Multiple sequence alignment - TraesCS1A01G312200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G312200 chr1A 100.000 3432 0 0 1 3432 504218115 504221546 0.000000e+00 6338.0
1 TraesCS1A01G312200 chr2B 93.702 2207 120 12 835 3028 41493448 41495648 0.000000e+00 3288.0
2 TraesCS1A01G312200 chr2B 87.739 1362 136 20 1319 2660 449679905 449678555 0.000000e+00 1561.0
3 TraesCS1A01G312200 chr2B 92.308 429 17 7 3020 3432 41495671 41496099 2.280000e-166 595.0
4 TraesCS1A01G312200 chr2B 84.153 183 13 3 2854 3028 449678513 449678339 2.740000e-36 163.0
5 TraesCS1A01G312200 chr2B 83.832 167 27 0 358 524 449680362 449680196 3.550000e-35 159.0
6 TraesCS1A01G312200 chr1D 92.642 2161 115 10 877 3028 23835877 23838002 0.000000e+00 3070.0
7 TraesCS1A01G312200 chr1D 82.778 1080 130 33 1581 2625 209739620 209738562 0.000000e+00 913.0
8 TraesCS1A01G312200 chr1D 91.055 436 16 6 3020 3432 23838025 23838460 4.970000e-158 568.0
9 TraesCS1A01G312200 chr1D 93.939 165 10 0 355 519 23835689 23835853 2.040000e-62 250.0
10 TraesCS1A01G312200 chr1D 87.500 152 17 2 355 505 491989758 491989908 1.270000e-39 174.0
11 TraesCS1A01G312200 chr3A 92.345 1842 128 9 947 2784 211050413 211048581 0.000000e+00 2608.0
12 TraesCS1A01G312200 chr3A 85.792 366 30 10 3020 3367 211048340 211047979 5.410000e-98 368.0
13 TraesCS1A01G312200 chr3A 94.660 206 8 2 2814 3017 211048579 211048375 1.990000e-82 316.0
14 TraesCS1A01G312200 chr3A 90.058 171 17 0 354 524 211183709 211183539 4.460000e-54 222.0
15 TraesCS1A01G312200 chr3A 90.598 117 11 0 835 951 211183542 211183426 4.590000e-34 156.0
16 TraesCS1A01G312200 chr3A 95.238 42 2 0 2868 2909 211048622 211048581 2.210000e-07 67.6
17 TraesCS1A01G312200 chrUn 87.454 1076 110 15 1590 2650 42301553 42300488 0.000000e+00 1216.0
18 TraesCS1A01G312200 chrUn 87.281 1085 113 14 1581 2650 319476521 319477595 0.000000e+00 1216.0
19 TraesCS1A01G312200 chrUn 93.146 321 18 2 521 837 378051519 378051199 5.190000e-128 468.0
20 TraesCS1A01G312200 chrUn 84.000 425 47 9 3023 3432 42300178 42299760 4.150000e-104 388.0
21 TraesCS1A01G312200 chrUn 83.879 428 48 9 3020 3432 319477902 319478323 4.150000e-104 388.0
22 TraesCS1A01G312200 chrUn 87.405 262 30 1 3174 3432 459804442 459804181 7.200000e-77 298.0
23 TraesCS1A01G312200 chrUn 87.923 207 22 3 2650 2854 42300517 42300312 1.230000e-59 241.0
24 TraesCS1A01G312200 chrUn 87.923 207 22 3 2650 2854 319477566 319477771 1.230000e-59 241.0
25 TraesCS1A01G312200 chrUn 87.310 197 21 2 1316 1508 42301762 42301566 4.460000e-54 222.0
26 TraesCS1A01G312200 chrUn 87.310 197 21 2 1316 1508 319476321 319476517 4.460000e-54 222.0
27 TraesCS1A01G312200 chrUn 85.714 168 24 0 354 521 49292828 49292995 9.790000e-41 178.0
28 TraesCS1A01G312200 chrUn 90.909 77 6 1 2864 2940 42300427 42300352 6.060000e-18 102.0
29 TraesCS1A01G312200 chrUn 90.909 77 6 1 2864 2940 319477656 319477731 6.060000e-18 102.0
30 TraesCS1A01G312200 chr5D 95.055 364 14 4 2 364 212738304 212737944 1.380000e-158 569.0
31 TraesCS1A01G312200 chr5D 94.231 364 18 3 2 364 337746724 337746363 1.390000e-153 553.0
32 TraesCS1A01G312200 chr5D 94.183 361 19 2 4 364 446070696 446070338 1.800000e-152 549.0
33 TraesCS1A01G312200 chr5D 93.691 317 15 3 523 835 554400436 554400751 1.440000e-128 470.0
34 TraesCS1A01G312200 chr5D 88.168 262 28 1 3174 3432 498932512 498932251 3.330000e-80 309.0
35 TraesCS1A01G312200 chr5D 87.405 262 30 1 3174 3432 501713622 501713361 7.200000e-77 298.0
36 TraesCS1A01G312200 chr2A 95.000 360 15 3 2 361 450131 450487 2.310000e-156 562.0
37 TraesCS1A01G312200 chr2D 94.722 360 18 1 2 361 152889779 152890137 2.990000e-155 558.0
38 TraesCS1A01G312200 chr2D 81.562 461 62 14 2187 2631 41912457 41912004 3.260000e-95 359.0
39 TraesCS1A01G312200 chr2D 85.465 344 33 8 3062 3388 41911779 41911436 3.280000e-90 342.0
40 TraesCS1A01G312200 chr2D 86.667 165 21 1 354 518 644290126 644290289 7.570000e-42 182.0
41 TraesCS1A01G312200 chr4D 94.215 363 20 1 2 364 95684091 95683730 1.390000e-153 553.0
42 TraesCS1A01G312200 chr4D 93.939 363 20 2 2 364 96189462 96189102 6.480000e-152 547.0
43 TraesCS1A01G312200 chr3D 94.444 360 18 2 2 361 3316139 3316496 1.390000e-153 553.0
44 TraesCS1A01G312200 chr7D 94.215 363 17 3 2 364 130381148 130380790 5.010000e-153 551.0
45 TraesCS1A01G312200 chr6D 94.375 320 15 1 521 837 365722533 365722852 3.980000e-134 488.0
46 TraesCS1A01G312200 chr6D 86.503 163 20 2 359 520 305001292 305001453 9.790000e-41 178.0
47 TraesCS1A01G312200 chr5A 94.357 319 14 2 520 835 566644257 566644574 1.430000e-133 486.0
48 TraesCS1A01G312200 chr5A 80.519 385 56 9 3063 3430 207666545 207666927 9.380000e-71 278.0
49 TraesCS1A01G312200 chr5A 85.714 161 23 0 358 518 492891685 492891525 1.640000e-38 171.0
50 TraesCS1A01G312200 chr5B 81.818 616 70 23 2038 2625 202952523 202953124 2.400000e-131 479.0
51 TraesCS1A01G312200 chr5B 93.498 323 16 3 519 837 84937054 84937375 3.100000e-130 475.0
52 TraesCS1A01G312200 chr5B 84.110 472 64 6 1581 2047 202943990 202944455 2.430000e-121 446.0
53 TraesCS1A01G312200 chr6A 93.272 327 16 3 520 841 47682047 47682372 8.620000e-131 477.0
54 TraesCS1A01G312200 chr7B 93.438 320 18 1 523 839 106574572 106574891 4.010000e-129 472.0
55 TraesCS1A01G312200 chr7B 76.896 844 150 32 1063 1875 378349390 378350219 1.460000e-118 436.0
56 TraesCS1A01G312200 chr1B 93.396 318 18 1 521 835 230032442 230032759 5.190000e-128 468.0
57 TraesCS1A01G312200 chr1B 92.879 323 20 1 518 837 308509341 308509019 1.870000e-127 466.0
58 TraesCS1A01G312200 chr7A 84.337 166 26 0 353 518 18295706 18295541 2.740000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G312200 chr1A 504218115 504221546 3431 False 6338.000000 6338 100.000000 1 3432 1 chr1A.!!$F1 3431
1 TraesCS1A01G312200 chr2B 41493448 41496099 2651 False 1941.500000 3288 93.005000 835 3432 2 chr2B.!!$F1 2597
2 TraesCS1A01G312200 chr2B 449678339 449680362 2023 True 627.666667 1561 85.241333 358 3028 3 chr2B.!!$R1 2670
3 TraesCS1A01G312200 chr1D 23835689 23838460 2771 False 1296.000000 3070 92.545333 355 3432 3 chr1D.!!$F2 3077
4 TraesCS1A01G312200 chr1D 209738562 209739620 1058 True 913.000000 913 82.778000 1581 2625 1 chr1D.!!$R1 1044
5 TraesCS1A01G312200 chr3A 211047979 211050413 2434 True 839.900000 2608 92.008750 947 3367 4 chr3A.!!$R1 2420
6 TraesCS1A01G312200 chrUn 42299760 42301762 2002 True 433.800000 1216 87.519200 1316 3432 5 chrUn.!!$R3 2116
7 TraesCS1A01G312200 chrUn 319476321 319478323 2002 False 433.800000 1216 87.460400 1316 3432 5 chrUn.!!$F2 2116
8 TraesCS1A01G312200 chr2D 41911436 41912457 1021 True 350.500000 359 83.513500 2187 3388 2 chr2D.!!$R1 1201
9 TraesCS1A01G312200 chr5B 202952523 202953124 601 False 479.000000 479 81.818000 2038 2625 1 chr5B.!!$F3 587
10 TraesCS1A01G312200 chr7B 378349390 378350219 829 False 436.000000 436 76.896000 1063 1875 1 chr7B.!!$F2 812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
886 887 0.105039 CCTCATCTGCCTCCGTTACC 59.895 60.0 0.0 0.0 0.0 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2613 2802 0.109319 GTTTACACAAGCCCATGCGG 60.109 55.0 0.0 0.0 44.33 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.531283 ATTGGTTTGTGCGGTGCA 58.469 50.000 0.00 0.00 35.60 4.57
18 19 1.363443 ATTGGTTTGTGCGGTGCAG 59.637 52.632 0.00 0.00 40.08 4.41
19 20 2.086251 ATTGGTTTGTGCGGTGCAGG 62.086 55.000 0.00 0.00 40.08 4.85
20 21 2.904866 GGTTTGTGCGGTGCAGGA 60.905 61.111 0.00 0.00 40.08 3.86
21 22 2.331451 GTTTGTGCGGTGCAGGAC 59.669 61.111 0.00 0.00 40.08 3.85
22 23 2.124529 TTTGTGCGGTGCAGGACA 60.125 55.556 0.00 0.00 40.08 4.02
23 24 2.186160 TTTGTGCGGTGCAGGACAG 61.186 57.895 0.79 0.00 43.10 3.51
24 25 2.601194 TTTGTGCGGTGCAGGACAGA 62.601 55.000 0.00 0.00 43.10 3.41
25 26 2.280797 GTGCGGTGCAGGACAGAA 60.281 61.111 0.00 0.00 40.08 3.02
26 27 1.891919 GTGCGGTGCAGGACAGAAA 60.892 57.895 0.00 0.00 40.08 2.52
27 28 1.891919 TGCGGTGCAGGACAGAAAC 60.892 57.895 0.00 0.00 33.32 2.78
28 29 1.598130 GCGGTGCAGGACAGAAACT 60.598 57.895 0.00 0.00 0.00 2.66
29 30 1.166531 GCGGTGCAGGACAGAAACTT 61.167 55.000 0.00 0.00 0.00 2.66
30 31 1.308998 CGGTGCAGGACAGAAACTTT 58.691 50.000 0.00 0.00 0.00 2.66
31 32 1.676006 CGGTGCAGGACAGAAACTTTT 59.324 47.619 0.00 0.00 0.00 2.27
32 33 2.541588 CGGTGCAGGACAGAAACTTTTG 60.542 50.000 0.00 0.00 0.00 2.44
33 34 2.463876 GTGCAGGACAGAAACTTTTGC 58.536 47.619 0.00 0.00 0.00 3.68
34 35 2.099756 GTGCAGGACAGAAACTTTTGCT 59.900 45.455 0.00 0.00 0.00 3.91
35 36 2.099592 TGCAGGACAGAAACTTTTGCTG 59.900 45.455 0.00 0.00 35.81 4.41
36 37 2.099756 GCAGGACAGAAACTTTTGCTGT 59.900 45.455 0.00 0.00 44.87 4.40
37 38 3.315191 GCAGGACAGAAACTTTTGCTGTA 59.685 43.478 0.00 0.00 42.47 2.74
38 39 4.555511 GCAGGACAGAAACTTTTGCTGTAG 60.556 45.833 0.00 0.00 42.47 2.74
39 40 4.576463 CAGGACAGAAACTTTTGCTGTAGT 59.424 41.667 0.00 0.00 42.47 2.73
40 41 4.576463 AGGACAGAAACTTTTGCTGTAGTG 59.424 41.667 0.00 0.00 42.47 2.74
41 42 4.282873 GACAGAAACTTTTGCTGTAGTGC 58.717 43.478 0.00 0.00 42.47 4.40
42 43 3.694072 ACAGAAACTTTTGCTGTAGTGCA 59.306 39.130 0.00 0.00 40.79 4.57
43 44 4.037690 CAGAAACTTTTGCTGTAGTGCAC 58.962 43.478 9.40 9.40 43.20 4.57
44 45 2.755836 AACTTTTGCTGTAGTGCACG 57.244 45.000 12.01 0.00 43.20 5.34
45 46 1.948104 ACTTTTGCTGTAGTGCACGA 58.052 45.000 12.01 2.52 43.20 4.35
46 47 2.494059 ACTTTTGCTGTAGTGCACGAT 58.506 42.857 12.01 0.00 43.20 3.73
47 48 2.878406 ACTTTTGCTGTAGTGCACGATT 59.122 40.909 12.01 0.00 43.20 3.34
48 49 3.315191 ACTTTTGCTGTAGTGCACGATTT 59.685 39.130 12.01 0.00 43.20 2.17
49 50 3.980646 TTTGCTGTAGTGCACGATTTT 57.019 38.095 12.01 0.00 43.20 1.82
50 51 5.008217 ACTTTTGCTGTAGTGCACGATTTTA 59.992 36.000 12.01 0.00 43.20 1.52
51 52 4.398549 TTGCTGTAGTGCACGATTTTAC 57.601 40.909 12.01 8.66 43.20 2.01
52 53 3.394719 TGCTGTAGTGCACGATTTTACA 58.605 40.909 12.01 12.85 38.12 2.41
53 54 4.000325 TGCTGTAGTGCACGATTTTACAT 59.000 39.130 12.01 0.00 38.12 2.29
54 55 4.454161 TGCTGTAGTGCACGATTTTACATT 59.546 37.500 12.01 0.00 38.12 2.71
55 56 5.049060 TGCTGTAGTGCACGATTTTACATTT 60.049 36.000 12.01 0.00 38.12 2.32
56 57 5.856455 GCTGTAGTGCACGATTTTACATTTT 59.144 36.000 12.01 0.00 0.00 1.82
57 58 6.362283 GCTGTAGTGCACGATTTTACATTTTT 59.638 34.615 12.01 0.00 0.00 1.94
77 78 5.838531 TTTTTACTGGAACGTCAAATGGT 57.161 34.783 0.00 0.00 0.00 3.55
78 79 5.838531 TTTTACTGGAACGTCAAATGGTT 57.161 34.783 0.00 0.00 0.00 3.67
79 80 5.427036 TTTACTGGAACGTCAAATGGTTC 57.573 39.130 0.00 0.00 41.33 3.62
80 81 3.208747 ACTGGAACGTCAAATGGTTCT 57.791 42.857 0.00 0.00 41.67 3.01
81 82 2.878406 ACTGGAACGTCAAATGGTTCTG 59.122 45.455 0.00 1.46 41.67 3.02
82 83 3.138304 CTGGAACGTCAAATGGTTCTGA 58.862 45.455 0.00 0.00 41.67 3.27
83 84 3.750371 TGGAACGTCAAATGGTTCTGAT 58.250 40.909 0.00 0.00 41.67 2.90
84 85 4.141287 TGGAACGTCAAATGGTTCTGATT 58.859 39.130 0.00 0.00 41.67 2.57
85 86 4.215399 TGGAACGTCAAATGGTTCTGATTC 59.785 41.667 0.00 0.00 41.67 2.52
86 87 4.455877 GGAACGTCAAATGGTTCTGATTCT 59.544 41.667 0.00 0.00 41.67 2.40
87 88 5.048713 GGAACGTCAAATGGTTCTGATTCTT 60.049 40.000 0.00 0.00 41.67 2.52
88 89 6.391227 AACGTCAAATGGTTCTGATTCTTT 57.609 33.333 0.00 0.00 0.00 2.52
89 90 6.391227 ACGTCAAATGGTTCTGATTCTTTT 57.609 33.333 0.00 0.00 0.00 2.27
90 91 6.805713 ACGTCAAATGGTTCTGATTCTTTTT 58.194 32.000 0.00 0.00 0.00 1.94
91 92 6.697019 ACGTCAAATGGTTCTGATTCTTTTTG 59.303 34.615 0.00 0.00 0.00 2.44
92 93 6.346040 CGTCAAATGGTTCTGATTCTTTTTGC 60.346 38.462 0.00 0.00 0.00 3.68
93 94 6.479660 GTCAAATGGTTCTGATTCTTTTTGCA 59.520 34.615 0.00 0.00 0.00 4.08
94 95 6.479660 TCAAATGGTTCTGATTCTTTTTGCAC 59.520 34.615 0.00 0.00 0.00 4.57
95 96 5.796424 ATGGTTCTGATTCTTTTTGCACT 57.204 34.783 0.00 0.00 0.00 4.40
96 97 4.935702 TGGTTCTGATTCTTTTTGCACTG 58.064 39.130 0.00 0.00 0.00 3.66
97 98 4.402155 TGGTTCTGATTCTTTTTGCACTGT 59.598 37.500 0.00 0.00 0.00 3.55
98 99 4.978580 GGTTCTGATTCTTTTTGCACTGTC 59.021 41.667 0.00 0.00 0.00 3.51
99 100 5.221126 GGTTCTGATTCTTTTTGCACTGTCT 60.221 40.000 0.00 0.00 0.00 3.41
100 101 6.268566 GTTCTGATTCTTTTTGCACTGTCTT 58.731 36.000 0.00 0.00 0.00 3.01
101 102 5.824429 TCTGATTCTTTTTGCACTGTCTTG 58.176 37.500 0.00 0.00 0.00 3.02
102 103 5.589855 TCTGATTCTTTTTGCACTGTCTTGA 59.410 36.000 0.00 0.00 0.00 3.02
103 104 6.263842 TCTGATTCTTTTTGCACTGTCTTGAT 59.736 34.615 0.00 0.00 0.00 2.57
104 105 6.210796 TGATTCTTTTTGCACTGTCTTGATG 58.789 36.000 0.00 0.00 0.00 3.07
105 106 5.581126 TTCTTTTTGCACTGTCTTGATGT 57.419 34.783 0.00 0.00 0.00 3.06
106 107 6.691754 TTCTTTTTGCACTGTCTTGATGTA 57.308 33.333 0.00 0.00 0.00 2.29
107 108 6.060028 TCTTTTTGCACTGTCTTGATGTAC 57.940 37.500 0.00 0.00 0.00 2.90
108 109 5.588246 TCTTTTTGCACTGTCTTGATGTACA 59.412 36.000 0.00 0.00 0.00 2.90
109 110 5.826601 TTTTGCACTGTCTTGATGTACAA 57.173 34.783 0.00 0.00 36.97 2.41
110 111 5.826601 TTTGCACTGTCTTGATGTACAAA 57.173 34.783 0.00 0.00 38.08 2.83
111 112 6.389830 TTTGCACTGTCTTGATGTACAAAT 57.610 33.333 0.00 0.00 38.08 2.32
112 113 6.389830 TTGCACTGTCTTGATGTACAAATT 57.610 33.333 0.00 0.00 38.08 1.82
113 114 5.761003 TGCACTGTCTTGATGTACAAATTG 58.239 37.500 0.00 0.00 38.08 2.32
114 115 5.299028 TGCACTGTCTTGATGTACAAATTGT 59.701 36.000 3.43 3.43 38.08 2.71
115 116 6.183360 TGCACTGTCTTGATGTACAAATTGTT 60.183 34.615 3.17 0.00 38.08 2.83
116 117 6.697019 GCACTGTCTTGATGTACAAATTGTTT 59.303 34.615 3.17 0.00 38.08 2.83
117 118 7.860373 GCACTGTCTTGATGTACAAATTGTTTA 59.140 33.333 3.17 0.00 38.08 2.01
118 119 9.897744 CACTGTCTTGATGTACAAATTGTTTAT 57.102 29.630 3.17 0.00 38.08 1.40
119 120 9.897744 ACTGTCTTGATGTACAAATTGTTTATG 57.102 29.630 3.17 0.00 38.08 1.90
120 121 9.897744 CTGTCTTGATGTACAAATTGTTTATGT 57.102 29.630 3.17 0.00 38.08 2.29
135 136 9.566432 AATTGTTTATGTTTCCTAATTTTGGCA 57.434 25.926 0.00 0.00 0.00 4.92
136 137 8.600449 TTGTTTATGTTTCCTAATTTTGGCAG 57.400 30.769 0.00 0.00 0.00 4.85
137 138 7.957002 TGTTTATGTTTCCTAATTTTGGCAGA 58.043 30.769 0.00 0.00 0.00 4.26
138 139 8.424918 TGTTTATGTTTCCTAATTTTGGCAGAA 58.575 29.630 0.00 0.00 0.00 3.02
139 140 9.435688 GTTTATGTTTCCTAATTTTGGCAGAAT 57.564 29.630 0.00 0.00 0.00 2.40
144 145 9.651913 TGTTTCCTAATTTTGGCAGAATTTATC 57.348 29.630 19.46 7.30 0.00 1.75
145 146 9.651913 GTTTCCTAATTTTGGCAGAATTTATCA 57.348 29.630 19.46 2.94 0.00 2.15
175 176 9.857656 ATCATAAGTATGGTGAATGTTCAGATT 57.142 29.630 0.00 0.00 33.58 2.40
176 177 9.112725 TCATAAGTATGGTGAATGTTCAGATTG 57.887 33.333 0.00 0.00 33.58 2.67
177 178 8.896744 CATAAGTATGGTGAATGTTCAGATTGT 58.103 33.333 0.00 0.00 37.98 2.71
178 179 7.765695 AAGTATGGTGAATGTTCAGATTGTT 57.234 32.000 0.00 0.00 37.98 2.83
179 180 8.862325 AAGTATGGTGAATGTTCAGATTGTTA 57.138 30.769 0.00 0.00 37.98 2.41
180 181 8.268850 AGTATGGTGAATGTTCAGATTGTTAC 57.731 34.615 0.00 0.00 37.98 2.50
181 182 7.882791 AGTATGGTGAATGTTCAGATTGTTACA 59.117 33.333 0.00 0.00 37.98 2.41
182 183 6.558771 TGGTGAATGTTCAGATTGTTACAG 57.441 37.500 0.00 0.00 37.98 2.74
183 184 6.295249 TGGTGAATGTTCAGATTGTTACAGA 58.705 36.000 0.00 0.00 37.98 3.41
184 185 6.204688 TGGTGAATGTTCAGATTGTTACAGAC 59.795 38.462 0.00 0.00 37.98 3.51
185 186 6.428159 GGTGAATGTTCAGATTGTTACAGACT 59.572 38.462 0.00 0.00 37.98 3.24
186 187 7.293745 GTGAATGTTCAGATTGTTACAGACTG 58.706 38.462 0.00 0.00 37.98 3.51
187 188 6.992123 TGAATGTTCAGATTGTTACAGACTGT 59.008 34.615 13.68 13.68 32.50 3.55
188 189 7.498900 TGAATGTTCAGATTGTTACAGACTGTT 59.501 33.333 14.50 0.00 32.50 3.16
189 190 6.844696 TGTTCAGATTGTTACAGACTGTTC 57.155 37.500 14.50 4.73 0.00 3.18
190 191 6.582636 TGTTCAGATTGTTACAGACTGTTCT 58.417 36.000 14.50 7.17 0.00 3.01
191 192 7.722363 TGTTCAGATTGTTACAGACTGTTCTA 58.278 34.615 14.50 5.38 0.00 2.10
192 193 8.367911 TGTTCAGATTGTTACAGACTGTTCTAT 58.632 33.333 14.50 9.73 0.00 1.98
193 194 9.209175 GTTCAGATTGTTACAGACTGTTCTATT 57.791 33.333 14.50 0.00 0.00 1.73
194 195 9.778741 TTCAGATTGTTACAGACTGTTCTATTT 57.221 29.630 14.50 3.38 0.00 1.40
195 196 9.778741 TCAGATTGTTACAGACTGTTCTATTTT 57.221 29.630 14.50 1.68 0.00 1.82
200 201 8.725405 TGTTACAGACTGTTCTATTTTTGACA 57.275 30.769 14.50 0.00 0.00 3.58
201 202 8.826710 TGTTACAGACTGTTCTATTTTTGACAG 58.173 33.333 14.50 0.00 0.00 3.51
202 203 9.042008 GTTACAGACTGTTCTATTTTTGACAGA 57.958 33.333 14.50 0.00 0.00 3.41
203 204 9.778741 TTACAGACTGTTCTATTTTTGACAGAT 57.221 29.630 14.50 0.00 0.00 2.90
204 205 8.682936 ACAGACTGTTCTATTTTTGACAGATT 57.317 30.769 1.07 0.00 0.00 2.40
205 206 8.778358 ACAGACTGTTCTATTTTTGACAGATTC 58.222 33.333 1.07 0.00 0.00 2.52
206 207 8.997323 CAGACTGTTCTATTTTTGACAGATTCT 58.003 33.333 9.10 0.60 0.00 2.40
207 208 8.997323 AGACTGTTCTATTTTTGACAGATTCTG 58.003 33.333 12.17 12.17 37.52 3.02
209 210 9.125026 ACTGTTCTATTTTTGACAGATTCTGTT 57.875 29.630 19.88 6.25 45.44 3.16
210 211 9.956720 CTGTTCTATTTTTGACAGATTCTGTTT 57.043 29.630 19.88 0.00 45.44 2.83
217 218 7.467557 TTTTGACAGATTCTGTTTTTGATGC 57.532 32.000 19.88 5.94 45.44 3.91
218 219 5.771153 TGACAGATTCTGTTTTTGATGCA 57.229 34.783 19.88 8.35 45.44 3.96
219 220 6.335471 TGACAGATTCTGTTTTTGATGCAT 57.665 33.333 19.88 0.00 45.44 3.96
220 221 7.451501 TGACAGATTCTGTTTTTGATGCATA 57.548 32.000 19.88 0.00 45.44 3.14
221 222 7.532571 TGACAGATTCTGTTTTTGATGCATAG 58.467 34.615 19.88 0.00 45.44 2.23
222 223 7.175467 TGACAGATTCTGTTTTTGATGCATAGT 59.825 33.333 19.88 0.00 45.44 2.12
223 224 7.889469 ACAGATTCTGTTTTTGATGCATAGTT 58.111 30.769 13.61 0.00 42.59 2.24
224 225 8.362639 ACAGATTCTGTTTTTGATGCATAGTTT 58.637 29.630 13.61 0.00 42.59 2.66
225 226 8.644619 CAGATTCTGTTTTTGATGCATAGTTTG 58.355 33.333 0.00 0.00 0.00 2.93
242 243 8.356533 CATAGTTTGCTTGTTTTGATGAAACT 57.643 30.769 0.00 0.00 46.25 2.66
243 244 9.462174 CATAGTTTGCTTGTTTTGATGAAACTA 57.538 29.630 0.00 0.00 46.25 2.24
245 246 8.579682 AGTTTGCTTGTTTTGATGAAACTATC 57.420 30.769 0.00 0.00 46.25 2.08
246 247 8.196771 AGTTTGCTTGTTTTGATGAAACTATCA 58.803 29.630 0.00 0.00 46.25 2.15
247 248 8.816144 GTTTGCTTGTTTTGATGAAACTATCAA 58.184 29.630 0.00 0.00 46.25 2.57
248 249 9.545105 TTTGCTTGTTTTGATGAAACTATCAAT 57.455 25.926 0.00 0.00 46.25 2.57
249 250 9.545105 TTGCTTGTTTTGATGAAACTATCAATT 57.455 25.926 0.00 0.00 46.25 2.32
250 251 9.545105 TGCTTGTTTTGATGAAACTATCAATTT 57.455 25.926 0.00 0.00 46.25 1.82
269 270 9.812347 ATCAATTTATATCAGTGGATTAAGCCA 57.188 29.630 8.76 8.76 34.89 4.75
270 271 9.812347 TCAATTTATATCAGTGGATTAAGCCAT 57.188 29.630 16.84 1.92 40.68 4.40
271 272 9.850628 CAATTTATATCAGTGGATTAAGCCATG 57.149 33.333 16.84 14.45 40.68 3.66
272 273 9.812347 AATTTATATCAGTGGATTAAGCCATGA 57.188 29.630 16.84 18.81 40.68 3.07
273 274 9.812347 ATTTATATCAGTGGATTAAGCCATGAA 57.188 29.630 16.84 4.58 40.68 2.57
274 275 9.639563 TTTATATCAGTGGATTAAGCCATGAAA 57.360 29.630 16.84 9.04 40.68 2.69
275 276 9.639563 TTATATCAGTGGATTAAGCCATGAAAA 57.360 29.630 16.84 12.44 40.68 2.29
276 277 6.855763 ATCAGTGGATTAAGCCATGAAAAA 57.144 33.333 16.84 0.00 40.68 1.94
277 278 6.271488 TCAGTGGATTAAGCCATGAAAAAG 57.729 37.500 16.84 1.70 40.68 2.27
278 279 5.774690 TCAGTGGATTAAGCCATGAAAAAGT 59.225 36.000 16.84 0.00 40.68 2.66
279 280 6.267471 TCAGTGGATTAAGCCATGAAAAAGTT 59.733 34.615 16.84 0.00 40.68 2.66
280 281 7.450014 TCAGTGGATTAAGCCATGAAAAAGTTA 59.550 33.333 16.84 0.00 40.68 2.24
281 282 8.253113 CAGTGGATTAAGCCATGAAAAAGTTAT 58.747 33.333 16.84 0.00 40.68 1.89
282 283 9.474313 AGTGGATTAAGCCATGAAAAAGTTATA 57.526 29.630 16.84 0.00 40.68 0.98
301 302 9.884636 AAGTTATATTACAGTAGACACAATGCA 57.115 29.630 0.00 0.00 0.00 3.96
302 303 9.884636 AGTTATATTACAGTAGACACAATGCAA 57.115 29.630 0.00 0.00 0.00 4.08
306 307 6.935741 TTACAGTAGACACAATGCAAAAGT 57.064 33.333 0.00 0.00 0.00 2.66
307 308 8.615878 ATTACAGTAGACACAATGCAAAAGTA 57.384 30.769 0.00 0.00 0.00 2.24
308 309 6.935741 ACAGTAGACACAATGCAAAAGTAA 57.064 33.333 0.00 0.00 0.00 2.24
309 310 7.328277 ACAGTAGACACAATGCAAAAGTAAA 57.672 32.000 0.00 0.00 0.00 2.01
310 311 7.767261 ACAGTAGACACAATGCAAAAGTAAAA 58.233 30.769 0.00 0.00 0.00 1.52
311 312 8.413229 ACAGTAGACACAATGCAAAAGTAAAAT 58.587 29.630 0.00 0.00 0.00 1.82
312 313 9.891828 CAGTAGACACAATGCAAAAGTAAAATA 57.108 29.630 0.00 0.00 0.00 1.40
316 317 9.979578 AGACACAATGCAAAAGTAAAATATGAA 57.020 25.926 0.00 0.00 0.00 2.57
325 326 9.328721 GCAAAAGTAAAATATGAATTGGTTTGC 57.671 29.630 0.00 0.00 0.00 3.68
329 330 9.995003 AAGTAAAATATGAATTGGTTTGCAAGA 57.005 25.926 0.00 0.00 0.00 3.02
330 331 9.643693 AGTAAAATATGAATTGGTTTGCAAGAG 57.356 29.630 0.00 0.00 0.00 2.85
331 332 9.423061 GTAAAATATGAATTGGTTTGCAAGAGT 57.577 29.630 0.00 0.00 0.00 3.24
333 334 8.986477 AAATATGAATTGGTTTGCAAGAGTAC 57.014 30.769 0.00 0.00 0.00 2.73
334 335 7.944729 ATATGAATTGGTTTGCAAGAGTACT 57.055 32.000 0.00 0.00 0.00 2.73
335 336 6.655078 ATGAATTGGTTTGCAAGAGTACTT 57.345 33.333 0.00 0.00 36.73 2.24
336 337 7.759489 ATGAATTGGTTTGCAAGAGTACTTA 57.241 32.000 0.00 0.00 34.70 2.24
337 338 7.202016 TGAATTGGTTTGCAAGAGTACTTAG 57.798 36.000 0.00 0.00 34.70 2.18
338 339 6.995686 TGAATTGGTTTGCAAGAGTACTTAGA 59.004 34.615 0.00 0.00 34.70 2.10
339 340 7.173218 TGAATTGGTTTGCAAGAGTACTTAGAG 59.827 37.037 0.00 0.00 34.70 2.43
340 341 5.546621 TGGTTTGCAAGAGTACTTAGAGT 57.453 39.130 0.00 0.00 34.70 3.24
341 342 5.297547 TGGTTTGCAAGAGTACTTAGAGTG 58.702 41.667 0.00 0.00 34.70 3.51
342 343 4.691216 GGTTTGCAAGAGTACTTAGAGTGG 59.309 45.833 0.00 0.00 34.70 4.00
343 344 5.298347 GTTTGCAAGAGTACTTAGAGTGGT 58.702 41.667 0.00 0.00 34.70 4.16
344 345 4.521130 TGCAAGAGTACTTAGAGTGGTG 57.479 45.455 0.00 0.00 34.70 4.17
345 346 4.149598 TGCAAGAGTACTTAGAGTGGTGA 58.850 43.478 0.00 0.00 34.70 4.02
346 347 4.772624 TGCAAGAGTACTTAGAGTGGTGAT 59.227 41.667 0.00 0.00 34.70 3.06
347 348 5.246203 TGCAAGAGTACTTAGAGTGGTGATT 59.754 40.000 0.00 0.00 34.70 2.57
348 349 6.166982 GCAAGAGTACTTAGAGTGGTGATTT 58.833 40.000 0.00 0.00 34.70 2.17
349 350 6.091441 GCAAGAGTACTTAGAGTGGTGATTTG 59.909 42.308 0.00 0.00 34.70 2.32
350 351 5.725362 AGAGTACTTAGAGTGGTGATTTGC 58.275 41.667 0.00 0.00 0.00 3.68
351 352 5.482175 AGAGTACTTAGAGTGGTGATTTGCT 59.518 40.000 0.00 0.00 0.00 3.91
352 353 6.014156 AGAGTACTTAGAGTGGTGATTTGCTT 60.014 38.462 0.00 0.00 0.00 3.91
353 354 6.534634 AGTACTTAGAGTGGTGATTTGCTTT 58.465 36.000 0.00 0.00 0.00 3.51
421 422 2.092267 ACATGCAGCCTATCCACATCAA 60.092 45.455 0.00 0.00 0.00 2.57
422 423 3.154710 CATGCAGCCTATCCACATCAAT 58.845 45.455 0.00 0.00 0.00 2.57
425 426 4.989277 TGCAGCCTATCCACATCAATAAT 58.011 39.130 0.00 0.00 0.00 1.28
438 439 6.039605 CCACATCAATAATACTGCCACATCAA 59.960 38.462 0.00 0.00 0.00 2.57
439 440 7.255695 CCACATCAATAATACTGCCACATCAAT 60.256 37.037 0.00 0.00 0.00 2.57
459 460 7.994425 TCAATGTTTCATTAGAGGCTTACAA 57.006 32.000 0.00 0.00 0.00 2.41
485 486 2.415512 GACCCGTCACAATAGAAAGCAC 59.584 50.000 0.00 0.00 0.00 4.40
520 521 0.325860 TTACTGCCGGTAGGACCCAT 60.326 55.000 24.20 3.85 41.02 4.00
521 522 0.557238 TACTGCCGGTAGGACCCATA 59.443 55.000 24.20 2.79 41.02 2.74
522 523 0.325860 ACTGCCGGTAGGACCCATAA 60.326 55.000 24.20 0.00 41.02 1.90
523 524 0.393077 CTGCCGGTAGGACCCATAAG 59.607 60.000 12.40 0.00 41.02 1.73
524 525 1.052124 TGCCGGTAGGACCCATAAGG 61.052 60.000 1.90 0.00 41.02 2.69
525 526 1.752833 CCGGTAGGACCCATAAGGC 59.247 63.158 0.00 0.00 40.58 4.35
526 527 0.763223 CCGGTAGGACCCATAAGGCT 60.763 60.000 0.00 0.00 40.58 4.58
527 528 1.481802 CCGGTAGGACCCATAAGGCTA 60.482 57.143 0.00 0.00 40.58 3.93
528 529 1.617357 CGGTAGGACCCATAAGGCTAC 59.383 57.143 0.00 0.00 40.58 3.58
529 530 2.755549 CGGTAGGACCCATAAGGCTACT 60.756 54.545 0.00 0.00 40.58 2.57
530 531 3.315596 GGTAGGACCCATAAGGCTACTT 58.684 50.000 0.00 0.00 40.58 2.24
531 532 3.324268 GGTAGGACCCATAAGGCTACTTC 59.676 52.174 0.00 0.00 40.58 3.01
532 533 2.409570 AGGACCCATAAGGCTACTTCC 58.590 52.381 0.00 0.00 40.58 3.46
533 534 2.124411 GGACCCATAAGGCTACTTCCA 58.876 52.381 0.00 0.00 40.58 3.53
534 535 2.508300 GGACCCATAAGGCTACTTCCAA 59.492 50.000 0.00 0.00 40.58 3.53
535 536 3.138468 GGACCCATAAGGCTACTTCCAAT 59.862 47.826 0.00 0.00 40.58 3.16
536 537 4.137543 GACCCATAAGGCTACTTCCAATG 58.862 47.826 0.00 0.00 40.58 2.82
537 538 2.887152 CCCATAAGGCTACTTCCAATGC 59.113 50.000 0.00 0.00 38.14 3.56
538 539 3.554934 CCATAAGGCTACTTCCAATGCA 58.445 45.455 0.00 0.00 38.14 3.96
539 540 4.147321 CCATAAGGCTACTTCCAATGCAT 58.853 43.478 0.00 0.00 38.14 3.96
540 541 4.022589 CCATAAGGCTACTTCCAATGCATG 60.023 45.833 0.00 0.00 38.14 4.06
557 558 2.569059 CATGGGTGCTTAGATGAGGTG 58.431 52.381 0.00 0.00 0.00 4.00
558 559 0.253044 TGGGTGCTTAGATGAGGTGC 59.747 55.000 0.00 0.00 0.00 5.01
559 560 0.543749 GGGTGCTTAGATGAGGTGCT 59.456 55.000 0.00 0.00 0.00 4.40
560 561 1.762957 GGGTGCTTAGATGAGGTGCTA 59.237 52.381 0.00 0.00 0.00 3.49
561 562 2.170607 GGGTGCTTAGATGAGGTGCTAA 59.829 50.000 0.00 0.00 0.00 3.09
562 563 3.462021 GGTGCTTAGATGAGGTGCTAAG 58.538 50.000 0.00 0.00 43.95 2.18
584 585 7.396540 AAGCACATTAAATAGCTTAGCAACT 57.603 32.000 7.07 0.00 44.73 3.16
585 586 8.506168 AAGCACATTAAATAGCTTAGCAACTA 57.494 30.769 7.07 0.00 44.73 2.24
586 587 8.682936 AGCACATTAAATAGCTTAGCAACTAT 57.317 30.769 7.07 0.00 32.52 2.12
587 588 9.778741 AGCACATTAAATAGCTTAGCAACTATA 57.221 29.630 7.07 0.00 32.52 1.31
588 589 9.813080 GCACATTAAATAGCTTAGCAACTATAC 57.187 33.333 7.07 0.00 0.00 1.47
592 593 9.945904 ATTAAATAGCTTAGCAACTATACTCCC 57.054 33.333 7.07 0.00 0.00 4.30
593 594 6.361768 AATAGCTTAGCAACTATACTCCCC 57.638 41.667 7.07 0.00 0.00 4.81
594 595 3.654273 AGCTTAGCAACTATACTCCCCA 58.346 45.455 7.07 0.00 0.00 4.96
595 596 4.037927 AGCTTAGCAACTATACTCCCCAA 58.962 43.478 7.07 0.00 0.00 4.12
596 597 4.660771 AGCTTAGCAACTATACTCCCCAAT 59.339 41.667 7.07 0.00 0.00 3.16
597 598 4.757149 GCTTAGCAACTATACTCCCCAATG 59.243 45.833 0.00 0.00 0.00 2.82
598 599 3.214696 AGCAACTATACTCCCCAATGC 57.785 47.619 0.00 0.00 0.00 3.56
599 600 2.509548 AGCAACTATACTCCCCAATGCA 59.490 45.455 0.00 0.00 35.11 3.96
600 601 3.139025 AGCAACTATACTCCCCAATGCAT 59.861 43.478 0.00 0.00 35.11 3.96
601 602 4.350816 AGCAACTATACTCCCCAATGCATA 59.649 41.667 0.00 0.00 35.11 3.14
602 603 4.697352 GCAACTATACTCCCCAATGCATAG 59.303 45.833 0.00 0.00 33.00 2.23
603 604 5.248640 CAACTATACTCCCCAATGCATAGG 58.751 45.833 0.00 3.90 0.00 2.57
604 605 4.503398 ACTATACTCCCCAATGCATAGGT 58.497 43.478 13.23 3.95 0.00 3.08
605 606 3.795688 ATACTCCCCAATGCATAGGTG 57.204 47.619 13.23 11.31 0.00 4.00
606 607 1.298953 ACTCCCCAATGCATAGGTGT 58.701 50.000 13.23 11.84 0.00 4.16
607 608 1.640670 ACTCCCCAATGCATAGGTGTT 59.359 47.619 13.23 0.00 0.00 3.32
608 609 2.042979 ACTCCCCAATGCATAGGTGTTT 59.957 45.455 13.23 0.00 0.00 2.83
609 610 3.268334 ACTCCCCAATGCATAGGTGTTTA 59.732 43.478 13.23 0.00 0.00 2.01
610 611 3.885297 CTCCCCAATGCATAGGTGTTTAG 59.115 47.826 13.23 0.03 0.00 1.85
611 612 2.362077 CCCCAATGCATAGGTGTTTAGC 59.638 50.000 13.23 0.00 0.00 3.09
612 613 3.290710 CCCAATGCATAGGTGTTTAGCT 58.709 45.455 0.00 0.00 38.41 3.32
613 614 3.701040 CCCAATGCATAGGTGTTTAGCTT 59.299 43.478 0.00 0.00 35.90 3.74
614 615 4.160252 CCCAATGCATAGGTGTTTAGCTTT 59.840 41.667 0.00 0.00 35.90 3.51
615 616 5.337491 CCCAATGCATAGGTGTTTAGCTTTT 60.337 40.000 0.00 0.00 35.90 2.27
616 617 5.577945 CCAATGCATAGGTGTTTAGCTTTTG 59.422 40.000 0.00 0.00 35.90 2.44
617 618 4.782019 TGCATAGGTGTTTAGCTTTTGG 57.218 40.909 0.00 0.00 35.90 3.28
618 619 4.148838 TGCATAGGTGTTTAGCTTTTGGT 58.851 39.130 0.00 0.00 35.90 3.67
619 620 4.586841 TGCATAGGTGTTTAGCTTTTGGTT 59.413 37.500 0.00 0.00 35.90 3.67
620 621 4.923281 GCATAGGTGTTTAGCTTTTGGTTG 59.077 41.667 0.00 0.00 35.90 3.77
621 622 3.452755 AGGTGTTTAGCTTTTGGTTGC 57.547 42.857 0.00 0.00 0.00 4.17
622 623 3.031013 AGGTGTTTAGCTTTTGGTTGCT 58.969 40.909 0.00 0.00 42.67 3.91
623 624 4.211920 AGGTGTTTAGCTTTTGGTTGCTA 58.788 39.130 0.00 0.00 40.35 3.49
624 625 4.647399 AGGTGTTTAGCTTTTGGTTGCTAA 59.353 37.500 0.00 3.68 46.14 3.09
631 632 4.505313 GCTTTTGGTTGCTAAGCTTACT 57.495 40.909 0.86 0.00 40.75 2.24
632 633 4.871513 GCTTTTGGTTGCTAAGCTTACTT 58.128 39.130 0.86 0.00 40.75 2.24
633 634 4.917998 GCTTTTGGTTGCTAAGCTTACTTC 59.082 41.667 0.86 0.00 40.75 3.01
634 635 5.507315 GCTTTTGGTTGCTAAGCTTACTTCA 60.507 40.000 0.86 0.00 40.75 3.02
635 636 6.648879 TTTTGGTTGCTAAGCTTACTTCAT 57.351 33.333 0.86 0.00 37.33 2.57
636 637 6.648879 TTTGGTTGCTAAGCTTACTTCATT 57.351 33.333 0.86 0.00 37.33 2.57
637 638 6.648879 TTGGTTGCTAAGCTTACTTCATTT 57.351 33.333 0.86 0.00 37.33 2.32
638 639 7.753309 TTGGTTGCTAAGCTTACTTCATTTA 57.247 32.000 0.86 0.00 37.33 1.40
639 640 7.753309 TGGTTGCTAAGCTTACTTCATTTAA 57.247 32.000 0.86 0.00 37.33 1.52
640 641 8.348285 TGGTTGCTAAGCTTACTTCATTTAAT 57.652 30.769 0.86 0.00 37.33 1.40
641 642 8.243426 TGGTTGCTAAGCTTACTTCATTTAATG 58.757 33.333 0.86 0.00 37.33 1.90
642 643 8.458843 GGTTGCTAAGCTTACTTCATTTAATGA 58.541 33.333 0.86 3.20 37.33 2.57
663 664 7.928307 ATGATTTAGCAACTAAAGCTCTTCA 57.072 32.000 14.32 8.95 41.23 3.02
664 665 7.928307 TGATTTAGCAACTAAAGCTCTTCAT 57.072 32.000 14.32 0.00 41.23 2.57
665 666 7.755591 TGATTTAGCAACTAAAGCTCTTCATG 58.244 34.615 14.32 0.00 41.23 3.07
666 667 7.391554 TGATTTAGCAACTAAAGCTCTTCATGT 59.608 33.333 14.32 0.00 41.23 3.21
667 668 8.792830 ATTTAGCAACTAAAGCTCTTCATGTA 57.207 30.769 6.04 0.00 42.32 2.29
668 669 8.792830 TTTAGCAACTAAAGCTCTTCATGTAT 57.207 30.769 0.00 0.00 42.32 2.29
669 670 8.792830 TTAGCAACTAAAGCTCTTCATGTATT 57.207 30.769 0.00 0.00 42.32 1.89
670 671 7.081526 AGCAACTAAAGCTCTTCATGTATTG 57.918 36.000 0.00 0.00 38.01 1.90
671 672 6.094603 AGCAACTAAAGCTCTTCATGTATTGG 59.905 38.462 0.00 0.00 38.01 3.16
672 673 6.127897 GCAACTAAAGCTCTTCATGTATTGGT 60.128 38.462 0.00 0.00 0.00 3.67
673 674 6.992063 ACTAAAGCTCTTCATGTATTGGTG 57.008 37.500 0.00 0.00 0.00 4.17
674 675 5.882557 ACTAAAGCTCTTCATGTATTGGTGG 59.117 40.000 0.00 0.00 0.00 4.61
675 676 3.287867 AGCTCTTCATGTATTGGTGGG 57.712 47.619 0.00 0.00 0.00 4.61
676 677 2.578021 AGCTCTTCATGTATTGGTGGGT 59.422 45.455 0.00 0.00 0.00 4.51
677 678 3.010584 AGCTCTTCATGTATTGGTGGGTT 59.989 43.478 0.00 0.00 0.00 4.11
678 679 3.763897 GCTCTTCATGTATTGGTGGGTTT 59.236 43.478 0.00 0.00 0.00 3.27
679 680 4.142381 GCTCTTCATGTATTGGTGGGTTTC 60.142 45.833 0.00 0.00 0.00 2.78
680 681 5.255397 TCTTCATGTATTGGTGGGTTTCT 57.745 39.130 0.00 0.00 0.00 2.52
681 682 5.640147 TCTTCATGTATTGGTGGGTTTCTT 58.360 37.500 0.00 0.00 0.00 2.52
682 683 6.074648 TCTTCATGTATTGGTGGGTTTCTTT 58.925 36.000 0.00 0.00 0.00 2.52
683 684 6.553100 TCTTCATGTATTGGTGGGTTTCTTTT 59.447 34.615 0.00 0.00 0.00 2.27
684 685 6.339587 TCATGTATTGGTGGGTTTCTTTTC 57.660 37.500 0.00 0.00 0.00 2.29
685 686 6.074648 TCATGTATTGGTGGGTTTCTTTTCT 58.925 36.000 0.00 0.00 0.00 2.52
686 687 6.553100 TCATGTATTGGTGGGTTTCTTTTCTT 59.447 34.615 0.00 0.00 0.00 2.52
687 688 6.800072 TGTATTGGTGGGTTTCTTTTCTTT 57.200 33.333 0.00 0.00 0.00 2.52
688 689 7.899648 TGTATTGGTGGGTTTCTTTTCTTTA 57.100 32.000 0.00 0.00 0.00 1.85
689 690 8.307582 TGTATTGGTGGGTTTCTTTTCTTTAA 57.692 30.769 0.00 0.00 0.00 1.52
690 691 8.759782 TGTATTGGTGGGTTTCTTTTCTTTAAA 58.240 29.630 0.00 0.00 0.00 1.52
691 692 9.772973 GTATTGGTGGGTTTCTTTTCTTTAAAT 57.227 29.630 0.00 0.00 0.00 1.40
692 693 8.675705 ATTGGTGGGTTTCTTTTCTTTAAATG 57.324 30.769 0.00 0.00 0.00 2.32
693 694 7.189079 TGGTGGGTTTCTTTTCTTTAAATGT 57.811 32.000 0.00 0.00 0.00 2.71
694 695 7.625469 TGGTGGGTTTCTTTTCTTTAAATGTT 58.375 30.769 0.00 0.00 0.00 2.71
695 696 8.103935 TGGTGGGTTTCTTTTCTTTAAATGTTT 58.896 29.630 0.00 0.00 0.00 2.83
696 697 8.952278 GGTGGGTTTCTTTTCTTTAAATGTTTT 58.048 29.630 0.00 0.00 0.00 2.43
697 698 9.767684 GTGGGTTTCTTTTCTTTAAATGTTTTG 57.232 29.630 0.00 0.00 0.00 2.44
698 699 8.454894 TGGGTTTCTTTTCTTTAAATGTTTTGC 58.545 29.630 0.00 0.00 0.00 3.68
699 700 7.913297 GGGTTTCTTTTCTTTAAATGTTTTGCC 59.087 33.333 0.00 0.00 0.00 4.52
700 701 8.673711 GGTTTCTTTTCTTTAAATGTTTTGCCT 58.326 29.630 0.00 0.00 0.00 4.75
703 704 9.541143 TTCTTTTCTTTAAATGTTTTGCCTAGG 57.459 29.630 3.67 3.67 0.00 3.02
704 705 8.700973 TCTTTTCTTTAAATGTTTTGCCTAGGT 58.299 29.630 11.31 0.00 0.00 3.08
705 706 9.325198 CTTTTCTTTAAATGTTTTGCCTAGGTT 57.675 29.630 11.31 0.00 0.00 3.50
706 707 8.880878 TTTCTTTAAATGTTTTGCCTAGGTTC 57.119 30.769 11.31 0.00 0.00 3.62
707 708 7.589958 TCTTTAAATGTTTTGCCTAGGTTCA 57.410 32.000 11.31 0.00 0.00 3.18
708 709 7.430441 TCTTTAAATGTTTTGCCTAGGTTCAC 58.570 34.615 11.31 3.25 0.00 3.18
709 710 3.915437 AATGTTTTGCCTAGGTTCACG 57.085 42.857 11.31 0.00 0.00 4.35
710 711 0.948678 TGTTTTGCCTAGGTTCACGC 59.051 50.000 11.31 0.00 0.00 5.34
711 712 0.110373 GTTTTGCCTAGGTTCACGCG 60.110 55.000 11.31 3.53 0.00 6.01
712 713 1.847890 TTTTGCCTAGGTTCACGCGC 61.848 55.000 11.31 0.00 0.00 6.86
713 714 2.725203 TTTGCCTAGGTTCACGCGCT 62.725 55.000 11.31 0.00 0.00 5.92
714 715 2.434359 GCCTAGGTTCACGCGCTT 60.434 61.111 11.31 0.00 0.00 4.68
715 716 1.153706 GCCTAGGTTCACGCGCTTA 60.154 57.895 11.31 0.00 0.00 3.09
716 717 1.146358 GCCTAGGTTCACGCGCTTAG 61.146 60.000 11.31 0.00 0.00 2.18
717 718 1.146358 CCTAGGTTCACGCGCTTAGC 61.146 60.000 5.73 0.23 43.95 3.09
731 732 3.751621 CGCTTAGCATTGTTTCTTCCTG 58.248 45.455 4.70 0.00 0.00 3.86
732 733 3.426695 CGCTTAGCATTGTTTCTTCCTGG 60.427 47.826 4.70 0.00 0.00 4.45
733 734 3.119352 GCTTAGCATTGTTTCTTCCTGGG 60.119 47.826 0.00 0.00 0.00 4.45
734 735 2.978156 AGCATTGTTTCTTCCTGGGA 57.022 45.000 0.00 0.00 0.00 4.37
735 736 3.463048 AGCATTGTTTCTTCCTGGGAT 57.537 42.857 0.00 0.00 0.00 3.85
736 737 3.359950 AGCATTGTTTCTTCCTGGGATC 58.640 45.455 0.00 0.00 0.00 3.36
737 738 3.091545 GCATTGTTTCTTCCTGGGATCA 58.908 45.455 0.00 0.00 0.00 2.92
738 739 3.119352 GCATTGTTTCTTCCTGGGATCAC 60.119 47.826 0.00 0.00 0.00 3.06
739 740 3.874383 TTGTTTCTTCCTGGGATCACA 57.126 42.857 0.00 0.00 0.00 3.58
740 741 3.874383 TGTTTCTTCCTGGGATCACAA 57.126 42.857 0.00 0.00 0.00 3.33
741 742 3.486383 TGTTTCTTCCTGGGATCACAAC 58.514 45.455 0.00 0.00 0.00 3.32
742 743 3.117701 TGTTTCTTCCTGGGATCACAACA 60.118 43.478 0.00 0.00 0.00 3.33
743 744 2.859165 TCTTCCTGGGATCACAACAC 57.141 50.000 0.00 0.00 0.00 3.32
744 745 2.338809 TCTTCCTGGGATCACAACACT 58.661 47.619 0.00 0.00 0.00 3.55
745 746 2.303022 TCTTCCTGGGATCACAACACTC 59.697 50.000 0.00 0.00 0.00 3.51
746 747 1.728323 TCCTGGGATCACAACACTCA 58.272 50.000 0.00 0.00 0.00 3.41
747 748 2.269023 TCCTGGGATCACAACACTCAT 58.731 47.619 0.00 0.00 0.00 2.90
748 749 2.237143 TCCTGGGATCACAACACTCATC 59.763 50.000 0.00 0.00 0.00 2.92
749 750 2.238144 CCTGGGATCACAACACTCATCT 59.762 50.000 0.00 0.00 0.00 2.90
750 751 3.529533 CTGGGATCACAACACTCATCTC 58.470 50.000 0.00 0.00 0.00 2.75
751 752 3.176411 TGGGATCACAACACTCATCTCT 58.824 45.455 0.00 0.00 0.00 3.10
752 753 3.196469 TGGGATCACAACACTCATCTCTC 59.804 47.826 0.00 0.00 0.00 3.20
753 754 3.450457 GGGATCACAACACTCATCTCTCT 59.550 47.826 0.00 0.00 0.00 3.10
754 755 4.441356 GGGATCACAACACTCATCTCTCTC 60.441 50.000 0.00 0.00 0.00 3.20
755 756 4.441356 GGATCACAACACTCATCTCTCTCC 60.441 50.000 0.00 0.00 0.00 3.71
756 757 3.772387 TCACAACACTCATCTCTCTCCT 58.228 45.455 0.00 0.00 0.00 3.69
757 758 3.761218 TCACAACACTCATCTCTCTCCTC 59.239 47.826 0.00 0.00 0.00 3.71
758 759 3.763360 CACAACACTCATCTCTCTCCTCT 59.237 47.826 0.00 0.00 0.00 3.69
759 760 4.220382 CACAACACTCATCTCTCTCCTCTT 59.780 45.833 0.00 0.00 0.00 2.85
760 761 5.417266 CACAACACTCATCTCTCTCCTCTTA 59.583 44.000 0.00 0.00 0.00 2.10
761 762 6.013379 ACAACACTCATCTCTCTCCTCTTAA 58.987 40.000 0.00 0.00 0.00 1.85
762 763 6.495181 ACAACACTCATCTCTCTCCTCTTAAA 59.505 38.462 0.00 0.00 0.00 1.52
763 764 7.180051 ACAACACTCATCTCTCTCCTCTTAAAT 59.820 37.037 0.00 0.00 0.00 1.40
764 765 8.690884 CAACACTCATCTCTCTCCTCTTAAATA 58.309 37.037 0.00 0.00 0.00 1.40
765 766 8.830915 ACACTCATCTCTCTCCTCTTAAATAA 57.169 34.615 0.00 0.00 0.00 1.40
766 767 8.691797 ACACTCATCTCTCTCCTCTTAAATAAC 58.308 37.037 0.00 0.00 0.00 1.89
767 768 8.690884 CACTCATCTCTCTCCTCTTAAATAACA 58.309 37.037 0.00 0.00 0.00 2.41
768 769 9.432982 ACTCATCTCTCTCCTCTTAAATAACAT 57.567 33.333 0.00 0.00 0.00 2.71
769 770 9.695526 CTCATCTCTCTCCTCTTAAATAACATG 57.304 37.037 0.00 0.00 0.00 3.21
770 771 8.147058 TCATCTCTCTCCTCTTAAATAACATGC 58.853 37.037 0.00 0.00 0.00 4.06
771 772 6.821388 TCTCTCTCCTCTTAAATAACATGCC 58.179 40.000 0.00 0.00 0.00 4.40
772 773 6.384015 TCTCTCTCCTCTTAAATAACATGCCA 59.616 38.462 0.00 0.00 0.00 4.92
773 774 6.349300 TCTCTCCTCTTAAATAACATGCCAC 58.651 40.000 0.00 0.00 0.00 5.01
774 775 6.061022 TCTCCTCTTAAATAACATGCCACA 57.939 37.500 0.00 0.00 0.00 4.17
775 776 6.662755 TCTCCTCTTAAATAACATGCCACAT 58.337 36.000 0.00 0.00 0.00 3.21
776 777 6.767902 TCTCCTCTTAAATAACATGCCACATC 59.232 38.462 0.00 0.00 0.00 3.06
777 778 6.422333 TCCTCTTAAATAACATGCCACATCA 58.578 36.000 0.00 0.00 0.00 3.07
778 779 6.543465 TCCTCTTAAATAACATGCCACATCAG 59.457 38.462 0.00 0.00 0.00 2.90
779 780 6.543465 CCTCTTAAATAACATGCCACATCAGA 59.457 38.462 0.00 0.00 0.00 3.27
780 781 7.230108 CCTCTTAAATAACATGCCACATCAGAT 59.770 37.037 0.00 0.00 0.00 2.90
781 782 8.523915 TCTTAAATAACATGCCACATCAGATT 57.476 30.769 0.00 0.00 0.00 2.40
782 783 8.970020 TCTTAAATAACATGCCACATCAGATTT 58.030 29.630 0.00 0.00 0.00 2.17
783 784 9.590451 CTTAAATAACATGCCACATCAGATTTT 57.410 29.630 0.00 0.00 0.00 1.82
784 785 9.941325 TTAAATAACATGCCACATCAGATTTTT 57.059 25.926 0.00 0.00 0.00 1.94
801 802 3.775261 TTTTTACCTACGTGGAAGGCT 57.225 42.857 0.00 0.00 37.67 4.58
802 803 3.775261 TTTTACCTACGTGGAAGGCTT 57.225 42.857 0.00 0.00 37.67 4.35
803 804 4.888326 TTTTACCTACGTGGAAGGCTTA 57.112 40.909 0.00 0.00 37.67 3.09
804 805 4.460948 TTTACCTACGTGGAAGGCTTAG 57.539 45.455 0.00 0.00 37.67 2.18
805 806 1.934410 ACCTACGTGGAAGGCTTAGT 58.066 50.000 0.00 1.00 37.67 2.24
806 807 3.091633 ACCTACGTGGAAGGCTTAGTA 57.908 47.619 0.00 2.19 37.67 1.82
807 808 2.757314 ACCTACGTGGAAGGCTTAGTAC 59.243 50.000 0.00 0.00 37.67 2.73
808 809 2.100418 CCTACGTGGAAGGCTTAGTACC 59.900 54.545 0.00 0.00 38.35 3.34
809 810 1.934410 ACGTGGAAGGCTTAGTACCT 58.066 50.000 0.00 0.00 40.02 3.08
810 811 1.549170 ACGTGGAAGGCTTAGTACCTG 59.451 52.381 0.00 0.00 37.67 4.00
811 812 1.549170 CGTGGAAGGCTTAGTACCTGT 59.451 52.381 0.00 0.00 37.67 4.00
812 813 2.756760 CGTGGAAGGCTTAGTACCTGTA 59.243 50.000 0.00 0.00 37.67 2.74
813 814 3.181489 CGTGGAAGGCTTAGTACCTGTAG 60.181 52.174 0.00 0.00 37.67 2.74
814 815 3.132467 GTGGAAGGCTTAGTACCTGTAGG 59.868 52.174 0.00 0.00 37.67 3.18
826 827 2.918712 CCTGTAGGTGGAGCATTAGG 57.081 55.000 0.00 0.00 0.00 2.69
827 828 2.398588 CCTGTAGGTGGAGCATTAGGA 58.601 52.381 0.00 0.00 0.00 2.94
828 829 2.366916 CCTGTAGGTGGAGCATTAGGAG 59.633 54.545 0.00 0.00 0.00 3.69
829 830 2.366916 CTGTAGGTGGAGCATTAGGAGG 59.633 54.545 0.00 0.00 0.00 4.30
830 831 1.694696 GTAGGTGGAGCATTAGGAGGG 59.305 57.143 0.00 0.00 0.00 4.30
831 832 0.695803 AGGTGGAGCATTAGGAGGGG 60.696 60.000 0.00 0.00 0.00 4.79
832 833 1.149401 GTGGAGCATTAGGAGGGGC 59.851 63.158 0.00 0.00 0.00 5.80
833 834 2.078665 TGGAGCATTAGGAGGGGCC 61.079 63.158 0.00 0.00 0.00 5.80
843 844 2.764547 GAGGGGCCTAAGAGCGGT 60.765 66.667 0.84 0.00 0.00 5.68
886 887 0.105039 CCTCATCTGCCTCCGTTACC 59.895 60.000 0.00 0.00 0.00 2.85
894 895 2.264794 CTCCGTTACCGCTTGGCT 59.735 61.111 0.00 0.00 35.53 4.75
941 944 2.515057 TTGCGTTGGCTCCACGTT 60.515 55.556 10.75 0.00 40.82 3.99
945 952 1.226030 GCGTTGGCTCCACGTTACTT 61.226 55.000 10.75 0.00 35.83 2.24
989 997 0.250467 AGAACACAGCAGGAACGCAT 60.250 50.000 0.00 0.00 0.00 4.73
1064 1073 2.521958 TTAGGCCTCCGCTGCTTCAC 62.522 60.000 9.68 0.00 34.44 3.18
1096 1105 1.475034 GCCTATCAAATCTGGCACCGA 60.475 52.381 0.00 0.00 44.34 4.69
1153 1162 2.642427 CAAATCGATCACCACCCATCA 58.358 47.619 0.00 0.00 0.00 3.07
1159 1168 1.207089 GATCACCACCCATCAACGAGA 59.793 52.381 0.00 0.00 0.00 4.04
1164 1173 1.078759 CACCCATCAACGAGACGAGC 61.079 60.000 0.00 0.00 0.00 5.03
1186 1195 0.315251 CACAAGCAGACGAGGAGACA 59.685 55.000 0.00 0.00 0.00 3.41
1224 1233 1.811266 CGTGATCCTCCTGCCGTTG 60.811 63.158 0.00 0.00 0.00 4.10
1328 1345 1.025812 CTAGATGTCGTCCGCCTCTT 58.974 55.000 0.00 0.00 0.00 2.85
1436 1466 0.539518 GGCTCTTTCTCCCTCACCTC 59.460 60.000 0.00 0.00 0.00 3.85
1451 1481 2.158519 TCACCTCCTTTCTTTGGTTCCC 60.159 50.000 0.00 0.00 0.00 3.97
1485 1525 0.027586 GTGACTGCGTGTGTTTGACC 59.972 55.000 0.00 0.00 0.00 4.02
1543 1655 8.873830 CATATACGATTTGGGATGACTTGTATC 58.126 37.037 0.00 0.00 0.00 2.24
1595 1708 2.279582 ATGACCTTCTCGTAGTTGCG 57.720 50.000 0.00 0.00 0.00 4.85
1614 1735 3.195610 TGCGTTCAGACTATTGGATCTGT 59.804 43.478 1.48 0.00 42.52 3.41
1646 1767 4.637534 AGCAACAGCGTTGAATATGAAGAT 59.362 37.500 20.50 0.00 0.00 2.40
1790 1915 2.028567 AGCTCTGTCAGTACTCTTTGGC 60.029 50.000 0.00 0.00 0.00 4.52
1833 1960 4.986054 ACCCATTATATCCGCCAAGTAA 57.014 40.909 0.00 0.00 0.00 2.24
1844 1971 0.240945 GCCAAGTAAAGCACGCACAT 59.759 50.000 0.00 0.00 0.00 3.21
1901 2028 6.438186 TCATGAATGAATCAGGCCTACATA 57.562 37.500 3.98 0.00 42.53 2.29
1939 2066 1.537202 GAACAGATTGTGGACCAGCAC 59.463 52.381 0.00 0.00 0.00 4.40
1965 2092 6.053632 ACACCACATCTAGATGAATGTTGA 57.946 37.500 34.16 0.00 41.20 3.18
2091 2225 7.719193 TGATGAATGGAAAGTGTTCAGAAGTAA 59.281 33.333 0.00 0.00 35.56 2.24
2092 2226 7.496529 TGAATGGAAAGTGTTCAGAAGTAAG 57.503 36.000 0.00 0.00 35.25 2.34
2126 2273 2.094494 TCTCGCTGAAGAACATGACTCC 60.094 50.000 0.00 0.00 0.00 3.85
2231 2395 1.402968 CACTATGTTGTGATGCAGGGC 59.597 52.381 0.00 0.00 40.12 5.19
2234 2398 1.252904 ATGTTGTGATGCAGGGCCAC 61.253 55.000 6.18 0.00 0.00 5.01
2237 2401 0.542467 TTGTGATGCAGGGCCACAAT 60.542 50.000 17.20 0.00 43.34 2.71
2396 2565 3.129287 CACCTCTTGGCGCTTGAATTTAT 59.871 43.478 7.64 0.00 36.63 1.40
2434 2603 1.664873 CTCAGGTCCATGCATGACAG 58.335 55.000 28.31 17.52 0.00 3.51
2462 2632 6.633500 TTTGTCCTAATCAACCTCTGTTTG 57.367 37.500 0.00 0.00 30.42 2.93
2613 2802 8.239998 GCTTCCAAATTACTTATATGCAGGATC 58.760 37.037 0.00 0.00 0.00 3.36
2615 2804 6.878923 TCCAAATTACTTATATGCAGGATCCG 59.121 38.462 5.98 2.47 0.00 4.18
2625 2814 2.191513 CAGGATCCGCATGGGCTTG 61.192 63.158 5.98 0.00 38.10 4.01
2665 2854 5.607119 AGTTCAGGCTTATGTAAACAACG 57.393 39.130 0.00 0.00 0.00 4.10
2746 2936 6.607019 TGTACATACTTATTGGGGGATTTCC 58.393 40.000 0.00 0.00 0.00 3.13
2945 3168 4.335416 TGGCCTATGCTAAAATCCTATGC 58.665 43.478 3.32 0.00 37.74 3.14
3013 3237 9.354673 ACACAAGGTCCCATATCTAATTTTATG 57.645 33.333 0.00 0.00 0.00 1.90
3123 3379 7.359933 GCTGCATACTTATTTAGAGAGCATGTC 60.360 40.741 0.00 0.00 31.05 3.06
3139 3395 9.433153 GAGAGCATGTCAATATGATTCTGATTA 57.567 33.333 0.00 0.00 0.00 1.75
3141 3397 8.913487 AGCATGTCAATATGATTCTGATTACA 57.087 30.769 0.00 0.00 0.00 2.41
3218 3498 0.681243 GATTTGGTCAGAGCCCACCC 60.681 60.000 0.00 0.00 0.00 4.61
3222 3502 3.075005 GTCAGAGCCCACCCGCTA 61.075 66.667 0.00 0.00 39.87 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.363443 CTGCACCGCACAAACCAAT 59.637 52.632 0.00 0.00 33.79 3.16
1 2 2.780094 CCTGCACCGCACAAACCAA 61.780 57.895 0.00 0.00 33.79 3.67
3 4 2.904866 TCCTGCACCGCACAAACC 60.905 61.111 0.00 0.00 33.79 3.27
4 5 2.331451 GTCCTGCACCGCACAAAC 59.669 61.111 0.00 0.00 33.79 2.93
6 7 2.591429 CTGTCCTGCACCGCACAA 60.591 61.111 0.00 0.00 33.79 3.33
7 8 2.601194 TTTCTGTCCTGCACCGCACA 62.601 55.000 0.00 0.00 33.79 4.57
8 9 1.891919 TTTCTGTCCTGCACCGCAC 60.892 57.895 0.00 0.00 33.79 5.34
9 10 1.891919 GTTTCTGTCCTGCACCGCA 60.892 57.895 0.00 0.00 36.92 5.69
10 11 1.166531 AAGTTTCTGTCCTGCACCGC 61.167 55.000 0.00 0.00 0.00 5.68
11 12 1.308998 AAAGTTTCTGTCCTGCACCG 58.691 50.000 0.00 0.00 0.00 4.94
12 13 2.799562 GCAAAAGTTTCTGTCCTGCACC 60.800 50.000 3.41 0.00 0.00 5.01
13 14 2.099756 AGCAAAAGTTTCTGTCCTGCAC 59.900 45.455 9.66 0.00 0.00 4.57
14 15 2.099592 CAGCAAAAGTTTCTGTCCTGCA 59.900 45.455 9.66 0.00 0.00 4.41
15 16 2.099756 ACAGCAAAAGTTTCTGTCCTGC 59.900 45.455 4.53 2.52 36.42 4.85
16 17 4.576463 ACTACAGCAAAAGTTTCTGTCCTG 59.424 41.667 11.96 7.79 40.96 3.86
17 18 4.576463 CACTACAGCAAAAGTTTCTGTCCT 59.424 41.667 11.96 0.00 40.96 3.85
18 19 4.789802 GCACTACAGCAAAAGTTTCTGTCC 60.790 45.833 11.96 0.00 40.96 4.02
19 20 4.201910 TGCACTACAGCAAAAGTTTCTGTC 60.202 41.667 11.96 1.66 42.46 3.51
20 21 3.694072 TGCACTACAGCAAAAGTTTCTGT 59.306 39.130 12.91 12.91 42.46 3.41
21 22 4.291540 TGCACTACAGCAAAAGTTTCTG 57.708 40.909 3.41 3.41 42.46 3.02
31 32 3.394719 TGTAAAATCGTGCACTACAGCA 58.605 40.909 16.19 2.51 43.35 4.41
32 33 4.600012 ATGTAAAATCGTGCACTACAGC 57.400 40.909 16.19 0.00 0.00 4.40
33 34 7.851822 AAAAATGTAAAATCGTGCACTACAG 57.148 32.000 16.19 0.00 0.00 2.74
55 56 5.838531 ACCATTTGACGTTCCAGTAAAAA 57.161 34.783 0.00 0.00 29.10 1.94
56 57 5.591067 AGAACCATTTGACGTTCCAGTAAAA 59.409 36.000 0.00 0.00 39.36 1.52
57 58 5.008217 CAGAACCATTTGACGTTCCAGTAAA 59.992 40.000 0.00 0.00 39.36 2.01
58 59 4.513692 CAGAACCATTTGACGTTCCAGTAA 59.486 41.667 0.00 0.00 39.36 2.24
59 60 4.062293 CAGAACCATTTGACGTTCCAGTA 58.938 43.478 0.00 0.00 39.36 2.74
60 61 2.878406 CAGAACCATTTGACGTTCCAGT 59.122 45.455 0.00 0.00 39.36 4.00
61 62 3.138304 TCAGAACCATTTGACGTTCCAG 58.862 45.455 0.00 0.00 39.36 3.86
62 63 3.201353 TCAGAACCATTTGACGTTCCA 57.799 42.857 0.00 0.00 39.36 3.53
63 64 4.455877 AGAATCAGAACCATTTGACGTTCC 59.544 41.667 0.00 0.00 39.36 3.62
64 65 5.613358 AGAATCAGAACCATTTGACGTTC 57.387 39.130 0.00 0.00 38.93 3.95
65 66 6.391227 AAAGAATCAGAACCATTTGACGTT 57.609 33.333 0.00 0.00 0.00 3.99
66 67 6.391227 AAAAGAATCAGAACCATTTGACGT 57.609 33.333 0.00 0.00 0.00 4.34
67 68 6.346040 GCAAAAAGAATCAGAACCATTTGACG 60.346 38.462 0.00 0.00 0.00 4.35
68 69 6.479660 TGCAAAAAGAATCAGAACCATTTGAC 59.520 34.615 0.00 0.00 0.00 3.18
69 70 6.479660 GTGCAAAAAGAATCAGAACCATTTGA 59.520 34.615 0.00 0.00 0.00 2.69
70 71 6.480981 AGTGCAAAAAGAATCAGAACCATTTG 59.519 34.615 0.00 0.00 0.00 2.32
71 72 6.480981 CAGTGCAAAAAGAATCAGAACCATTT 59.519 34.615 0.00 0.00 0.00 2.32
72 73 5.987347 CAGTGCAAAAAGAATCAGAACCATT 59.013 36.000 0.00 0.00 0.00 3.16
73 74 5.069516 ACAGTGCAAAAAGAATCAGAACCAT 59.930 36.000 0.00 0.00 0.00 3.55
74 75 4.402155 ACAGTGCAAAAAGAATCAGAACCA 59.598 37.500 0.00 0.00 0.00 3.67
75 76 4.936891 ACAGTGCAAAAAGAATCAGAACC 58.063 39.130 0.00 0.00 0.00 3.62
76 77 5.825507 AGACAGTGCAAAAAGAATCAGAAC 58.174 37.500 0.00 0.00 0.00 3.01
77 78 6.095300 TCAAGACAGTGCAAAAAGAATCAGAA 59.905 34.615 0.00 0.00 0.00 3.02
78 79 5.589855 TCAAGACAGTGCAAAAAGAATCAGA 59.410 36.000 0.00 0.00 0.00 3.27
79 80 5.824429 TCAAGACAGTGCAAAAAGAATCAG 58.176 37.500 0.00 0.00 0.00 2.90
80 81 5.833406 TCAAGACAGTGCAAAAAGAATCA 57.167 34.783 0.00 0.00 0.00 2.57
81 82 6.211515 ACATCAAGACAGTGCAAAAAGAATC 58.788 36.000 0.00 0.00 0.00 2.52
82 83 6.152932 ACATCAAGACAGTGCAAAAAGAAT 57.847 33.333 0.00 0.00 0.00 2.40
83 84 5.581126 ACATCAAGACAGTGCAAAAAGAA 57.419 34.783 0.00 0.00 0.00 2.52
84 85 5.588246 TGTACATCAAGACAGTGCAAAAAGA 59.412 36.000 0.00 0.00 0.00 2.52
85 86 5.820131 TGTACATCAAGACAGTGCAAAAAG 58.180 37.500 0.00 0.00 0.00 2.27
86 87 5.826601 TGTACATCAAGACAGTGCAAAAA 57.173 34.783 0.00 0.00 0.00 1.94
87 88 5.826601 TTGTACATCAAGACAGTGCAAAA 57.173 34.783 0.00 0.00 35.47 2.44
88 89 5.826601 TTTGTACATCAAGACAGTGCAAA 57.173 34.783 12.95 12.95 42.61 3.68
89 90 6.183360 ACAATTTGTACATCAAGACAGTGCAA 60.183 34.615 0.00 0.00 37.35 4.08
90 91 5.299028 ACAATTTGTACATCAAGACAGTGCA 59.701 36.000 0.00 0.00 37.35 4.57
91 92 5.762045 ACAATTTGTACATCAAGACAGTGC 58.238 37.500 0.00 0.00 37.35 4.40
92 93 9.897744 ATAAACAATTTGTACATCAAGACAGTG 57.102 29.630 1.76 0.00 37.35 3.66
93 94 9.897744 CATAAACAATTTGTACATCAAGACAGT 57.102 29.630 1.76 0.00 37.35 3.55
94 95 9.897744 ACATAAACAATTTGTACATCAAGACAG 57.102 29.630 1.76 0.00 37.35 3.51
109 110 9.566432 TGCCAAAATTAGGAAACATAAACAATT 57.434 25.926 1.21 0.00 0.00 2.32
110 111 9.218440 CTGCCAAAATTAGGAAACATAAACAAT 57.782 29.630 1.21 0.00 0.00 2.71
111 112 8.424918 TCTGCCAAAATTAGGAAACATAAACAA 58.575 29.630 1.21 0.00 0.00 2.83
112 113 7.957002 TCTGCCAAAATTAGGAAACATAAACA 58.043 30.769 1.21 0.00 0.00 2.83
113 114 8.825667 TTCTGCCAAAATTAGGAAACATAAAC 57.174 30.769 1.21 0.00 0.00 2.01
118 119 9.651913 GATAAATTCTGCCAAAATTAGGAAACA 57.348 29.630 1.21 0.00 0.00 2.83
119 120 9.651913 TGATAAATTCTGCCAAAATTAGGAAAC 57.348 29.630 1.21 0.00 0.00 2.78
149 150 9.857656 AATCTGAACATTCACCATACTTATGAT 57.142 29.630 0.00 0.00 32.94 2.45
150 151 9.112725 CAATCTGAACATTCACCATACTTATGA 57.887 33.333 0.00 0.00 32.94 2.15
151 152 8.896744 ACAATCTGAACATTCACCATACTTATG 58.103 33.333 0.00 0.00 32.90 1.90
152 153 9.466497 AACAATCTGAACATTCACCATACTTAT 57.534 29.630 0.00 0.00 32.90 1.73
153 154 8.862325 AACAATCTGAACATTCACCATACTTA 57.138 30.769 0.00 0.00 32.90 2.24
154 155 7.765695 AACAATCTGAACATTCACCATACTT 57.234 32.000 0.00 0.00 32.90 2.24
155 156 7.882791 TGTAACAATCTGAACATTCACCATACT 59.117 33.333 0.00 0.00 32.90 2.12
156 157 8.039603 TGTAACAATCTGAACATTCACCATAC 57.960 34.615 0.00 0.00 32.90 2.39
157 158 8.100164 TCTGTAACAATCTGAACATTCACCATA 58.900 33.333 0.00 0.00 32.90 2.74
158 159 6.942005 TCTGTAACAATCTGAACATTCACCAT 59.058 34.615 0.00 0.00 32.90 3.55
159 160 6.204688 GTCTGTAACAATCTGAACATTCACCA 59.795 38.462 0.00 0.00 32.90 4.17
160 161 6.428159 AGTCTGTAACAATCTGAACATTCACC 59.572 38.462 0.00 0.00 32.90 4.02
161 162 7.041780 ACAGTCTGTAACAATCTGAACATTCAC 60.042 37.037 2.87 0.00 32.90 3.18
162 163 6.992123 ACAGTCTGTAACAATCTGAACATTCA 59.008 34.615 2.87 0.00 35.57 2.57
163 164 7.426929 ACAGTCTGTAACAATCTGAACATTC 57.573 36.000 2.87 0.00 0.00 2.67
164 165 7.716998 AGAACAGTCTGTAACAATCTGAACATT 59.283 33.333 5.77 0.00 30.83 2.71
165 166 7.220030 AGAACAGTCTGTAACAATCTGAACAT 58.780 34.615 5.77 0.00 30.83 2.71
166 167 6.582636 AGAACAGTCTGTAACAATCTGAACA 58.417 36.000 5.77 0.00 30.83 3.18
167 168 8.764524 ATAGAACAGTCTGTAACAATCTGAAC 57.235 34.615 5.77 2.77 35.12 3.18
168 169 9.778741 AAATAGAACAGTCTGTAACAATCTGAA 57.221 29.630 5.77 0.00 35.12 3.02
169 170 9.778741 AAAATAGAACAGTCTGTAACAATCTGA 57.221 29.630 5.77 0.00 35.12 3.27
174 175 9.168451 TGTCAAAAATAGAACAGTCTGTAACAA 57.832 29.630 5.77 0.00 35.12 2.83
175 176 8.725405 TGTCAAAAATAGAACAGTCTGTAACA 57.275 30.769 5.77 0.00 35.12 2.41
176 177 9.042008 TCTGTCAAAAATAGAACAGTCTGTAAC 57.958 33.333 5.77 4.06 35.12 2.50
177 178 9.778741 ATCTGTCAAAAATAGAACAGTCTGTAA 57.221 29.630 5.77 0.00 35.12 2.41
178 179 9.778741 AATCTGTCAAAAATAGAACAGTCTGTA 57.221 29.630 5.77 0.00 35.12 2.74
179 180 8.682936 AATCTGTCAAAAATAGAACAGTCTGT 57.317 30.769 0.00 0.00 35.12 3.41
180 181 8.997323 AGAATCTGTCAAAAATAGAACAGTCTG 58.003 33.333 0.00 0.00 35.12 3.51
181 182 8.997323 CAGAATCTGTCAAAAATAGAACAGTCT 58.003 33.333 1.31 0.00 37.95 3.24
182 183 8.778358 ACAGAATCTGTCAAAAATAGAACAGTC 58.222 33.333 10.56 0.00 41.21 3.51
183 184 8.682936 ACAGAATCTGTCAAAAATAGAACAGT 57.317 30.769 10.56 0.00 41.21 3.55
184 185 9.956720 AAACAGAATCTGTCAAAAATAGAACAG 57.043 29.630 17.02 0.00 44.62 3.16
191 192 8.553696 GCATCAAAAACAGAATCTGTCAAAAAT 58.446 29.630 17.02 5.66 44.62 1.82
192 193 7.548427 TGCATCAAAAACAGAATCTGTCAAAAA 59.452 29.630 17.02 3.50 44.62 1.94
193 194 7.040494 TGCATCAAAAACAGAATCTGTCAAAA 58.960 30.769 17.02 2.44 44.62 2.44
194 195 6.571605 TGCATCAAAAACAGAATCTGTCAAA 58.428 32.000 17.02 1.74 44.62 2.69
195 196 6.146601 TGCATCAAAAACAGAATCTGTCAA 57.853 33.333 17.02 1.38 44.62 3.18
196 197 5.771153 TGCATCAAAAACAGAATCTGTCA 57.229 34.783 17.02 4.77 44.62 3.58
197 198 7.533426 ACTATGCATCAAAAACAGAATCTGTC 58.467 34.615 17.02 2.04 44.62 3.51
199 200 8.644619 CAAACTATGCATCAAAAACAGAATCTG 58.355 33.333 8.98 8.98 37.52 2.90
200 201 8.752766 CAAACTATGCATCAAAAACAGAATCT 57.247 30.769 0.19 0.00 0.00 2.40
243 244 9.812347 TGGCTTAATCCACTGATATAAATTGAT 57.188 29.630 0.00 0.00 0.00 2.57
244 245 9.812347 ATGGCTTAATCCACTGATATAAATTGA 57.188 29.630 0.00 0.00 39.25 2.57
245 246 9.850628 CATGGCTTAATCCACTGATATAAATTG 57.149 33.333 0.00 0.00 39.25 2.32
246 247 9.812347 TCATGGCTTAATCCACTGATATAAATT 57.188 29.630 0.00 0.00 39.25 1.82
247 248 9.812347 TTCATGGCTTAATCCACTGATATAAAT 57.188 29.630 0.00 0.00 39.25 1.40
248 249 9.639563 TTTCATGGCTTAATCCACTGATATAAA 57.360 29.630 0.00 0.00 39.25 1.40
249 250 9.639563 TTTTCATGGCTTAATCCACTGATATAA 57.360 29.630 0.00 0.00 39.25 0.98
250 251 9.639563 TTTTTCATGGCTTAATCCACTGATATA 57.360 29.630 0.00 0.00 39.25 0.86
251 252 8.537728 TTTTTCATGGCTTAATCCACTGATAT 57.462 30.769 0.00 0.00 39.25 1.63
252 253 7.615365 ACTTTTTCATGGCTTAATCCACTGATA 59.385 33.333 0.00 0.00 39.25 2.15
253 254 6.438425 ACTTTTTCATGGCTTAATCCACTGAT 59.562 34.615 0.00 0.00 39.25 2.90
254 255 5.774690 ACTTTTTCATGGCTTAATCCACTGA 59.225 36.000 0.00 3.70 39.25 3.41
255 256 6.029346 ACTTTTTCATGGCTTAATCCACTG 57.971 37.500 0.00 1.45 39.25 3.66
256 257 6.670695 AACTTTTTCATGGCTTAATCCACT 57.329 33.333 0.00 0.00 39.25 4.00
275 276 9.884636 TGCATTGTGTCTACTGTAATATAACTT 57.115 29.630 0.00 0.00 0.00 2.66
276 277 9.884636 TTGCATTGTGTCTACTGTAATATAACT 57.115 29.630 0.00 0.00 0.00 2.24
280 281 9.231297 ACTTTTGCATTGTGTCTACTGTAATAT 57.769 29.630 0.00 0.00 0.00 1.28
281 282 8.615878 ACTTTTGCATTGTGTCTACTGTAATA 57.384 30.769 0.00 0.00 0.00 0.98
282 283 7.510549 ACTTTTGCATTGTGTCTACTGTAAT 57.489 32.000 0.00 0.00 0.00 1.89
283 284 6.935741 ACTTTTGCATTGTGTCTACTGTAA 57.064 33.333 0.00 0.00 0.00 2.41
284 285 8.439993 TTTACTTTTGCATTGTGTCTACTGTA 57.560 30.769 0.00 0.00 0.00 2.74
285 286 6.935741 TTACTTTTGCATTGTGTCTACTGT 57.064 33.333 0.00 0.00 0.00 3.55
286 287 8.801715 ATTTTACTTTTGCATTGTGTCTACTG 57.198 30.769 0.00 0.00 0.00 2.74
290 291 9.979578 TTCATATTTTACTTTTGCATTGTGTCT 57.020 25.926 0.00 0.00 0.00 3.41
299 300 9.328721 GCAAACCAATTCATATTTTACTTTTGC 57.671 29.630 0.00 0.00 37.75 3.68
303 304 9.995003 TCTTGCAAACCAATTCATATTTTACTT 57.005 25.926 0.00 0.00 31.91 2.24
304 305 9.643693 CTCTTGCAAACCAATTCATATTTTACT 57.356 29.630 0.00 0.00 31.91 2.24
305 306 9.423061 ACTCTTGCAAACCAATTCATATTTTAC 57.577 29.630 0.00 0.00 31.91 2.01
307 308 9.423061 GTACTCTTGCAAACCAATTCATATTTT 57.577 29.630 0.00 0.00 31.91 1.82
308 309 8.806146 AGTACTCTTGCAAACCAATTCATATTT 58.194 29.630 0.00 0.00 31.91 1.40
309 310 8.353423 AGTACTCTTGCAAACCAATTCATATT 57.647 30.769 0.00 0.00 31.91 1.28
310 311 7.944729 AGTACTCTTGCAAACCAATTCATAT 57.055 32.000 0.00 0.00 31.91 1.78
311 312 7.759489 AAGTACTCTTGCAAACCAATTCATA 57.241 32.000 0.00 0.00 31.91 2.15
312 313 6.655078 AAGTACTCTTGCAAACCAATTCAT 57.345 33.333 0.00 0.00 31.91 2.57
313 314 6.995686 TCTAAGTACTCTTGCAAACCAATTCA 59.004 34.615 0.00 0.00 35.36 2.57
314 315 7.173390 ACTCTAAGTACTCTTGCAAACCAATTC 59.827 37.037 0.00 0.00 35.36 2.17
315 316 6.998673 ACTCTAAGTACTCTTGCAAACCAATT 59.001 34.615 0.00 0.00 35.36 2.32
316 317 6.428159 CACTCTAAGTACTCTTGCAAACCAAT 59.572 38.462 0.00 0.00 35.36 3.16
317 318 5.758296 CACTCTAAGTACTCTTGCAAACCAA 59.242 40.000 0.00 0.00 35.36 3.67
318 319 5.297547 CACTCTAAGTACTCTTGCAAACCA 58.702 41.667 0.00 0.00 35.36 3.67
319 320 4.691216 CCACTCTAAGTACTCTTGCAAACC 59.309 45.833 0.00 0.00 35.36 3.27
320 321 5.177696 CACCACTCTAAGTACTCTTGCAAAC 59.822 44.000 0.00 0.00 35.36 2.93
321 322 5.069914 TCACCACTCTAAGTACTCTTGCAAA 59.930 40.000 0.00 0.00 35.36 3.68
322 323 4.587262 TCACCACTCTAAGTACTCTTGCAA 59.413 41.667 0.00 0.00 35.36 4.08
323 324 4.149598 TCACCACTCTAAGTACTCTTGCA 58.850 43.478 0.00 0.00 35.36 4.08
324 325 4.785511 TCACCACTCTAAGTACTCTTGC 57.214 45.455 0.00 0.00 35.36 4.01
325 326 6.091441 GCAAATCACCACTCTAAGTACTCTTG 59.909 42.308 0.00 0.00 35.36 3.02
326 327 6.014156 AGCAAATCACCACTCTAAGTACTCTT 60.014 38.462 0.00 0.00 37.65 2.85
327 328 5.482175 AGCAAATCACCACTCTAAGTACTCT 59.518 40.000 0.00 0.00 0.00 3.24
328 329 5.725362 AGCAAATCACCACTCTAAGTACTC 58.275 41.667 0.00 0.00 0.00 2.59
329 330 5.746990 AGCAAATCACCACTCTAAGTACT 57.253 39.130 0.00 0.00 0.00 2.73
330 331 6.803154 AAAGCAAATCACCACTCTAAGTAC 57.197 37.500 0.00 0.00 0.00 2.73
331 332 9.515226 AAATAAAGCAAATCACCACTCTAAGTA 57.485 29.630 0.00 0.00 0.00 2.24
332 333 8.409358 AAATAAAGCAAATCACCACTCTAAGT 57.591 30.769 0.00 0.00 0.00 2.24
367 368 9.574516 AAATAACATAGTGGGGATGAACTATTC 57.425 33.333 0.00 0.00 37.48 1.75
421 422 7.643569 TGAAACATTGATGTGGCAGTATTAT 57.356 32.000 0.00 0.00 41.61 1.28
422 423 7.643569 ATGAAACATTGATGTGGCAGTATTA 57.356 32.000 0.00 0.00 41.61 0.98
425 426 5.981088 AATGAAACATTGATGTGGCAGTA 57.019 34.783 0.00 0.00 41.61 2.74
438 439 6.442513 GCTTGTAAGCCTCTAATGAAACAT 57.557 37.500 5.30 0.00 46.20 2.71
439 440 5.880054 GCTTGTAAGCCTCTAATGAAACA 57.120 39.130 5.30 0.00 46.20 2.83
485 486 2.032030 CAGTAACTGAAGCAAACGTGGG 60.032 50.000 0.00 0.00 32.44 4.61
537 538 2.569059 CACCTCATCTAAGCACCCATG 58.431 52.381 0.00 0.00 0.00 3.66
538 539 1.133976 GCACCTCATCTAAGCACCCAT 60.134 52.381 0.00 0.00 0.00 4.00
539 540 0.253044 GCACCTCATCTAAGCACCCA 59.747 55.000 0.00 0.00 0.00 4.51
540 541 0.543749 AGCACCTCATCTAAGCACCC 59.456 55.000 0.00 0.00 0.00 4.61
541 542 3.462021 CTTAGCACCTCATCTAAGCACC 58.538 50.000 0.00 0.00 36.48 5.01
559 560 8.506168 AGTTGCTAAGCTATTTAATGTGCTTA 57.494 30.769 18.45 18.45 44.08 3.09
560 561 7.396540 AGTTGCTAAGCTATTTAATGTGCTT 57.603 32.000 18.26 18.26 45.94 3.91
561 562 8.682936 ATAGTTGCTAAGCTATTTAATGTGCT 57.317 30.769 0.00 2.44 37.37 4.40
562 563 9.813080 GTATAGTTGCTAAGCTATTTAATGTGC 57.187 33.333 0.00 0.00 0.00 4.57
566 567 9.945904 GGGAGTATAGTTGCTAAGCTATTTAAT 57.054 33.333 0.00 0.00 0.00 1.40
567 568 8.373220 GGGGAGTATAGTTGCTAAGCTATTTAA 58.627 37.037 0.00 0.00 0.00 1.52
568 569 7.511371 TGGGGAGTATAGTTGCTAAGCTATTTA 59.489 37.037 0.00 0.00 0.00 1.40
569 570 6.329197 TGGGGAGTATAGTTGCTAAGCTATTT 59.671 38.462 0.00 0.00 0.00 1.40
570 571 5.844516 TGGGGAGTATAGTTGCTAAGCTATT 59.155 40.000 0.00 0.00 0.00 1.73
571 572 5.403512 TGGGGAGTATAGTTGCTAAGCTAT 58.596 41.667 0.00 0.00 0.00 2.97
572 573 4.811498 TGGGGAGTATAGTTGCTAAGCTA 58.189 43.478 0.00 0.00 0.00 3.32
573 574 3.654273 TGGGGAGTATAGTTGCTAAGCT 58.346 45.455 0.00 0.00 0.00 3.74
574 575 4.417426 TTGGGGAGTATAGTTGCTAAGC 57.583 45.455 0.00 0.00 0.00 3.09
575 576 4.757149 GCATTGGGGAGTATAGTTGCTAAG 59.243 45.833 0.00 0.00 0.00 2.18
576 577 4.165180 TGCATTGGGGAGTATAGTTGCTAA 59.835 41.667 0.00 0.00 0.00 3.09
577 578 3.714280 TGCATTGGGGAGTATAGTTGCTA 59.286 43.478 0.00 0.00 0.00 3.49
578 579 2.509548 TGCATTGGGGAGTATAGTTGCT 59.490 45.455 0.00 0.00 0.00 3.91
579 580 2.930950 TGCATTGGGGAGTATAGTTGC 58.069 47.619 0.00 0.00 0.00 4.17
580 581 5.221925 ACCTATGCATTGGGGAGTATAGTTG 60.222 44.000 27.42 2.09 31.18 3.16
581 582 4.913968 ACCTATGCATTGGGGAGTATAGTT 59.086 41.667 27.42 3.31 31.18 2.24
582 583 4.287067 CACCTATGCATTGGGGAGTATAGT 59.713 45.833 27.42 4.00 31.18 2.12
583 584 4.287067 ACACCTATGCATTGGGGAGTATAG 59.713 45.833 32.26 7.56 32.40 1.31
584 585 4.239495 ACACCTATGCATTGGGGAGTATA 58.761 43.478 32.26 0.00 30.32 1.47
585 586 3.056080 ACACCTATGCATTGGGGAGTAT 58.944 45.455 32.26 10.22 30.32 2.12
586 587 2.487775 ACACCTATGCATTGGGGAGTA 58.512 47.619 32.26 0.00 30.32 2.59
587 588 1.298953 ACACCTATGCATTGGGGAGT 58.701 50.000 32.26 21.87 30.32 3.85
588 589 2.442236 AACACCTATGCATTGGGGAG 57.558 50.000 32.26 21.29 30.32 4.30
589 590 2.917713 AAACACCTATGCATTGGGGA 57.082 45.000 32.26 0.75 30.32 4.81
590 591 2.362077 GCTAAACACCTATGCATTGGGG 59.638 50.000 25.44 25.44 32.08 4.96
591 592 3.290710 AGCTAAACACCTATGCATTGGG 58.709 45.455 27.42 20.68 0.00 4.12
592 593 4.989279 AAGCTAAACACCTATGCATTGG 57.011 40.909 23.42 23.42 0.00 3.16
593 594 5.577945 CCAAAAGCTAAACACCTATGCATTG 59.422 40.000 3.54 1.90 0.00 2.82
594 595 5.245977 ACCAAAAGCTAAACACCTATGCATT 59.754 36.000 3.54 0.00 0.00 3.56
595 596 4.772100 ACCAAAAGCTAAACACCTATGCAT 59.228 37.500 3.79 3.79 0.00 3.96
596 597 4.148838 ACCAAAAGCTAAACACCTATGCA 58.851 39.130 0.00 0.00 0.00 3.96
597 598 4.783764 ACCAAAAGCTAAACACCTATGC 57.216 40.909 0.00 0.00 0.00 3.14
598 599 4.923281 GCAACCAAAAGCTAAACACCTATG 59.077 41.667 0.00 0.00 0.00 2.23
599 600 4.832823 AGCAACCAAAAGCTAAACACCTAT 59.167 37.500 0.00 0.00 39.78 2.57
600 601 4.211920 AGCAACCAAAAGCTAAACACCTA 58.788 39.130 0.00 0.00 39.78 3.08
601 602 3.031013 AGCAACCAAAAGCTAAACACCT 58.969 40.909 0.00 0.00 39.78 4.00
602 603 3.452755 AGCAACCAAAAGCTAAACACC 57.547 42.857 0.00 0.00 39.78 4.16
610 611 4.505313 AGTAAGCTTAGCAACCAAAAGC 57.495 40.909 6.38 0.00 44.70 3.51
611 612 6.072112 TGAAGTAAGCTTAGCAACCAAAAG 57.928 37.500 6.38 0.00 34.61 2.27
612 613 6.648879 ATGAAGTAAGCTTAGCAACCAAAA 57.351 33.333 6.38 0.00 34.61 2.44
613 614 6.648879 AATGAAGTAAGCTTAGCAACCAAA 57.351 33.333 6.38 0.00 34.61 3.28
614 615 6.648879 AAATGAAGTAAGCTTAGCAACCAA 57.351 33.333 6.38 0.00 34.61 3.67
615 616 7.753309 TTAAATGAAGTAAGCTTAGCAACCA 57.247 32.000 6.38 1.78 34.61 3.67
616 617 8.458843 TCATTAAATGAAGTAAGCTTAGCAACC 58.541 33.333 6.38 0.00 36.11 3.77
637 638 9.448438 TGAAGAGCTTTAGTTGCTAAATCATTA 57.552 29.630 2.34 0.00 41.30 1.90
638 639 8.340618 TGAAGAGCTTTAGTTGCTAAATCATT 57.659 30.769 2.34 0.00 41.30 2.57
639 640 7.928307 TGAAGAGCTTTAGTTGCTAAATCAT 57.072 32.000 2.34 0.00 41.30 2.45
640 641 7.391554 ACATGAAGAGCTTTAGTTGCTAAATCA 59.608 33.333 0.00 3.92 41.30 2.57
641 642 7.756558 ACATGAAGAGCTTTAGTTGCTAAATC 58.243 34.615 0.00 0.00 41.30 2.17
642 643 7.693969 ACATGAAGAGCTTTAGTTGCTAAAT 57.306 32.000 0.00 0.00 41.30 1.40
643 644 8.792830 ATACATGAAGAGCTTTAGTTGCTAAA 57.207 30.769 0.00 2.01 41.30 1.85
644 645 8.668353 CAATACATGAAGAGCTTTAGTTGCTAA 58.332 33.333 0.00 0.00 41.30 3.09
645 646 7.280876 CCAATACATGAAGAGCTTTAGTTGCTA 59.719 37.037 0.00 0.00 41.30 3.49
646 647 6.094603 CCAATACATGAAGAGCTTTAGTTGCT 59.905 38.462 0.00 0.00 44.24 3.91
647 648 6.127897 ACCAATACATGAAGAGCTTTAGTTGC 60.128 38.462 0.00 0.00 0.00 4.17
648 649 7.246311 CACCAATACATGAAGAGCTTTAGTTG 58.754 38.462 0.00 0.00 0.00 3.16
649 650 6.375455 CCACCAATACATGAAGAGCTTTAGTT 59.625 38.462 0.00 0.00 0.00 2.24
650 651 5.882557 CCACCAATACATGAAGAGCTTTAGT 59.117 40.000 0.00 0.00 0.00 2.24
651 652 5.297776 CCCACCAATACATGAAGAGCTTTAG 59.702 44.000 0.00 0.00 0.00 1.85
652 653 5.192927 CCCACCAATACATGAAGAGCTTTA 58.807 41.667 0.00 0.00 0.00 1.85
653 654 4.019174 CCCACCAATACATGAAGAGCTTT 58.981 43.478 0.00 0.00 0.00 3.51
654 655 3.010584 ACCCACCAATACATGAAGAGCTT 59.989 43.478 0.00 0.00 0.00 3.74
655 656 2.578021 ACCCACCAATACATGAAGAGCT 59.422 45.455 0.00 0.00 0.00 4.09
656 657 3.004752 ACCCACCAATACATGAAGAGC 57.995 47.619 0.00 0.00 0.00 4.09
657 658 5.256474 AGAAACCCACCAATACATGAAGAG 58.744 41.667 0.00 0.00 0.00 2.85
658 659 5.255397 AGAAACCCACCAATACATGAAGA 57.745 39.130 0.00 0.00 0.00 2.87
659 660 5.982890 AAGAAACCCACCAATACATGAAG 57.017 39.130 0.00 0.00 0.00 3.02
660 661 6.553100 AGAAAAGAAACCCACCAATACATGAA 59.447 34.615 0.00 0.00 0.00 2.57
661 662 6.074648 AGAAAAGAAACCCACCAATACATGA 58.925 36.000 0.00 0.00 0.00 3.07
662 663 6.345096 AGAAAAGAAACCCACCAATACATG 57.655 37.500 0.00 0.00 0.00 3.21
663 664 6.994421 AAGAAAAGAAACCCACCAATACAT 57.006 33.333 0.00 0.00 0.00 2.29
664 665 6.800072 AAAGAAAAGAAACCCACCAATACA 57.200 33.333 0.00 0.00 0.00 2.29
665 666 9.772973 ATTTAAAGAAAAGAAACCCACCAATAC 57.227 29.630 0.00 0.00 0.00 1.89
666 667 9.771534 CATTTAAAGAAAAGAAACCCACCAATA 57.228 29.630 0.00 0.00 0.00 1.90
667 668 8.271458 ACATTTAAAGAAAAGAAACCCACCAAT 58.729 29.630 0.00 0.00 0.00 3.16
668 669 7.625469 ACATTTAAAGAAAAGAAACCCACCAA 58.375 30.769 0.00 0.00 0.00 3.67
669 670 7.189079 ACATTTAAAGAAAAGAAACCCACCA 57.811 32.000 0.00 0.00 0.00 4.17
670 671 8.500753 AAACATTTAAAGAAAAGAAACCCACC 57.499 30.769 0.00 0.00 0.00 4.61
671 672 9.767684 CAAAACATTTAAAGAAAAGAAACCCAC 57.232 29.630 0.00 0.00 0.00 4.61
672 673 8.454894 GCAAAACATTTAAAGAAAAGAAACCCA 58.545 29.630 0.00 0.00 0.00 4.51
673 674 7.913297 GGCAAAACATTTAAAGAAAAGAAACCC 59.087 33.333 0.00 0.00 0.00 4.11
674 675 8.673711 AGGCAAAACATTTAAAGAAAAGAAACC 58.326 29.630 0.00 0.00 0.00 3.27
677 678 9.541143 CCTAGGCAAAACATTTAAAGAAAAGAA 57.459 29.630 0.00 0.00 0.00 2.52
678 679 8.700973 ACCTAGGCAAAACATTTAAAGAAAAGA 58.299 29.630 9.30 0.00 0.00 2.52
679 680 8.887036 ACCTAGGCAAAACATTTAAAGAAAAG 57.113 30.769 9.30 0.00 0.00 2.27
680 681 9.320352 GAACCTAGGCAAAACATTTAAAGAAAA 57.680 29.630 9.30 0.00 0.00 2.29
681 682 8.478877 TGAACCTAGGCAAAACATTTAAAGAAA 58.521 29.630 9.30 0.00 0.00 2.52
682 683 7.923878 GTGAACCTAGGCAAAACATTTAAAGAA 59.076 33.333 9.30 0.00 0.00 2.52
683 684 7.430441 GTGAACCTAGGCAAAACATTTAAAGA 58.570 34.615 9.30 0.00 0.00 2.52
684 685 6.362283 CGTGAACCTAGGCAAAACATTTAAAG 59.638 38.462 9.30 0.00 0.00 1.85
685 686 6.210078 CGTGAACCTAGGCAAAACATTTAAA 58.790 36.000 9.30 0.00 0.00 1.52
686 687 5.764131 CGTGAACCTAGGCAAAACATTTAA 58.236 37.500 9.30 0.00 0.00 1.52
687 688 4.320641 GCGTGAACCTAGGCAAAACATTTA 60.321 41.667 9.30 0.00 0.00 1.40
688 689 3.552068 GCGTGAACCTAGGCAAAACATTT 60.552 43.478 9.30 0.00 0.00 2.32
689 690 2.030274 GCGTGAACCTAGGCAAAACATT 60.030 45.455 9.30 0.00 0.00 2.71
690 691 1.539827 GCGTGAACCTAGGCAAAACAT 59.460 47.619 9.30 0.00 0.00 2.71
691 692 0.948678 GCGTGAACCTAGGCAAAACA 59.051 50.000 9.30 0.00 0.00 2.83
692 693 0.110373 CGCGTGAACCTAGGCAAAAC 60.110 55.000 9.30 1.41 0.00 2.43
693 694 1.847890 GCGCGTGAACCTAGGCAAAA 61.848 55.000 9.30 0.00 0.00 2.44
694 695 2.322081 GCGCGTGAACCTAGGCAAA 61.322 57.895 9.30 0.00 0.00 3.68
695 696 2.725203 AAGCGCGTGAACCTAGGCAA 62.725 55.000 9.30 0.00 0.00 4.52
696 697 1.879737 TAAGCGCGTGAACCTAGGCA 61.880 55.000 9.30 0.00 0.00 4.75
697 698 1.146358 CTAAGCGCGTGAACCTAGGC 61.146 60.000 9.30 0.00 0.00 3.93
698 699 1.146358 GCTAAGCGCGTGAACCTAGG 61.146 60.000 7.41 7.41 0.00 3.02
699 700 0.457853 TGCTAAGCGCGTGAACCTAG 60.458 55.000 8.43 0.00 43.27 3.02
700 701 0.174845 ATGCTAAGCGCGTGAACCTA 59.825 50.000 8.43 0.00 43.27 3.08
701 702 0.673644 AATGCTAAGCGCGTGAACCT 60.674 50.000 8.43 0.00 43.27 3.50
702 703 0.521242 CAATGCTAAGCGCGTGAACC 60.521 55.000 8.43 0.00 43.27 3.62
703 704 0.165944 ACAATGCTAAGCGCGTGAAC 59.834 50.000 8.43 0.00 43.27 3.18
704 705 0.871722 AACAATGCTAAGCGCGTGAA 59.128 45.000 8.43 0.00 43.27 3.18
705 706 0.871722 AAACAATGCTAAGCGCGTGA 59.128 45.000 8.43 0.00 43.27 4.35
706 707 1.135972 AGAAACAATGCTAAGCGCGTG 60.136 47.619 8.43 0.00 43.27 5.34
707 708 1.156736 AGAAACAATGCTAAGCGCGT 58.843 45.000 8.43 0.00 43.27 6.01
708 709 2.169179 GAAGAAACAATGCTAAGCGCG 58.831 47.619 0.00 0.00 43.27 6.86
709 710 2.162408 AGGAAGAAACAATGCTAAGCGC 59.838 45.455 0.00 0.00 39.77 5.92
710 711 3.426695 CCAGGAAGAAACAATGCTAAGCG 60.427 47.826 0.00 0.00 0.00 4.68
711 712 3.119352 CCCAGGAAGAAACAATGCTAAGC 60.119 47.826 0.00 0.00 0.00 3.09
712 713 4.335416 TCCCAGGAAGAAACAATGCTAAG 58.665 43.478 0.00 0.00 0.00 2.18
713 714 4.380843 TCCCAGGAAGAAACAATGCTAA 57.619 40.909 0.00 0.00 0.00 3.09
714 715 4.018506 TGATCCCAGGAAGAAACAATGCTA 60.019 41.667 0.00 0.00 0.00 3.49
715 716 2.978156 TCCCAGGAAGAAACAATGCT 57.022 45.000 0.00 0.00 0.00 3.79
716 717 3.091545 TGATCCCAGGAAGAAACAATGC 58.908 45.455 0.00 0.00 0.00 3.56
717 718 4.081406 TGTGATCCCAGGAAGAAACAATG 58.919 43.478 0.00 0.00 0.00 2.82
718 719 4.387026 TGTGATCCCAGGAAGAAACAAT 57.613 40.909 0.00 0.00 0.00 2.71
719 720 3.874383 TGTGATCCCAGGAAGAAACAA 57.126 42.857 0.00 0.00 0.00 2.83
720 721 3.117701 TGTTGTGATCCCAGGAAGAAACA 60.118 43.478 0.00 0.00 0.00 2.83
721 722 3.253432 GTGTTGTGATCCCAGGAAGAAAC 59.747 47.826 0.00 0.00 0.00 2.78
722 723 3.138283 AGTGTTGTGATCCCAGGAAGAAA 59.862 43.478 0.00 0.00 0.00 2.52
723 724 2.711009 AGTGTTGTGATCCCAGGAAGAA 59.289 45.455 0.00 0.00 0.00 2.52
724 725 2.303022 GAGTGTTGTGATCCCAGGAAGA 59.697 50.000 0.00 0.00 0.00 2.87
725 726 2.038952 TGAGTGTTGTGATCCCAGGAAG 59.961 50.000 0.00 0.00 0.00 3.46
726 727 2.054021 TGAGTGTTGTGATCCCAGGAA 58.946 47.619 0.00 0.00 0.00 3.36
727 728 1.728323 TGAGTGTTGTGATCCCAGGA 58.272 50.000 0.00 0.00 0.00 3.86
728 729 2.238144 AGATGAGTGTTGTGATCCCAGG 59.762 50.000 0.00 0.00 0.00 4.45
729 730 3.197333 AGAGATGAGTGTTGTGATCCCAG 59.803 47.826 0.00 0.00 0.00 4.45
730 731 3.176411 AGAGATGAGTGTTGTGATCCCA 58.824 45.455 0.00 0.00 0.00 4.37
731 732 3.450457 AGAGAGATGAGTGTTGTGATCCC 59.550 47.826 0.00 0.00 0.00 3.85
732 733 4.441356 GGAGAGAGATGAGTGTTGTGATCC 60.441 50.000 0.00 0.00 0.00 3.36
733 734 4.402155 AGGAGAGAGATGAGTGTTGTGATC 59.598 45.833 0.00 0.00 0.00 2.92
734 735 4.352009 AGGAGAGAGATGAGTGTTGTGAT 58.648 43.478 0.00 0.00 0.00 3.06
735 736 3.761218 GAGGAGAGAGATGAGTGTTGTGA 59.239 47.826 0.00 0.00 0.00 3.58
736 737 3.763360 AGAGGAGAGAGATGAGTGTTGTG 59.237 47.826 0.00 0.00 0.00 3.33
737 738 4.046286 AGAGGAGAGAGATGAGTGTTGT 57.954 45.455 0.00 0.00 0.00 3.32
738 739 6.522625 TTAAGAGGAGAGAGATGAGTGTTG 57.477 41.667 0.00 0.00 0.00 3.33
739 740 7.732222 ATTTAAGAGGAGAGAGATGAGTGTT 57.268 36.000 0.00 0.00 0.00 3.32
740 741 8.691797 GTTATTTAAGAGGAGAGAGATGAGTGT 58.308 37.037 0.00 0.00 0.00 3.55
741 742 8.690884 TGTTATTTAAGAGGAGAGAGATGAGTG 58.309 37.037 0.00 0.00 0.00 3.51
742 743 8.830915 TGTTATTTAAGAGGAGAGAGATGAGT 57.169 34.615 0.00 0.00 0.00 3.41
743 744 9.695526 CATGTTATTTAAGAGGAGAGAGATGAG 57.304 37.037 0.00 0.00 0.00 2.90
744 745 8.147058 GCATGTTATTTAAGAGGAGAGAGATGA 58.853 37.037 0.00 0.00 0.00 2.92
745 746 7.387397 GGCATGTTATTTAAGAGGAGAGAGATG 59.613 40.741 0.00 0.00 0.00 2.90
746 747 7.071698 TGGCATGTTATTTAAGAGGAGAGAGAT 59.928 37.037 0.00 0.00 0.00 2.75
747 748 6.384015 TGGCATGTTATTTAAGAGGAGAGAGA 59.616 38.462 0.00 0.00 0.00 3.10
748 749 6.481644 GTGGCATGTTATTTAAGAGGAGAGAG 59.518 42.308 0.00 0.00 0.00 3.20
749 750 6.070251 TGTGGCATGTTATTTAAGAGGAGAGA 60.070 38.462 0.00 0.00 0.00 3.10
750 751 6.115446 TGTGGCATGTTATTTAAGAGGAGAG 58.885 40.000 0.00 0.00 0.00 3.20
751 752 6.061022 TGTGGCATGTTATTTAAGAGGAGA 57.939 37.500 0.00 0.00 0.00 3.71
752 753 6.543465 TGATGTGGCATGTTATTTAAGAGGAG 59.457 38.462 0.00 0.00 0.00 3.69
753 754 6.422333 TGATGTGGCATGTTATTTAAGAGGA 58.578 36.000 0.00 0.00 0.00 3.71
754 755 6.543465 TCTGATGTGGCATGTTATTTAAGAGG 59.457 38.462 0.00 0.00 0.00 3.69
755 756 7.558161 TCTGATGTGGCATGTTATTTAAGAG 57.442 36.000 0.00 0.00 0.00 2.85
756 757 8.523915 AATCTGATGTGGCATGTTATTTAAGA 57.476 30.769 0.00 0.00 0.00 2.10
757 758 9.590451 AAAATCTGATGTGGCATGTTATTTAAG 57.410 29.630 0.00 0.00 0.00 1.85
758 759 9.941325 AAAAATCTGATGTGGCATGTTATTTAA 57.059 25.926 0.00 0.00 0.00 1.52
781 782 3.775261 AGCCTTCCACGTAGGTAAAAA 57.225 42.857 4.81 0.00 39.02 1.94
782 783 3.775261 AAGCCTTCCACGTAGGTAAAA 57.225 42.857 4.81 0.00 39.02 1.52
783 784 3.834231 ACTAAGCCTTCCACGTAGGTAAA 59.166 43.478 4.81 0.00 39.02 2.01
784 785 3.434309 ACTAAGCCTTCCACGTAGGTAA 58.566 45.455 4.81 0.00 39.02 2.85
785 786 3.091633 ACTAAGCCTTCCACGTAGGTA 57.908 47.619 4.81 0.00 39.02 3.08
786 787 1.934410 ACTAAGCCTTCCACGTAGGT 58.066 50.000 4.81 0.00 39.02 3.08
787 788 2.100418 GGTACTAAGCCTTCCACGTAGG 59.900 54.545 0.00 0.00 39.47 3.18
788 789 3.022406 AGGTACTAAGCCTTCCACGTAG 58.978 50.000 0.00 0.00 36.02 3.51
789 790 2.756760 CAGGTACTAAGCCTTCCACGTA 59.243 50.000 0.00 0.00 36.02 3.57
790 791 1.549170 CAGGTACTAAGCCTTCCACGT 59.451 52.381 0.00 0.00 36.02 4.49
791 792 1.549170 ACAGGTACTAAGCCTTCCACG 59.451 52.381 0.00 0.00 36.02 4.94
792 793 3.132467 CCTACAGGTACTAAGCCTTCCAC 59.868 52.174 0.00 0.00 36.02 4.02
793 794 3.371965 CCTACAGGTACTAAGCCTTCCA 58.628 50.000 0.00 0.00 36.02 3.53
807 808 2.366916 CTCCTAATGCTCCACCTACAGG 59.633 54.545 0.00 0.00 42.17 4.00
808 809 2.366916 CCTCCTAATGCTCCACCTACAG 59.633 54.545 0.00 0.00 0.00 2.74
809 810 2.398588 CCTCCTAATGCTCCACCTACA 58.601 52.381 0.00 0.00 0.00 2.74
810 811 1.694696 CCCTCCTAATGCTCCACCTAC 59.305 57.143 0.00 0.00 0.00 3.18
811 812 1.414538 CCCCTCCTAATGCTCCACCTA 60.415 57.143 0.00 0.00 0.00 3.08
812 813 0.695803 CCCCTCCTAATGCTCCACCT 60.696 60.000 0.00 0.00 0.00 4.00
813 814 1.839894 CCCCTCCTAATGCTCCACC 59.160 63.158 0.00 0.00 0.00 4.61
814 815 1.149401 GCCCCTCCTAATGCTCCAC 59.851 63.158 0.00 0.00 0.00 4.02
815 816 2.078665 GGCCCCTCCTAATGCTCCA 61.079 63.158 0.00 0.00 0.00 3.86
816 817 0.473886 TAGGCCCCTCCTAATGCTCC 60.474 60.000 0.00 0.00 45.41 4.70
817 818 3.165657 TAGGCCCCTCCTAATGCTC 57.834 57.895 0.00 0.00 45.41 4.26
823 824 1.152525 CGCTCTTAGGCCCCTCCTA 60.153 63.158 0.00 0.00 45.41 2.94
825 826 3.551407 CCGCTCTTAGGCCCCTCC 61.551 72.222 0.00 0.00 0.00 4.30
826 827 2.368011 AACCGCTCTTAGGCCCCTC 61.368 63.158 0.00 0.00 0.00 4.30
827 828 2.285442 AACCGCTCTTAGGCCCCT 60.285 61.111 0.00 0.00 0.00 4.79
828 829 2.124695 CAACCGCTCTTAGGCCCC 60.125 66.667 0.00 0.00 0.00 5.80
829 830 2.824489 GCAACCGCTCTTAGGCCC 60.824 66.667 0.00 0.00 34.30 5.80
830 831 3.195698 CGCAACCGCTCTTAGGCC 61.196 66.667 0.00 0.00 35.30 5.19
857 858 1.139853 GGCAGATGAGGACGGAAAGAT 59.860 52.381 0.00 0.00 0.00 2.40
894 895 5.638657 GGAGAGACGACTATTCTATTCGCTA 59.361 44.000 0.00 0.00 34.67 4.26
901 902 3.434739 GGGGTGGAGAGACGACTATTCTA 60.435 52.174 0.00 0.00 0.00 2.10
906 907 0.702902 AAGGGGTGGAGAGACGACTA 59.297 55.000 0.00 0.00 0.00 2.59
941 944 2.567615 GAGAAGCCAAGGAGGTGAAGTA 59.432 50.000 0.00 0.00 40.61 2.24
945 952 1.556911 GATGAGAAGCCAAGGAGGTGA 59.443 52.381 0.00 0.00 40.61 4.02
1064 1073 4.513198 TTTGATAGGCGAACCAAAAAGG 57.487 40.909 0.00 0.00 45.67 3.11
1122 1131 1.398390 GATCGATTTGGTGTGGACTGC 59.602 52.381 0.00 0.00 0.00 4.40
1153 1162 3.493830 TTGTGCCGCTCGTCTCGTT 62.494 57.895 0.00 0.00 0.00 3.85
1159 1168 4.299547 TCTGCTTGTGCCGCTCGT 62.300 61.111 0.00 0.00 38.71 4.18
1164 1173 3.114616 CCTCGTCTGCTTGTGCCG 61.115 66.667 0.00 0.00 38.71 5.69
1186 1195 1.610522 GCCAGCAACAACATCAAGTCT 59.389 47.619 0.00 0.00 0.00 3.24
1388 1411 0.461961 GTTGTCCCTCCTGATCTCCG 59.538 60.000 0.00 0.00 0.00 4.63
1575 1688 2.751259 ACGCAACTACGAGAAGGTCATA 59.249 45.455 0.00 0.00 36.70 2.15
1579 1692 1.338973 TGAACGCAACTACGAGAAGGT 59.661 47.619 0.00 0.00 36.70 3.50
1595 1708 5.355596 CCTCACAGATCCAATAGTCTGAAC 58.644 45.833 9.15 0.00 43.50 3.18
1614 1735 2.036571 CGCTGTTGCTGATGCCTCA 61.037 57.895 0.00 0.00 38.71 3.86
1790 1915 7.040478 TGGGTTTCATGTTACTTCTTCAATGAG 60.040 37.037 0.00 0.00 0.00 2.90
1833 1960 3.142951 TGTAAAGGTAATGTGCGTGCTT 58.857 40.909 0.00 0.00 0.00 3.91
1844 1971 7.124448 ACCCAAACTGTCAAATTGTAAAGGTAA 59.876 33.333 0.00 0.00 0.00 2.85
1939 2066 5.592054 ACATTCATCTAGATGTGGTGTACG 58.408 41.667 27.80 13.54 39.72 3.67
2126 2273 7.546250 AGATGTACTTATTCTGGGTATGAGG 57.454 40.000 0.00 0.00 0.00 3.86
2153 2300 7.216920 AGCATTGTTTACGAAAACTGAAAAC 57.783 32.000 0.00 0.00 44.44 2.43
2231 2395 6.990341 TGAGAGTGAATGACATAATTGTGG 57.010 37.500 7.15 0.00 35.79 4.17
2234 2398 7.470079 CAGGTTGAGAGTGAATGACATAATTG 58.530 38.462 0.00 0.00 0.00 2.32
2237 2401 4.937620 GCAGGTTGAGAGTGAATGACATAA 59.062 41.667 0.00 0.00 0.00 1.90
2327 2495 9.657121 GTGCTTAGCTAATTCATATTTCTGAAC 57.343 33.333 6.64 0.00 37.93 3.18
2396 2565 6.127196 ACCTGAGGAGCAAACAAAAATAAACA 60.127 34.615 4.99 0.00 0.00 2.83
2434 2603 6.431234 ACAGAGGTTGATTAGGACAAATTGAC 59.569 38.462 0.00 0.00 0.00 3.18
2613 2802 0.109319 GTTTACACAAGCCCATGCGG 60.109 55.000 0.00 0.00 44.33 5.69
2615 2804 1.669795 GCTGTTTACACAAGCCCATGC 60.670 52.381 0.00 0.00 37.95 4.06
2625 2814 6.347725 CCTGAACTTCATGTAGCTGTTTACAC 60.348 42.308 0.00 0.00 36.45 2.90
2665 2854 8.559536 TGATGAAAGTAAACTGAACTTGATGTC 58.440 33.333 0.00 0.00 37.26 3.06
2746 2936 8.900781 AGGCATGCATATATATTAGCTTTTGAG 58.099 33.333 21.36 0.00 0.00 3.02
2945 3168 1.339535 GGAGAGAAAAGGCAGGAGTGG 60.340 57.143 0.00 0.00 0.00 4.00
3013 3237 8.342634 TGTGCTCTCTAAATAAGTTTGTCAAAC 58.657 33.333 18.90 18.90 41.69 2.93
3139 3395 6.452242 TCACAGTTGTCGAATGTAAGTATGT 58.548 36.000 0.00 0.00 0.00 2.29
3141 3397 7.705325 GGTATCACAGTTGTCGAATGTAAGTAT 59.295 37.037 0.00 0.00 0.00 2.12
3143 3399 5.867716 GGTATCACAGTTGTCGAATGTAAGT 59.132 40.000 0.00 0.00 0.00 2.24
3144 3400 5.867174 TGGTATCACAGTTGTCGAATGTAAG 59.133 40.000 0.00 0.00 0.00 2.34
3218 3498 2.209838 ATCATCCGACACTTGTAGCG 57.790 50.000 0.00 0.00 0.00 4.26
3222 3502 2.485426 CAGCAAATCATCCGACACTTGT 59.515 45.455 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.