Multiple sequence alignment - TraesCS1A01G314400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G314400 chr1A 100.000 5441 0 0 1 5441 506286655 506281215 0.000000e+00 10048.0
1 TraesCS1A01G314400 chr1A 93.243 740 27 10 1 723 506306195 506305462 0.000000e+00 1068.0
2 TraesCS1A01G314400 chr1D 96.435 4264 111 18 771 5013 410468444 410464201 0.000000e+00 6994.0
3 TraesCS1A01G314400 chr1D 87.365 554 28 15 1 518 410469167 410468620 1.010000e-166 597.0
4 TraesCS1A01G314400 chr1B 97.047 3115 83 4 764 3874 553021302 553018193 0.000000e+00 5234.0
5 TraesCS1A01G314400 chr1B 93.201 1162 43 10 3873 5013 553018115 553016969 0.000000e+00 1676.0
6 TraesCS1A01G314400 chr1B 87.564 587 25 13 1 553 553022031 553021459 2.140000e-178 636.0
7 TraesCS1A01G314400 chr1B 85.321 109 8 4 666 766 553021444 553021336 7.450000e-19 106.0
8 TraesCS1A01G314400 chr6B 83.003 1465 188 43 2857 4296 632883997 632885425 0.000000e+00 1269.0
9 TraesCS1A01G314400 chr6D 92.582 728 42 8 3118 3837 163354726 163354003 0.000000e+00 1035.0
10 TraesCS1A01G314400 chr6D 83.251 806 112 14 3497 4296 419889458 419890246 0.000000e+00 719.0
11 TraesCS1A01G314400 chr6D 82.923 650 83 21 2860 3493 419888774 419889411 1.320000e-155 560.0
12 TraesCS1A01G314400 chr4D 92.747 648 43 4 3193 3837 447981375 447980729 0.000000e+00 933.0
13 TraesCS1A01G314400 chr4D 84.437 302 19 10 110 384 435604403 435604703 6.940000e-69 272.0
14 TraesCS1A01G314400 chr2A 99.050 421 4 0 5013 5433 677498599 677498179 0.000000e+00 756.0
15 TraesCS1A01G314400 chr2A 92.037 427 32 2 3413 3837 711072185 711071759 2.800000e-167 599.0
16 TraesCS1A01G314400 chr6A 82.379 891 118 23 3409 4291 562941812 562942671 0.000000e+00 739.0
17 TraesCS1A01G314400 chr6A 86.052 423 50 5 3870 4291 562940938 562941352 3.870000e-121 446.0
18 TraesCS1A01G314400 chr2B 97.892 427 7 2 5009 5434 234340039 234339614 0.000000e+00 737.0
19 TraesCS1A01G314400 chr2B 92.791 430 28 3 3410 3837 654361146 654361574 2.150000e-173 619.0
20 TraesCS1A01G314400 chr5B 91.553 438 32 5 3403 3837 614979987 614980422 2.800000e-167 599.0
21 TraesCS1A01G314400 chr7B 92.037 427 31 3 3413 3837 686930785 686930360 1.010000e-166 597.0
22 TraesCS1A01G314400 chr7B 96.175 183 6 1 5254 5435 217244024 217243842 1.150000e-76 298.0
23 TraesCS1A01G314400 chr7B 94.697 132 6 1 5125 5255 217280179 217280048 2.570000e-48 204.0
24 TraesCS1A01G314400 chr7B 95.522 67 3 0 5009 5075 217280236 217280170 2.070000e-19 108.0
25 TraesCS1A01G314400 chrUn 89.696 427 37 4 5009 5434 30029392 30028972 6.200000e-149 538.0
26 TraesCS1A01G314400 chr4A 76.724 232 46 7 5208 5435 179431681 179431908 7.400000e-24 122.0
27 TraesCS1A01G314400 chr3A 100.000 28 0 0 3848 3875 724592776 724592749 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G314400 chr1A 506281215 506286655 5440 True 10048.0 10048 100.00000 1 5441 1 chr1A.!!$R1 5440
1 TraesCS1A01G314400 chr1A 506305462 506306195 733 True 1068.0 1068 93.24300 1 723 1 chr1A.!!$R2 722
2 TraesCS1A01G314400 chr1D 410464201 410469167 4966 True 3795.5 6994 91.90000 1 5013 2 chr1D.!!$R1 5012
3 TraesCS1A01G314400 chr1B 553016969 553022031 5062 True 1913.0 5234 90.78325 1 5013 4 chr1B.!!$R1 5012
4 TraesCS1A01G314400 chr6B 632883997 632885425 1428 False 1269.0 1269 83.00300 2857 4296 1 chr6B.!!$F1 1439
5 TraesCS1A01G314400 chr6D 163354003 163354726 723 True 1035.0 1035 92.58200 3118 3837 1 chr6D.!!$R1 719
6 TraesCS1A01G314400 chr6D 419888774 419890246 1472 False 639.5 719 83.08700 2860 4296 2 chr6D.!!$F1 1436
7 TraesCS1A01G314400 chr4D 447980729 447981375 646 True 933.0 933 92.74700 3193 3837 1 chr4D.!!$R1 644
8 TraesCS1A01G314400 chr6A 562940938 562942671 1733 False 592.5 739 84.21550 3409 4291 2 chr6A.!!$F1 882

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
648 720 0.233848 GTTTGGTTGACGCGGTACTG 59.766 55.000 12.47 0.00 0.00 2.74 F
1238 1360 0.464036 ATAGCATCTTCGGCCGTTCA 59.536 50.000 27.15 10.24 0.00 3.18 F
1268 1390 1.671054 CGATTGGTGGTGCGGAAGT 60.671 57.895 0.00 0.00 0.00 3.01 F
1795 1920 2.488153 GAGGAAACGGCTGCAAAGTTAT 59.512 45.455 0.50 0.00 0.00 1.89 F
2896 3024 0.241749 TGAAGTATCGTCACGCGGTT 59.758 50.000 12.47 0.00 41.72 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1737 1862 1.202830 AGGATGCGGTTGTGGTTAACA 60.203 47.619 8.1 0.0 36.85 2.41 R
2728 2855 1.372251 CAGCAGTGTTCTCGTCGCT 60.372 57.895 0.0 0.0 0.00 4.93 R
2896 3024 6.605471 TGTATCTTTCAAGGCTCTCTTACA 57.395 37.500 0.0 0.0 33.68 2.41 R
3723 3920 7.064253 ACGAATGGTAATTCAGTTTAGTAGCAC 59.936 37.037 0.0 0.0 42.08 4.40 R
4560 4849 0.038251 TGCATCCGTATCTCGCATCC 60.038 55.000 0.0 0.0 38.35 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
433 505 4.979943 TTGATTTCTGTTGTTCTGCACA 57.020 36.364 0.00 0.00 0.00 4.57
518 590 4.328983 TCTTAGAAATTCGGTCGTTGATGC 59.671 41.667 0.00 0.00 0.00 3.91
520 592 3.009723 AGAAATTCGGTCGTTGATGCAT 58.990 40.909 0.00 0.00 0.00 3.96
522 594 0.378257 ATTCGGTCGTTGATGCATGC 59.622 50.000 11.82 11.82 0.00 4.06
607 679 2.160721 ATGTCCATACCTCGTGTCCT 57.839 50.000 0.00 0.00 0.00 3.85
641 713 1.860078 CTCCTCGTTTGGTTGACGC 59.140 57.895 0.00 0.00 40.16 5.19
648 720 0.233848 GTTTGGTTGACGCGGTACTG 59.766 55.000 12.47 0.00 0.00 2.74
749 829 6.187682 CCAGTTAGAACCTGGAAAATATGGT 58.812 40.000 0.00 0.00 40.50 3.55
755 835 4.675063 ACCTGGAAAATATGGTTGGTCT 57.325 40.909 0.00 0.00 0.00 3.85
769 885 5.701224 TGGTTGGTCTCCATAAGTTTCTTT 58.299 37.500 0.00 0.00 31.53 2.52
800 916 6.183347 GCAAGATGGGCCTATAAGATGTTAT 58.817 40.000 0.00 0.29 33.25 1.89
963 1085 1.308998 AAAGTGACTTTGGCAGGTCG 58.691 50.000 10.18 0.00 31.98 4.79
969 1091 1.673920 GACTTTGGCAGGTCGAAACAA 59.326 47.619 6.87 0.00 0.00 2.83
983 1105 0.853530 AAACAACTTCCTGGAGGCCT 59.146 50.000 3.86 3.86 34.44 5.19
1238 1360 0.464036 ATAGCATCTTCGGCCGTTCA 59.536 50.000 27.15 10.24 0.00 3.18
1268 1390 1.671054 CGATTGGTGGTGCGGAAGT 60.671 57.895 0.00 0.00 0.00 3.01
1373 1495 6.014413 CCTCATGATGATCCATCTGAAGTAGT 60.014 42.308 0.00 0.00 41.06 2.73
1388 1510 5.227908 TGAAGTAGTTACGCTCCAAGAAAG 58.772 41.667 0.00 0.00 0.00 2.62
1499 1621 3.251004 ACACATTCTGAAGAGGAAAACGC 59.749 43.478 0.00 0.00 0.00 4.84
1795 1920 2.488153 GAGGAAACGGCTGCAAAGTTAT 59.512 45.455 0.50 0.00 0.00 1.89
2728 2855 6.765989 AGCAGCCGAACAAAATAATGATAGTA 59.234 34.615 0.00 0.00 0.00 1.82
2896 3024 0.241749 TGAAGTATCGTCACGCGGTT 59.758 50.000 12.47 0.00 41.72 4.44
2943 3071 3.326006 TGACAGAACAGCCTGAGAAGAAT 59.674 43.478 0.00 0.00 37.59 2.40
3370 3509 9.877178 CTCTGTATCTTGTTTAACTACCATTCT 57.123 33.333 0.00 0.00 0.00 2.40
3454 3595 4.326826 TGCTACAGTTCTATTTGCAAGCT 58.673 39.130 0.00 0.00 31.52 3.74
3455 3596 4.761739 TGCTACAGTTCTATTTGCAAGCTT 59.238 37.500 0.00 0.00 31.52 3.74
3456 3597 5.241506 TGCTACAGTTCTATTTGCAAGCTTT 59.758 36.000 0.00 0.00 31.52 3.51
3457 3598 5.797434 GCTACAGTTCTATTTGCAAGCTTTC 59.203 40.000 0.00 0.00 0.00 2.62
3458 3599 6.348868 GCTACAGTTCTATTTGCAAGCTTTCT 60.349 38.462 0.00 0.00 0.00 2.52
3459 3600 7.148407 GCTACAGTTCTATTTGCAAGCTTTCTA 60.148 37.037 0.00 0.00 0.00 2.10
3723 3920 3.122297 CAGAGAATCAGGCGCTAGAAAG 58.878 50.000 7.64 0.00 37.82 2.62
4391 4680 1.821136 CAAAGAAGGGGAGGATGTTGC 59.179 52.381 0.00 0.00 0.00 4.17
4392 4681 1.075601 AAGAAGGGGAGGATGTTGCA 58.924 50.000 0.00 0.00 0.00 4.08
4393 4682 0.622665 AGAAGGGGAGGATGTTGCAG 59.377 55.000 0.00 0.00 0.00 4.41
4542 4831 6.017523 TGTTCTATGTCGAACATTTTTGCTCA 60.018 34.615 2.53 0.00 45.92 4.26
4547 4836 1.001815 CGAACATTTTTGCTCACGGGT 60.002 47.619 0.00 0.00 0.00 5.28
4553 4842 1.975660 TTTTGCTCACGGGTTTAGCT 58.024 45.000 0.00 0.00 37.16 3.32
4560 4849 3.737355 GCTCACGGGTTTAGCTAGTTAGG 60.737 52.174 0.00 0.00 33.40 2.69
4593 4882 2.223735 CGGATGCAGATAGTACGGTTGT 60.224 50.000 0.00 0.00 0.00 3.32
4606 4895 4.923281 AGTACGGTTGTTACGTTGATTACC 59.077 41.667 0.00 0.00 42.70 2.85
4607 4896 3.357770 CGGTTGTTACGTTGATTACCG 57.642 47.619 12.30 12.30 40.68 4.02
4608 4897 2.730928 CGGTTGTTACGTTGATTACCGT 59.269 45.455 16.02 0.00 41.40 4.83
4612 4901 6.563010 CGGTTGTTACGTTGATTACCGTTTTA 60.563 38.462 16.02 0.00 41.40 1.52
4644 4933 4.307432 TGCAAGTTACTGCTGTACTCTTC 58.693 43.478 2.52 6.65 43.07 2.87
4668 4957 8.740123 TCAGTAGTGTTGGTTTTTCTATTTCA 57.260 30.769 0.00 0.00 0.00 2.69
4670 4960 9.398170 CAGTAGTGTTGGTTTTTCTATTTCATG 57.602 33.333 0.00 0.00 0.00 3.07
4846 5150 5.789643 AATGAATTGCCCGTAATATTGCT 57.210 34.783 0.00 0.00 0.00 3.91
4848 5152 4.930963 TGAATTGCCCGTAATATTGCTTG 58.069 39.130 0.00 0.00 0.00 4.01
4872 5176 6.934645 TGTTCTTACAGGGTCTCAAAATGTAG 59.065 38.462 0.00 0.00 0.00 2.74
4878 5184 5.780793 ACAGGGTCTCAAAATGTAGAGTACT 59.219 40.000 0.00 0.00 33.63 2.73
4897 5203 6.000219 AGTACTGATGAGCATTTCACTGTTT 59.000 36.000 0.00 0.00 38.99 2.83
4940 5249 3.573967 CAGCACAAAGTATCCAAAAGGGT 59.426 43.478 0.00 0.00 38.11 4.34
4952 5261 4.387598 TCCAAAAGGGTGAAATGCAAATG 58.612 39.130 0.00 0.00 38.11 2.32
4995 5305 3.619233 TCAGGCTTAGTTTTCGTTTGC 57.381 42.857 0.00 0.00 0.00 3.68
5007 5317 1.514003 TCGTTTGCCGAATTGCTACA 58.486 45.000 0.00 0.00 44.03 2.74
5013 5323 5.577835 GTTTGCCGAATTGCTACATTATGA 58.422 37.500 0.00 0.00 0.00 2.15
5014 5324 5.422666 TTGCCGAATTGCTACATTATGAG 57.577 39.130 0.00 0.00 0.00 2.90
5015 5325 3.250762 TGCCGAATTGCTACATTATGAGC 59.749 43.478 0.00 4.59 39.25 4.26
5016 5326 3.365364 GCCGAATTGCTACATTATGAGCC 60.365 47.826 0.00 0.00 37.94 4.70
5017 5327 4.067896 CCGAATTGCTACATTATGAGCCT 58.932 43.478 0.00 0.00 37.94 4.58
5018 5328 4.083643 CCGAATTGCTACATTATGAGCCTG 60.084 45.833 0.00 0.00 37.94 4.85
5019 5329 4.512944 CGAATTGCTACATTATGAGCCTGT 59.487 41.667 0.00 0.00 37.94 4.00
5020 5330 5.008019 CGAATTGCTACATTATGAGCCTGTT 59.992 40.000 0.00 0.02 37.94 3.16
5021 5331 6.382869 AATTGCTACATTATGAGCCTGTTC 57.617 37.500 0.00 0.00 37.94 3.18
5022 5332 3.457234 TGCTACATTATGAGCCTGTTCG 58.543 45.455 0.00 0.00 37.94 3.95
5023 5333 2.802816 GCTACATTATGAGCCTGTTCGG 59.197 50.000 0.00 0.00 32.25 4.30
5032 5342 3.590824 CCTGTTCGGCAACCATCC 58.409 61.111 0.00 0.00 0.00 3.51
5033 5343 1.303236 CCTGTTCGGCAACCATCCA 60.303 57.895 0.00 0.00 0.00 3.41
5034 5344 1.586154 CCTGTTCGGCAACCATCCAC 61.586 60.000 0.00 0.00 0.00 4.02
5035 5345 0.606401 CTGTTCGGCAACCATCCACT 60.606 55.000 0.00 0.00 0.00 4.00
5036 5346 0.605319 TGTTCGGCAACCATCCACTC 60.605 55.000 0.00 0.00 0.00 3.51
5037 5347 1.002624 TTCGGCAACCATCCACTCC 60.003 57.895 0.00 0.00 0.00 3.85
5038 5348 1.488705 TTCGGCAACCATCCACTCCT 61.489 55.000 0.00 0.00 0.00 3.69
5039 5349 1.450312 CGGCAACCATCCACTCCTC 60.450 63.158 0.00 0.00 0.00 3.71
5040 5350 1.903877 CGGCAACCATCCACTCCTCT 61.904 60.000 0.00 0.00 0.00 3.69
5041 5351 0.393537 GGCAACCATCCACTCCTCTG 60.394 60.000 0.00 0.00 0.00 3.35
5042 5352 0.615331 GCAACCATCCACTCCTCTGA 59.385 55.000 0.00 0.00 0.00 3.27
5043 5353 1.003580 GCAACCATCCACTCCTCTGAA 59.996 52.381 0.00 0.00 0.00 3.02
5044 5354 2.356535 GCAACCATCCACTCCTCTGAAT 60.357 50.000 0.00 0.00 0.00 2.57
5045 5355 3.875369 GCAACCATCCACTCCTCTGAATT 60.875 47.826 0.00 0.00 0.00 2.17
5046 5356 3.922171 ACCATCCACTCCTCTGAATTC 57.078 47.619 0.00 0.00 0.00 2.17
5047 5357 3.458831 ACCATCCACTCCTCTGAATTCT 58.541 45.455 7.05 0.00 0.00 2.40
5048 5358 3.454082 ACCATCCACTCCTCTGAATTCTC 59.546 47.826 7.05 0.00 0.00 2.87
5049 5359 3.453717 CCATCCACTCCTCTGAATTCTCA 59.546 47.826 7.05 0.00 0.00 3.27
5050 5360 4.080695 CCATCCACTCCTCTGAATTCTCAA 60.081 45.833 7.05 0.00 0.00 3.02
5051 5361 4.543590 TCCACTCCTCTGAATTCTCAAC 57.456 45.455 7.05 0.00 0.00 3.18
5052 5362 4.163427 TCCACTCCTCTGAATTCTCAACT 58.837 43.478 7.05 0.00 0.00 3.16
5053 5363 4.221703 TCCACTCCTCTGAATTCTCAACTC 59.778 45.833 7.05 0.00 0.00 3.01
5054 5364 4.502962 CACTCCTCTGAATTCTCAACTCC 58.497 47.826 7.05 0.00 0.00 3.85
5055 5365 4.020751 CACTCCTCTGAATTCTCAACTCCA 60.021 45.833 7.05 0.00 0.00 3.86
5056 5366 4.020662 ACTCCTCTGAATTCTCAACTCCAC 60.021 45.833 7.05 0.00 0.00 4.02
5057 5367 4.163427 TCCTCTGAATTCTCAACTCCACT 58.837 43.478 7.05 0.00 0.00 4.00
5058 5368 4.221703 TCCTCTGAATTCTCAACTCCACTC 59.778 45.833 7.05 0.00 0.00 3.51
5059 5369 4.502962 CTCTGAATTCTCAACTCCACTCC 58.497 47.826 7.05 0.00 0.00 3.85
5060 5370 4.163427 TCTGAATTCTCAACTCCACTCCT 58.837 43.478 7.05 0.00 0.00 3.69
5061 5371 4.221703 TCTGAATTCTCAACTCCACTCCTC 59.778 45.833 7.05 0.00 0.00 3.71
5062 5372 3.056536 TGAATTCTCAACTCCACTCCTCG 60.057 47.826 7.05 0.00 0.00 4.63
5063 5373 2.287977 TTCTCAACTCCACTCCTCGA 57.712 50.000 0.00 0.00 0.00 4.04
5064 5374 2.516227 TCTCAACTCCACTCCTCGAT 57.484 50.000 0.00 0.00 0.00 3.59
5065 5375 2.808919 TCTCAACTCCACTCCTCGATT 58.191 47.619 0.00 0.00 0.00 3.34
5066 5376 2.755655 TCTCAACTCCACTCCTCGATTC 59.244 50.000 0.00 0.00 0.00 2.52
5067 5377 1.825474 TCAACTCCACTCCTCGATTCC 59.175 52.381 0.00 0.00 0.00 3.01
5068 5378 1.134670 CAACTCCACTCCTCGATTCCC 60.135 57.143 0.00 0.00 0.00 3.97
5069 5379 0.041238 ACTCCACTCCTCGATTCCCA 59.959 55.000 0.00 0.00 0.00 4.37
5070 5380 1.195115 CTCCACTCCTCGATTCCCAA 58.805 55.000 0.00 0.00 0.00 4.12
5071 5381 0.902531 TCCACTCCTCGATTCCCAAC 59.097 55.000 0.00 0.00 0.00 3.77
5072 5382 0.905357 CCACTCCTCGATTCCCAACT 59.095 55.000 0.00 0.00 0.00 3.16
5073 5383 1.134670 CCACTCCTCGATTCCCAACTC 60.135 57.143 0.00 0.00 0.00 3.01
5074 5384 1.134670 CACTCCTCGATTCCCAACTCC 60.135 57.143 0.00 0.00 0.00 3.85
5075 5385 0.466124 CTCCTCGATTCCCAACTCCC 59.534 60.000 0.00 0.00 0.00 4.30
5076 5386 0.252513 TCCTCGATTCCCAACTCCCA 60.253 55.000 0.00 0.00 0.00 4.37
5077 5387 0.179000 CCTCGATTCCCAACTCCCAG 59.821 60.000 0.00 0.00 0.00 4.45
5078 5388 0.462759 CTCGATTCCCAACTCCCAGC 60.463 60.000 0.00 0.00 0.00 4.85
5079 5389 0.909610 TCGATTCCCAACTCCCAGCT 60.910 55.000 0.00 0.00 0.00 4.24
5080 5390 0.462759 CGATTCCCAACTCCCAGCTC 60.463 60.000 0.00 0.00 0.00 4.09
5081 5391 0.106967 GATTCCCAACTCCCAGCTCC 60.107 60.000 0.00 0.00 0.00 4.70
5082 5392 0.846427 ATTCCCAACTCCCAGCTCCA 60.846 55.000 0.00 0.00 0.00 3.86
5083 5393 0.846427 TTCCCAACTCCCAGCTCCAT 60.846 55.000 0.00 0.00 0.00 3.41
5084 5394 0.846427 TCCCAACTCCCAGCTCCATT 60.846 55.000 0.00 0.00 0.00 3.16
5085 5395 0.918983 CCCAACTCCCAGCTCCATTA 59.081 55.000 0.00 0.00 0.00 1.90
5086 5396 1.133976 CCCAACTCCCAGCTCCATTAG 60.134 57.143 0.00 0.00 0.00 1.73
5118 5428 3.353600 TGGCAACATGTTCGGCAG 58.646 55.556 23.49 9.88 46.17 4.85
5119 5429 2.126346 GGCAACATGTTCGGCAGC 60.126 61.111 19.16 14.27 0.00 5.25
5120 5430 2.126346 GCAACATGTTCGGCAGCC 60.126 61.111 8.48 0.00 0.00 4.85
5121 5431 2.918345 GCAACATGTTCGGCAGCCA 61.918 57.895 13.30 0.00 0.00 4.75
5122 5432 1.659233 CAACATGTTCGGCAGCCAA 59.341 52.632 13.30 1.97 0.00 4.52
5123 5433 0.664166 CAACATGTTCGGCAGCCAAC 60.664 55.000 13.30 14.95 0.00 3.77
5124 5434 0.823356 AACATGTTCGGCAGCCAACT 60.823 50.000 20.67 9.20 0.00 3.16
5125 5435 1.237285 ACATGTTCGGCAGCCAACTC 61.237 55.000 20.67 7.01 0.00 3.01
5126 5436 1.675641 ATGTTCGGCAGCCAACTCC 60.676 57.895 20.67 3.34 0.00 3.85
5127 5437 2.281484 GTTCGGCAGCCAACTCCA 60.281 61.111 13.30 0.00 0.00 3.86
5128 5438 1.896660 GTTCGGCAGCCAACTCCAA 60.897 57.895 13.30 0.00 0.00 3.53
5129 5439 1.896660 TTCGGCAGCCAACTCCAAC 60.897 57.895 13.30 0.00 0.00 3.77
5130 5440 2.281761 CGGCAGCCAACTCCAACT 60.282 61.111 13.30 0.00 0.00 3.16
5131 5441 2.328099 CGGCAGCCAACTCCAACTC 61.328 63.158 13.30 0.00 0.00 3.01
5132 5442 1.973812 GGCAGCCAACTCCAACTCC 60.974 63.158 6.55 0.00 0.00 3.85
5133 5443 1.073897 GCAGCCAACTCCAACTCCT 59.926 57.895 0.00 0.00 0.00 3.69
5134 5444 0.957888 GCAGCCAACTCCAACTCCTC 60.958 60.000 0.00 0.00 0.00 3.71
5135 5445 0.397941 CAGCCAACTCCAACTCCTCA 59.602 55.000 0.00 0.00 0.00 3.86
5136 5446 0.398318 AGCCAACTCCAACTCCTCAC 59.602 55.000 0.00 0.00 0.00 3.51
5137 5447 0.606673 GCCAACTCCAACTCCTCACC 60.607 60.000 0.00 0.00 0.00 4.02
5138 5448 1.059913 CCAACTCCAACTCCTCACCT 58.940 55.000 0.00 0.00 0.00 4.00
5139 5449 1.271054 CCAACTCCAACTCCTCACCTG 60.271 57.143 0.00 0.00 0.00 4.00
5140 5450 1.417890 CAACTCCAACTCCTCACCTGT 59.582 52.381 0.00 0.00 0.00 4.00
5141 5451 2.632996 CAACTCCAACTCCTCACCTGTA 59.367 50.000 0.00 0.00 0.00 2.74
5142 5452 3.191888 ACTCCAACTCCTCACCTGTAT 57.808 47.619 0.00 0.00 0.00 2.29
5143 5453 3.521727 ACTCCAACTCCTCACCTGTATT 58.478 45.455 0.00 0.00 0.00 1.89
5144 5454 3.910627 ACTCCAACTCCTCACCTGTATTT 59.089 43.478 0.00 0.00 0.00 1.40
5145 5455 4.351111 ACTCCAACTCCTCACCTGTATTTT 59.649 41.667 0.00 0.00 0.00 1.82
5146 5456 4.906618 TCCAACTCCTCACCTGTATTTTC 58.093 43.478 0.00 0.00 0.00 2.29
5147 5457 4.597507 TCCAACTCCTCACCTGTATTTTCT 59.402 41.667 0.00 0.00 0.00 2.52
5148 5458 5.783360 TCCAACTCCTCACCTGTATTTTCTA 59.217 40.000 0.00 0.00 0.00 2.10
5149 5459 6.443849 TCCAACTCCTCACCTGTATTTTCTAT 59.556 38.462 0.00 0.00 0.00 1.98
5150 5460 7.037586 TCCAACTCCTCACCTGTATTTTCTATT 60.038 37.037 0.00 0.00 0.00 1.73
5151 5461 7.066284 CCAACTCCTCACCTGTATTTTCTATTG 59.934 40.741 0.00 0.00 0.00 1.90
5152 5462 7.496346 ACTCCTCACCTGTATTTTCTATTGA 57.504 36.000 0.00 0.00 0.00 2.57
5153 5463 7.918076 ACTCCTCACCTGTATTTTCTATTGAA 58.082 34.615 0.00 0.00 0.00 2.69
5154 5464 8.043710 ACTCCTCACCTGTATTTTCTATTGAAG 58.956 37.037 0.00 0.00 33.28 3.02
5155 5465 7.338710 TCCTCACCTGTATTTTCTATTGAAGG 58.661 38.462 0.00 0.00 33.28 3.46
5156 5466 7.182026 TCCTCACCTGTATTTTCTATTGAAGGA 59.818 37.037 0.00 0.00 33.28 3.36
5157 5467 7.829211 CCTCACCTGTATTTTCTATTGAAGGAA 59.171 37.037 0.00 0.00 33.28 3.36
5158 5468 8.561738 TCACCTGTATTTTCTATTGAAGGAAC 57.438 34.615 0.00 0.00 33.28 3.62
5159 5469 7.610305 TCACCTGTATTTTCTATTGAAGGAACC 59.390 37.037 0.00 0.00 33.28 3.62
5160 5470 6.598064 ACCTGTATTTTCTATTGAAGGAACCG 59.402 38.462 0.00 0.00 33.28 4.44
5161 5471 6.038271 CCTGTATTTTCTATTGAAGGAACCGG 59.962 42.308 0.00 0.00 33.28 5.28
5162 5472 4.983671 ATTTTCTATTGAAGGAACCGGC 57.016 40.909 0.00 0.00 33.28 6.13
5163 5473 3.426787 TTTCTATTGAAGGAACCGGCA 57.573 42.857 0.00 0.00 33.28 5.69
5164 5474 2.691409 TCTATTGAAGGAACCGGCAG 57.309 50.000 0.00 0.00 0.00 4.85
5165 5475 1.209504 TCTATTGAAGGAACCGGCAGG 59.790 52.381 0.00 0.00 45.13 4.85
5166 5476 1.209504 CTATTGAAGGAACCGGCAGGA 59.790 52.381 10.86 0.00 41.02 3.86
5167 5477 0.035056 ATTGAAGGAACCGGCAGGAG 60.035 55.000 10.86 0.00 41.02 3.69
5168 5478 1.415672 TTGAAGGAACCGGCAGGAGT 61.416 55.000 10.86 0.00 41.02 3.85
5169 5479 1.375326 GAAGGAACCGGCAGGAGTT 59.625 57.895 10.86 0.00 41.02 3.01
5170 5480 0.611714 GAAGGAACCGGCAGGAGTTA 59.388 55.000 10.86 0.00 41.02 2.24
5171 5481 1.002773 GAAGGAACCGGCAGGAGTTAA 59.997 52.381 10.86 0.00 41.02 2.01
5172 5482 1.061546 AGGAACCGGCAGGAGTTAAA 58.938 50.000 10.86 0.00 41.02 1.52
5173 5483 1.003233 AGGAACCGGCAGGAGTTAAAG 59.997 52.381 10.86 0.00 41.02 1.85
5174 5484 1.271217 GGAACCGGCAGGAGTTAAAGT 60.271 52.381 10.86 0.00 41.02 2.66
5175 5485 1.804748 GAACCGGCAGGAGTTAAAGTG 59.195 52.381 10.86 0.00 41.02 3.16
5176 5486 1.053424 ACCGGCAGGAGTTAAAGTGA 58.947 50.000 10.86 0.00 41.02 3.41
5177 5487 1.002087 ACCGGCAGGAGTTAAAGTGAG 59.998 52.381 10.86 0.00 41.02 3.51
5178 5488 1.275291 CCGGCAGGAGTTAAAGTGAGA 59.725 52.381 0.00 0.00 41.02 3.27
5179 5489 2.611518 CGGCAGGAGTTAAAGTGAGAG 58.388 52.381 0.00 0.00 0.00 3.20
5180 5490 2.028930 CGGCAGGAGTTAAAGTGAGAGT 60.029 50.000 0.00 0.00 0.00 3.24
5181 5491 3.591023 GGCAGGAGTTAAAGTGAGAGTC 58.409 50.000 0.00 0.00 0.00 3.36
5182 5492 3.246619 GCAGGAGTTAAAGTGAGAGTCG 58.753 50.000 0.00 0.00 0.00 4.18
5183 5493 3.305471 GCAGGAGTTAAAGTGAGAGTCGT 60.305 47.826 0.00 0.00 0.00 4.34
5184 5494 4.477780 CAGGAGTTAAAGTGAGAGTCGTC 58.522 47.826 0.00 0.00 0.00 4.20
5185 5495 3.506844 AGGAGTTAAAGTGAGAGTCGTCC 59.493 47.826 0.00 0.00 0.00 4.79
5186 5496 3.490399 GAGTTAAAGTGAGAGTCGTCCG 58.510 50.000 0.00 0.00 0.00 4.79
5187 5497 2.883386 AGTTAAAGTGAGAGTCGTCCGT 59.117 45.455 0.00 0.00 0.00 4.69
5188 5498 3.058363 AGTTAAAGTGAGAGTCGTCCGTC 60.058 47.826 0.00 0.00 0.00 4.79
5189 5499 1.315690 AAAGTGAGAGTCGTCCGTCA 58.684 50.000 0.00 0.00 0.00 4.35
5190 5500 0.875728 AAGTGAGAGTCGTCCGTCAG 59.124 55.000 0.00 0.00 0.00 3.51
5191 5501 0.250381 AGTGAGAGTCGTCCGTCAGT 60.250 55.000 0.00 0.00 0.00 3.41
5192 5502 0.110147 GTGAGAGTCGTCCGTCAGTG 60.110 60.000 0.00 0.00 0.00 3.66
5193 5503 0.534427 TGAGAGTCGTCCGTCAGTGT 60.534 55.000 0.00 0.00 0.00 3.55
5194 5504 0.110147 GAGAGTCGTCCGTCAGTGTG 60.110 60.000 0.00 0.00 0.00 3.82
5195 5505 1.729838 GAGTCGTCCGTCAGTGTGC 60.730 63.158 0.00 0.00 0.00 4.57
5196 5506 2.131294 GAGTCGTCCGTCAGTGTGCT 62.131 60.000 0.00 0.00 0.00 4.40
5197 5507 2.016704 GTCGTCCGTCAGTGTGCTG 61.017 63.158 0.00 0.00 43.87 4.41
5198 5508 2.027605 CGTCCGTCAGTGTGCTGT 59.972 61.111 0.00 0.00 43.05 4.40
5199 5509 1.591594 CGTCCGTCAGTGTGCTGTT 60.592 57.895 0.00 0.00 43.05 3.16
5200 5510 1.821241 CGTCCGTCAGTGTGCTGTTG 61.821 60.000 0.00 0.00 43.05 3.33
5201 5511 1.227527 TCCGTCAGTGTGCTGTTGG 60.228 57.895 0.00 0.00 43.05 3.77
5202 5512 2.253758 CCGTCAGTGTGCTGTTGGG 61.254 63.158 0.00 0.00 43.05 4.12
5203 5513 1.523711 CGTCAGTGTGCTGTTGGGT 60.524 57.895 0.00 0.00 43.05 4.51
5204 5514 1.095228 CGTCAGTGTGCTGTTGGGTT 61.095 55.000 0.00 0.00 43.05 4.11
5205 5515 0.381801 GTCAGTGTGCTGTTGGGTTG 59.618 55.000 0.00 0.00 43.05 3.77
5206 5516 0.034574 TCAGTGTGCTGTTGGGTTGT 60.035 50.000 0.00 0.00 43.05 3.32
5207 5517 0.381801 CAGTGTGCTGTTGGGTTGTC 59.618 55.000 0.00 0.00 37.92 3.18
5208 5518 1.095228 AGTGTGCTGTTGGGTTGTCG 61.095 55.000 0.00 0.00 0.00 4.35
5209 5519 1.092921 GTGTGCTGTTGGGTTGTCGA 61.093 55.000 0.00 0.00 0.00 4.20
5210 5520 0.393132 TGTGCTGTTGGGTTGTCGAA 60.393 50.000 0.00 0.00 0.00 3.71
5211 5521 0.028902 GTGCTGTTGGGTTGTCGAAC 59.971 55.000 0.00 0.00 35.10 3.95
5219 5529 3.593834 GGTTGTCGAACCGGTAAGT 57.406 52.632 8.00 0.00 42.47 2.24
5220 5530 1.869774 GGTTGTCGAACCGGTAAGTT 58.130 50.000 8.00 0.00 42.47 2.66
5221 5531 1.528161 GGTTGTCGAACCGGTAAGTTG 59.472 52.381 8.00 0.00 42.47 3.16
5222 5532 2.204237 GTTGTCGAACCGGTAAGTTGT 58.796 47.619 8.00 0.00 0.00 3.32
5223 5533 1.855513 TGTCGAACCGGTAAGTTGTG 58.144 50.000 8.00 0.00 0.00 3.33
5224 5534 1.142474 GTCGAACCGGTAAGTTGTGG 58.858 55.000 8.00 0.00 0.00 4.17
5225 5535 0.600782 TCGAACCGGTAAGTTGTGGC 60.601 55.000 8.00 0.00 0.00 5.01
5226 5536 0.881159 CGAACCGGTAAGTTGTGGCA 60.881 55.000 8.00 0.00 0.00 4.92
5227 5537 1.310904 GAACCGGTAAGTTGTGGCAA 58.689 50.000 8.00 0.00 0.00 4.52
5228 5538 1.677052 GAACCGGTAAGTTGTGGCAAA 59.323 47.619 8.00 0.00 0.00 3.68
5229 5539 1.314730 ACCGGTAAGTTGTGGCAAAG 58.685 50.000 4.49 0.00 0.00 2.77
5230 5540 0.596082 CCGGTAAGTTGTGGCAAAGG 59.404 55.000 0.00 0.00 0.00 3.11
5231 5541 1.314730 CGGTAAGTTGTGGCAAAGGT 58.685 50.000 0.00 0.00 0.00 3.50
5232 5542 1.001815 CGGTAAGTTGTGGCAAAGGTG 60.002 52.381 0.00 0.00 0.00 4.00
5233 5543 1.339929 GGTAAGTTGTGGCAAAGGTGG 59.660 52.381 0.00 0.00 0.00 4.61
5234 5544 1.339929 GTAAGTTGTGGCAAAGGTGGG 59.660 52.381 0.00 0.00 0.00 4.61
5235 5545 0.325203 AAGTTGTGGCAAAGGTGGGT 60.325 50.000 0.00 0.00 0.00 4.51
5236 5546 0.553819 AGTTGTGGCAAAGGTGGGTA 59.446 50.000 0.00 0.00 0.00 3.69
5237 5547 0.958822 GTTGTGGCAAAGGTGGGTAG 59.041 55.000 0.00 0.00 0.00 3.18
5238 5548 0.847373 TTGTGGCAAAGGTGGGTAGA 59.153 50.000 0.00 0.00 0.00 2.59
5239 5549 0.847373 TGTGGCAAAGGTGGGTAGAA 59.153 50.000 0.00 0.00 0.00 2.10
5240 5550 1.215673 TGTGGCAAAGGTGGGTAGAAA 59.784 47.619 0.00 0.00 0.00 2.52
5241 5551 2.312390 GTGGCAAAGGTGGGTAGAAAA 58.688 47.619 0.00 0.00 0.00 2.29
5242 5552 2.035449 GTGGCAAAGGTGGGTAGAAAAC 59.965 50.000 0.00 0.00 0.00 2.43
5243 5553 2.091555 TGGCAAAGGTGGGTAGAAAACT 60.092 45.455 0.00 0.00 0.00 2.66
5244 5554 2.963101 GGCAAAGGTGGGTAGAAAACTT 59.037 45.455 0.00 0.00 0.00 2.66
5245 5555 3.386726 GGCAAAGGTGGGTAGAAAACTTT 59.613 43.478 0.00 0.00 0.00 2.66
5246 5556 4.368315 GCAAAGGTGGGTAGAAAACTTTG 58.632 43.478 8.47 8.47 44.44 2.77
5247 5557 4.098807 GCAAAGGTGGGTAGAAAACTTTGA 59.901 41.667 15.40 0.00 44.41 2.69
5248 5558 5.394773 GCAAAGGTGGGTAGAAAACTTTGAA 60.395 40.000 15.40 0.00 44.41 2.69
5249 5559 5.847111 AAGGTGGGTAGAAAACTTTGAAC 57.153 39.130 0.00 0.00 0.00 3.18
5250 5560 5.125367 AGGTGGGTAGAAAACTTTGAACT 57.875 39.130 0.00 0.00 0.00 3.01
5251 5561 5.131067 AGGTGGGTAGAAAACTTTGAACTC 58.869 41.667 0.00 0.00 0.00 3.01
5252 5562 4.277672 GGTGGGTAGAAAACTTTGAACTCC 59.722 45.833 0.00 0.00 0.00 3.85
5253 5563 4.885325 GTGGGTAGAAAACTTTGAACTCCA 59.115 41.667 0.00 0.00 0.00 3.86
5254 5564 5.008712 GTGGGTAGAAAACTTTGAACTCCAG 59.991 44.000 0.00 0.00 0.00 3.86
5255 5565 4.519350 GGGTAGAAAACTTTGAACTCCAGG 59.481 45.833 0.00 0.00 0.00 4.45
5256 5566 4.519350 GGTAGAAAACTTTGAACTCCAGGG 59.481 45.833 0.00 0.00 0.00 4.45
5257 5567 4.519906 AGAAAACTTTGAACTCCAGGGA 57.480 40.909 0.00 0.00 0.00 4.20
5258 5568 4.207955 AGAAAACTTTGAACTCCAGGGAC 58.792 43.478 0.00 0.00 0.00 4.46
5259 5569 3.662759 AAACTTTGAACTCCAGGGACA 57.337 42.857 0.00 0.00 0.00 4.02
5260 5570 3.662759 AACTTTGAACTCCAGGGACAA 57.337 42.857 0.00 0.00 0.00 3.18
5261 5571 3.884037 ACTTTGAACTCCAGGGACAAT 57.116 42.857 0.00 0.00 0.00 2.71
5262 5572 3.756117 ACTTTGAACTCCAGGGACAATC 58.244 45.455 0.00 0.00 0.00 2.67
5263 5573 3.395941 ACTTTGAACTCCAGGGACAATCT 59.604 43.478 0.00 0.00 0.00 2.40
5264 5574 3.703001 TTGAACTCCAGGGACAATCTC 57.297 47.619 0.00 0.00 0.00 2.75
5265 5575 1.550524 TGAACTCCAGGGACAATCTCG 59.449 52.381 0.00 0.00 0.00 4.04
5266 5576 1.550976 GAACTCCAGGGACAATCTCGT 59.449 52.381 0.00 0.00 0.00 4.18
5267 5577 2.526888 ACTCCAGGGACAATCTCGTA 57.473 50.000 0.00 0.00 0.00 3.43
5268 5578 2.100989 ACTCCAGGGACAATCTCGTAC 58.899 52.381 0.00 0.00 0.00 3.67
5269 5579 2.100197 CTCCAGGGACAATCTCGTACA 58.900 52.381 0.00 0.00 0.00 2.90
5270 5580 2.099921 CTCCAGGGACAATCTCGTACAG 59.900 54.545 0.00 0.00 0.00 2.74
5271 5581 1.825474 CCAGGGACAATCTCGTACAGT 59.175 52.381 0.00 0.00 0.00 3.55
5272 5582 2.417379 CCAGGGACAATCTCGTACAGTG 60.417 54.545 0.00 0.00 0.00 3.66
5273 5583 2.492088 CAGGGACAATCTCGTACAGTGA 59.508 50.000 0.00 0.00 0.00 3.41
5274 5584 2.755655 AGGGACAATCTCGTACAGTGAG 59.244 50.000 0.00 0.00 34.72 3.51
5275 5585 2.753452 GGGACAATCTCGTACAGTGAGA 59.247 50.000 0.00 2.03 45.84 3.27
5276 5586 3.427773 GGGACAATCTCGTACAGTGAGAC 60.428 52.174 0.00 0.00 44.69 3.36
5277 5587 3.190744 GGACAATCTCGTACAGTGAGACA 59.809 47.826 0.00 0.00 44.69 3.41
5278 5588 4.142359 GGACAATCTCGTACAGTGAGACAT 60.142 45.833 0.00 0.00 44.69 3.06
5279 5589 4.738124 ACAATCTCGTACAGTGAGACATG 58.262 43.478 0.00 6.69 44.69 3.21
5280 5590 2.921634 TCTCGTACAGTGAGACATGC 57.078 50.000 0.00 0.00 37.55 4.06
5281 5591 1.130561 TCTCGTACAGTGAGACATGCG 59.869 52.381 0.00 0.00 37.55 4.73
5282 5592 0.170339 TCGTACAGTGAGACATGCGG 59.830 55.000 0.00 0.00 0.00 5.69
5283 5593 0.170339 CGTACAGTGAGACATGCGGA 59.830 55.000 0.00 0.00 0.00 5.54
5284 5594 1.795525 CGTACAGTGAGACATGCGGAG 60.796 57.143 0.00 0.00 0.00 4.63
5312 5622 4.203618 GCCACTTTAGCGACTCCC 57.796 61.111 0.00 0.00 0.00 4.30
5313 5623 1.295423 GCCACTTTAGCGACTCCCA 59.705 57.895 0.00 0.00 0.00 4.37
5314 5624 0.741221 GCCACTTTAGCGACTCCCAG 60.741 60.000 0.00 0.00 0.00 4.45
5315 5625 0.895530 CCACTTTAGCGACTCCCAGA 59.104 55.000 0.00 0.00 0.00 3.86
5316 5626 1.275291 CCACTTTAGCGACTCCCAGAA 59.725 52.381 0.00 0.00 0.00 3.02
5317 5627 2.289444 CCACTTTAGCGACTCCCAGAAA 60.289 50.000 0.00 0.00 0.00 2.52
5318 5628 3.399330 CACTTTAGCGACTCCCAGAAAA 58.601 45.455 0.00 0.00 0.00 2.29
5319 5629 4.003648 CACTTTAGCGACTCCCAGAAAAT 58.996 43.478 0.00 0.00 0.00 1.82
5320 5630 4.003648 ACTTTAGCGACTCCCAGAAAATG 58.996 43.478 0.00 0.00 0.00 2.32
5331 5641 2.369394 CCAGAAAATGGTCTACTGGCC 58.631 52.381 0.00 0.00 44.91 5.36
5332 5642 2.290896 CCAGAAAATGGTCTACTGGCCA 60.291 50.000 4.71 4.71 44.91 5.36
5333 5643 2.749621 CAGAAAATGGTCTACTGGCCAC 59.250 50.000 0.00 0.00 37.62 5.01
5334 5644 2.644798 AGAAAATGGTCTACTGGCCACT 59.355 45.455 0.00 0.00 37.62 4.00
5335 5645 2.789409 AAATGGTCTACTGGCCACTC 57.211 50.000 0.00 0.00 37.62 3.51
5336 5646 0.912486 AATGGTCTACTGGCCACTCC 59.088 55.000 0.00 0.29 37.62 3.85
5337 5647 1.330655 ATGGTCTACTGGCCACTCCG 61.331 60.000 0.00 0.00 37.62 4.63
5338 5648 2.184579 GTCTACTGGCCACTCCGC 59.815 66.667 0.00 0.00 37.80 5.54
5339 5649 2.037367 TCTACTGGCCACTCCGCT 59.963 61.111 0.00 0.00 37.80 5.52
5340 5650 2.052690 TCTACTGGCCACTCCGCTC 61.053 63.158 0.00 0.00 37.80 5.03
5341 5651 3.075005 TACTGGCCACTCCGCTCC 61.075 66.667 0.00 0.00 37.80 4.70
5363 5673 4.823276 CGAGGAAATCGCTGAGCT 57.177 55.556 1.78 0.00 45.98 4.09
5364 5674 2.295692 CGAGGAAATCGCTGAGCTG 58.704 57.895 1.78 0.00 45.98 4.24
5365 5675 0.179127 CGAGGAAATCGCTGAGCTGA 60.179 55.000 1.78 1.84 45.98 4.26
5366 5676 1.537776 CGAGGAAATCGCTGAGCTGAT 60.538 52.381 1.78 4.39 45.98 2.90
5367 5677 2.134346 GAGGAAATCGCTGAGCTGATC 58.866 52.381 1.78 0.00 0.00 2.92
5368 5678 1.761784 AGGAAATCGCTGAGCTGATCT 59.238 47.619 1.78 0.00 0.00 2.75
5369 5679 1.865970 GGAAATCGCTGAGCTGATCTG 59.134 52.381 1.78 0.00 0.00 2.90
5370 5680 2.548875 GAAATCGCTGAGCTGATCTGT 58.451 47.619 1.78 0.00 0.00 3.41
5371 5681 2.687700 AATCGCTGAGCTGATCTGTT 57.312 45.000 1.78 0.00 0.00 3.16
5372 5682 2.222007 ATCGCTGAGCTGATCTGTTC 57.778 50.000 1.78 9.13 0.00 3.18
5373 5683 0.179153 TCGCTGAGCTGATCTGTTCG 60.179 55.000 1.78 7.59 0.00 3.95
5374 5684 1.144565 CGCTGAGCTGATCTGTTCGG 61.145 60.000 17.44 17.44 0.00 4.30
5375 5685 0.108424 GCTGAGCTGATCTGTTCGGT 60.108 55.000 20.95 0.45 32.85 4.69
5376 5686 1.638133 CTGAGCTGATCTGTTCGGTG 58.362 55.000 14.61 4.15 32.85 4.94
5377 5687 0.390340 TGAGCTGATCTGTTCGGTGC 60.390 55.000 10.94 0.00 32.85 5.01
5378 5688 1.078848 AGCTGATCTGTTCGGTGCC 60.079 57.895 1.27 0.00 32.85 5.01
5379 5689 2.456119 GCTGATCTGTTCGGTGCCG 61.456 63.158 3.94 3.94 41.35 5.69
5380 5690 2.434185 TGATCTGTTCGGTGCCGC 60.434 61.111 5.64 0.00 39.59 6.53
5381 5691 2.125512 GATCTGTTCGGTGCCGCT 60.126 61.111 5.64 0.00 39.59 5.52
5382 5692 2.125512 ATCTGTTCGGTGCCGCTC 60.126 61.111 5.64 2.24 39.59 5.03
5383 5693 3.665675 ATCTGTTCGGTGCCGCTCC 62.666 63.158 5.64 1.07 39.59 4.70
5384 5694 4.379243 CTGTTCGGTGCCGCTCCT 62.379 66.667 9.70 0.00 39.59 3.69
5385 5695 4.680237 TGTTCGGTGCCGCTCCTG 62.680 66.667 9.70 3.91 39.59 3.86
5394 5704 4.834453 CCGCTCCTGCTGCTCCAG 62.834 72.222 0.00 0.00 36.97 3.86
5406 5716 3.710926 CTCCAGGAGCAGAGCTGT 58.289 61.111 2.60 0.00 39.88 4.40
5407 5717 1.218585 CTCCAGGAGCAGAGCTGTG 59.781 63.158 6.48 6.48 39.88 3.66
5408 5718 2.241479 CTCCAGGAGCAGAGCTGTGG 62.241 65.000 13.44 9.64 39.88 4.17
5409 5719 2.288778 CCAGGAGCAGAGCTGTGGA 61.289 63.158 13.44 0.00 40.10 4.02
5410 5720 1.218585 CAGGAGCAGAGCTGTGGAG 59.781 63.158 13.44 0.00 39.88 3.86
5411 5721 1.229145 AGGAGCAGAGCTGTGGAGT 60.229 57.895 13.44 0.00 39.88 3.85
5412 5722 1.079266 GGAGCAGAGCTGTGGAGTG 60.079 63.158 13.44 0.00 39.88 3.51
5413 5723 1.079266 GAGCAGAGCTGTGGAGTGG 60.079 63.158 13.44 0.00 39.88 4.00
5414 5724 1.534959 AGCAGAGCTGTGGAGTGGA 60.535 57.895 13.44 0.00 37.57 4.02
5415 5725 1.079266 GCAGAGCTGTGGAGTGGAG 60.079 63.158 13.44 0.00 0.00 3.86
5416 5726 1.595882 CAGAGCTGTGGAGTGGAGG 59.404 63.158 2.14 0.00 0.00 4.30
5417 5727 1.611851 AGAGCTGTGGAGTGGAGGG 60.612 63.158 0.00 0.00 0.00 4.30
5418 5728 3.322318 GAGCTGTGGAGTGGAGGGC 62.322 68.421 0.00 0.00 0.00 5.19
5419 5729 3.325753 GCTGTGGAGTGGAGGGCT 61.326 66.667 0.00 0.00 0.00 5.19
5420 5730 2.985456 CTGTGGAGTGGAGGGCTC 59.015 66.667 0.00 0.00 0.00 4.70
5429 5739 3.787001 GGAGGGCTCCCGAACAGG 61.787 72.222 0.00 0.00 43.94 4.00
5430 5740 4.475135 GAGGGCTCCCGAACAGGC 62.475 72.222 0.00 0.00 41.95 4.85
5434 5744 3.081409 GCTCCCGAACAGGCCCTA 61.081 66.667 0.00 0.00 39.21 3.53
5435 5745 2.444256 GCTCCCGAACAGGCCCTAT 61.444 63.158 0.00 0.00 39.21 2.57
5436 5746 1.447643 CTCCCGAACAGGCCCTATG 59.552 63.158 0.00 0.00 39.21 2.23
5437 5747 1.306654 TCCCGAACAGGCCCTATGT 60.307 57.895 0.00 0.00 39.21 2.29
5438 5748 0.912487 TCCCGAACAGGCCCTATGTT 60.912 55.000 8.50 8.50 43.38 2.71
5439 5749 0.748005 CCCGAACAGGCCCTATGTTG 60.748 60.000 13.17 0.00 40.86 3.33
5440 5750 0.251916 CCGAACAGGCCCTATGTTGA 59.748 55.000 13.17 0.00 40.86 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
433 505 2.297701 AGACAACACGCCAAACATTCT 58.702 42.857 0.00 0.00 0.00 2.40
522 594 5.947228 TTAGTTCACAAGAAAGCATCAGG 57.053 39.130 0.00 0.00 35.08 3.86
641 713 1.069227 GCACAAGAAAAGGCAGTACCG 60.069 52.381 0.00 0.00 46.52 4.02
749 829 5.596361 TGCAAAAGAAACTTATGGAGACCAA 59.404 36.000 0.00 0.00 36.95 3.67
755 835 3.305064 GCCGTGCAAAAGAAACTTATGGA 60.305 43.478 0.00 0.00 0.00 3.41
769 885 3.372730 GCCCATCTTGCCGTGCAA 61.373 61.111 10.28 10.28 46.80 4.08
780 896 5.440610 CCCATAACATCTTATAGGCCCATC 58.559 45.833 0.00 0.00 0.00 3.51
785 901 3.267031 AGGCCCCATAACATCTTATAGGC 59.733 47.826 0.00 5.75 38.82 3.93
787 903 7.496346 TCTAAGGCCCCATAACATCTTATAG 57.504 40.000 0.00 0.00 0.00 1.31
788 904 7.881912 TTCTAAGGCCCCATAACATCTTATA 57.118 36.000 0.00 0.00 0.00 0.98
800 916 3.361786 GCACTATTTTTCTAAGGCCCCA 58.638 45.455 0.00 0.00 0.00 4.96
906 1022 3.612371 GACAGCAGCAGCAGCAAGC 62.612 63.158 12.92 7.16 45.49 4.01
963 1085 1.202940 AGGCCTCCAGGAAGTTGTTTC 60.203 52.381 0.00 0.00 37.39 2.78
969 1091 0.695347 CTTTGAGGCCTCCAGGAAGT 59.305 55.000 29.95 0.00 37.39 3.01
983 1105 1.501170 TCATGTCCAAACCCCCTTTGA 59.499 47.619 0.00 0.00 41.81 2.69
1238 1360 3.244770 ACCACCAATCGTTTCACTACCAT 60.245 43.478 0.00 0.00 0.00 3.55
1268 1390 3.158676 GTGTAAATAGTGCCCCCACAAA 58.841 45.455 0.00 0.00 44.53 2.83
1388 1510 3.153919 TGGGTATCTGAAACAACCAAGC 58.846 45.455 0.00 0.00 33.46 4.01
1499 1621 7.116805 CCTTAATTTTTAGCTTGGACTTTGCAG 59.883 37.037 0.00 0.00 0.00 4.41
1737 1862 1.202830 AGGATGCGGTTGTGGTTAACA 60.203 47.619 8.10 0.00 36.85 2.41
1795 1920 4.898861 AGGTTTTCTTTGTGATTTAGGGCA 59.101 37.500 0.00 0.00 0.00 5.36
2262 2389 5.473066 AATGTTACTGATTTGCCTTTGCT 57.527 34.783 0.00 0.00 38.71 3.91
2434 2561 3.141767 GGACTTACCTTTTGAGGTGCT 57.858 47.619 8.32 0.00 43.03 4.40
2728 2855 1.372251 CAGCAGTGTTCTCGTCGCT 60.372 57.895 0.00 0.00 0.00 4.93
2896 3024 6.605471 TGTATCTTTCAAGGCTCTCTTACA 57.395 37.500 0.00 0.00 33.68 2.41
2943 3071 7.780008 TTTTTGACGAATTCTGTGAGTAAGA 57.220 32.000 3.52 0.00 0.00 2.10
3370 3509 9.213799 GGTAAAAATATCCAAACAGAAAATGCA 57.786 29.630 0.00 0.00 0.00 3.96
3723 3920 7.064253 ACGAATGGTAATTCAGTTTAGTAGCAC 59.936 37.037 0.00 0.00 42.08 4.40
4089 4367 1.434188 TATGGGCTGGACCAGGTATG 58.566 55.000 23.09 0.00 45.20 2.39
4129 4414 8.100508 ACAGAAGAGTTAGGTTAAGCAAAATC 57.899 34.615 7.52 0.12 0.00 2.17
4130 4415 7.939588 AGACAGAAGAGTTAGGTTAAGCAAAAT 59.060 33.333 7.52 0.00 0.00 1.82
4133 4418 6.420913 AGACAGAAGAGTTAGGTTAAGCAA 57.579 37.500 7.52 0.00 0.00 3.91
4323 4609 6.859420 TCTTCATCTGACAAATTCGAAACA 57.141 33.333 0.00 0.00 0.00 2.83
4392 4681 3.014304 ACATCATCAGCATTTCCAGCT 57.986 42.857 0.00 0.00 44.62 4.24
4393 4682 3.129813 TCAACATCATCAGCATTTCCAGC 59.870 43.478 0.00 0.00 0.00 4.85
4532 4821 2.890945 AGCTAAACCCGTGAGCAAAAAT 59.109 40.909 0.00 0.00 38.73 1.82
4535 4824 2.038033 ACTAGCTAAACCCGTGAGCAAA 59.962 45.455 0.00 0.00 38.73 3.68
4542 4831 3.105959 TCCCTAACTAGCTAAACCCGT 57.894 47.619 0.00 0.00 0.00 5.28
4547 4836 4.212716 TCTCGCATCCCTAACTAGCTAAA 58.787 43.478 0.00 0.00 0.00 1.85
4553 4842 3.079578 CCGTATCTCGCATCCCTAACTA 58.920 50.000 0.00 0.00 38.35 2.24
4560 4849 0.038251 TGCATCCGTATCTCGCATCC 60.038 55.000 0.00 0.00 38.35 3.51
4593 4882 8.772705 AGTGAAATAAAACGGTAATCAACGTAA 58.227 29.630 0.00 0.00 43.31 3.18
4606 4895 7.855904 AGTAACTTGCAAGAGTGAAATAAAACG 59.144 33.333 32.50 1.38 0.00 3.60
4607 4896 8.958043 CAGTAACTTGCAAGAGTGAAATAAAAC 58.042 33.333 32.50 11.53 0.00 2.43
4608 4897 7.647715 GCAGTAACTTGCAAGAGTGAAATAAAA 59.352 33.333 32.50 0.08 43.53 1.52
4612 4901 4.823989 AGCAGTAACTTGCAAGAGTGAAAT 59.176 37.500 32.50 10.56 46.47 2.17
4644 4933 9.398170 CATGAAATAGAAAAACCAACACTACTG 57.602 33.333 0.00 0.00 0.00 2.74
4668 4957 4.327680 GAGGGAGACTACAAAGTTTGCAT 58.672 43.478 15.59 1.06 35.56 3.96
4670 4960 2.737252 CGAGGGAGACTACAAAGTTTGC 59.263 50.000 15.59 0.00 35.56 3.68
4846 5150 6.126409 ACATTTTGAGACCCTGTAAGAACAA 58.874 36.000 0.00 0.00 34.49 2.83
4848 5152 7.159372 TCTACATTTTGAGACCCTGTAAGAAC 58.841 38.462 0.00 0.00 34.07 3.01
4872 5176 5.174395 ACAGTGAAATGCTCATCAGTACTC 58.826 41.667 0.00 0.00 36.14 2.59
4897 5203 6.661377 TGCTGGCTGTAAAAGTATCCATAAAA 59.339 34.615 0.00 0.00 0.00 1.52
4973 5282 3.914364 GCAAACGAAAACTAAGCCTGATG 59.086 43.478 0.00 0.00 0.00 3.07
4995 5305 4.067896 AGGCTCATAATGTAGCAATTCGG 58.932 43.478 0.00 0.00 40.61 4.30
5015 5325 1.303236 TGGATGGTTGCCGAACAGG 60.303 57.895 0.00 0.00 44.97 4.00
5016 5326 0.606401 AGTGGATGGTTGCCGAACAG 60.606 55.000 0.00 0.00 33.27 3.16
5017 5327 0.605319 GAGTGGATGGTTGCCGAACA 60.605 55.000 0.00 0.00 33.27 3.18
5018 5328 1.305930 GGAGTGGATGGTTGCCGAAC 61.306 60.000 0.00 0.00 0.00 3.95
5019 5329 1.002624 GGAGTGGATGGTTGCCGAA 60.003 57.895 0.00 0.00 0.00 4.30
5020 5330 1.899437 GAGGAGTGGATGGTTGCCGA 61.899 60.000 0.00 0.00 0.00 5.54
5021 5331 1.450312 GAGGAGTGGATGGTTGCCG 60.450 63.158 0.00 0.00 0.00 5.69
5022 5332 0.393537 CAGAGGAGTGGATGGTTGCC 60.394 60.000 0.00 0.00 0.00 4.52
5023 5333 0.615331 TCAGAGGAGTGGATGGTTGC 59.385 55.000 0.00 0.00 0.00 4.17
5024 5334 3.641434 ATTCAGAGGAGTGGATGGTTG 57.359 47.619 0.00 0.00 0.00 3.77
5025 5335 3.848975 AGAATTCAGAGGAGTGGATGGTT 59.151 43.478 8.44 0.00 0.00 3.67
5026 5336 3.454082 GAGAATTCAGAGGAGTGGATGGT 59.546 47.826 8.44 0.00 0.00 3.55
5027 5337 3.453717 TGAGAATTCAGAGGAGTGGATGG 59.546 47.826 8.44 0.00 0.00 3.51
5028 5338 4.750021 TGAGAATTCAGAGGAGTGGATG 57.250 45.455 8.44 0.00 0.00 3.51
5029 5339 4.782156 AGTTGAGAATTCAGAGGAGTGGAT 59.218 41.667 8.44 0.00 34.15 3.41
5030 5340 4.163427 AGTTGAGAATTCAGAGGAGTGGA 58.837 43.478 8.44 0.00 34.15 4.02
5031 5341 4.502962 GAGTTGAGAATTCAGAGGAGTGG 58.497 47.826 8.44 0.00 34.15 4.00
5032 5342 4.020751 TGGAGTTGAGAATTCAGAGGAGTG 60.021 45.833 8.44 0.00 34.15 3.51
5033 5343 4.020662 GTGGAGTTGAGAATTCAGAGGAGT 60.021 45.833 8.44 0.00 34.15 3.85
5034 5344 4.222588 AGTGGAGTTGAGAATTCAGAGGAG 59.777 45.833 8.44 0.00 34.15 3.69
5035 5345 4.163427 AGTGGAGTTGAGAATTCAGAGGA 58.837 43.478 8.44 0.00 34.15 3.71
5036 5346 4.502962 GAGTGGAGTTGAGAATTCAGAGG 58.497 47.826 8.44 0.00 34.15 3.69
5037 5347 4.222588 AGGAGTGGAGTTGAGAATTCAGAG 59.777 45.833 8.44 0.00 34.15 3.35
5038 5348 4.163427 AGGAGTGGAGTTGAGAATTCAGA 58.837 43.478 8.44 0.00 34.15 3.27
5039 5349 4.502962 GAGGAGTGGAGTTGAGAATTCAG 58.497 47.826 8.44 0.00 34.15 3.02
5040 5350 3.056536 CGAGGAGTGGAGTTGAGAATTCA 60.057 47.826 8.44 0.00 0.00 2.57
5041 5351 3.193691 TCGAGGAGTGGAGTTGAGAATTC 59.806 47.826 0.00 0.00 0.00 2.17
5042 5352 3.165875 TCGAGGAGTGGAGTTGAGAATT 58.834 45.455 0.00 0.00 0.00 2.17
5043 5353 2.808919 TCGAGGAGTGGAGTTGAGAAT 58.191 47.619 0.00 0.00 0.00 2.40
5044 5354 2.287977 TCGAGGAGTGGAGTTGAGAA 57.712 50.000 0.00 0.00 0.00 2.87
5045 5355 2.516227 ATCGAGGAGTGGAGTTGAGA 57.484 50.000 0.00 0.00 0.00 3.27
5046 5356 2.159170 GGAATCGAGGAGTGGAGTTGAG 60.159 54.545 0.00 0.00 0.00 3.02
5047 5357 1.825474 GGAATCGAGGAGTGGAGTTGA 59.175 52.381 0.00 0.00 0.00 3.18
5048 5358 1.134670 GGGAATCGAGGAGTGGAGTTG 60.135 57.143 0.00 0.00 0.00 3.16
5049 5359 1.196012 GGGAATCGAGGAGTGGAGTT 58.804 55.000 0.00 0.00 0.00 3.01
5050 5360 0.041238 TGGGAATCGAGGAGTGGAGT 59.959 55.000 0.00 0.00 0.00 3.85
5051 5361 1.134670 GTTGGGAATCGAGGAGTGGAG 60.135 57.143 0.00 0.00 0.00 3.86
5052 5362 0.902531 GTTGGGAATCGAGGAGTGGA 59.097 55.000 0.00 0.00 0.00 4.02
5053 5363 0.905357 AGTTGGGAATCGAGGAGTGG 59.095 55.000 0.00 0.00 0.00 4.00
5054 5364 1.134670 GGAGTTGGGAATCGAGGAGTG 60.135 57.143 0.00 0.00 0.00 3.51
5055 5365 1.196012 GGAGTTGGGAATCGAGGAGT 58.804 55.000 0.00 0.00 0.00 3.85
5056 5366 0.466124 GGGAGTTGGGAATCGAGGAG 59.534 60.000 0.00 0.00 0.00 3.69
5057 5367 0.252513 TGGGAGTTGGGAATCGAGGA 60.253 55.000 0.00 0.00 0.00 3.71
5058 5368 0.179000 CTGGGAGTTGGGAATCGAGG 59.821 60.000 0.00 0.00 0.00 4.63
5059 5369 0.462759 GCTGGGAGTTGGGAATCGAG 60.463 60.000 0.00 0.00 0.00 4.04
5060 5370 0.909610 AGCTGGGAGTTGGGAATCGA 60.910 55.000 0.00 0.00 0.00 3.59
5061 5371 0.462759 GAGCTGGGAGTTGGGAATCG 60.463 60.000 0.00 0.00 0.00 3.34
5062 5372 0.106967 GGAGCTGGGAGTTGGGAATC 60.107 60.000 0.00 0.00 0.00 2.52
5063 5373 0.846427 TGGAGCTGGGAGTTGGGAAT 60.846 55.000 0.00 0.00 0.00 3.01
5064 5374 0.846427 ATGGAGCTGGGAGTTGGGAA 60.846 55.000 0.00 0.00 0.00 3.97
5065 5375 0.846427 AATGGAGCTGGGAGTTGGGA 60.846 55.000 0.00 0.00 0.00 4.37
5066 5376 0.918983 TAATGGAGCTGGGAGTTGGG 59.081 55.000 0.00 0.00 0.00 4.12
5067 5377 2.338577 CTAATGGAGCTGGGAGTTGG 57.661 55.000 0.00 0.00 0.00 3.77
5075 5385 9.374838 AAATTCTAAAATTTGCTAATGGAGCTG 57.625 29.630 0.00 0.00 42.21 4.24
5088 5398 8.281893 CGAACATGTTGCCAAATTCTAAAATTT 58.718 29.630 17.58 0.00 44.12 1.82
5089 5399 7.095271 CCGAACATGTTGCCAAATTCTAAAATT 60.095 33.333 17.58 0.00 36.64 1.82
5090 5400 6.368516 CCGAACATGTTGCCAAATTCTAAAAT 59.631 34.615 17.58 0.00 0.00 1.82
5091 5401 5.694006 CCGAACATGTTGCCAAATTCTAAAA 59.306 36.000 17.58 0.00 0.00 1.52
5092 5402 5.226396 CCGAACATGTTGCCAAATTCTAAA 58.774 37.500 17.58 0.00 0.00 1.85
5093 5403 4.804108 CCGAACATGTTGCCAAATTCTAA 58.196 39.130 17.58 0.00 0.00 2.10
5094 5404 3.366883 GCCGAACATGTTGCCAAATTCTA 60.367 43.478 17.58 0.00 0.00 2.10
5095 5405 2.610232 GCCGAACATGTTGCCAAATTCT 60.610 45.455 17.58 0.00 0.00 2.40
5096 5406 1.726248 GCCGAACATGTTGCCAAATTC 59.274 47.619 17.58 0.00 0.00 2.17
5097 5407 1.069823 TGCCGAACATGTTGCCAAATT 59.930 42.857 17.58 0.00 0.00 1.82
5098 5408 0.678395 TGCCGAACATGTTGCCAAAT 59.322 45.000 17.58 0.00 0.00 2.32
5099 5409 0.031857 CTGCCGAACATGTTGCCAAA 59.968 50.000 17.58 0.00 0.00 3.28
5100 5410 1.659233 CTGCCGAACATGTTGCCAA 59.341 52.632 17.58 0.00 0.00 4.52
5101 5411 2.918345 GCTGCCGAACATGTTGCCA 61.918 57.895 17.58 8.83 0.00 4.92
5102 5412 2.126346 GCTGCCGAACATGTTGCC 60.126 61.111 17.58 1.01 0.00 4.52
5103 5413 2.126346 GGCTGCCGAACATGTTGC 60.126 61.111 17.58 14.69 0.00 4.17
5104 5414 0.664166 GTTGGCTGCCGAACATGTTG 60.664 55.000 17.58 8.34 0.00 3.33
5105 5415 0.823356 AGTTGGCTGCCGAACATGTT 60.823 50.000 25.21 11.78 0.00 2.71
5106 5416 1.228245 AGTTGGCTGCCGAACATGT 60.228 52.632 25.21 0.00 0.00 3.21
5107 5417 1.503542 GAGTTGGCTGCCGAACATG 59.496 57.895 25.21 0.00 0.00 3.21
5108 5418 1.675641 GGAGTTGGCTGCCGAACAT 60.676 57.895 25.21 15.55 0.00 2.71
5109 5419 2.281484 GGAGTTGGCTGCCGAACA 60.281 61.111 25.21 4.82 0.00 3.18
5110 5420 1.896660 TTGGAGTTGGCTGCCGAAC 60.897 57.895 10.93 16.50 31.52 3.95
5111 5421 1.896660 GTTGGAGTTGGCTGCCGAA 60.897 57.895 10.93 4.80 31.52 4.30
5112 5422 2.281484 GTTGGAGTTGGCTGCCGA 60.281 61.111 14.98 9.85 31.52 5.54
5113 5423 2.281761 AGTTGGAGTTGGCTGCCG 60.282 61.111 14.98 0.00 31.52 5.69
5114 5424 1.973812 GGAGTTGGAGTTGGCTGCC 60.974 63.158 12.87 12.87 31.52 4.85
5115 5425 0.957888 GAGGAGTTGGAGTTGGCTGC 60.958 60.000 0.00 0.00 0.00 5.25
5116 5426 0.397941 TGAGGAGTTGGAGTTGGCTG 59.602 55.000 0.00 0.00 0.00 4.85
5117 5427 0.398318 GTGAGGAGTTGGAGTTGGCT 59.602 55.000 0.00 0.00 0.00 4.75
5118 5428 0.606673 GGTGAGGAGTTGGAGTTGGC 60.607 60.000 0.00 0.00 0.00 4.52
5119 5429 1.059913 AGGTGAGGAGTTGGAGTTGG 58.940 55.000 0.00 0.00 0.00 3.77
5120 5430 1.417890 ACAGGTGAGGAGTTGGAGTTG 59.582 52.381 0.00 0.00 0.00 3.16
5121 5431 1.807814 ACAGGTGAGGAGTTGGAGTT 58.192 50.000 0.00 0.00 0.00 3.01
5122 5432 2.696526 TACAGGTGAGGAGTTGGAGT 57.303 50.000 0.00 0.00 0.00 3.85
5123 5433 4.559862 AAATACAGGTGAGGAGTTGGAG 57.440 45.455 0.00 0.00 0.00 3.86
5124 5434 4.597507 AGAAAATACAGGTGAGGAGTTGGA 59.402 41.667 0.00 0.00 0.00 3.53
5125 5435 4.911390 AGAAAATACAGGTGAGGAGTTGG 58.089 43.478 0.00 0.00 0.00 3.77
5126 5436 7.824289 TCAATAGAAAATACAGGTGAGGAGTTG 59.176 37.037 0.00 0.00 0.00 3.16
5127 5437 7.918076 TCAATAGAAAATACAGGTGAGGAGTT 58.082 34.615 0.00 0.00 0.00 3.01
5128 5438 7.496346 TCAATAGAAAATACAGGTGAGGAGT 57.504 36.000 0.00 0.00 0.00 3.85
5129 5439 7.497249 CCTTCAATAGAAAATACAGGTGAGGAG 59.503 40.741 0.00 0.00 32.35 3.69
5130 5440 7.182026 TCCTTCAATAGAAAATACAGGTGAGGA 59.818 37.037 0.00 0.00 32.35 3.71
5131 5441 7.338710 TCCTTCAATAGAAAATACAGGTGAGG 58.661 38.462 0.00 0.00 32.35 3.86
5132 5442 8.669243 GTTCCTTCAATAGAAAATACAGGTGAG 58.331 37.037 0.00 0.00 32.35 3.51
5133 5443 7.610305 GGTTCCTTCAATAGAAAATACAGGTGA 59.390 37.037 0.00 0.00 32.35 4.02
5134 5444 7.414098 CGGTTCCTTCAATAGAAAATACAGGTG 60.414 40.741 0.00 0.00 32.35 4.00
5135 5445 6.598064 CGGTTCCTTCAATAGAAAATACAGGT 59.402 38.462 0.00 0.00 32.35 4.00
5136 5446 6.038271 CCGGTTCCTTCAATAGAAAATACAGG 59.962 42.308 0.00 0.00 32.35 4.00
5137 5447 6.458342 GCCGGTTCCTTCAATAGAAAATACAG 60.458 42.308 1.90 0.00 32.35 2.74
5138 5448 5.355910 GCCGGTTCCTTCAATAGAAAATACA 59.644 40.000 1.90 0.00 32.35 2.29
5139 5449 5.355910 TGCCGGTTCCTTCAATAGAAAATAC 59.644 40.000 1.90 0.00 32.35 1.89
5140 5450 5.502079 TGCCGGTTCCTTCAATAGAAAATA 58.498 37.500 1.90 0.00 32.35 1.40
5141 5451 4.340617 TGCCGGTTCCTTCAATAGAAAAT 58.659 39.130 1.90 0.00 32.35 1.82
5142 5452 3.756434 CTGCCGGTTCCTTCAATAGAAAA 59.244 43.478 1.90 0.00 32.35 2.29
5143 5453 3.343617 CTGCCGGTTCCTTCAATAGAAA 58.656 45.455 1.90 0.00 32.35 2.52
5144 5454 2.355716 CCTGCCGGTTCCTTCAATAGAA 60.356 50.000 1.90 0.00 0.00 2.10
5145 5455 1.209504 CCTGCCGGTTCCTTCAATAGA 59.790 52.381 1.90 0.00 0.00 1.98
5146 5456 1.209504 TCCTGCCGGTTCCTTCAATAG 59.790 52.381 1.90 0.00 0.00 1.73
5147 5457 1.209504 CTCCTGCCGGTTCCTTCAATA 59.790 52.381 1.90 0.00 0.00 1.90
5148 5458 0.035056 CTCCTGCCGGTTCCTTCAAT 60.035 55.000 1.90 0.00 0.00 2.57
5149 5459 1.374947 CTCCTGCCGGTTCCTTCAA 59.625 57.895 1.90 0.00 0.00 2.69
5150 5460 1.415672 AACTCCTGCCGGTTCCTTCA 61.416 55.000 1.90 0.00 0.00 3.02
5151 5461 0.611714 TAACTCCTGCCGGTTCCTTC 59.388 55.000 1.90 0.00 0.00 3.46
5152 5462 1.061546 TTAACTCCTGCCGGTTCCTT 58.938 50.000 1.90 0.00 0.00 3.36
5153 5463 1.003233 CTTTAACTCCTGCCGGTTCCT 59.997 52.381 1.90 0.00 0.00 3.36
5154 5464 1.271217 ACTTTAACTCCTGCCGGTTCC 60.271 52.381 1.90 0.00 0.00 3.62
5155 5465 1.804748 CACTTTAACTCCTGCCGGTTC 59.195 52.381 1.90 0.00 0.00 3.62
5156 5466 1.418637 TCACTTTAACTCCTGCCGGTT 59.581 47.619 1.90 0.00 0.00 4.44
5157 5467 1.002087 CTCACTTTAACTCCTGCCGGT 59.998 52.381 1.90 0.00 0.00 5.28
5158 5468 1.275291 TCTCACTTTAACTCCTGCCGG 59.725 52.381 0.00 0.00 0.00 6.13
5159 5469 2.028930 ACTCTCACTTTAACTCCTGCCG 60.029 50.000 0.00 0.00 0.00 5.69
5160 5470 3.591023 GACTCTCACTTTAACTCCTGCC 58.409 50.000 0.00 0.00 0.00 4.85
5161 5471 3.246619 CGACTCTCACTTTAACTCCTGC 58.753 50.000 0.00 0.00 0.00 4.85
5162 5472 4.477780 GACGACTCTCACTTTAACTCCTG 58.522 47.826 0.00 0.00 0.00 3.86
5163 5473 3.506844 GGACGACTCTCACTTTAACTCCT 59.493 47.826 0.00 0.00 0.00 3.69
5164 5474 3.670091 CGGACGACTCTCACTTTAACTCC 60.670 52.174 0.00 0.00 0.00 3.85
5165 5475 3.058363 ACGGACGACTCTCACTTTAACTC 60.058 47.826 0.00 0.00 0.00 3.01
5166 5476 2.883386 ACGGACGACTCTCACTTTAACT 59.117 45.455 0.00 0.00 0.00 2.24
5167 5477 3.232771 GACGGACGACTCTCACTTTAAC 58.767 50.000 0.00 0.00 0.00 2.01
5168 5478 2.880268 TGACGGACGACTCTCACTTTAA 59.120 45.455 0.00 0.00 0.00 1.52
5169 5479 2.483106 CTGACGGACGACTCTCACTTTA 59.517 50.000 0.00 0.00 0.00 1.85
5170 5480 1.267261 CTGACGGACGACTCTCACTTT 59.733 52.381 0.00 0.00 0.00 2.66
5171 5481 0.875728 CTGACGGACGACTCTCACTT 59.124 55.000 0.00 0.00 0.00 3.16
5172 5482 0.250381 ACTGACGGACGACTCTCACT 60.250 55.000 0.00 0.00 0.00 3.41
5173 5483 0.110147 CACTGACGGACGACTCTCAC 60.110 60.000 0.00 0.00 0.00 3.51
5174 5484 0.534427 ACACTGACGGACGACTCTCA 60.534 55.000 0.00 0.00 0.00 3.27
5175 5485 0.110147 CACACTGACGGACGACTCTC 60.110 60.000 0.00 0.00 0.00 3.20
5176 5486 1.950007 CACACTGACGGACGACTCT 59.050 57.895 0.00 0.00 0.00 3.24
5177 5487 1.729838 GCACACTGACGGACGACTC 60.730 63.158 0.00 0.00 0.00 3.36
5178 5488 2.194212 AGCACACTGACGGACGACT 61.194 57.895 0.00 0.00 0.00 4.18
5179 5489 2.335369 AGCACACTGACGGACGAC 59.665 61.111 0.00 0.00 0.00 4.34
5189 5499 1.095228 CGACAACCCAACAGCACACT 61.095 55.000 0.00 0.00 0.00 3.55
5190 5500 1.092921 TCGACAACCCAACAGCACAC 61.093 55.000 0.00 0.00 0.00 3.82
5191 5501 0.393132 TTCGACAACCCAACAGCACA 60.393 50.000 0.00 0.00 0.00 4.57
5192 5502 0.028902 GTTCGACAACCCAACAGCAC 59.971 55.000 0.00 0.00 0.00 4.40
5193 5503 1.098712 GGTTCGACAACCCAACAGCA 61.099 55.000 0.00 0.00 46.01 4.41
5194 5504 1.652563 GGTTCGACAACCCAACAGC 59.347 57.895 0.00 0.00 46.01 4.40
5202 5512 2.033492 CACAACTTACCGGTTCGACAAC 60.033 50.000 15.04 0.00 0.00 3.32
5203 5513 2.203401 CACAACTTACCGGTTCGACAA 58.797 47.619 15.04 0.00 0.00 3.18
5204 5514 1.538634 CCACAACTTACCGGTTCGACA 60.539 52.381 15.04 0.00 0.00 4.35
5205 5515 1.142474 CCACAACTTACCGGTTCGAC 58.858 55.000 15.04 0.00 0.00 4.20
5206 5516 0.600782 GCCACAACTTACCGGTTCGA 60.601 55.000 15.04 0.00 0.00 3.71
5207 5517 0.881159 TGCCACAACTTACCGGTTCG 60.881 55.000 15.04 6.87 0.00 3.95
5208 5518 1.310904 TTGCCACAACTTACCGGTTC 58.689 50.000 15.04 0.00 0.00 3.62
5209 5519 1.679153 CTTTGCCACAACTTACCGGTT 59.321 47.619 15.04 0.00 0.00 4.44
5210 5520 1.314730 CTTTGCCACAACTTACCGGT 58.685 50.000 13.98 13.98 0.00 5.28
5211 5521 0.596082 CCTTTGCCACAACTTACCGG 59.404 55.000 0.00 0.00 0.00 5.28
5212 5522 1.001815 CACCTTTGCCACAACTTACCG 60.002 52.381 0.00 0.00 0.00 4.02
5213 5523 1.339929 CCACCTTTGCCACAACTTACC 59.660 52.381 0.00 0.00 0.00 2.85
5214 5524 1.339929 CCCACCTTTGCCACAACTTAC 59.660 52.381 0.00 0.00 0.00 2.34
5215 5525 1.063567 ACCCACCTTTGCCACAACTTA 60.064 47.619 0.00 0.00 0.00 2.24
5216 5526 0.325203 ACCCACCTTTGCCACAACTT 60.325 50.000 0.00 0.00 0.00 2.66
5217 5527 0.553819 TACCCACCTTTGCCACAACT 59.446 50.000 0.00 0.00 0.00 3.16
5218 5528 0.958822 CTACCCACCTTTGCCACAAC 59.041 55.000 0.00 0.00 0.00 3.32
5219 5529 0.847373 TCTACCCACCTTTGCCACAA 59.153 50.000 0.00 0.00 0.00 3.33
5220 5530 0.847373 TTCTACCCACCTTTGCCACA 59.153 50.000 0.00 0.00 0.00 4.17
5221 5531 1.989706 TTTCTACCCACCTTTGCCAC 58.010 50.000 0.00 0.00 0.00 5.01
5222 5532 2.091555 AGTTTTCTACCCACCTTTGCCA 60.092 45.455 0.00 0.00 0.00 4.92
5223 5533 2.594131 AGTTTTCTACCCACCTTTGCC 58.406 47.619 0.00 0.00 0.00 4.52
5224 5534 4.098807 TCAAAGTTTTCTACCCACCTTTGC 59.901 41.667 0.00 0.00 38.90 3.68
5225 5535 5.845391 TCAAAGTTTTCTACCCACCTTTG 57.155 39.130 0.00 0.00 39.86 2.77
5226 5536 5.955959 AGTTCAAAGTTTTCTACCCACCTTT 59.044 36.000 0.00 0.00 0.00 3.11
5227 5537 5.516044 AGTTCAAAGTTTTCTACCCACCTT 58.484 37.500 0.00 0.00 0.00 3.50
5228 5538 5.125367 AGTTCAAAGTTTTCTACCCACCT 57.875 39.130 0.00 0.00 0.00 4.00
5229 5539 4.277672 GGAGTTCAAAGTTTTCTACCCACC 59.722 45.833 0.00 0.00 0.00 4.61
5230 5540 4.885325 TGGAGTTCAAAGTTTTCTACCCAC 59.115 41.667 0.00 0.00 0.00 4.61
5231 5541 5.118729 TGGAGTTCAAAGTTTTCTACCCA 57.881 39.130 0.00 0.00 0.00 4.51
5232 5542 4.519350 CCTGGAGTTCAAAGTTTTCTACCC 59.481 45.833 0.00 0.00 0.00 3.69
5233 5543 4.519350 CCCTGGAGTTCAAAGTTTTCTACC 59.481 45.833 0.00 0.00 0.00 3.18
5234 5544 5.238868 GTCCCTGGAGTTCAAAGTTTTCTAC 59.761 44.000 0.00 0.00 0.00 2.59
5235 5545 5.104277 TGTCCCTGGAGTTCAAAGTTTTCTA 60.104 40.000 0.00 0.00 0.00 2.10
5236 5546 4.207955 GTCCCTGGAGTTCAAAGTTTTCT 58.792 43.478 0.00 0.00 0.00 2.52
5237 5547 3.951680 TGTCCCTGGAGTTCAAAGTTTTC 59.048 43.478 0.00 0.00 0.00 2.29
5238 5548 3.976015 TGTCCCTGGAGTTCAAAGTTTT 58.024 40.909 0.00 0.00 0.00 2.43
5239 5549 3.662759 TGTCCCTGGAGTTCAAAGTTT 57.337 42.857 0.00 0.00 0.00 2.66
5240 5550 3.662759 TTGTCCCTGGAGTTCAAAGTT 57.337 42.857 0.00 0.00 0.00 2.66
5241 5551 3.395941 AGATTGTCCCTGGAGTTCAAAGT 59.604 43.478 0.00 0.00 0.00 2.66
5242 5552 4.006319 GAGATTGTCCCTGGAGTTCAAAG 58.994 47.826 0.00 0.00 0.00 2.77
5243 5553 3.557054 CGAGATTGTCCCTGGAGTTCAAA 60.557 47.826 0.00 0.00 0.00 2.69
5244 5554 2.028112 CGAGATTGTCCCTGGAGTTCAA 60.028 50.000 0.00 0.00 0.00 2.69
5245 5555 1.550524 CGAGATTGTCCCTGGAGTTCA 59.449 52.381 0.00 0.00 0.00 3.18
5246 5556 1.550976 ACGAGATTGTCCCTGGAGTTC 59.449 52.381 0.00 0.00 0.00 3.01
5247 5557 1.645710 ACGAGATTGTCCCTGGAGTT 58.354 50.000 0.00 0.00 0.00 3.01
5248 5558 2.100989 GTACGAGATTGTCCCTGGAGT 58.899 52.381 0.00 0.00 0.00 3.85
5249 5559 2.099921 CTGTACGAGATTGTCCCTGGAG 59.900 54.545 0.00 0.00 0.00 3.86
5250 5560 2.100197 CTGTACGAGATTGTCCCTGGA 58.900 52.381 0.00 0.00 0.00 3.86
5251 5561 1.825474 ACTGTACGAGATTGTCCCTGG 59.175 52.381 0.00 0.00 0.00 4.45
5252 5562 2.492088 TCACTGTACGAGATTGTCCCTG 59.508 50.000 0.00 0.00 0.00 4.45
5253 5563 2.755655 CTCACTGTACGAGATTGTCCCT 59.244 50.000 0.00 0.00 31.84 4.20
5254 5564 2.753452 TCTCACTGTACGAGATTGTCCC 59.247 50.000 0.00 0.00 34.59 4.46
5255 5565 3.190744 TGTCTCACTGTACGAGATTGTCC 59.809 47.826 2.80 0.00 41.39 4.02
5256 5566 4.421033 TGTCTCACTGTACGAGATTGTC 57.579 45.455 2.80 0.00 41.39 3.18
5257 5567 4.738124 CATGTCTCACTGTACGAGATTGT 58.262 43.478 2.80 0.00 41.39 2.71
5258 5568 3.549471 GCATGTCTCACTGTACGAGATTG 59.451 47.826 2.80 5.48 41.39 2.67
5259 5569 3.732169 CGCATGTCTCACTGTACGAGATT 60.732 47.826 2.80 0.00 41.39 2.40
5260 5570 2.223363 CGCATGTCTCACTGTACGAGAT 60.223 50.000 2.80 0.00 41.39 2.75
5261 5571 1.130561 CGCATGTCTCACTGTACGAGA 59.869 52.381 0.00 0.00 37.18 4.04
5262 5572 1.539341 CGCATGTCTCACTGTACGAG 58.461 55.000 0.00 0.00 0.00 4.18
5263 5573 0.170339 CCGCATGTCTCACTGTACGA 59.830 55.000 0.00 0.00 0.00 3.43
5264 5574 0.170339 TCCGCATGTCTCACTGTACG 59.830 55.000 0.00 0.00 0.00 3.67
5265 5575 1.914634 CTCCGCATGTCTCACTGTAC 58.085 55.000 0.00 0.00 0.00 2.90
5266 5576 0.173481 GCTCCGCATGTCTCACTGTA 59.827 55.000 0.00 0.00 0.00 2.74
5267 5577 1.079543 GCTCCGCATGTCTCACTGT 60.080 57.895 0.00 0.00 0.00 3.55
5268 5578 2.163390 CGCTCCGCATGTCTCACTG 61.163 63.158 0.00 0.00 0.00 3.66
5269 5579 2.182791 CGCTCCGCATGTCTCACT 59.817 61.111 0.00 0.00 0.00 3.41
5270 5580 2.887568 CCGCTCCGCATGTCTCAC 60.888 66.667 0.00 0.00 0.00 3.51
5271 5581 4.147449 CCCGCTCCGCATGTCTCA 62.147 66.667 0.00 0.00 0.00 3.27
5289 5599 3.554692 CGCTAAAGTGGCGCTCCG 61.555 66.667 7.64 0.00 45.83 4.63
5295 5605 0.741221 CTGGGAGTCGCTAAAGTGGC 60.741 60.000 8.82 0.00 0.00 5.01
5296 5606 0.895530 TCTGGGAGTCGCTAAAGTGG 59.104 55.000 8.82 0.00 0.00 4.00
5297 5607 2.743636 TTCTGGGAGTCGCTAAAGTG 57.256 50.000 8.82 0.00 0.00 3.16
5298 5608 3.764237 TTTTCTGGGAGTCGCTAAAGT 57.236 42.857 8.82 0.00 0.00 2.66
5299 5609 3.375299 CCATTTTCTGGGAGTCGCTAAAG 59.625 47.826 8.82 0.00 41.82 1.85
5300 5610 3.343617 CCATTTTCTGGGAGTCGCTAAA 58.656 45.455 8.82 6.49 41.82 1.85
5301 5611 2.985896 CCATTTTCTGGGAGTCGCTAA 58.014 47.619 8.82 0.48 41.82 3.09
5302 5612 2.691409 CCATTTTCTGGGAGTCGCTA 57.309 50.000 8.82 0.00 41.82 4.26
5303 5613 3.558674 CCATTTTCTGGGAGTCGCT 57.441 52.632 8.82 0.00 41.82 4.93
5312 5622 2.749621 GTGGCCAGTAGACCATTTTCTG 59.250 50.000 5.11 0.00 38.46 3.02
5313 5623 2.644798 AGTGGCCAGTAGACCATTTTCT 59.355 45.455 12.69 0.00 38.46 2.52
5314 5624 3.010420 GAGTGGCCAGTAGACCATTTTC 58.990 50.000 14.64 0.00 38.46 2.29
5315 5625 2.290960 GGAGTGGCCAGTAGACCATTTT 60.291 50.000 14.64 0.00 38.46 1.82
5316 5626 1.282157 GGAGTGGCCAGTAGACCATTT 59.718 52.381 14.64 0.00 38.46 2.32
5317 5627 0.912486 GGAGTGGCCAGTAGACCATT 59.088 55.000 14.64 0.00 38.46 3.16
5318 5628 1.330655 CGGAGTGGCCAGTAGACCAT 61.331 60.000 14.64 0.00 38.46 3.55
5319 5629 1.982395 CGGAGTGGCCAGTAGACCA 60.982 63.158 14.64 0.00 35.94 4.02
5320 5630 2.893398 CGGAGTGGCCAGTAGACC 59.107 66.667 14.64 10.01 35.94 3.85
5321 5631 2.184579 GCGGAGTGGCCAGTAGAC 59.815 66.667 14.64 6.19 35.94 2.59
5322 5632 2.037367 AGCGGAGTGGCCAGTAGA 59.963 61.111 14.64 0.00 35.94 2.59
5323 5633 2.496817 GAGCGGAGTGGCCAGTAG 59.503 66.667 14.64 12.07 35.94 2.57
5324 5634 3.075005 GGAGCGGAGTGGCCAGTA 61.075 66.667 14.64 0.00 35.94 2.74
5336 5646 1.146358 GATTTCCTCGTTCCGGAGCG 61.146 60.000 31.98 31.98 36.35 5.03
5337 5647 1.146358 CGATTTCCTCGTTCCGGAGC 61.146 60.000 8.48 8.48 42.56 4.70
5338 5648 2.959275 CGATTTCCTCGTTCCGGAG 58.041 57.895 3.34 0.00 42.56 4.63
5347 5657 2.134346 GATCAGCTCAGCGATTTCCTC 58.866 52.381 5.62 0.00 0.00 3.71
5348 5658 1.761784 AGATCAGCTCAGCGATTTCCT 59.238 47.619 5.62 0.00 0.00 3.36
5349 5659 1.865970 CAGATCAGCTCAGCGATTTCC 59.134 52.381 5.62 0.00 0.00 3.13
5350 5660 2.548875 ACAGATCAGCTCAGCGATTTC 58.451 47.619 5.62 0.00 0.00 2.17
5351 5661 2.687700 ACAGATCAGCTCAGCGATTT 57.312 45.000 5.62 0.00 0.00 2.17
5352 5662 2.548875 GAACAGATCAGCTCAGCGATT 58.451 47.619 5.62 0.00 0.00 3.34
5353 5663 1.535649 CGAACAGATCAGCTCAGCGAT 60.536 52.381 3.99 3.99 0.00 4.58
5354 5664 0.179153 CGAACAGATCAGCTCAGCGA 60.179 55.000 0.00 0.00 0.00 4.93
5355 5665 1.144565 CCGAACAGATCAGCTCAGCG 61.145 60.000 0.00 0.00 0.00 5.18
5356 5666 0.108424 ACCGAACAGATCAGCTCAGC 60.108 55.000 0.00 0.00 0.00 4.26
5357 5667 1.638133 CACCGAACAGATCAGCTCAG 58.362 55.000 0.00 0.00 0.00 3.35
5358 5668 0.390340 GCACCGAACAGATCAGCTCA 60.390 55.000 0.00 0.00 0.00 4.26
5359 5669 1.086634 GGCACCGAACAGATCAGCTC 61.087 60.000 0.00 0.00 0.00 4.09
5360 5670 1.078848 GGCACCGAACAGATCAGCT 60.079 57.895 0.00 0.00 0.00 4.24
5361 5671 2.456119 CGGCACCGAACAGATCAGC 61.456 63.158 2.01 0.00 42.83 4.26
5362 5672 2.456119 GCGGCACCGAACAGATCAG 61.456 63.158 14.43 0.00 42.83 2.90
5363 5673 2.434185 GCGGCACCGAACAGATCA 60.434 61.111 14.43 0.00 42.83 2.92
5364 5674 2.125512 AGCGGCACCGAACAGATC 60.126 61.111 14.43 0.00 42.83 2.75
5365 5675 2.125512 GAGCGGCACCGAACAGAT 60.126 61.111 14.43 0.00 42.83 2.90
5366 5676 4.373116 GGAGCGGCACCGAACAGA 62.373 66.667 14.43 0.00 42.83 3.41
5367 5677 4.379243 AGGAGCGGCACCGAACAG 62.379 66.667 14.43 0.00 42.83 3.16
5368 5678 4.680237 CAGGAGCGGCACCGAACA 62.680 66.667 14.43 0.00 42.83 3.18
5379 5689 3.397439 TCCTGGAGCAGCAGGAGC 61.397 66.667 0.00 0.00 42.20 4.70
5389 5699 1.218585 CACAGCTCTGCTCCTGGAG 59.781 63.158 19.55 19.55 36.40 3.86
5390 5700 2.288778 CCACAGCTCTGCTCCTGGA 61.289 63.158 0.00 0.00 36.40 3.86
5391 5701 2.241479 CTCCACAGCTCTGCTCCTGG 62.241 65.000 6.50 6.50 36.40 4.45
5392 5702 1.218585 CTCCACAGCTCTGCTCCTG 59.781 63.158 0.00 0.00 36.40 3.86
5393 5703 1.229145 ACTCCACAGCTCTGCTCCT 60.229 57.895 0.00 0.00 36.40 3.69
5394 5704 1.079266 CACTCCACAGCTCTGCTCC 60.079 63.158 0.00 0.00 36.40 4.70
5395 5705 1.079266 CCACTCCACAGCTCTGCTC 60.079 63.158 0.00 0.00 36.40 4.26
5396 5706 1.534959 TCCACTCCACAGCTCTGCT 60.535 57.895 0.00 0.00 40.77 4.24
5397 5707 1.079266 CTCCACTCCACAGCTCTGC 60.079 63.158 0.00 0.00 0.00 4.26
5398 5708 1.595882 CCTCCACTCCACAGCTCTG 59.404 63.158 0.00 0.00 0.00 3.35
5399 5709 1.611851 CCCTCCACTCCACAGCTCT 60.612 63.158 0.00 0.00 0.00 4.09
5400 5710 2.985456 CCCTCCACTCCACAGCTC 59.015 66.667 0.00 0.00 0.00 4.09
5401 5711 3.325753 GCCCTCCACTCCACAGCT 61.326 66.667 0.00 0.00 0.00 4.24
5402 5712 3.322318 GAGCCCTCCACTCCACAGC 62.322 68.421 0.00 0.00 0.00 4.40
5403 5713 2.985456 GAGCCCTCCACTCCACAG 59.015 66.667 0.00 0.00 0.00 3.66
5413 5723 4.475135 GCCTGTTCGGGAGCCCTC 62.475 72.222 3.70 0.00 0.00 4.30
5417 5727 2.444256 ATAGGGCCTGTTCGGGAGC 61.444 63.158 18.53 0.00 0.00 4.70
5418 5728 1.338136 ACATAGGGCCTGTTCGGGAG 61.338 60.000 18.53 0.00 0.00 4.30
5419 5729 0.912487 AACATAGGGCCTGTTCGGGA 60.912 55.000 18.53 0.00 31.29 5.14
5420 5730 0.748005 CAACATAGGGCCTGTTCGGG 60.748 60.000 18.53 0.00 34.69 5.14
5421 5731 0.251916 TCAACATAGGGCCTGTTCGG 59.748 55.000 18.53 3.04 34.69 4.30
5422 5732 3.853104 TCAACATAGGGCCTGTTCG 57.147 52.632 18.53 8.70 34.69 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.