
1718 2297 1.961133 AAGTTTAGTCCCATCCCGGA 58.039 50.000 0.73 0.00 36.56 5.14
1719 2298 1.961133 AGTTTAGTCCCATCCCGGAA 58.039 50.000 0.73 0.00 36.56 4.30
1720 2299 1.838077 AGTTTAGTCCCATCCCGGAAG 59.162 52.381 0.73 0.00 36.56 3.46
1721 2300 1.558294 GTTTAGTCCCATCCCGGAAGT 59.442 52.381 0.73 0.00 36.56 3.01
1722 2301 1.961133 TTAGTCCCATCCCGGAAGTT 58.039 50.000 0.73 0.00 36.56 2.66
1723 2302 1.200519 TAGTCCCATCCCGGAAGTTG 58.799 55.000 0.73 0.00 36.56 3.16
1724 2303 0.546747 AGTCCCATCCCGGAAGTTGA 60.547 55.000 0.73 0.00 36.56 3.18
1725 2304 0.107654 GTCCCATCCCGGAAGTTGAG 60.108 60.000 0.73 0.00 36.56 3.02
1726 2305 0.252513 TCCCATCCCGGAAGTTGAGA 60.253 55.000 0.73 0.00 36.56 3.27
1727 2306 0.618458 CCCATCCCGGAAGTTGAGAA 59.382 55.000 0.73 0.00 36.56 2.87
1728 2307 1.004277 CCCATCCCGGAAGTTGAGAAA 59.996 52.381 0.73 0.00 36.56 2.52
1729 2308 2.359900 CCATCCCGGAAGTTGAGAAAG 58.640 52.381 0.73 0.00 36.56 2.62
1730 2309 2.027192 CCATCCCGGAAGTTGAGAAAGA 60.027 50.000 0.73 0.00 36.56 2.52
1731 2310 3.265791 CATCCCGGAAGTTGAGAAAGAG 58.734 50.000 0.73 0.00 0.00 2.85
1732 2311 2.326428 TCCCGGAAGTTGAGAAAGAGT 58.674 47.619 0.73 0.00 0.00 3.24
1733 2312 2.704065 TCCCGGAAGTTGAGAAAGAGTT 59.296 45.455 0.73 0.00 0.00 3.01
1734 2313 2.808543 CCCGGAAGTTGAGAAAGAGTTG 59.191 50.000 0.73 0.00 0.00 3.16
1735 2314 2.224314 CCGGAAGTTGAGAAAGAGTTGC 59.776 50.000 0.00 0.00 0.00 4.17
1736 2315 2.872245 CGGAAGTTGAGAAAGAGTTGCA 59.128 45.455 0.00 0.00 0.00 4.08
1737 2316 3.303395 CGGAAGTTGAGAAAGAGTTGCAC 60.303 47.826 0.00 0.00 0.00 4.57
1738 2317 3.879892 GGAAGTTGAGAAAGAGTTGCACT 59.120 43.478 0.00 0.00 0.00 4.40
1739 2318 4.336713 GGAAGTTGAGAAAGAGTTGCACTT 59.663 41.667 0.00 0.00 0.00 3.16
1740 2319 5.163612 GGAAGTTGAGAAAGAGTTGCACTTT 60.164 40.000 0.73 0.73 39.76 2.66
1741 2320 5.904362 AGTTGAGAAAGAGTTGCACTTTT 57.096 34.783 2.67 0.00 37.64 2.27
1742 2321 6.272822 AGTTGAGAAAGAGTTGCACTTTTT 57.727 33.333 2.67 3.99 35.55 1.94
1764 2343 7.490657 TTTTATAAGGTGAGCTCTTCTACCA 57.509 36.000 19.88 4.08 35.66 3.25
1765 2344 6.466885 TTATAAGGTGAGCTCTTCTACCAC 57.533 41.667 19.88 7.23 35.66 4.16
1766 2345 2.614134 AGGTGAGCTCTTCTACCACT 57.386 50.000 19.88 1.18 35.66 4.00
1767 2346 2.896039 AGGTGAGCTCTTCTACCACTT 58.104 47.619 19.88 1.52 35.66 3.16
1768 2347 2.564947 AGGTGAGCTCTTCTACCACTTG 59.435 50.000 19.88 0.00 35.66 3.16
1769 2348 2.300437 GGTGAGCTCTTCTACCACTTGT 59.700 50.000 16.19 0.00 33.42 3.16
1770 2349 3.510360 GGTGAGCTCTTCTACCACTTGTA 59.490 47.826 16.19 0.00 33.42 2.41
1771 2350 4.160626 GGTGAGCTCTTCTACCACTTGTAT 59.839 45.833 16.19 0.00 33.42 2.29
1772 2351 5.105752 GTGAGCTCTTCTACCACTTGTATG 58.894 45.833 16.19 0.00 0.00 2.39
1773 2352 5.016831 TGAGCTCTTCTACCACTTGTATGA 58.983 41.667 16.19 0.00 0.00 2.15
1774 2353 5.126222 TGAGCTCTTCTACCACTTGTATGAG 59.874 44.000 16.19 0.00 0.00 2.90
1775 2354 4.116238 GCTCTTCTACCACTTGTATGAGC 58.884 47.826 0.00 0.00 38.61 4.26
1776 2355 4.382040 GCTCTTCTACCACTTGTATGAGCA 60.382 45.833 0.00 0.00 41.54 4.26
1777 2356 5.683509 GCTCTTCTACCACTTGTATGAGCAT 60.684 44.000 0.00 0.00 41.54 3.79
1778 2357 5.664457 TCTTCTACCACTTGTATGAGCATG 58.336 41.667 0.00 0.00 0.00 4.06
1779 2358 5.422012 TCTTCTACCACTTGTATGAGCATGA 59.578 40.000 0.00 0.00 0.00 3.07
1780 2359 5.268118 TCTACCACTTGTATGAGCATGAG 57.732 43.478 0.00 0.00 0.00 2.90
1781 2360 4.956075 TCTACCACTTGTATGAGCATGAGA 59.044 41.667 0.00 0.00 0.00 3.27
1782 2361 4.558226 ACCACTTGTATGAGCATGAGAA 57.442 40.909 0.00 0.00 0.00 2.87
1783 2362 4.511527 ACCACTTGTATGAGCATGAGAAG 58.488 43.478 0.00 0.00 0.00 2.85
1784 2363 4.223700 ACCACTTGTATGAGCATGAGAAGA 59.776 41.667 0.00 0.00 0.00 2.87
1785 2364 4.809958 CCACTTGTATGAGCATGAGAAGAG 59.190 45.833 0.00 0.00 0.00 2.85
1786 2365 5.394993 CCACTTGTATGAGCATGAGAAGAGA 60.395 44.000 0.00 0.00 0.00 3.10
1787 2366 6.104665 CACTTGTATGAGCATGAGAAGAGAA 58.895 40.000 0.00 0.00 0.00 2.87
1788 2367 6.256104 CACTTGTATGAGCATGAGAAGAGAAG 59.744 42.308 0.00 0.00 0.00 2.85
1789 2368 6.154192 ACTTGTATGAGCATGAGAAGAGAAGA 59.846 38.462 0.00 0.00 0.00 2.87
1790 2369 5.900425 TGTATGAGCATGAGAAGAGAAGAC 58.100 41.667 0.00 0.00 0.00 3.01
1791 2370 3.883830 TGAGCATGAGAAGAGAAGACC 57.116 47.619 0.00 0.00 0.00 3.85
1792 2371 3.439154 TGAGCATGAGAAGAGAAGACCT 58.561 45.455 0.00 0.00 0.00 3.85
1793 2372 4.604156 TGAGCATGAGAAGAGAAGACCTA 58.396 43.478 0.00 0.00 0.00 3.08
1794 2373 4.400884 TGAGCATGAGAAGAGAAGACCTAC 59.599 45.833 0.00 0.00 0.00 3.18
1795 2374 4.348486 AGCATGAGAAGAGAAGACCTACA 58.652 43.478 0.00 0.00 0.00 2.74
1796 2375 4.159506 AGCATGAGAAGAGAAGACCTACAC 59.840 45.833 0.00 0.00 0.00 2.90
1797 2376 4.667262 CATGAGAAGAGAAGACCTACACG 58.333 47.826 0.00 0.00 0.00 4.49
1798 2377 3.752665 TGAGAAGAGAAGACCTACACGT 58.247 45.455 0.00 0.00 0.00 4.49
1799 2378 3.502595 TGAGAAGAGAAGACCTACACGTG 59.497 47.826 15.48 15.48 0.00 4.49
1800 2379 2.229302 AGAAGAGAAGACCTACACGTGC 59.771 50.000 17.22 0.00 0.00 5.34
1801 2380 0.522180 AGAGAAGACCTACACGTGCG 59.478 55.000 17.22 6.99 0.00 5.34
1802 2381 1.071567 GAGAAGACCTACACGTGCGC 61.072 60.000 17.22 0.00 0.00 6.09
1803 2382 1.080705 GAAGACCTACACGTGCGCT 60.081 57.895 17.22 2.86 0.00 5.92
1804 2383 1.071567 GAAGACCTACACGTGCGCTC 61.072 60.000 17.22 3.51 0.00 5.03
1805 2384 2.488087 AAGACCTACACGTGCGCTCC 62.488 60.000 17.22 2.44 0.00 4.70
1806 2385 2.989824 ACCTACACGTGCGCTCCT 60.990 61.111 17.22 0.00 0.00 3.69
1807 2386 2.202623 CCTACACGTGCGCTCCTC 60.203 66.667 17.22 0.00 0.00 3.71
1808 2387 2.202623 CTACACGTGCGCTCCTCC 60.203 66.667 17.22 0.00 0.00 4.30
1809 2388 2.675423 TACACGTGCGCTCCTCCT 60.675 61.111 17.22 0.00 0.00 3.69
1810 2389 2.600122 CTACACGTGCGCTCCTCCTC 62.600 65.000 17.22 0.00 0.00 3.71
1811 2390 4.803426 CACGTGCGCTCCTCCTCC 62.803 72.222 9.73 0.00 0.00 4.30
1813 2392 4.200283 CGTGCGCTCCTCCTCCTC 62.200 72.222 9.73 0.00 0.00 3.71
1814 2393 4.200283 GTGCGCTCCTCCTCCTCG 62.200 72.222 9.73 0.00 0.00 4.63
1831 2410 4.292178 GCGGAGAGGGGCGATCAG 62.292 72.222 0.00 0.00 0.00 2.90
1832 2411 3.610669 CGGAGAGGGGCGATCAGG 61.611 72.222 0.00 0.00 0.00 3.86
1833 2412 2.444895 GGAGAGGGGCGATCAGGT 60.445 66.667 0.00 0.00 0.00 4.00
1834 2413 2.066999 GGAGAGGGGCGATCAGGTT 61.067 63.158 0.00 0.00 0.00 3.50
1835 2414 1.627297 GGAGAGGGGCGATCAGGTTT 61.627 60.000 0.00 0.00 0.00 3.27
1836 2415 0.253327 GAGAGGGGCGATCAGGTTTT 59.747 55.000 0.00 0.00 0.00 2.43
1837 2416 0.698818 AGAGGGGCGATCAGGTTTTT 59.301 50.000 0.00 0.00 0.00 1.94
1838 2417 0.811281 GAGGGGCGATCAGGTTTTTG 59.189 55.000 0.00 0.00 0.00 2.44
1839 2418 0.611896 AGGGGCGATCAGGTTTTTGG 60.612 55.000 0.00 0.00 0.00 3.28
1840 2419 1.604147 GGGGCGATCAGGTTTTTGGG 61.604 60.000 0.00 0.00 0.00 4.12
1841 2420 1.604147 GGGCGATCAGGTTTTTGGGG 61.604 60.000 0.00 0.00 0.00 4.96
1842 2421 0.610785 GGCGATCAGGTTTTTGGGGA 60.611 55.000 0.00 0.00 0.00 4.81
1843 2422 0.811281 GCGATCAGGTTTTTGGGGAG 59.189 55.000 0.00 0.00 0.00 4.30
1844 2423 0.811281 CGATCAGGTTTTTGGGGAGC 59.189 55.000 0.00 0.00 0.00 4.70
1845 2424 0.811281 GATCAGGTTTTTGGGGAGCG 59.189 55.000 0.00 0.00 0.00 5.03
1846 2425 1.250840 ATCAGGTTTTTGGGGAGCGC 61.251 55.000 0.00 0.00 0.00 5.92
1847 2426 2.197324 AGGTTTTTGGGGAGCGCA 59.803 55.556 11.47 0.00 0.00 6.09
1848 2427 2.200337 AGGTTTTTGGGGAGCGCAC 61.200 57.895 11.47 1.97 0.00 5.34
1849 2428 2.200337 GGTTTTTGGGGAGCGCACT 61.200 57.895 11.47 0.00 0.00 4.40
1850 2429 1.285950 GTTTTTGGGGAGCGCACTC 59.714 57.895 11.47 1.84 42.66 3.51
1851 2430 2.258013 TTTTTGGGGAGCGCACTCG 61.258 57.895 11.47 0.00 44.48 4.18
1872 2451 4.724602 GACTGCTGGCAGCGACGA 62.725 66.667 32.12 15.55 46.26 4.20
1874 2453 4.731612 CTGCTGGCAGCGACGACT 62.732 66.667 32.12 0.00 46.26 4.18
1875 2454 4.299547 TGCTGGCAGCGACGACTT 62.300 61.111 32.12 0.00 46.26 3.01
1876 2455 3.482783 GCTGGCAGCGACGACTTC 61.483 66.667 25.47 0.00 0.00 3.01
1892 2471 2.941333 TCGCGAACGACGACTTCT 59.059 55.556 6.20 0.00 45.12 2.85
1893 2472 1.280746 TCGCGAACGACGACTTCTT 59.719 52.632 6.20 0.00 45.12 2.52
1894 2473 0.723790 TCGCGAACGACGACTTCTTC 60.724 55.000 6.20 0.00 45.12 2.87
1895 2474 1.662845 CGCGAACGACGACTTCTTCC 61.663 60.000 0.00 0.00 45.77 3.46
1896 2475 1.342796 GCGAACGACGACTTCTTCCC 61.343 60.000 0.00 0.00 45.77 3.97
1897 2476 0.731855 CGAACGACGACTTCTTCCCC 60.732 60.000 0.00 0.00 45.77 4.81
1898 2477 0.731855 GAACGACGACTTCTTCCCCG 60.732 60.000 0.00 0.00 0.00 5.73
1899 2478 1.174712 AACGACGACTTCTTCCCCGA 61.175 55.000 0.00 0.00 0.00 5.14
1900 2479 0.964358 ACGACGACTTCTTCCCCGAT 60.964 55.000 0.00 0.00 0.00 4.18
1901 2480 0.248539 CGACGACTTCTTCCCCGATC 60.249 60.000 0.00 0.00 0.00 3.69
1902 2481 1.104630 GACGACTTCTTCCCCGATCT 58.895 55.000 0.00 0.00 0.00 2.75
1903 2482 1.065851 GACGACTTCTTCCCCGATCTC 59.934 57.143 0.00 0.00 0.00 2.75
1904 2483 0.029567 CGACTTCTTCCCCGATCTCG 59.970 60.000 0.00 0.00 39.44 4.04
1914 2493 2.490217 CGATCTCGGCAACCTCGT 59.510 61.111 0.00 0.00 35.37 4.18
1915 2494 1.586564 CGATCTCGGCAACCTCGTC 60.587 63.158 0.00 0.00 35.37 4.20
1916 2495 1.227002 GATCTCGGCAACCTCGTCC 60.227 63.158 0.00 0.00 0.00 4.79
1917 2496 1.668101 GATCTCGGCAACCTCGTCCT 61.668 60.000 0.00 0.00 0.00 3.85
1918 2497 1.668101 ATCTCGGCAACCTCGTCCTC 61.668 60.000 0.00 0.00 0.00 3.71
1919 2498 3.685214 CTCGGCAACCTCGTCCTCG 62.685 68.421 0.00 0.00 38.55 4.63
1920 2499 3.744719 CGGCAACCTCGTCCTCGA 61.745 66.667 0.00 0.00 44.12 4.04
1921 2500 2.126031 GGCAACCTCGTCCTCGAC 60.126 66.667 0.00 0.00 41.35 4.20
1930 2509 3.285371 GTCCTCGACGACATGGGT 58.715 61.111 9.35 0.00 32.74 4.51
1931 2510 1.153823 GTCCTCGACGACATGGGTG 60.154 63.158 9.35 0.00 32.74 4.61
1932 2511 1.303806 TCCTCGACGACATGGGTGA 60.304 57.895 0.00 0.00 0.00 4.02
1933 2512 1.153823 CCTCGACGACATGGGTGAC 60.154 63.158 0.00 0.00 0.00 3.67
1934 2513 1.584495 CTCGACGACATGGGTGACA 59.416 57.895 0.00 0.00 0.00 3.58
1935 2514 0.038618 CTCGACGACATGGGTGACAA 60.039 55.000 0.00 0.00 0.00 3.18
1936 2515 0.606096 TCGACGACATGGGTGACAAT 59.394 50.000 0.00 0.00 0.00 2.71
1937 2516 0.721154 CGACGACATGGGTGACAATG 59.279 55.000 0.00 0.00 0.00 2.82
1938 2517 1.808411 GACGACATGGGTGACAATGT 58.192 50.000 3.20 3.20 0.00 2.71
1939 2518 1.732259 GACGACATGGGTGACAATGTC 59.268 52.381 16.28 16.28 39.81 3.06
1940 2519 1.071542 ACGACATGGGTGACAATGTCA 59.928 47.619 22.30 12.63 42.40 3.58
1941 2520 2.150390 CGACATGGGTGACAATGTCAA 58.850 47.619 18.48 2.92 44.49 3.18
1942 2521 2.749076 CGACATGGGTGACAATGTCAAT 59.251 45.455 18.48 5.42 44.49 2.57
1943 2522 3.426560 CGACATGGGTGACAATGTCAATG 60.427 47.826 18.48 19.00 44.49 2.82
1944 2523 2.231964 ACATGGGTGACAATGTCAATGC 59.768 45.455 18.48 5.79 44.49 3.56
1945 2524 1.255882 TGGGTGACAATGTCAATGCC 58.744 50.000 18.48 14.59 44.49 4.40
1946 2525 0.171007 GGGTGACAATGTCAATGCCG 59.829 55.000 18.48 0.00 44.49 5.69
1947 2526 0.171007 GGTGACAATGTCAATGCCGG 59.829 55.000 18.48 0.00 44.49 6.13
1948 2527 0.456653 GTGACAATGTCAATGCCGGC 60.457 55.000 22.73 22.73 44.49 6.13
1949 2528 1.226379 GACAATGTCAATGCCGGCG 60.226 57.895 23.90 7.87 32.09 6.46
1950 2529 2.102749 CAATGTCAATGCCGGCGG 59.897 61.111 24.35 24.35 0.00 6.13
1951 2530 2.361104 AATGTCAATGCCGGCGGT 60.361 55.556 28.82 10.60 0.00 5.68
1952 2531 2.699768 AATGTCAATGCCGGCGGTG 61.700 57.895 28.82 21.81 0.00 4.94
1953 2532 3.918253 ATGTCAATGCCGGCGGTGT 62.918 57.895 28.82 13.80 0.00 4.16
1954 2533 3.361977 GTCAATGCCGGCGGTGTT 61.362 61.111 28.82 19.12 0.00 3.32
1955 2534 3.361158 TCAATGCCGGCGGTGTTG 61.361 61.111 28.82 28.23 0.00 3.33
1967 2546 4.030452 GTGTTGCTCCCGCTGCAC 62.030 66.667 0.00 0.00 40.40 4.57
1972 2551 4.530857 GCTCCCGCTGCACCGTAT 62.531 66.667 0.00 0.00 0.00 3.06
1973 2552 2.586079 CTCCCGCTGCACCGTATG 60.586 66.667 0.00 0.00 0.00 2.39
1974 2553 3.371097 CTCCCGCTGCACCGTATGT 62.371 63.158 0.00 0.00 0.00 2.29
1988 2567 5.470047 ACCGTATGTGATTCTATCCTTCC 57.530 43.478 0.00 0.00 0.00 3.46
1989 2568 5.148502 ACCGTATGTGATTCTATCCTTCCT 58.851 41.667 0.00 0.00 0.00 3.36
1990 2569 5.011125 ACCGTATGTGATTCTATCCTTCCTG 59.989 44.000 0.00 0.00 0.00 3.86
1991 2570 5.011125 CCGTATGTGATTCTATCCTTCCTGT 59.989 44.000 0.00 0.00 0.00 4.00
1999 2578 5.776173 TTCTATCCTTCCTGTTCGAGATC 57.224 43.478 0.00 0.00 0.00 2.75
2000 2579 3.815962 TCTATCCTTCCTGTTCGAGATCG 59.184 47.826 0.00 0.00 41.45 3.69
2006 2585 2.014857 TCCTGTTCGAGATCGTGGTAG 58.985 52.381 1.70 0.00 40.80 3.18
2009 2588 3.066900 CCTGTTCGAGATCGTGGTAGAAT 59.933 47.826 1.70 0.00 40.80 2.40
2010 2589 4.440250 CCTGTTCGAGATCGTGGTAGAATT 60.440 45.833 1.70 0.00 40.80 2.17
2011 2590 4.669318 TGTTCGAGATCGTGGTAGAATTC 58.331 43.478 0.00 0.00 40.80 2.17
2013 2592 5.163550 TGTTCGAGATCGTGGTAGAATTCAT 60.164 40.000 8.44 0.00 40.80 2.57
2016 2595 5.043903 CGAGATCGTGGTAGAATTCATGTT 58.956 41.667 8.44 0.00 34.11 2.71
2017 2596 5.520288 CGAGATCGTGGTAGAATTCATGTTT 59.480 40.000 8.44 0.00 34.11 2.83
2018 2597 6.291849 CGAGATCGTGGTAGAATTCATGTTTC 60.292 42.308 8.44 0.00 34.11 2.78
2019 2598 6.644347 AGATCGTGGTAGAATTCATGTTTCT 58.356 36.000 8.44 14.90 37.25 2.52
2020 2599 7.782049 AGATCGTGGTAGAATTCATGTTTCTA 58.218 34.615 8.44 13.40 35.19 2.10
2021 2600 7.923344 AGATCGTGGTAGAATTCATGTTTCTAG 59.077 37.037 16.18 8.71 36.59 2.43
2022 2601 6.931838 TCGTGGTAGAATTCATGTTTCTAGT 58.068 36.000 16.18 1.18 36.59 2.57
2023 2602 8.058667 TCGTGGTAGAATTCATGTTTCTAGTA 57.941 34.615 16.18 9.12 36.59 1.82
2024 2603 8.692710 TCGTGGTAGAATTCATGTTTCTAGTAT 58.307 33.333 16.18 0.65 36.59 2.12
2025 2604 8.755941 CGTGGTAGAATTCATGTTTCTAGTATG 58.244 37.037 16.18 11.62 36.59 2.39
2026 2605 9.601217 GTGGTAGAATTCATGTTTCTAGTATGT 57.399 33.333 16.18 0.00 36.59 2.29
2027 2606 9.599866 TGGTAGAATTCATGTTTCTAGTATGTG 57.400 33.333 16.18 0.00 36.59 3.21
2028 2607 8.552034 GGTAGAATTCATGTTTCTAGTATGTGC 58.448 37.037 16.18 7.25 36.59 4.57
2029 2608 7.559590 AGAATTCATGTTTCTAGTATGTGCC 57.440 36.000 8.44 0.00 31.75 5.01
2030 2609 6.543831 AGAATTCATGTTTCTAGTATGTGCCC 59.456 38.462 8.44 0.00 31.75 5.36
2031 2610 5.435686 TTCATGTTTCTAGTATGTGCCCT 57.564 39.130 0.00 0.00 0.00 5.19
2032 2611 6.553953 TTCATGTTTCTAGTATGTGCCCTA 57.446 37.500 0.00 0.00 0.00 3.53
2033 2612 6.161855 TCATGTTTCTAGTATGTGCCCTAG 57.838 41.667 0.00 0.00 33.46 3.02
2034 2613 5.897250 TCATGTTTCTAGTATGTGCCCTAGA 59.103 40.000 0.00 0.00 38.26 2.43
2035 2614 6.554982 TCATGTTTCTAGTATGTGCCCTAGAT 59.445 38.462 0.00 0.00 39.40 1.98
2036 2615 6.161855 TGTTTCTAGTATGTGCCCTAGATG 57.838 41.667 0.00 0.00 39.40 2.90
2037 2616 5.661312 TGTTTCTAGTATGTGCCCTAGATGT 59.339 40.000 0.00 0.00 39.40 3.06
2038 2617 6.156256 TGTTTCTAGTATGTGCCCTAGATGTT 59.844 38.462 0.00 0.00 39.40 2.71
2039 2618 7.343574 TGTTTCTAGTATGTGCCCTAGATGTTA 59.656 37.037 0.00 0.00 39.40 2.41
2040 2619 8.368668 GTTTCTAGTATGTGCCCTAGATGTTAT 58.631 37.037 0.00 0.00 39.40 1.89
2041 2620 7.704578 TCTAGTATGTGCCCTAGATGTTATC 57.295 40.000 0.00 0.00 35.82 1.75
2042 2621 7.471041 TCTAGTATGTGCCCTAGATGTTATCT 58.529 38.462 0.00 0.00 43.33 1.98
2043 2622 6.352016 AGTATGTGCCCTAGATGTTATCTG 57.648 41.667 1.71 0.00 40.51 2.90
2044 2623 5.841237 AGTATGTGCCCTAGATGTTATCTGT 59.159 40.000 1.71 0.00 40.51 3.41
2045 2624 5.636903 ATGTGCCCTAGATGTTATCTGTT 57.363 39.130 1.71 0.00 40.51 3.16
2046 2625 5.023533 TGTGCCCTAGATGTTATCTGTTC 57.976 43.478 1.71 0.00 40.51 3.18
2047 2626 4.469586 TGTGCCCTAGATGTTATCTGTTCA 59.530 41.667 1.71 0.00 40.51 3.18
2048 2627 5.130975 TGTGCCCTAGATGTTATCTGTTCAT 59.869 40.000 1.71 0.00 40.51 2.57
2049 2628 5.698545 GTGCCCTAGATGTTATCTGTTCATC 59.301 44.000 1.71 0.00 40.51 2.92
2050 2629 5.604231 TGCCCTAGATGTTATCTGTTCATCT 59.396 40.000 10.84 10.84 46.33 2.90
2051 2630 5.931146 GCCCTAGATGTTATCTGTTCATCTG 59.069 44.000 14.51 6.88 44.95 2.90
2052 2631 5.931146 CCCTAGATGTTATCTGTTCATCTGC 59.069 44.000 14.51 0.00 44.95 4.26
2053 2632 6.239543 CCCTAGATGTTATCTGTTCATCTGCT 60.240 42.308 14.51 0.00 44.95 4.24
2054 2633 7.039434 CCCTAGATGTTATCTGTTCATCTGCTA 60.039 40.741 14.51 0.00 44.95 3.49
2055 2634 8.530311 CCTAGATGTTATCTGTTCATCTGCTAT 58.470 37.037 14.51 0.00 44.95 2.97
2056 2635 9.356433 CTAGATGTTATCTGTTCATCTGCTATG 57.644 37.037 14.51 0.00 44.95 2.23
2057 2636 6.649973 AGATGTTATCTGTTCATCTGCTATGC 59.350 38.462 6.17 0.00 44.08 3.14
2058 2637 5.922053 TGTTATCTGTTCATCTGCTATGCT 58.078 37.500 0.00 0.00 0.00 3.79
2059 2638 7.054491 TGTTATCTGTTCATCTGCTATGCTA 57.946 36.000 0.00 0.00 0.00 3.49
2060 2639 7.150640 TGTTATCTGTTCATCTGCTATGCTAG 58.849 38.462 0.00 0.00 0.00 3.42
2061 2640 5.804944 ATCTGTTCATCTGCTATGCTAGT 57.195 39.130 0.00 0.00 0.00 2.57
2062 2641 5.604758 TCTGTTCATCTGCTATGCTAGTT 57.395 39.130 0.00 0.00 0.00 2.24
2063 2642 5.595885 TCTGTTCATCTGCTATGCTAGTTC 58.404 41.667 0.00 0.00 0.00 3.01
2064 2643 5.127682 TCTGTTCATCTGCTATGCTAGTTCA 59.872 40.000 0.00 0.00 0.00 3.18
2065 2644 5.111989 TGTTCATCTGCTATGCTAGTTCAC 58.888 41.667 0.00 0.00 0.00 3.18
2066 2645 5.111989 GTTCATCTGCTATGCTAGTTCACA 58.888 41.667 0.00 0.00 0.00 3.58
2067 2646 5.541953 TCATCTGCTATGCTAGTTCACAT 57.458 39.130 0.00 0.00 0.00 3.21
2068 2647 5.295152 TCATCTGCTATGCTAGTTCACATG 58.705 41.667 0.00 0.00 0.00 3.21
2069 2648 5.069516 TCATCTGCTATGCTAGTTCACATGA 59.930 40.000 0.00 0.00 0.00 3.07
2070 2649 5.541953 TCTGCTATGCTAGTTCACATGAT 57.458 39.130 0.00 0.00 0.00 2.45
2071 2650 5.922053 TCTGCTATGCTAGTTCACATGATT 58.078 37.500 0.00 0.00 0.00 2.57
2072 2651 7.054491 TCTGCTATGCTAGTTCACATGATTA 57.946 36.000 0.00 0.00 0.00 1.75
2073 2652 7.150640 TCTGCTATGCTAGTTCACATGATTAG 58.849 38.462 0.00 0.00 0.00 1.73
2074 2653 6.820335 TGCTATGCTAGTTCACATGATTAGT 58.180 36.000 0.00 0.00 0.00 2.24
2075 2654 7.275183 TGCTATGCTAGTTCACATGATTAGTT 58.725 34.615 0.00 0.00 0.00 2.24
2076 2655 7.770433 TGCTATGCTAGTTCACATGATTAGTTT 59.230 33.333 0.00 0.00 0.00 2.66
2077 2656 9.261180 GCTATGCTAGTTCACATGATTAGTTTA 57.739 33.333 0.00 0.00 0.00 2.01
2081 2660 9.890629 TGCTAGTTCACATGATTAGTTTAATCT 57.109 29.630 0.00 0.00 43.79 2.40
2085 2664 9.950496 AGTTCACATGATTAGTTTAATCTCTGT 57.050 29.630 0.00 9.58 43.79 3.41
2088 2667 9.725019 TCACATGATTAGTTTAATCTCTGTTGT 57.275 29.630 0.00 4.41 43.79 3.32
2098 2677 8.993121 AGTTTAATCTCTGTTGTTGTAGTCATG 58.007 33.333 0.00 0.00 0.00 3.07
2099 2678 8.988934 GTTTAATCTCTGTTGTTGTAGTCATGA 58.011 33.333 0.00 0.00 0.00 3.07
2100 2679 9.725019 TTTAATCTCTGTTGTTGTAGTCATGAT 57.275 29.630 0.00 0.00 0.00 2.45
2101 2680 9.725019 TTAATCTCTGTTGTTGTAGTCATGATT 57.275 29.630 0.00 0.00 0.00 2.57
2102 2681 8.627208 AATCTCTGTTGTTGTAGTCATGATTT 57.373 30.769 0.00 0.00 0.00 2.17
2103 2682 9.725019 AATCTCTGTTGTTGTAGTCATGATTTA 57.275 29.630 0.00 0.00 0.00 1.40
2104 2683 9.896645 ATCTCTGTTGTTGTAGTCATGATTTAT 57.103 29.630 0.00 0.00 0.00 1.40
2105 2684 9.371136 TCTCTGTTGTTGTAGTCATGATTTATC 57.629 33.333 0.00 0.00 0.00 1.75
2106 2685 9.376075 CTCTGTTGTTGTAGTCATGATTTATCT 57.624 33.333 0.00 0.00 0.00 1.98
2107 2686 9.725019 TCTGTTGTTGTAGTCATGATTTATCTT 57.275 29.630 0.00 0.00 0.00 2.40
2108 2687 9.979270 CTGTTGTTGTAGTCATGATTTATCTTC 57.021 33.333 0.00 0.00 0.00 2.87
2109 2688 9.725019 TGTTGTTGTAGTCATGATTTATCTTCT 57.275 29.630 0.00 0.00 0.00 2.85
2110 2689 9.979270 GTTGTTGTAGTCATGATTTATCTTCTG 57.021 33.333 0.00 0.00 0.00 3.02
2111 2690 9.725019 TTGTTGTAGTCATGATTTATCTTCTGT 57.275 29.630 0.00 0.00 0.00 3.41
2112 2691 9.725019 TGTTGTAGTCATGATTTATCTTCTGTT 57.275 29.630 0.00 0.00 0.00 3.16
2119 2698 9.869844 GTCATGATTTATCTTCTGTTTATTCGG 57.130 33.333 0.00 0.00 0.00 4.30
2120 2699 9.830975 TCATGATTTATCTTCTGTTTATTCGGA 57.169 29.630 0.00 0.00 0.00 4.55
2130 2709 9.031360 TCTTCTGTTTATTCGGATTAAATCTCG 57.969 33.333 7.97 0.00 0.00 4.04
2131 2710 8.712285 TTCTGTTTATTCGGATTAAATCTCGT 57.288 30.769 7.97 0.00 0.00 4.18
2132 2711 9.806203 TTCTGTTTATTCGGATTAAATCTCGTA 57.194 29.630 7.97 0.00 0.00 3.43
2133 2712 9.459640 TCTGTTTATTCGGATTAAATCTCGTAG 57.540 33.333 7.97 2.99 0.00 3.51
2134 2713 9.245962 CTGTTTATTCGGATTAAATCTCGTAGT 57.754 33.333 7.97 0.00 0.00 2.73
2141 2720 8.068893 TCGGATTAAATCTCGTAGTAATTTGC 57.931 34.615 0.00 0.00 0.00 3.68
2142 2721 7.924412 TCGGATTAAATCTCGTAGTAATTTGCT 59.076 33.333 0.00 0.00 0.00 3.91
2143 2722 8.215132 CGGATTAAATCTCGTAGTAATTTGCTC 58.785 37.037 0.00 0.00 0.00 4.26
2144 2723 9.042008 GGATTAAATCTCGTAGTAATTTGCTCA 57.958 33.333 0.00 0.00 0.00 4.26
2151 2730 8.589335 TCTCGTAGTAATTTGCTCATATTTCC 57.411 34.615 0.00 0.00 0.00 3.13
2152 2731 8.201464 TCTCGTAGTAATTTGCTCATATTTCCA 58.799 33.333 0.00 0.00 0.00 3.53
2153 2732 8.725405 TCGTAGTAATTTGCTCATATTTCCAA 57.275 30.769 0.00 0.00 0.00 3.53
2154 2733 8.609176 TCGTAGTAATTTGCTCATATTTCCAAC 58.391 33.333 0.00 0.00 0.00 3.77
2155 2734 8.394877 CGTAGTAATTTGCTCATATTTCCAACA 58.605 33.333 0.00 0.00 0.00 3.33
2158 2737 8.970020 AGTAATTTGCTCATATTTCCAACATGA 58.030 29.630 0.00 0.00 0.00 3.07
2159 2738 9.585099 GTAATTTGCTCATATTTCCAACATGAA 57.415 29.630 0.00 0.00 0.00 2.57
2160 2739 8.483307 AATTTGCTCATATTTCCAACATGAAC 57.517 30.769 0.00 0.00 0.00 3.18
2161 2740 6.839124 TTGCTCATATTTCCAACATGAACT 57.161 33.333 0.00 0.00 0.00 3.01
2162 2741 6.198650 TGCTCATATTTCCAACATGAACTG 57.801 37.500 0.00 0.00 0.00 3.16
2163 2742 5.711506 TGCTCATATTTCCAACATGAACTGT 59.288 36.000 0.00 0.00 40.84 3.55
2165 2744 6.749118 GCTCATATTTCCAACATGAACTGTTC 59.251 38.462 13.49 13.49 44.99 3.18
2166 2745 7.575532 GCTCATATTTCCAACATGAACTGTTCA 60.576 37.037 23.94 23.94 44.99 3.18
2167 2746 8.175925 TCATATTTCCAACATGAACTGTTCAA 57.824 30.769 25.26 10.59 44.99 2.69
2168 2747 8.637099 TCATATTTCCAACATGAACTGTTCAAA 58.363 29.630 25.26 14.18 44.99 2.69
2169 2748 9.426837 CATATTTCCAACATGAACTGTTCAAAT 57.573 29.630 25.26 19.19 44.99 2.32
2171 2750 7.536895 TTTCCAACATGAACTGTTCAAATTG 57.463 32.000 26.96 26.96 44.99 2.32
2172 2751 6.219417 TCCAACATGAACTGTTCAAATTGT 57.781 33.333 29.04 24.31 44.99 2.71
2173 2752 6.638610 TCCAACATGAACTGTTCAAATTGTT 58.361 32.000 29.04 26.97 44.99 2.83
2174 2753 6.534436 TCCAACATGAACTGTTCAAATTGTTG 59.466 34.615 34.62 34.62 44.99 3.33
2223 2802 7.994911 ACATAAGATATGTGGAATGAGCTTTCA 59.005 33.333 2.36 0.00 0.00 2.69
2341 2922 6.223120 AGCCTTTTTCAAATAATGCGTCTTT 58.777 32.000 0.00 0.00 0.00 2.52
2351 2932 9.944663 TCAAATAATGCGTCTTTATTGGTTATC 57.055 29.630 9.68 0.00 31.39 1.75
2352 2933 9.729023 CAAATAATGCGTCTTTATTGGTTATCA 57.271 29.630 9.68 0.00 31.39 2.15
2357 2938 6.954944 TGCGTCTTTATTGGTTATCAATAGC 58.045 36.000 0.00 0.00 45.72 2.97
2358 2939 6.017440 TGCGTCTTTATTGGTTATCAATAGCC 60.017 38.462 0.00 0.00 45.72 3.93
2359 2940 6.204882 GCGTCTTTATTGGTTATCAATAGCCT 59.795 38.462 0.00 0.00 45.72 4.58
2360 2941 7.255139 GCGTCTTTATTGGTTATCAATAGCCTT 60.255 37.037 0.00 0.00 45.72 4.35
2361 2942 8.621286 CGTCTTTATTGGTTATCAATAGCCTTT 58.379 33.333 0.00 0.00 45.72 3.11
2376 2957 9.638239 TCAATAGCCTTTTTCAAATAATGTGTC 57.362 29.630 0.00 0.00 0.00 3.67
2377 2958 9.643693 CAATAGCCTTTTTCAAATAATGTGTCT 57.356 29.630 0.00 0.00 0.00 3.41
2390 2971 9.655769 CAAATAATGTGTCTTTATTGATCGAGG 57.344 33.333 0.00 0.00 31.39 4.63
2391 2972 8.964476 AATAATGTGTCTTTATTGATCGAGGT 57.036 30.769 0.00 0.00 30.16 3.85
2394 2975 8.786826 AATGTGTCTTTATTGATCGAGGTAAA 57.213 30.769 0.00 0.00 0.00 2.01
2395 2976 7.591006 TGTGTCTTTATTGATCGAGGTAAAC 57.409 36.000 0.00 0.00 0.00 2.01
2396 2977 6.309494 TGTGTCTTTATTGATCGAGGTAAACG 59.691 38.462 0.00 0.00 0.00 3.60
2397 2978 6.309737 GTGTCTTTATTGATCGAGGTAAACGT 59.690 38.462 0.00 0.00 0.00 3.99
2398 2979 6.869913 TGTCTTTATTGATCGAGGTAAACGTT 59.130 34.615 0.00 0.00 0.00 3.99
2399 2980 8.028354 TGTCTTTATTGATCGAGGTAAACGTTA 58.972 33.333 0.00 0.00 0.00 3.18
2400 2981 8.529911 GTCTTTATTGATCGAGGTAAACGTTAG 58.470 37.037 0.00 0.00 0.00 2.34
2401 2982 8.246180 TCTTTATTGATCGAGGTAAACGTTAGT 58.754 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 9.013229 TGTCTATCTTTTTCATACACTTTGCAT 57.987 29.630 0.00 0.00 0.00 3.96
83 84 8.389779 TGTCTATCTTTTTCATACACTTTGCA 57.610 30.769 0.00 0.00 0.00 4.08
84 85 9.495754 GATGTCTATCTTTTTCATACACTTTGC 57.504 33.333 0.00 0.00 0.00 3.68
90 91 9.942850 TGTTCTGATGTCTATCTTTTTCATACA 57.057 29.630 0.00 0.00 34.31 2.29
93 94 9.458727 ACATGTTCTGATGTCTATCTTTTTCAT 57.541 29.630 0.00 0.00 30.34 2.57
94 95 8.853077 ACATGTTCTGATGTCTATCTTTTTCA 57.147 30.769 0.00 0.00 30.34 2.69
96 97 8.887717 GCTACATGTTCTGATGTCTATCTTTTT 58.112 33.333 2.30 0.00 37.70 1.94
97 98 8.263640 AGCTACATGTTCTGATGTCTATCTTTT 58.736 33.333 2.30 0.00 37.70 2.27
98 99 7.710044 CAGCTACATGTTCTGATGTCTATCTTT 59.290 37.037 17.85 0.00 37.70 2.52
99 100 7.147759 ACAGCTACATGTTCTGATGTCTATCTT 60.148 37.037 25.27 5.20 37.70 2.40
100 101 6.323482 ACAGCTACATGTTCTGATGTCTATCT 59.677 38.462 25.27 5.74 37.70 1.98
101 102 6.511416 ACAGCTACATGTTCTGATGTCTATC 58.489 40.000 25.27 0.00 37.70 2.08
102 103 6.477053 ACAGCTACATGTTCTGATGTCTAT 57.523 37.500 25.27 6.82 37.70 1.98
103 104 5.921962 ACAGCTACATGTTCTGATGTCTA 57.078 39.130 25.27 0.00 37.70 2.59
104 105 4.815533 ACAGCTACATGTTCTGATGTCT 57.184 40.909 25.27 7.89 37.70 3.41
105 106 5.180117 ACAAACAGCTACATGTTCTGATGTC 59.820 40.000 25.27 1.60 42.49 3.06
106 107 5.065914 ACAAACAGCTACATGTTCTGATGT 58.934 37.500 25.27 23.51 42.49 3.06
107 108 5.618056 ACAAACAGCTACATGTTCTGATG 57.382 39.130 25.27 23.09 42.49 3.07
108 109 7.744087 TTAACAAACAGCTACATGTTCTGAT 57.256 32.000 25.27 15.82 42.49 2.90
109 110 7.561021 TTTAACAAACAGCTACATGTTCTGA 57.439 32.000 25.27 7.35 42.49 3.27
110 111 8.627487 TTTTTAACAAACAGCTACATGTTCTG 57.373 30.769 19.91 19.91 42.49 3.02
111 112 8.682710 TCTTTTTAACAAACAGCTACATGTTCT 58.317 29.630 2.30 0.00 42.49 3.01
112 113 8.743099 GTCTTTTTAACAAACAGCTACATGTTC 58.257 33.333 2.30 0.00 42.49 3.18
113 114 8.466798 AGTCTTTTTAACAAACAGCTACATGTT 58.533 29.630 2.30 12.87 45.18 2.71
114 115 7.996385 AGTCTTTTTAACAAACAGCTACATGT 58.004 30.769 2.69 2.69 33.96 3.21
115 116 7.591426 GGAGTCTTTTTAACAAACAGCTACATG 59.409 37.037 0.00 0.00 0.00 3.21
116 117 7.502561 AGGAGTCTTTTTAACAAACAGCTACAT 59.497 33.333 0.00 0.00 0.00 2.29
117 118 6.826741 AGGAGTCTTTTTAACAAACAGCTACA 59.173 34.615 0.00 0.00 0.00 2.74
118 119 7.132863 CAGGAGTCTTTTTAACAAACAGCTAC 58.867 38.462 0.00 0.00 0.00 3.58
182 183 4.212214 TCAGACGTCATCTCGAGATATGTG 59.788 45.833 26.87 19.20 34.41 3.21
203 204 2.323599 CTCCACTCCTATCTGCCATCA 58.676 52.381 0.00 0.00 0.00 3.07
208 209 2.295909 CTGTAGCTCCACTCCTATCTGC 59.704 54.545 0.00 0.00 0.00 4.26
228 229 9.936329 AATAATATTTAGGACAACCATGGAACT 57.064 29.630 21.47 10.79 38.94 3.01
257 258 0.108329 AACCGTTCAGATACTGCCGG 60.108 55.000 19.67 19.67 44.81 6.13
259 260 2.418976 GGAAAACCGTTCAGATACTGCC 59.581 50.000 0.00 0.00 0.00 4.85
267 268 3.681593 TGGGATAAGGAAAACCGTTCAG 58.318 45.455 0.00 0.00 0.00 3.02
273 274 4.856509 ACTTAGCTGGGATAAGGAAAACC 58.143 43.478 0.00 0.00 35.06 3.27
338 377 1.238439 CAACGGCAAGACCATCAAGT 58.762 50.000 0.00 0.00 39.03 3.16
339 378 1.069022 CACAACGGCAAGACCATCAAG 60.069 52.381 0.00 0.00 39.03 3.02
340 379 0.950836 CACAACGGCAAGACCATCAA 59.049 50.000 0.00 0.00 39.03 2.57
341 380 1.514678 GCACAACGGCAAGACCATCA 61.515 55.000 0.00 0.00 39.03 3.07
342 381 1.210155 GCACAACGGCAAGACCATC 59.790 57.895 0.00 0.00 39.03 3.51
354 393 2.224257 ACATCCCCAAATTGTGCACAAC 60.224 45.455 33.29 0.00 38.86 3.32
369 408 2.949644 GTGGGTTTACATGCTACATCCC 59.050 50.000 0.00 0.00 34.77 3.85
372 411 2.026636 ACGGTGGGTTTACATGCTACAT 60.027 45.455 0.00 0.00 0.00 2.29
386 425 1.086696 CTAATGCACAGAACGGTGGG 58.913 55.000 7.13 0.00 39.19 4.61
453 492 2.030185 GGCGATCATAAGCCGAAGACTA 60.030 50.000 0.00 0.00 44.22 2.59
478 527 0.099259 CCGTCCTTGTATGCGACGTA 59.901 55.000 7.89 0.00 46.03 3.57
488 539 2.045926 GATGCCAGCCGTCCTTGT 60.046 61.111 0.00 0.00 0.00 3.16
490 541 2.270205 CAGATGCCAGCCGTCCTT 59.730 61.111 0.00 0.00 0.00 3.36
527 579 7.761409 TCCAAGCACTAATTTTGCATAACTAG 58.239 34.615 12.75 4.18 42.83 2.57
586 656 2.000429 AAGAATGGCTGCGAAATTGC 58.000 45.000 0.00 0.00 0.00 3.56
703 779 2.286772 GGCTTCAGGTACAACGTTTGTG 60.287 50.000 0.00 0.00 45.03 3.33
794 876 4.517285 TCTTAAGGTTGACATCTGATGGC 58.483 43.478 20.83 18.88 39.32 4.40
801 883 3.119101 TCGGCTCTCTTAAGGTTGACATC 60.119 47.826 1.85 0.00 0.00 3.06
803 885 2.231478 CTCGGCTCTCTTAAGGTTGACA 59.769 50.000 1.85 0.00 0.00 3.58
842 926 8.938883 ACTTTATATAGAAGAGAGCATGGGAAA 58.061 33.333 0.00 0.00 0.00 3.13
964 1066 2.409948 AGGAGAAGTAATGCAGGTGC 57.590 50.000 0.00 0.00 42.50 5.01
992 1097 2.176546 CGCTCGCCATTGTGGTTG 59.823 61.111 0.00 0.00 40.46 3.77
993 1098 3.737172 GCGCTCGCCATTGTGGTT 61.737 61.111 0.00 0.00 40.46 3.67
1039 1147 3.501911 AAGGGCACTGGCAGTGGT 61.502 61.111 39.74 10.94 46.01 4.16
1100 1208 0.036875 CAGGAAACGGCTCCTCCTTT 59.963 55.000 4.66 0.00 44.46 3.11
1361 1469 3.920231 ATCCATAGCTGCACTTCTTGA 57.080 42.857 1.02 0.00 0.00 3.02
1486 2059 3.409026 TTGCCACAACACCAAGTTTTT 57.591 38.095 0.00 0.00 38.74 1.94
1490 2063 1.774110 TCATTGCCACAACACCAAGT 58.226 45.000 0.00 0.00 0.00 3.16
1555 2133 7.989416 TGTTCTGATTTACGGGTAGAAAAAT 57.011 32.000 0.00 0.00 0.00 1.82
1601 2180 5.410924 CCAAAGGCCTACTAGCAAAATTTC 58.589 41.667 5.16 0.00 0.00 2.17
1607 2186 3.569873 GCCAAAGGCCTACTAGCAA 57.430 52.632 5.16 0.00 44.06 3.91
1624 2203 4.925646 CAGAATTTTAGTTGGGCTTTGAGC 59.074 41.667 0.00 0.00 41.46 4.26
1625 2204 6.331369 TCAGAATTTTAGTTGGGCTTTGAG 57.669 37.500 0.00 0.00 0.00 3.02
1626 2205 6.723298 TTCAGAATTTTAGTTGGGCTTTGA 57.277 33.333 0.00 0.00 0.00 2.69
1627 2206 7.967890 ATTTCAGAATTTTAGTTGGGCTTTG 57.032 32.000 0.00 0.00 0.00 2.77
1628 2207 8.432013 AGAATTTCAGAATTTTAGTTGGGCTTT 58.568 29.630 0.00 0.00 35.65 3.51
1629 2208 7.966812 AGAATTTCAGAATTTTAGTTGGGCTT 58.033 30.769 0.00 0.00 35.65 4.35
1630 2209 7.452813 AGAGAATTTCAGAATTTTAGTTGGGCT 59.547 33.333 0.00 0.00 35.65 5.19
1631 2210 7.606349 AGAGAATTTCAGAATTTTAGTTGGGC 58.394 34.615 0.00 0.00 35.65 5.36
1632 2211 9.415544 CAAGAGAATTTCAGAATTTTAGTTGGG 57.584 33.333 0.00 0.00 35.65 4.12
1633 2212 9.415544 CCAAGAGAATTTCAGAATTTTAGTTGG 57.584 33.333 0.00 9.41 35.65 3.77
1634 2213 8.919661 GCCAAGAGAATTTCAGAATTTTAGTTG 58.080 33.333 0.00 0.00 35.65 3.16
1635 2214 8.864087 AGCCAAGAGAATTTCAGAATTTTAGTT 58.136 29.630 0.00 0.00 35.65 2.24
1636 2215 8.414629 AGCCAAGAGAATTTCAGAATTTTAGT 57.585 30.769 0.00 0.00 35.65 2.24
1637 2216 8.517878 TGAGCCAAGAGAATTTCAGAATTTTAG 58.482 33.333 0.00 0.00 35.65 1.85
1638 2217 8.408043 TGAGCCAAGAGAATTTCAGAATTTTA 57.592 30.769 0.00 0.00 35.65 1.52
1639 2218 7.294017 TGAGCCAAGAGAATTTCAGAATTTT 57.706 32.000 0.00 0.00 35.65 1.82
1640 2219 6.906157 TGAGCCAAGAGAATTTCAGAATTT 57.094 33.333 0.00 0.00 35.65 1.82
1641 2220 7.177921 TGAATGAGCCAAGAGAATTTCAGAATT 59.822 33.333 0.00 0.00 38.16 2.17
1642 2221 6.662234 TGAATGAGCCAAGAGAATTTCAGAAT 59.338 34.615 0.00 0.00 0.00 2.40
1643 2222 6.005823 TGAATGAGCCAAGAGAATTTCAGAA 58.994 36.000 0.00 0.00 0.00 3.02
1644 2223 5.563592 TGAATGAGCCAAGAGAATTTCAGA 58.436 37.500 0.00 0.00 0.00 3.27
1645 2224 5.892160 TGAATGAGCCAAGAGAATTTCAG 57.108 39.130 0.00 0.00 0.00 3.02
1646 2225 5.393787 GCATGAATGAGCCAAGAGAATTTCA 60.394 40.000 0.00 0.00 0.00 2.69
1647 2226 5.041940 GCATGAATGAGCCAAGAGAATTTC 58.958 41.667 0.00 0.00 0.00 2.17
1648 2227 4.464951 TGCATGAATGAGCCAAGAGAATTT 59.535 37.500 0.00 0.00 0.00 1.82
1649 2228 4.021229 TGCATGAATGAGCCAAGAGAATT 58.979 39.130 0.00 0.00 0.00 2.17
1650 2229 3.380637 GTGCATGAATGAGCCAAGAGAAT 59.619 43.478 0.00 0.00 0.00 2.40
1651 2230 2.751259 GTGCATGAATGAGCCAAGAGAA 59.249 45.455 0.00 0.00 0.00 2.87
1652 2231 2.290450 TGTGCATGAATGAGCCAAGAGA 60.290 45.455 0.00 0.00 0.00 3.10
1653 2232 2.089201 TGTGCATGAATGAGCCAAGAG 58.911 47.619 0.00 0.00 0.00 2.85
1654 2233 1.814394 GTGTGCATGAATGAGCCAAGA 59.186 47.619 0.00 0.00 0.00 3.02
1655 2234 1.542472 TGTGTGCATGAATGAGCCAAG 59.458 47.619 0.00 0.00 0.00 3.61
1656 2235 1.618487 TGTGTGCATGAATGAGCCAA 58.382 45.000 0.00 0.00 0.00 4.52
1657 2236 1.842052 ATGTGTGCATGAATGAGCCA 58.158 45.000 0.00 0.00 33.37 4.75
1667 2246 1.072806 ACTCCACTCACATGTGTGCAT 59.927 47.619 24.63 5.52 45.25 3.96
1668 2247 0.469494 ACTCCACTCACATGTGTGCA 59.531 50.000 24.63 5.64 45.25 4.57
1669 2248 0.870393 CACTCCACTCACATGTGTGC 59.130 55.000 24.63 0.00 45.25 4.57
1670 2249 2.224137 ACTCACTCCACTCACATGTGTG 60.224 50.000 24.63 23.70 46.91 3.82
1671 2250 2.042464 ACTCACTCCACTCACATGTGT 58.958 47.619 24.63 4.31 36.30 3.72
1672 2251 2.036346 TCACTCACTCCACTCACATGTG 59.964 50.000 20.18 20.18 37.66 3.21
1673 2252 2.298446 CTCACTCACTCCACTCACATGT 59.702 50.000 0.00 0.00 0.00 3.21
1674 2253 2.353505 CCTCACTCACTCCACTCACATG 60.354 54.545 0.00 0.00 0.00 3.21
1675 2254 1.898472 CCTCACTCACTCCACTCACAT 59.102 52.381 0.00 0.00 0.00 3.21
1676 2255 1.332195 CCTCACTCACTCCACTCACA 58.668 55.000 0.00 0.00 0.00 3.58
1677 2256 0.037790 GCCTCACTCACTCCACTCAC 60.038 60.000 0.00 0.00 0.00 3.51
1678 2257 0.178950 AGCCTCACTCACTCCACTCA 60.179 55.000 0.00 0.00 0.00 3.41
1679 2258 1.840737 TAGCCTCACTCACTCCACTC 58.159 55.000 0.00 0.00 0.00 3.51
1680 2259 2.310779 TTAGCCTCACTCACTCCACT 57.689 50.000 0.00 0.00 0.00 4.00
1681 2260 2.300437 ACTTTAGCCTCACTCACTCCAC 59.700 50.000 0.00 0.00 0.00 4.02
1682 2261 2.609747 ACTTTAGCCTCACTCACTCCA 58.390 47.619 0.00 0.00 0.00 3.86
1683 2262 3.686916 AACTTTAGCCTCACTCACTCC 57.313 47.619 0.00 0.00 0.00 3.85
1684 2263 5.785243 ACTAAACTTTAGCCTCACTCACTC 58.215 41.667 8.26 0.00 0.00 3.51
1685 2264 5.279556 GGACTAAACTTTAGCCTCACTCACT 60.280 44.000 8.26 0.00 0.00 3.41
1686 2265 4.930405 GGACTAAACTTTAGCCTCACTCAC 59.070 45.833 8.26 0.00 0.00 3.51
1687 2266 4.020485 GGGACTAAACTTTAGCCTCACTCA 60.020 45.833 8.26 0.00 0.00 3.41
1688 2267 4.020485 TGGGACTAAACTTTAGCCTCACTC 60.020 45.833 8.26 0.00 0.00 3.51
1689 2268 3.908103 TGGGACTAAACTTTAGCCTCACT 59.092 43.478 8.26 0.00 0.00 3.41
1690 2269 4.281898 TGGGACTAAACTTTAGCCTCAC 57.718 45.455 8.26 2.37 0.00 3.51
1691 2270 4.080526 GGATGGGACTAAACTTTAGCCTCA 60.081 45.833 8.26 4.39 0.00 3.86
1692 2271 4.452825 GGATGGGACTAAACTTTAGCCTC 58.547 47.826 8.26 0.00 0.00 4.70
1693 2272 3.202373 GGGATGGGACTAAACTTTAGCCT 59.798 47.826 8.26 0.00 0.00 4.58
1694 2273 3.552875 GGGATGGGACTAAACTTTAGCC 58.447 50.000 8.26 9.85 0.00 3.93
1695 2274 3.203716 CGGGATGGGACTAAACTTTAGC 58.796 50.000 8.26 2.49 0.00 3.09
1696 2275 3.453353 TCCGGGATGGGACTAAACTTTAG 59.547 47.826 0.00 6.96 38.76 1.85
1697 2276 3.452878 TCCGGGATGGGACTAAACTTTA 58.547 45.455 0.00 0.00 38.76 1.85
1698 2277 2.271777 TCCGGGATGGGACTAAACTTT 58.728 47.619 0.00 0.00 38.76 2.66
1699 2278 1.961133 TCCGGGATGGGACTAAACTT 58.039 50.000 0.00 0.00 38.76 2.66
1700 2279 1.838077 CTTCCGGGATGGGACTAAACT 59.162 52.381 0.00 0.00 38.76 2.66
1701 2280 1.558294 ACTTCCGGGATGGGACTAAAC 59.442 52.381 13.81 0.00 38.76 2.01
1702 2281 1.961133 ACTTCCGGGATGGGACTAAA 58.039 50.000 13.81 0.00 38.76 1.85
1703 2282 1.557832 CAACTTCCGGGATGGGACTAA 59.442 52.381 13.81 0.00 38.76 2.24
1704 2283 1.200519 CAACTTCCGGGATGGGACTA 58.799 55.000 13.81 0.00 38.76 2.59
1705 2284 0.546747 TCAACTTCCGGGATGGGACT 60.547 55.000 13.81 0.00 38.76 3.85
1706 2285 0.107654 CTCAACTTCCGGGATGGGAC 60.108 60.000 13.81 0.00 38.76 4.46
1707 2286 0.252513 TCTCAACTTCCGGGATGGGA 60.253 55.000 13.81 4.84 38.76 4.37
1708 2287 0.618458 TTCTCAACTTCCGGGATGGG 59.382 55.000 13.81 2.42 38.76 4.00
1709 2288 2.027192 TCTTTCTCAACTTCCGGGATGG 60.027 50.000 13.81 5.58 40.09 3.51
1710 2289 3.265791 CTCTTTCTCAACTTCCGGGATG 58.734 50.000 0.00 8.29 0.00 3.51
1711 2290 2.907042 ACTCTTTCTCAACTTCCGGGAT 59.093 45.455 0.00 0.00 0.00 3.85
1712 2291 2.326428 ACTCTTTCTCAACTTCCGGGA 58.674 47.619 0.00 0.00 0.00 5.14
1713 2292 2.808543 CAACTCTTTCTCAACTTCCGGG 59.191 50.000 0.00 0.00 0.00 5.73
1714 2293 2.224314 GCAACTCTTTCTCAACTTCCGG 59.776 50.000 0.00 0.00 0.00 5.14
1715 2294 2.872245 TGCAACTCTTTCTCAACTTCCG 59.128 45.455 0.00 0.00 0.00 4.30
1716 2295 4.216366 GTGCAACTCTTTCTCAACTTCC 57.784 45.455 0.00 0.00 0.00 3.46
1739 2318 7.822822 GTGGTAGAAGAGCTCACCTTATAAAAA 59.177 37.037 17.77 0.00 32.04 1.94
1740 2319 7.180408 AGTGGTAGAAGAGCTCACCTTATAAAA 59.820 37.037 17.77 0.00 32.04 1.52
1741 2320 6.668283 AGTGGTAGAAGAGCTCACCTTATAAA 59.332 38.462 17.77 0.00 32.04 1.40
1742 2321 6.195700 AGTGGTAGAAGAGCTCACCTTATAA 58.804 40.000 17.77 0.00 32.04 0.98
1743 2322 5.767670 AGTGGTAGAAGAGCTCACCTTATA 58.232 41.667 17.77 0.21 32.04 0.98
1744 2323 4.615513 AGTGGTAGAAGAGCTCACCTTAT 58.384 43.478 17.77 1.27 32.04 1.73
1745 2324 4.048970 AGTGGTAGAAGAGCTCACCTTA 57.951 45.455 17.77 0.00 32.04 2.69
1746 2325 2.896039 AGTGGTAGAAGAGCTCACCTT 58.104 47.619 17.77 0.63 32.04 3.50
1747 2326 2.564947 CAAGTGGTAGAAGAGCTCACCT 59.435 50.000 17.77 14.23 32.04 4.00
1748 2327 2.300437 ACAAGTGGTAGAAGAGCTCACC 59.700 50.000 17.77 14.97 0.00 4.02
1749 2328 3.669251 ACAAGTGGTAGAAGAGCTCAC 57.331 47.619 17.77 9.64 0.00 3.51
1750 2329 5.016831 TCATACAAGTGGTAGAAGAGCTCA 58.983 41.667 17.77 0.00 34.92 4.26
1751 2330 5.584253 TCATACAAGTGGTAGAAGAGCTC 57.416 43.478 5.27 5.27 34.92 4.09
1752 2331 4.142049 GCTCATACAAGTGGTAGAAGAGCT 60.142 45.833 16.53 0.00 44.01 4.09
1753 2332 4.116238 GCTCATACAAGTGGTAGAAGAGC 58.884 47.826 11.55 11.55 42.60 4.09
1754 2333 5.330455 TGCTCATACAAGTGGTAGAAGAG 57.670 43.478 0.00 0.00 34.92 2.85
1755 2334 5.422012 TCATGCTCATACAAGTGGTAGAAGA 59.578 40.000 0.00 0.00 34.92 2.87
1756 2335 5.664457 TCATGCTCATACAAGTGGTAGAAG 58.336 41.667 0.00 0.00 34.92 2.85
1757 2336 5.422012 TCTCATGCTCATACAAGTGGTAGAA 59.578 40.000 0.00 0.00 34.92 2.10
1758 2337 4.956075 TCTCATGCTCATACAAGTGGTAGA 59.044 41.667 0.00 0.00 34.92 2.59
1759 2338 5.268118 TCTCATGCTCATACAAGTGGTAG 57.732 43.478 0.00 0.00 34.92 3.18
1760 2339 5.422012 TCTTCTCATGCTCATACAAGTGGTA 59.578 40.000 0.00 0.00 36.16 3.25
1761 2340 4.223700 TCTTCTCATGCTCATACAAGTGGT 59.776 41.667 0.00 0.00 0.00 4.16
1762 2341 4.763073 TCTTCTCATGCTCATACAAGTGG 58.237 43.478 0.00 0.00 0.00 4.00
1763 2342 5.658468 TCTCTTCTCATGCTCATACAAGTG 58.342 41.667 0.00 0.00 0.00 3.16
1764 2343 5.929058 TCTCTTCTCATGCTCATACAAGT 57.071 39.130 0.00 0.00 0.00 3.16
1765 2344 6.476380 GTCTTCTCTTCTCATGCTCATACAAG 59.524 42.308 0.00 0.00 0.00 3.16
1766 2345 6.336566 GTCTTCTCTTCTCATGCTCATACAA 58.663 40.000 0.00 0.00 0.00 2.41
1767 2346 5.163468 GGTCTTCTCTTCTCATGCTCATACA 60.163 44.000 0.00 0.00 0.00 2.29
1768 2347 5.068987 AGGTCTTCTCTTCTCATGCTCATAC 59.931 44.000 0.00 0.00 0.00 2.39
1769 2348 5.207354 AGGTCTTCTCTTCTCATGCTCATA 58.793 41.667 0.00 0.00 0.00 2.15
1770 2349 4.032310 AGGTCTTCTCTTCTCATGCTCAT 58.968 43.478 0.00 0.00 0.00 2.90
1771 2350 3.439154 AGGTCTTCTCTTCTCATGCTCA 58.561 45.455 0.00 0.00 0.00 4.26
1772 2351 4.400884 TGTAGGTCTTCTCTTCTCATGCTC 59.599 45.833 0.00 0.00 0.00 4.26
1773 2352 4.159506 GTGTAGGTCTTCTCTTCTCATGCT 59.840 45.833 0.00 0.00 0.00 3.79
1774 2353 4.429108 GTGTAGGTCTTCTCTTCTCATGC 58.571 47.826 0.00 0.00 0.00 4.06
1775 2354 4.156922 ACGTGTAGGTCTTCTCTTCTCATG 59.843 45.833 0.00 0.00 0.00 3.07
1776 2355 4.156922 CACGTGTAGGTCTTCTCTTCTCAT 59.843 45.833 7.58 0.00 0.00 2.90
1777 2356 3.502595 CACGTGTAGGTCTTCTCTTCTCA 59.497 47.826 7.58 0.00 0.00 3.27
1778 2357 3.671164 GCACGTGTAGGTCTTCTCTTCTC 60.671 52.174 18.38 0.00 0.00 2.87
1779 2358 2.229302 GCACGTGTAGGTCTTCTCTTCT 59.771 50.000 18.38 0.00 0.00 2.85
1780 2359 2.597520 GCACGTGTAGGTCTTCTCTTC 58.402 52.381 18.38 0.00 0.00 2.87
1781 2360 1.068472 CGCACGTGTAGGTCTTCTCTT 60.068 52.381 18.38 0.00 0.00 2.85
1782 2361 0.522180 CGCACGTGTAGGTCTTCTCT 59.478 55.000 18.38 0.00 0.00 3.10
1783 2362 1.071567 GCGCACGTGTAGGTCTTCTC 61.072 60.000 18.38 0.00 0.00 2.87
1784 2363 1.080705 GCGCACGTGTAGGTCTTCT 60.081 57.895 18.38 0.00 0.00 2.85
1785 2364 1.071567 GAGCGCACGTGTAGGTCTTC 61.072 60.000 26.32 10.63 0.00 2.87
1786 2365 1.080705 GAGCGCACGTGTAGGTCTT 60.081 57.895 26.32 6.39 0.00 3.01
1787 2366 2.567049 GAGCGCACGTGTAGGTCT 59.433 61.111 26.32 14.29 0.00 3.85
1788 2367 2.506438 GGAGCGCACGTGTAGGTC 60.506 66.667 25.92 25.92 0.00 3.85
1789 2368 2.989824 AGGAGCGCACGTGTAGGT 60.990 61.111 18.38 16.73 0.00 3.08
1790 2369 2.202623 GAGGAGCGCACGTGTAGG 60.203 66.667 18.38 8.17 0.00 3.18
1791 2370 2.202623 GGAGGAGCGCACGTGTAG 60.203 66.667 18.38 12.81 0.00 2.74
1792 2371 2.675423 AGGAGGAGCGCACGTGTA 60.675 61.111 18.38 0.00 0.00 2.90
1793 2372 4.057428 GAGGAGGAGCGCACGTGT 62.057 66.667 18.38 0.00 0.00 4.49
1794 2373 4.803426 GGAGGAGGAGCGCACGTG 62.803 72.222 12.28 12.28 0.00 4.49
1796 2375 4.200283 GAGGAGGAGGAGCGCACG 62.200 72.222 11.47 0.00 0.00 5.34
1797 2376 4.200283 CGAGGAGGAGGAGCGCAC 62.200 72.222 11.47 1.97 0.00 5.34
1814 2393 4.292178 CTGATCGCCCCTCTCCGC 62.292 72.222 0.00 0.00 0.00 5.54
1815 2394 3.610669 CCTGATCGCCCCTCTCCG 61.611 72.222 0.00 0.00 0.00 4.63
1816 2395 1.627297 AAACCTGATCGCCCCTCTCC 61.627 60.000 0.00 0.00 0.00 3.71
1817 2396 0.253327 AAAACCTGATCGCCCCTCTC 59.747 55.000 0.00 0.00 0.00 3.20
1818 2397 0.698818 AAAAACCTGATCGCCCCTCT 59.301 50.000 0.00 0.00 0.00 3.69
1819 2398 0.811281 CAAAAACCTGATCGCCCCTC 59.189 55.000 0.00 0.00 0.00 4.30
1820 2399 0.611896 CCAAAAACCTGATCGCCCCT 60.612 55.000 0.00 0.00 0.00 4.79
1821 2400 1.604147 CCCAAAAACCTGATCGCCCC 61.604 60.000 0.00 0.00 0.00 5.80
1822 2401 1.604147 CCCCAAAAACCTGATCGCCC 61.604 60.000 0.00 0.00 0.00 6.13
1823 2402 0.610785 TCCCCAAAAACCTGATCGCC 60.611 55.000 0.00 0.00 0.00 5.54
1824 2403 0.811281 CTCCCCAAAAACCTGATCGC 59.189 55.000 0.00 0.00 0.00 4.58
1825 2404 0.811281 GCTCCCCAAAAACCTGATCG 59.189 55.000 0.00 0.00 0.00 3.69
1826 2405 0.811281 CGCTCCCCAAAAACCTGATC 59.189 55.000 0.00 0.00 0.00 2.92
1827 2406 1.250840 GCGCTCCCCAAAAACCTGAT 61.251 55.000 0.00 0.00 0.00 2.90
1828 2407 1.901464 GCGCTCCCCAAAAACCTGA 60.901 57.895 0.00 0.00 0.00 3.86
1829 2408 2.199652 TGCGCTCCCCAAAAACCTG 61.200 57.895 9.73 0.00 0.00 4.00
1830 2409 2.197324 TGCGCTCCCCAAAAACCT 59.803 55.556 9.73 0.00 0.00 3.50
1831 2410 2.142357 GAGTGCGCTCCCCAAAAACC 62.142 60.000 16.69 0.00 35.76 3.27
1832 2411 1.285950 GAGTGCGCTCCCCAAAAAC 59.714 57.895 16.69 0.00 35.76 2.43
1833 2412 2.258013 CGAGTGCGCTCCCCAAAAA 61.258 57.895 21.21 0.00 38.49 1.94
1834 2413 2.668212 CGAGTGCGCTCCCCAAAA 60.668 61.111 21.21 0.00 38.49 2.44
1855 2434 4.724602 TCGTCGCTGCCAGCAGTC 62.725 66.667 18.21 11.73 42.58 3.51
1857 2436 4.731612 AGTCGTCGCTGCCAGCAG 62.732 66.667 18.21 15.34 42.58 4.24
1858 2437 4.299547 AAGTCGTCGCTGCCAGCA 62.300 61.111 18.21 0.79 42.58 4.41
1859 2438 3.482783 GAAGTCGTCGCTGCCAGC 61.483 66.667 6.63 6.63 38.02 4.85
1860 2439 3.175240 CGAAGTCGTCGCTGCCAG 61.175 66.667 0.00 0.00 44.14 4.85
1876 2455 1.662845 GGAAGAAGTCGTCGTTCGCG 61.663 60.000 0.00 0.00 42.98 5.87
1877 2456 1.342796 GGGAAGAAGTCGTCGTTCGC 61.343 60.000 0.00 0.00 39.67 4.70
1878 2457 0.731855 GGGGAAGAAGTCGTCGTTCG 60.732 60.000 0.00 0.00 41.41 3.95
1879 2458 0.731855 CGGGGAAGAAGTCGTCGTTC 60.732 60.000 0.00 0.00 0.00 3.95
1880 2459 1.174712 TCGGGGAAGAAGTCGTCGTT 61.175 55.000 0.00 0.00 0.00 3.85
1881 2460 0.964358 ATCGGGGAAGAAGTCGTCGT 60.964 55.000 0.00 0.00 0.00 4.34
1882 2461 0.248539 GATCGGGGAAGAAGTCGTCG 60.249 60.000 0.00 0.00 0.00 5.12
1883 2462 1.065851 GAGATCGGGGAAGAAGTCGTC 59.934 57.143 0.00 0.00 0.00 4.20
1884 2463 1.104630 GAGATCGGGGAAGAAGTCGT 58.895 55.000 0.00 0.00 0.00 4.34
1885 2464 0.029567 CGAGATCGGGGAAGAAGTCG 59.970 60.000 0.00 0.00 35.37 4.18
1886 2465 3.949031 CGAGATCGGGGAAGAAGTC 57.051 57.895 0.00 0.00 35.37 3.01
1897 2476 1.586564 GACGAGGTTGCCGAGATCG 60.587 63.158 0.00 0.00 39.22 3.69
1898 2477 1.227002 GGACGAGGTTGCCGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
1899 2478 1.668101 GAGGACGAGGTTGCCGAGAT 61.668 60.000 0.00 0.00 0.00 2.75
1900 2479 2.282958 AGGACGAGGTTGCCGAGA 60.283 61.111 0.00 0.00 0.00 4.04
1901 2480 2.182030 GAGGACGAGGTTGCCGAG 59.818 66.667 0.00 0.00 0.00 4.63
1902 2481 3.744719 CGAGGACGAGGTTGCCGA 61.745 66.667 0.00 0.00 42.66 5.54
1903 2482 3.744719 TCGAGGACGAGGTTGCCG 61.745 66.667 0.00 0.00 43.81 5.69
1913 2492 1.153823 CACCCATGTCGTCGAGGAC 60.154 63.158 27.00 27.00 37.45 3.85
1914 2493 1.303806 TCACCCATGTCGTCGAGGA 60.304 57.895 3.17 3.17 0.00 3.71
1915 2494 1.153823 GTCACCCATGTCGTCGAGG 60.154 63.158 0.00 0.00 0.00 4.63
1916 2495 0.038618 TTGTCACCCATGTCGTCGAG 60.039 55.000 0.00 0.00 0.00 4.04
1917 2496 0.606096 ATTGTCACCCATGTCGTCGA 59.394 50.000 0.00 0.00 0.00 4.20
1918 2497 0.721154 CATTGTCACCCATGTCGTCG 59.279 55.000 0.00 0.00 0.00 5.12
1919 2498 1.732259 GACATTGTCACCCATGTCGTC 59.268 52.381 11.93 0.00 34.85 4.20
1920 2499 1.071542 TGACATTGTCACCCATGTCGT 59.928 47.619 15.41 0.00 44.48 4.34
1921 2500 1.807139 TGACATTGTCACCCATGTCG 58.193 50.000 15.41 0.00 44.48 4.35
1922 2501 3.674138 GCATTGACATTGTCACCCATGTC 60.674 47.826 18.84 11.86 42.60 3.06
1923 2502 2.231964 GCATTGACATTGTCACCCATGT 59.768 45.455 18.84 0.00 42.60 3.21
1924 2503 2.417651 GGCATTGACATTGTCACCCATG 60.418 50.000 18.84 18.96 42.60 3.66
1925 2504 1.826720 GGCATTGACATTGTCACCCAT 59.173 47.619 18.84 7.72 42.60 4.00
1926 2505 1.255882 GGCATTGACATTGTCACCCA 58.744 50.000 18.84 5.58 42.60 4.51
1927 2506 0.171007 CGGCATTGACATTGTCACCC 59.829 55.000 18.84 16.74 42.60 4.61
1928 2507 0.171007 CCGGCATTGACATTGTCACC 59.829 55.000 18.84 15.29 42.60 4.02
1929 2508 0.456653 GCCGGCATTGACATTGTCAC 60.457 55.000 24.80 8.03 42.60 3.67
1930 2509 1.882311 GCCGGCATTGACATTGTCA 59.118 52.632 24.80 15.41 41.09 3.58
1931 2510 1.226379 CGCCGGCATTGACATTGTC 60.226 57.895 28.98 9.93 0.00 3.18
1932 2511 2.699768 CCGCCGGCATTGACATTGT 61.700 57.895 28.98 0.00 0.00 2.71
1933 2512 2.102749 CCGCCGGCATTGACATTG 59.897 61.111 28.98 6.19 0.00 2.82
1934 2513 2.361104 ACCGCCGGCATTGACATT 60.361 55.556 28.98 0.00 0.00 2.71
1935 2514 3.133464 CACCGCCGGCATTGACAT 61.133 61.111 28.98 0.00 0.00 3.06
1936 2515 4.634703 ACACCGCCGGCATTGACA 62.635 61.111 28.98 0.00 0.00 3.58
1937 2516 3.361977 AACACCGCCGGCATTGAC 61.362 61.111 28.98 0.00 0.00 3.18
1938 2517 3.361158 CAACACCGCCGGCATTGA 61.361 61.111 28.98 0.00 0.00 2.57
1956 2535 2.586079 CATACGGTGCAGCGGGAG 60.586 66.667 37.73 23.81 0.00 4.30
1957 2536 3.387091 ACATACGGTGCAGCGGGA 61.387 61.111 37.73 26.82 0.00 5.14
1958 2537 3.195002 CACATACGGTGCAGCGGG 61.195 66.667 37.73 28.25 41.36 6.13
1966 2545 5.011125 CAGGAAGGATAGAATCACATACGGT 59.989 44.000 0.00 0.00 0.00 4.83
1967 2546 5.011125 ACAGGAAGGATAGAATCACATACGG 59.989 44.000 0.00 0.00 0.00 4.02
1968 2547 6.090483 ACAGGAAGGATAGAATCACATACG 57.910 41.667 0.00 0.00 0.00 3.06
1969 2548 6.642950 CGAACAGGAAGGATAGAATCACATAC 59.357 42.308 0.00 0.00 0.00 2.39
1970 2549 6.549736 TCGAACAGGAAGGATAGAATCACATA 59.450 38.462 0.00 0.00 0.00 2.29
1971 2550 5.363868 TCGAACAGGAAGGATAGAATCACAT 59.636 40.000 0.00 0.00 0.00 3.21
1972 2551 4.709886 TCGAACAGGAAGGATAGAATCACA 59.290 41.667 0.00 0.00 0.00 3.58
1973 2552 5.067936 TCTCGAACAGGAAGGATAGAATCAC 59.932 44.000 0.00 0.00 0.00 3.06
1974 2553 5.201243 TCTCGAACAGGAAGGATAGAATCA 58.799 41.667 0.00 0.00 0.00 2.57
1975 2554 5.776173 TCTCGAACAGGAAGGATAGAATC 57.224 43.478 0.00 0.00 0.00 2.52
1976 2555 5.048364 CGATCTCGAACAGGAAGGATAGAAT 60.048 44.000 0.00 0.00 43.02 2.40
1977 2556 4.276183 CGATCTCGAACAGGAAGGATAGAA 59.724 45.833 0.00 0.00 43.02 2.10
1978 2557 3.815962 CGATCTCGAACAGGAAGGATAGA 59.184 47.826 0.00 0.00 43.02 1.98
1979 2558 3.566322 ACGATCTCGAACAGGAAGGATAG 59.434 47.826 6.60 0.00 43.02 2.08
1980 2559 3.315470 CACGATCTCGAACAGGAAGGATA 59.685 47.826 6.60 0.00 43.02 2.59
1981 2560 2.099921 CACGATCTCGAACAGGAAGGAT 59.900 50.000 6.60 0.00 43.02 3.24
1982 2561 1.472878 CACGATCTCGAACAGGAAGGA 59.527 52.381 6.60 0.00 43.02 3.36
1983 2562 1.469940 CCACGATCTCGAACAGGAAGG 60.470 57.143 6.60 0.00 43.02 3.46
1984 2563 1.202582 ACCACGATCTCGAACAGGAAG 59.797 52.381 6.60 0.00 43.02 3.46
1985 2564 1.254026 ACCACGATCTCGAACAGGAA 58.746 50.000 6.60 0.00 43.02 3.36
1986 2565 2.014857 CTACCACGATCTCGAACAGGA 58.985 52.381 6.60 0.00 43.02 3.86
1987 2566 2.014857 TCTACCACGATCTCGAACAGG 58.985 52.381 6.60 5.32 43.02 4.00
1988 2567 3.759527 TTCTACCACGATCTCGAACAG 57.240 47.619 6.60 0.00 43.02 3.16
1989 2568 4.157105 TGAATTCTACCACGATCTCGAACA 59.843 41.667 7.05 0.00 43.02 3.18
1990 2569 4.669318 TGAATTCTACCACGATCTCGAAC 58.331 43.478 7.05 0.00 43.02 3.95
1991 2570 4.976224 TGAATTCTACCACGATCTCGAA 57.024 40.909 7.05 0.00 43.02 3.71
1999 2578 8.755941 CATACTAGAAACATGAATTCTACCACG 58.244 37.037 16.49 11.76 38.13 4.94
2000 2579 9.601217 ACATACTAGAAACATGAATTCTACCAC 57.399 33.333 16.49 0.00 38.13 4.16
2006 2585 6.543831 AGGGCACATACTAGAAACATGAATTC 59.456 38.462 0.00 3.71 0.00 2.17
2009 2588 5.435686 AGGGCACATACTAGAAACATGAA 57.564 39.130 0.00 0.00 0.00 2.57
2010 2589 5.897250 TCTAGGGCACATACTAGAAACATGA 59.103 40.000 0.00 0.00 41.84 3.07
2011 2590 6.161855 TCTAGGGCACATACTAGAAACATG 57.838 41.667 0.00 0.00 41.84 3.21
2013 2592 5.661312 ACATCTAGGGCACATACTAGAAACA 59.339 40.000 0.00 0.00 46.12 2.83
2016 2595 7.950684 AGATAACATCTAGGGCACATACTAGAA 59.049 37.037 0.00 0.00 46.12 2.10
2017 2596 7.394641 CAGATAACATCTAGGGCACATACTAGA 59.605 40.741 0.00 4.14 46.80 2.43
2018 2597 7.177568 ACAGATAACATCTAGGGCACATACTAG 59.822 40.741 0.00 0.00 37.58 2.57
2019 2598 7.010771 ACAGATAACATCTAGGGCACATACTA 58.989 38.462 0.00 0.00 37.58 1.82
2020 2599 5.841237 ACAGATAACATCTAGGGCACATACT 59.159 40.000 0.00 0.00 37.58 2.12
2021 2600 6.102897 ACAGATAACATCTAGGGCACATAC 57.897 41.667 0.00 0.00 37.58 2.39
2022 2601 6.326323 TGAACAGATAACATCTAGGGCACATA 59.674 38.462 0.00 0.00 37.58 2.29
2023 2602 5.130975 TGAACAGATAACATCTAGGGCACAT 59.869 40.000 0.00 0.00 37.58 3.21
2024 2603 4.469586 TGAACAGATAACATCTAGGGCACA 59.530 41.667 0.00 0.00 37.58 4.57
2025 2604 5.023533 TGAACAGATAACATCTAGGGCAC 57.976 43.478 0.00 0.00 37.58 5.01
2026 2605 5.604231 AGATGAACAGATAACATCTAGGGCA 59.396 40.000 0.00 0.00 45.55 5.36
2027 2606 5.931146 CAGATGAACAGATAACATCTAGGGC 59.069 44.000 0.00 0.00 45.61 5.19
2028 2607 5.931146 GCAGATGAACAGATAACATCTAGGG 59.069 44.000 0.00 0.00 45.61 3.53
2029 2608 6.757237 AGCAGATGAACAGATAACATCTAGG 58.243 40.000 0.00 0.00 45.61 3.02
2030 2609 9.356433 CATAGCAGATGAACAGATAACATCTAG 57.644 37.037 0.00 0.00 45.61 2.43
2031 2610 7.816513 GCATAGCAGATGAACAGATAACATCTA 59.183 37.037 0.00 0.00 45.61 1.98
2033 2612 6.649973 AGCATAGCAGATGAACAGATAACATC 59.350 38.462 2.96 0.00 40.14 3.06
2034 2613 6.531923 AGCATAGCAGATGAACAGATAACAT 58.468 36.000 2.96 0.00 0.00 2.71
2035 2614 5.922053 AGCATAGCAGATGAACAGATAACA 58.078 37.500 2.96 0.00 0.00 2.41
2036 2615 7.151308 ACTAGCATAGCAGATGAACAGATAAC 58.849 38.462 2.96 0.00 44.39 1.89
2037 2616 7.295322 ACTAGCATAGCAGATGAACAGATAA 57.705 36.000 2.96 0.00 44.39 1.75
2038 2617 6.907853 ACTAGCATAGCAGATGAACAGATA 57.092 37.500 2.96 0.00 44.39 1.98
2039 2618 5.804944 ACTAGCATAGCAGATGAACAGAT 57.195 39.130 2.96 0.00 44.39 2.90
2040 2619 5.127682 TGAACTAGCATAGCAGATGAACAGA 59.872 40.000 2.96 0.00 44.39 3.41
2041 2620 5.233902 GTGAACTAGCATAGCAGATGAACAG 59.766 44.000 2.96 0.00 44.39 3.16
2042 2621 5.111989 GTGAACTAGCATAGCAGATGAACA 58.888 41.667 2.96 0.00 44.39 3.18
2043 2622 5.111989 TGTGAACTAGCATAGCAGATGAAC 58.888 41.667 2.96 0.00 44.39 3.18
2044 2623 5.343307 TGTGAACTAGCATAGCAGATGAA 57.657 39.130 2.96 0.00 44.39 2.57
2045 2624 5.069516 TCATGTGAACTAGCATAGCAGATGA 59.930 40.000 0.00 0.00 44.39 2.92
2046 2625 5.295152 TCATGTGAACTAGCATAGCAGATG 58.705 41.667 0.00 0.00 44.39 2.90
2047 2626 5.541953 TCATGTGAACTAGCATAGCAGAT 57.458 39.130 0.00 0.00 44.39 2.90
2048 2627 5.541953 ATCATGTGAACTAGCATAGCAGA 57.458 39.130 0.00 0.00 44.39 4.26
2049 2628 6.927936 ACTAATCATGTGAACTAGCATAGCAG 59.072 38.462 0.00 0.00 44.39 4.24
2050 2629 6.820335 ACTAATCATGTGAACTAGCATAGCA 58.180 36.000 0.00 0.00 44.39 3.49
2051 2630 7.721286 AACTAATCATGTGAACTAGCATAGC 57.279 36.000 0.00 0.00 44.39 2.97
2055 2634 9.890629 AGATTAAACTAATCATGTGAACTAGCA 57.109 29.630 8.66 0.00 45.41 3.49
2059 2638 9.950496 ACAGAGATTAAACTAATCATGTGAACT 57.050 29.630 12.65 0.00 45.41 3.01
2062 2641 9.725019 ACAACAGAGATTAAACTAATCATGTGA 57.275 29.630 13.53 0.00 45.41 3.58
2072 2651 8.993121 CATGACTACAACAACAGAGATTAAACT 58.007 33.333 0.00 0.00 0.00 2.66
2073 2652 8.988934 TCATGACTACAACAACAGAGATTAAAC 58.011 33.333 0.00 0.00 0.00 2.01
2074 2653 9.725019 ATCATGACTACAACAACAGAGATTAAA 57.275 29.630 0.00 0.00 0.00 1.52
2075 2654 9.725019 AATCATGACTACAACAACAGAGATTAA 57.275 29.630 0.00 0.00 0.00 1.40
2076 2655 9.725019 AAATCATGACTACAACAACAGAGATTA 57.275 29.630 0.00 0.00 0.00 1.75
2077 2656 8.627208 AAATCATGACTACAACAACAGAGATT 57.373 30.769 0.00 0.00 0.00 2.40
2078 2657 9.896645 ATAAATCATGACTACAACAACAGAGAT 57.103 29.630 0.00 0.00 0.00 2.75
2079 2658 9.371136 GATAAATCATGACTACAACAACAGAGA 57.629 33.333 0.00 0.00 0.00 3.10
2080 2659 9.376075 AGATAAATCATGACTACAACAACAGAG 57.624 33.333 0.00 0.00 0.00 3.35
2081 2660 9.725019 AAGATAAATCATGACTACAACAACAGA 57.275 29.630 0.00 0.00 0.00 3.41
2082 2661 9.979270 GAAGATAAATCATGACTACAACAACAG 57.021 33.333 0.00 0.00 0.00 3.16
2083 2662 9.725019 AGAAGATAAATCATGACTACAACAACA 57.275 29.630 0.00 0.00 0.00 3.33
2084 2663 9.979270 CAGAAGATAAATCATGACTACAACAAC 57.021 33.333 0.00 0.00 0.00 3.32
2085 2664 9.725019 ACAGAAGATAAATCATGACTACAACAA 57.275 29.630 0.00 0.00 0.00 2.83
2086 2665 9.725019 AACAGAAGATAAATCATGACTACAACA 57.275 29.630 0.00 0.00 0.00 3.33
2093 2672 9.869844 CCGAATAAACAGAAGATAAATCATGAC 57.130 33.333 0.00 0.00 0.00 3.06
2094 2673 9.830975 TCCGAATAAACAGAAGATAAATCATGA 57.169 29.630 0.00 0.00 0.00 3.07
2104 2683 9.031360 CGAGATTTAATCCGAATAAACAGAAGA 57.969 33.333 0.78 0.00 0.00 2.87
2105 2684 8.818057 ACGAGATTTAATCCGAATAAACAGAAG 58.182 33.333 17.75 0.00 0.00 2.85
2106 2685 8.712285 ACGAGATTTAATCCGAATAAACAGAA 57.288 30.769 17.75 0.00 0.00 3.02
2107 2686 9.459640 CTACGAGATTTAATCCGAATAAACAGA 57.540 33.333 17.75 0.00 0.00 3.41
2108 2687 9.245962 ACTACGAGATTTAATCCGAATAAACAG 57.754 33.333 17.75 8.49 0.00 3.16
2115 2694 8.545420 GCAAATTACTACGAGATTTAATCCGAA 58.455 33.333 17.75 6.53 0.00 4.30
2116 2695 7.924412 AGCAAATTACTACGAGATTTAATCCGA 59.076 33.333 17.75 5.77 0.00 4.55
2117 2696 8.073355 AGCAAATTACTACGAGATTTAATCCG 57.927 34.615 12.00 12.00 0.00 4.18
2118 2697 9.042008 TGAGCAAATTACTACGAGATTTAATCC 57.958 33.333 0.78 0.00 0.00 3.01
2125 2704 9.209175 GGAAATATGAGCAAATTACTACGAGAT 57.791 33.333 0.00 0.00 0.00 2.75
2126 2705 8.201464 TGGAAATATGAGCAAATTACTACGAGA 58.799 33.333 0.00 0.00 0.00 4.04
2127 2706 8.365399 TGGAAATATGAGCAAATTACTACGAG 57.635 34.615 0.00 0.00 0.00 4.18
2128 2707 8.609176 GTTGGAAATATGAGCAAATTACTACGA 58.391 33.333 0.00 0.00 0.00 3.43
2129 2708 8.394877 TGTTGGAAATATGAGCAAATTACTACG 58.605 33.333 0.00 0.00 0.00 3.51
2153 2732 8.994429 TTTACAACAATTTGAACAGTTCATGT 57.006 26.923 16.89 17.42 39.84 3.21
2200 2779 7.568349 AGTGAAAGCTCATTCCACATATCTTA 58.432 34.615 0.00 0.00 33.05 2.10
2285 2864 5.374921 AGATGCTAGAAATTATGCAGCACT 58.625 37.500 0.00 0.00 44.36 4.40
2351 2932 9.643693 AGACACATTATTTGAAAAAGGCTATTG 57.356 29.630 0.00 0.00 0.00 1.90
2364 2945 9.655769 CCTCGATCAATAAAGACACATTATTTG 57.344 33.333 0.00 0.00 32.15 2.32
2365 2946 9.396022 ACCTCGATCAATAAAGACACATTATTT 57.604 29.630 0.00 0.00 32.15 1.40
2366 2947 8.964476 ACCTCGATCAATAAAGACACATTATT 57.036 30.769 0.00 0.00 34.20 1.40
2368 2949 9.878667 TTTACCTCGATCAATAAAGACACATTA 57.121 29.630 0.00 0.00 0.00 1.90
2369 2950 8.665685 GTTTACCTCGATCAATAAAGACACATT 58.334 33.333 0.00 0.00 0.00 2.71
2370 2951 7.010183 CGTTTACCTCGATCAATAAAGACACAT 59.990 37.037 0.00 0.00 0.00 3.21
2371 2952 6.309494 CGTTTACCTCGATCAATAAAGACACA 59.691 38.462 0.00 0.00 0.00 3.72
2372 2953 6.309737 ACGTTTACCTCGATCAATAAAGACAC 59.690 38.462 0.00 0.00 0.00 3.67
2373 2954 6.392354 ACGTTTACCTCGATCAATAAAGACA 58.608 36.000 0.00 0.00 0.00 3.41
2374 2955 6.882458 ACGTTTACCTCGATCAATAAAGAC 57.118 37.500 0.00 0.00 0.00 3.01
2375 2956 8.246180 ACTAACGTTTACCTCGATCAATAAAGA 58.754 33.333 5.91 0.00 0.00 2.52
2376 2957 8.403606 ACTAACGTTTACCTCGATCAATAAAG 57.596 34.615 5.91 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.