Multiple sequence alignment - TraesCS1A01G309700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G309700 chr1A 100.000 4368 0 0 1 4368 500566276 500561909 0.000000e+00 8067
1 TraesCS1A01G309700 chr1A 87.820 665 78 1 2686 3350 452020221 452020882 0.000000e+00 776
2 TraesCS1A01G309700 chr1A 86.284 401 55 0 997 1397 452018573 452018973 1.870000e-118 436
3 TraesCS1A01G309700 chr1B 89.473 4455 262 96 1 4366 545000046 544995710 0.000000e+00 5437
4 TraesCS1A01G309700 chr1B 88.351 661 74 1 2686 3346 473824102 473824759 0.000000e+00 791
5 TraesCS1A01G309700 chr1B 86.783 401 53 0 997 1397 473822304 473822704 8.620000e-122 448
6 TraesCS1A01G309700 chr1D 90.918 3953 220 79 1 3878 405113791 405109903 0.000000e+00 5182
7 TraesCS1A01G309700 chr1D 88.200 661 75 1 2686 3346 351247234 351247891 0.000000e+00 785
8 TraesCS1A01G309700 chr1D 86.534 401 54 0 997 1397 351245578 351245978 4.010000e-120 442
9 TraesCS1A01G309700 chr1D 90.148 203 8 6 3954 4149 405109871 405109674 2.020000e-63 254
10 TraesCS1A01G309700 chr1D 86.034 179 10 13 4189 4364 405109675 405109509 1.250000e-40 178
11 TraesCS1A01G309700 chr2B 82.447 1504 207 35 813 2288 59178896 59180370 0.000000e+00 1262
12 TraesCS1A01G309700 chr2B 90.000 130 12 1 2164 2292 12700431 12700560 2.700000e-37 167
13 TraesCS1A01G309700 chrUn 89.942 686 66 2 2686 3368 126674860 126675545 0.000000e+00 881
14 TraesCS1A01G309700 chr4B 90.476 672 58 5 2698 3363 654036838 654036167 0.000000e+00 881
15 TraesCS1A01G309700 chr5A 90.356 674 59 2 2698 3368 691670159 691669489 0.000000e+00 880
16 TraesCS1A01G309700 chr4D 87.834 674 79 2 2684 3357 6898877 6899547 0.000000e+00 787
17 TraesCS1A01G309700 chr3B 84.792 697 83 12 699 1386 11656385 11657067 0.000000e+00 678
18 TraesCS1A01G309700 chr3B 82.276 615 86 19 1687 2292 265730833 265730233 1.080000e-140 510
19 TraesCS1A01G309700 chr3B 88.702 416 45 2 988 1402 575256237 575256651 1.400000e-139 507
20 TraesCS1A01G309700 chr3B 92.014 288 23 0 1917 2204 575257092 575257379 5.260000e-109 405
21 TraesCS1A01G309700 chr3B 84.000 175 26 2 2291 2465 265730187 265730015 2.700000e-37 167
22 TraesCS1A01G309700 chr4A 83.415 615 79 19 1687 2292 20575882 20575282 2.300000e-152 549
23 TraesCS1A01G309700 chr4A 84.571 175 25 2 2291 2465 20575236 20575064 5.810000e-39 172
24 TraesCS1A01G309700 chr3D 89.904 416 40 2 988 1402 438942159 438942573 6.430000e-148 534
25 TraesCS1A01G309700 chr3D 92.014 288 23 0 1917 2204 438943037 438943324 5.260000e-109 405
26 TraesCS1A01G309700 chr3A 89.951 408 40 1 998 1405 578873651 578874057 3.870000e-145 525
27 TraesCS1A01G309700 chr3A 90.625 288 27 0 1917 2204 578874488 578874775 2.460000e-102 383
28 TraesCS1A01G309700 chr7D 81.786 280 51 0 1927 2206 573692842 573693121 7.300000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G309700 chr1A 500561909 500566276 4367 True 8067.000000 8067 100.000000 1 4368 1 chr1A.!!$R1 4367
1 TraesCS1A01G309700 chr1A 452018573 452020882 2309 False 606.000000 776 87.052000 997 3350 2 chr1A.!!$F1 2353
2 TraesCS1A01G309700 chr1B 544995710 545000046 4336 True 5437.000000 5437 89.473000 1 4366 1 chr1B.!!$R1 4365
3 TraesCS1A01G309700 chr1B 473822304 473824759 2455 False 619.500000 791 87.567000 997 3346 2 chr1B.!!$F1 2349
4 TraesCS1A01G309700 chr1D 405109509 405113791 4282 True 1871.333333 5182 89.033333 1 4364 3 chr1D.!!$R1 4363
5 TraesCS1A01G309700 chr1D 351245578 351247891 2313 False 613.500000 785 87.367000 997 3346 2 chr1D.!!$F1 2349
6 TraesCS1A01G309700 chr2B 59178896 59180370 1474 False 1262.000000 1262 82.447000 813 2288 1 chr2B.!!$F2 1475
7 TraesCS1A01G309700 chrUn 126674860 126675545 685 False 881.000000 881 89.942000 2686 3368 1 chrUn.!!$F1 682
8 TraesCS1A01G309700 chr4B 654036167 654036838 671 True 881.000000 881 90.476000 2698 3363 1 chr4B.!!$R1 665
9 TraesCS1A01G309700 chr5A 691669489 691670159 670 True 880.000000 880 90.356000 2698 3368 1 chr5A.!!$R1 670
10 TraesCS1A01G309700 chr4D 6898877 6899547 670 False 787.000000 787 87.834000 2684 3357 1 chr4D.!!$F1 673
11 TraesCS1A01G309700 chr3B 11656385 11657067 682 False 678.000000 678 84.792000 699 1386 1 chr3B.!!$F1 687
12 TraesCS1A01G309700 chr3B 575256237 575257379 1142 False 456.000000 507 90.358000 988 2204 2 chr3B.!!$F2 1216
13 TraesCS1A01G309700 chr3B 265730015 265730833 818 True 338.500000 510 83.138000 1687 2465 2 chr3B.!!$R1 778
14 TraesCS1A01G309700 chr4A 20575064 20575882 818 True 360.500000 549 83.993000 1687 2465 2 chr4A.!!$R1 778
15 TraesCS1A01G309700 chr3D 438942159 438943324 1165 False 469.500000 534 90.959000 988 2204 2 chr3D.!!$F1 1216
16 TraesCS1A01G309700 chr3A 578873651 578874775 1124 False 454.000000 525 90.288000 998 2204 2 chr3A.!!$F1 1206

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 247 0.242825 CTCGCCACTCGTAAGTTCCA 59.757 55.000 0.00 0.00 39.67 3.53 F
272 277 0.738389 CCCGAATTTACTTGCGCCAT 59.262 50.000 4.18 0.00 0.00 4.40 F
323 328 1.060698 GCGTATGAGTCGGTGCTTTTC 59.939 52.381 0.00 0.00 0.00 2.29 F
615 622 1.151679 TTCATGCCGTGGTTTCCCA 59.848 52.632 0.00 0.00 38.87 4.37 F
796 809 1.217882 AGTAGCTTGCACGTGAACAC 58.782 50.000 22.23 2.82 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 2193 2.623878 TTCAAGTGGACAGCGGTAAA 57.376 45.000 0.0 0.0 0.00 2.01 R
1883 2199 9.294030 CTTAAATAATGATTTCAAGTGGACAGC 57.706 33.333 0.0 0.0 36.62 4.40 R
2511 3648 4.843220 AGCAAAATCTCAACCAAGACAG 57.157 40.909 0.0 0.0 0.00 3.51 R
2785 3925 0.256177 GGAAGGGGATCAGGTTCACC 59.744 60.000 0.0 0.0 39.69 4.02 R
3372 4518 1.734477 CACGGAACAGACCTCGCTG 60.734 63.158 0.0 0.0 41.63 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
122 123 6.743853 TCCCCCTCCTACGGCTATATATATAT 59.256 42.308 10.10 10.10 0.00 0.86
123 124 7.913855 TCCCCCTCCTACGGCTATATATATATA 59.086 40.741 11.21 11.21 0.00 0.86
205 207 2.960688 GCCACACTCCTCACTCCCC 61.961 68.421 0.00 0.00 0.00 4.81
215 217 2.281761 CACTCCCCACTGCGCTTT 60.282 61.111 9.73 0.00 0.00 3.51
216 218 2.032681 ACTCCCCACTGCGCTTTC 59.967 61.111 9.73 0.00 0.00 2.62
220 222 2.357517 CCCACTGCGCTTTCTCGT 60.358 61.111 9.73 0.00 0.00 4.18
221 223 2.383527 CCCACTGCGCTTTCTCGTC 61.384 63.158 9.73 0.00 0.00 4.20
222 224 2.720758 CCACTGCGCTTTCTCGTCG 61.721 63.158 9.73 0.00 0.00 5.12
244 247 0.242825 CTCGCCACTCGTAAGTTCCA 59.757 55.000 0.00 0.00 39.67 3.53
253 257 2.413453 CTCGTAAGTTCCAAGCTGCTTC 59.587 50.000 12.82 0.97 39.48 3.86
255 259 1.813178 GTAAGTTCCAAGCTGCTTCCC 59.187 52.381 12.82 0.66 0.00 3.97
262 267 2.091541 CCAAGCTGCTTCCCGAATTTA 58.908 47.619 12.82 0.00 0.00 1.40
266 271 2.749621 AGCTGCTTCCCGAATTTACTTG 59.250 45.455 0.00 0.00 0.00 3.16
272 277 0.738389 CCCGAATTTACTTGCGCCAT 59.262 50.000 4.18 0.00 0.00 4.40
290 295 3.984633 GCCATTGCGTTCTAGACTAGATC 59.015 47.826 12.98 11.11 34.22 2.75
293 298 4.902443 TTGCGTTCTAGACTAGATCTGG 57.098 45.455 12.98 4.69 38.49 3.86
295 300 5.032327 TGCGTTCTAGACTAGATCTGGTA 57.968 43.478 12.23 0.00 38.49 3.25
296 301 5.622180 TGCGTTCTAGACTAGATCTGGTAT 58.378 41.667 12.23 11.74 38.49 2.73
297 302 5.470437 TGCGTTCTAGACTAGATCTGGTATG 59.530 44.000 15.81 5.38 38.49 2.39
298 303 5.470777 GCGTTCTAGACTAGATCTGGTATGT 59.529 44.000 15.81 5.24 38.49 2.29
299 304 6.347888 GCGTTCTAGACTAGATCTGGTATGTC 60.348 46.154 15.81 10.44 38.49 3.06
300 305 6.128769 CGTTCTAGACTAGATCTGGTATGTCG 60.129 46.154 15.81 10.64 38.49 4.35
301 306 5.239351 TCTAGACTAGATCTGGTATGTCGC 58.761 45.833 15.81 1.31 38.49 5.19
302 307 4.093472 AGACTAGATCTGGTATGTCGCT 57.907 45.455 12.23 0.89 35.81 4.93
303 308 3.818210 AGACTAGATCTGGTATGTCGCTG 59.182 47.826 12.23 0.00 35.81 5.18
304 309 2.294791 ACTAGATCTGGTATGTCGCTGC 59.705 50.000 10.42 0.00 0.00 5.25
313 318 2.044860 GTATGTCGCTGCGTATGAGTC 58.955 52.381 22.48 4.55 0.00 3.36
323 328 1.060698 GCGTATGAGTCGGTGCTTTTC 59.939 52.381 0.00 0.00 0.00 2.29
440 447 1.437573 GTGGGATGCGTCGATCTGA 59.562 57.895 0.00 0.00 0.00 3.27
500 507 3.831911 TGGATCTGTTTTGTGGGGATTTC 59.168 43.478 0.00 0.00 0.00 2.17
573 580 3.108343 CGGAGGTGACGCGTCTAT 58.892 61.111 36.27 23.21 32.91 1.98
581 588 1.654105 GTGACGCGTCTATGTTTGGAG 59.346 52.381 36.27 0.00 0.00 3.86
592 599 3.947910 ATGTTTGGAGCAGATTTGGTG 57.052 42.857 0.00 0.00 34.61 4.17
615 622 1.151679 TTCATGCCGTGGTTTCCCA 59.848 52.632 0.00 0.00 38.87 4.37
631 638 6.180472 GGTTTCCCAACATTAGAGAATCTGA 58.820 40.000 0.00 0.00 39.59 3.27
659 666 4.511527 TGATTTCTGAGCACATCCTCTTC 58.488 43.478 0.00 0.00 33.02 2.87
673 680 6.997239 CATCCTCTTCAGATGTGATTTTGA 57.003 37.500 0.00 0.00 37.05 2.69
678 685 7.173907 TCCTCTTCAGATGTGATTTTGAGAAAC 59.826 37.037 11.48 0.00 30.85 2.78
694 701 7.739498 TTGAGAAACTTATCCTGGTGTTAAC 57.261 36.000 0.00 0.00 0.00 2.01
696 703 8.197592 TGAGAAACTTATCCTGGTGTTAACTA 57.802 34.615 7.22 0.00 0.00 2.24
704 712 3.160777 CTGGTGTTAACTAGGTAGGCG 57.839 52.381 7.22 0.00 31.49 5.52
713 725 2.713877 ACTAGGTAGGCGCTAGCTATC 58.286 52.381 13.93 9.43 43.21 2.08
735 747 2.545742 GGCTTGATTTTGCACCGTTCTT 60.546 45.455 0.00 0.00 0.00 2.52
796 809 1.217882 AGTAGCTTGCACGTGAACAC 58.782 50.000 22.23 2.82 0.00 3.32
822 840 5.239744 CGGACTATGTTGCTAGTCATAGAGT 59.760 44.000 24.32 14.10 46.23 3.24
893 913 3.753272 GCCAAACAAGTCAGATCTTGCTA 59.247 43.478 0.00 0.00 45.86 3.49
895 915 5.586243 GCCAAACAAGTCAGATCTTGCTATA 59.414 40.000 0.00 0.00 45.86 1.31
896 916 6.094048 GCCAAACAAGTCAGATCTTGCTATAA 59.906 38.462 0.00 0.00 45.86 0.98
1518 1706 7.218228 TGCAGATTTGAATTATGTTGTCACT 57.782 32.000 0.00 0.00 0.00 3.41
1569 1858 2.260844 ATGCCAGTAATGCTATGCGT 57.739 45.000 0.00 0.00 0.00 5.24
1592 1881 2.257353 GCCGTGGCATCTTCTGTTT 58.743 52.632 5.89 0.00 41.49 2.83
1632 1922 7.609918 TGTATAGCCATGATTACTTGTTTGTGT 59.390 33.333 0.00 0.00 0.00 3.72
1653 1943 7.058449 GTGTATAAGGGCACTGGTTGGAAAC 62.058 48.000 0.00 0.00 38.12 2.78
1738 2039 8.614469 TTGTTCTGTATTGTTGTCATGATACA 57.386 30.769 0.00 4.01 34.73 2.29
1751 2052 6.674066 TGTCATGATACATATTGCTTGCATG 58.326 36.000 0.00 0.00 34.70 4.06
1839 2155 9.817365 CTTTCATCTATTTGTGTCTAAACAGTG 57.183 33.333 0.00 0.00 35.64 3.66
1877 2193 7.735321 AGGGTGGTTATCTACTTATATTCAGCT 59.265 37.037 0.00 0.00 0.00 4.24
2543 3680 7.154656 GGTTGAGATTTTGCTTAAGTTGGATT 58.845 34.615 4.02 0.00 0.00 3.01
2656 3796 5.242393 AGAATTATGTTGCTTGCTGTGTCTT 59.758 36.000 0.00 0.00 0.00 3.01
2672 3812 7.013750 TGCTGTGTCTTAACATTTAACCATTCA 59.986 33.333 0.00 0.00 37.81 2.57
2785 3925 4.821589 GACCTCCGGAAGCTGGCG 62.822 72.222 5.23 0.00 0.00 5.69
3372 4518 2.446802 CCTCCAGGAGTAGGGGCC 60.447 72.222 15.86 0.00 37.39 5.80
3385 4535 4.021925 GGGCCAGCGAGGTCTGTT 62.022 66.667 4.39 0.00 43.45 3.16
3386 4536 2.435059 GGCCAGCGAGGTCTGTTC 60.435 66.667 0.00 0.00 39.61 3.18
3387 4537 2.435059 GCCAGCGAGGTCTGTTCC 60.435 66.667 0.00 0.00 40.61 3.62
3388 4538 2.125912 CCAGCGAGGTCTGTTCCG 60.126 66.667 0.00 0.00 32.32 4.30
3390 4540 1.734477 CAGCGAGGTCTGTTCCGTG 60.734 63.158 0.00 0.00 0.00 4.94
3391 4541 2.432628 GCGAGGTCTGTTCCGTGG 60.433 66.667 0.00 0.00 0.00 4.94
3392 4542 2.927580 GCGAGGTCTGTTCCGTGGA 61.928 63.158 0.00 0.00 0.00 4.02
3393 4543 1.890894 CGAGGTCTGTTCCGTGGAT 59.109 57.895 0.00 0.00 0.00 3.41
3394 4544 0.179134 CGAGGTCTGTTCCGTGGATC 60.179 60.000 0.00 0.00 0.00 3.36
3395 4545 1.187087 GAGGTCTGTTCCGTGGATCT 58.813 55.000 0.00 0.00 0.00 2.75
3396 4546 1.550976 GAGGTCTGTTCCGTGGATCTT 59.449 52.381 0.00 0.00 0.00 2.40
3397 4547 1.550976 AGGTCTGTTCCGTGGATCTTC 59.449 52.381 0.00 0.00 0.00 2.87
3399 4549 1.550976 GTCTGTTCCGTGGATCTTCCT 59.449 52.381 0.00 0.00 37.46 3.36
3402 4552 1.974957 TGTTCCGTGGATCTTCCTTGA 59.025 47.619 0.00 0.00 37.46 3.02
3403 4553 2.571653 TGTTCCGTGGATCTTCCTTGAT 59.428 45.455 0.00 0.00 37.46 2.57
3407 4557 2.418746 CCGTGGATCTTCCTTGATCGTT 60.419 50.000 0.00 0.00 42.63 3.85
3408 4558 2.604914 CGTGGATCTTCCTTGATCGTTG 59.395 50.000 0.00 0.00 42.63 4.10
3409 4559 2.352960 GTGGATCTTCCTTGATCGTTGC 59.647 50.000 0.00 0.00 42.63 4.17
3411 4561 1.943340 GATCTTCCTTGATCGTTGCCC 59.057 52.381 0.00 0.00 34.34 5.36
3433 4587 1.517242 GGCTATTTCTGATGGCTCCG 58.483 55.000 0.00 0.00 0.00 4.63
3535 4701 4.062991 AGTTTGTCTGTGTCGGGTTAATC 58.937 43.478 0.00 0.00 0.00 1.75
3588 4767 9.988815 AGATCTTAGTAGCAGGTTTGTAATATG 57.011 33.333 0.00 0.00 0.00 1.78
3589 4768 9.765795 GATCTTAGTAGCAGGTTTGTAATATGT 57.234 33.333 0.00 0.00 0.00 2.29
3590 4769 9.765795 ATCTTAGTAGCAGGTTTGTAATATGTC 57.234 33.333 0.00 0.00 0.00 3.06
3612 4791 4.141321 TCTGGCTCTGAATCCTAATGCAAT 60.141 41.667 0.00 0.00 0.00 3.56
3695 4889 1.434622 GCAGTGGACTGGATGCATCG 61.435 60.000 20.15 10.12 43.94 3.84
3698 4892 0.811616 GTGGACTGGATGCATCGGTC 60.812 60.000 28.26 28.26 32.98 4.79
3701 4895 2.202919 CTGGATGCATCGGTCGCA 60.203 61.111 20.15 11.00 44.94 5.10
3703 4897 2.202932 GGATGCATCGGTCGCAGT 60.203 61.111 20.15 0.00 43.88 4.40
3704 4898 1.815421 GGATGCATCGGTCGCAGTT 60.815 57.895 20.15 0.00 43.88 3.16
3705 4899 1.369091 GGATGCATCGGTCGCAGTTT 61.369 55.000 20.15 0.00 43.88 2.66
3706 4900 0.026803 GATGCATCGGTCGCAGTTTC 59.973 55.000 11.68 0.00 43.88 2.78
3708 4902 0.602638 TGCATCGGTCGCAGTTTCTT 60.603 50.000 0.00 0.00 33.55 2.52
3710 4904 1.714794 CATCGGTCGCAGTTTCTTCT 58.285 50.000 0.00 0.00 0.00 2.85
3713 4907 2.557317 TCGGTCGCAGTTTCTTCTTTT 58.443 42.857 0.00 0.00 0.00 2.27
3720 4915 3.384668 GCAGTTTCTTCTTTTTCCTGCC 58.615 45.455 0.00 0.00 38.25 4.85
3778 4980 0.163788 GTCGGCATCGTTTGACACTG 59.836 55.000 0.00 0.00 37.69 3.66
3779 4981 1.154413 CGGCATCGTTTGACACTGC 60.154 57.895 0.00 0.00 29.94 4.40
3800 5024 3.488384 GCCTGTCTATCTCGTTGTCTCTG 60.488 52.174 0.00 0.00 0.00 3.35
3802 5026 2.423892 TGTCTATCTCGTTGTCTCTGGC 59.576 50.000 0.00 0.00 0.00 4.85
3846 5076 2.229062 CGGCAGTGATATCGTATCTGGT 59.771 50.000 14.29 0.00 0.00 4.00
3893 5135 1.296715 CCAAGCTACAAGGACGGCT 59.703 57.895 0.00 0.00 36.53 5.52
3894 5136 0.741221 CCAAGCTACAAGGACGGCTC 60.741 60.000 0.00 0.00 33.63 4.70
3907 5149 3.703127 GGCTCGTCCCCGAACCTT 61.703 66.667 0.00 0.00 44.21 3.50
3908 5150 2.353610 GGCTCGTCCCCGAACCTTA 61.354 63.158 0.00 0.00 44.21 2.69
3909 5151 1.683418 GGCTCGTCCCCGAACCTTAT 61.683 60.000 0.00 0.00 44.21 1.73
3910 5152 1.035139 GCTCGTCCCCGAACCTTATA 58.965 55.000 0.00 0.00 43.69 0.98
3911 5153 1.269465 GCTCGTCCCCGAACCTTATAC 60.269 57.143 0.00 0.00 43.69 1.47
3912 5154 2.305009 CTCGTCCCCGAACCTTATACT 58.695 52.381 0.00 0.00 43.69 2.12
3913 5155 3.480470 CTCGTCCCCGAACCTTATACTA 58.520 50.000 0.00 0.00 43.69 1.82
3914 5156 3.214328 TCGTCCCCGAACCTTATACTAC 58.786 50.000 0.00 0.00 40.86 2.73
3915 5157 3.117888 TCGTCCCCGAACCTTATACTACT 60.118 47.826 0.00 0.00 40.86 2.57
3942 5184 1.339610 CTAGGCTGCTAGCTGGTAGTG 59.660 57.143 21.46 9.45 41.99 2.74
3990 5232 5.238432 AGCAATCGTTTTCATGTCTTGTGTA 59.762 36.000 0.00 0.00 0.00 2.90
3991 5233 5.339611 GCAATCGTTTTCATGTCTTGTGTAC 59.660 40.000 0.00 0.00 0.00 2.90
3992 5234 6.658831 CAATCGTTTTCATGTCTTGTGTACT 58.341 36.000 0.00 0.00 0.00 2.73
3996 5238 5.558273 CGTTTTCATGTCTTGTGTACTCACC 60.558 44.000 0.00 0.00 43.26 4.02
3997 5239 4.681074 TTCATGTCTTGTGTACTCACCA 57.319 40.909 0.00 0.00 43.26 4.17
3998 5240 3.990092 TCATGTCTTGTGTACTCACCAC 58.010 45.455 0.00 0.00 43.26 4.16
3999 5241 2.902705 TGTCTTGTGTACTCACCACC 57.097 50.000 0.00 0.00 43.26 4.61
4000 5242 2.112190 TGTCTTGTGTACTCACCACCA 58.888 47.619 0.00 0.00 43.26 4.17
4001 5243 2.102420 TGTCTTGTGTACTCACCACCAG 59.898 50.000 0.00 0.00 43.26 4.00
4002 5244 1.070134 TCTTGTGTACTCACCACCAGC 59.930 52.381 0.00 0.00 43.26 4.85
4003 5245 0.833949 TTGTGTACTCACCACCAGCA 59.166 50.000 0.00 0.00 43.26 4.41
4019 5268 2.273449 CATCACCACCCAGCCTCC 59.727 66.667 0.00 0.00 0.00 4.30
4020 5269 3.402681 ATCACCACCCAGCCTCCG 61.403 66.667 0.00 0.00 0.00 4.63
4090 5343 2.427506 GAGATTTCGGTTGGTTCTGCT 58.572 47.619 0.00 0.00 0.00 4.24
4095 5348 2.861462 TCGGTTGGTTCTGCTTTTTG 57.139 45.000 0.00 0.00 0.00 2.44
4096 5349 2.096248 TCGGTTGGTTCTGCTTTTTGT 58.904 42.857 0.00 0.00 0.00 2.83
4097 5350 2.159310 TCGGTTGGTTCTGCTTTTTGTG 60.159 45.455 0.00 0.00 0.00 3.33
4098 5351 1.933181 GGTTGGTTCTGCTTTTTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
4099 5352 1.587946 GTTGGTTCTGCTTTTTGTGCG 59.412 47.619 0.00 0.00 0.00 5.34
4100 5353 1.098869 TGGTTCTGCTTTTTGTGCGA 58.901 45.000 0.00 0.00 0.00 5.10
4101 5354 1.065401 TGGTTCTGCTTTTTGTGCGAG 59.935 47.619 0.00 0.00 0.00 5.03
4102 5355 1.123655 GTTCTGCTTTTTGTGCGAGC 58.876 50.000 0.00 0.00 36.95 5.03
4103 5356 1.024271 TTCTGCTTTTTGTGCGAGCT 58.976 45.000 0.00 0.00 37.32 4.09
4104 5357 1.024271 TCTGCTTTTTGTGCGAGCTT 58.976 45.000 0.00 0.00 37.32 3.74
4163 5416 3.431725 GGCGGCCTGTCGAAAAGG 61.432 66.667 12.87 10.46 37.91 3.11
4247 5500 1.977854 AGCCTACAGTTGACATGTCCA 59.022 47.619 22.85 9.66 32.02 4.02
4285 5548 1.982612 TCGAGAAAGATCACACAGCG 58.017 50.000 0.00 0.00 0.00 5.18
4286 5549 0.368227 CGAGAAAGATCACACAGCGC 59.632 55.000 0.00 0.00 0.00 5.92
4287 5550 1.719600 GAGAAAGATCACACAGCGCT 58.280 50.000 2.64 2.64 0.00 5.92
4290 5553 2.029020 AGAAAGATCACACAGCGCTACA 60.029 45.455 10.99 0.00 0.00 2.74
4291 5554 2.001812 AAGATCACACAGCGCTACAG 57.998 50.000 10.99 5.35 0.00 2.74
4292 5555 0.459237 AGATCACACAGCGCTACAGC 60.459 55.000 10.99 0.00 37.78 4.40
4293 5556 0.737367 GATCACACAGCGCTACAGCA 60.737 55.000 10.99 0.00 42.21 4.41
4294 5557 0.738762 ATCACACAGCGCTACAGCAG 60.739 55.000 10.99 0.00 42.21 4.24
4367 5633 9.950680 AAAACAGGAGATAATAATTTACATGCG 57.049 29.630 0.00 0.00 0.00 4.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 3.285215 GCTAGATCCGACGGCCGA 61.285 66.667 35.90 10.13 41.76 5.54
122 123 2.076184 CCGGGGGCAGGGAGAAATA 61.076 63.158 0.00 0.00 0.00 1.40
123 124 3.420482 CCGGGGGCAGGGAGAAAT 61.420 66.667 0.00 0.00 0.00 2.17
197 199 2.731691 GAAAGCGCAGTGGGGAGTGA 62.732 60.000 11.47 0.00 0.00 3.41
205 207 2.765785 CGACGAGAAAGCGCAGTG 59.234 61.111 11.47 0.00 33.86 3.66
222 224 3.248171 CTTACGAGTGGCGAGCGC 61.248 66.667 6.27 6.27 44.57 5.92
232 235 2.086054 AGCAGCTTGGAACTTACGAG 57.914 50.000 0.00 0.00 0.00 4.18
233 236 2.413837 GAAGCAGCTTGGAACTTACGA 58.586 47.619 13.91 0.00 0.00 3.43
244 247 3.073274 AGTAAATTCGGGAAGCAGCTT 57.927 42.857 7.60 7.60 0.00 3.74
253 257 0.738389 ATGGCGCAAGTAAATTCGGG 59.262 50.000 10.83 0.00 41.68 5.14
255 259 1.583404 GCAATGGCGCAAGTAAATTCG 59.417 47.619 10.83 0.00 41.68 3.34
272 277 4.270834 ACCAGATCTAGTCTAGAACGCAA 58.729 43.478 13.58 0.00 38.50 4.85
276 281 6.347888 GCGACATACCAGATCTAGTCTAGAAC 60.348 46.154 13.58 10.98 38.50 3.01
279 284 5.121611 CAGCGACATACCAGATCTAGTCTAG 59.878 48.000 0.00 0.00 34.69 2.43
284 289 2.666895 CGCAGCGACATACCAGATCTAG 60.667 54.545 9.98 0.00 0.00 2.43
285 290 1.266989 CGCAGCGACATACCAGATCTA 59.733 52.381 9.98 0.00 0.00 1.98
286 291 0.031314 CGCAGCGACATACCAGATCT 59.969 55.000 9.98 0.00 0.00 2.75
290 295 1.131771 CATACGCAGCGACATACCAG 58.868 55.000 24.65 0.00 0.00 4.00
293 298 2.044860 GACTCATACGCAGCGACATAC 58.955 52.381 24.65 2.71 0.00 2.39
295 300 0.592500 CGACTCATACGCAGCGACAT 60.593 55.000 24.65 11.40 0.00 3.06
296 301 1.226295 CGACTCATACGCAGCGACA 60.226 57.895 24.65 9.26 0.00 4.35
297 302 1.939785 CCGACTCATACGCAGCGAC 60.940 63.158 24.65 2.73 0.00 5.19
298 303 2.404186 ACCGACTCATACGCAGCGA 61.404 57.895 24.65 5.50 0.00 4.93
299 304 2.102357 ACCGACTCATACGCAGCG 59.898 61.111 14.82 14.82 0.00 5.18
300 305 2.517450 GCACCGACTCATACGCAGC 61.517 63.158 0.00 0.00 0.00 5.25
301 306 0.458543 AAGCACCGACTCATACGCAG 60.459 55.000 0.00 0.00 0.00 5.18
302 307 0.037697 AAAGCACCGACTCATACGCA 60.038 50.000 0.00 0.00 0.00 5.24
303 308 1.060698 GAAAAGCACCGACTCATACGC 59.939 52.381 0.00 0.00 0.00 4.42
304 309 1.659098 GGAAAAGCACCGACTCATACG 59.341 52.381 0.00 0.00 0.00 3.06
337 343 8.669394 ACGACCTCGATTTTTCAAATAAATTC 57.331 30.769 0.78 0.00 43.02 2.17
500 507 2.040544 AGGCGCAAAATCTGACGGG 61.041 57.895 10.83 0.00 0.00 5.28
573 580 1.340889 GCACCAAATCTGCTCCAAACA 59.659 47.619 0.00 0.00 0.00 2.83
581 588 3.733077 GCATGAACTAGCACCAAATCTGC 60.733 47.826 0.00 0.00 34.63 4.26
592 599 1.130561 GAAACCACGGCATGAACTAGC 59.869 52.381 0.00 0.00 0.00 3.42
615 622 6.715280 TCAGGCTTTCAGATTCTCTAATGTT 58.285 36.000 0.00 0.00 0.00 2.71
631 638 2.867624 TGTGCTCAGAAATCAGGCTTT 58.132 42.857 0.00 0.00 0.00 3.51
659 666 8.954350 AGGATAAGTTTCTCAAAATCACATCTG 58.046 33.333 0.00 0.00 0.00 2.90
673 680 7.237055 ACCTAGTTAACACCAGGATAAGTTTCT 59.763 37.037 21.25 0.00 32.25 2.52
678 685 6.462628 GCCTACCTAGTTAACACCAGGATAAG 60.463 46.154 21.25 15.59 32.25 1.73
682 689 3.102204 GCCTACCTAGTTAACACCAGGA 58.898 50.000 21.25 9.07 32.25 3.86
694 701 1.666700 CGATAGCTAGCGCCTACCTAG 59.333 57.143 19.44 0.00 36.60 3.02
696 703 0.961358 CCGATAGCTAGCGCCTACCT 60.961 60.000 25.30 0.00 36.60 3.08
713 725 0.318614 AACGGTGCAAAATCAAGCCG 60.319 50.000 6.58 6.58 44.10 5.52
720 732 7.961325 ATTCAAAATAAGAACGGTGCAAAAT 57.039 28.000 0.00 0.00 0.00 1.82
721 733 7.778470 AATTCAAAATAAGAACGGTGCAAAA 57.222 28.000 0.00 0.00 0.00 2.44
722 734 7.778470 AAATTCAAAATAAGAACGGTGCAAA 57.222 28.000 0.00 0.00 0.00 3.68
765 777 7.426456 CACGTGCAAGCTACTATTTAAAATGAG 59.574 37.037 0.82 0.00 0.00 2.90
777 790 1.202533 AGTGTTCACGTGCAAGCTACT 60.203 47.619 11.67 6.31 0.00 2.57
822 840 6.688073 TTTGGGGCTATTATGAAAACCAAA 57.312 33.333 0.00 0.00 42.49 3.28
838 858 3.721035 GCAATCATCAACTATTTGGGGC 58.279 45.455 0.00 0.00 33.06 5.80
1534 1722 8.746052 TTACTGGCATAACAAATATTGTAGCT 57.254 30.769 0.00 0.00 44.59 3.32
1547 1831 3.498397 ACGCATAGCATTACTGGCATAAC 59.502 43.478 0.00 0.00 32.12 1.89
1592 1881 7.501892 TCATGGCTATACAAAAAGATGCATACA 59.498 33.333 0.00 0.00 0.00 2.29
1632 1922 3.692690 GTTTCCAACCAGTGCCCTTATA 58.307 45.455 0.00 0.00 0.00 0.98
1653 1943 4.949856 ACCAAGTTATCCAAGTATGCAAGG 59.050 41.667 0.00 0.00 0.00 3.61
1655 1945 5.321102 ACACCAAGTTATCCAAGTATGCAA 58.679 37.500 0.00 0.00 0.00 4.08
1738 2039 5.648178 TTCACAAGACATGCAAGCAATAT 57.352 34.783 0.00 0.00 0.00 1.28
1747 2048 8.834465 ACTATCAGAATAATTCACAAGACATGC 58.166 33.333 0.00 0.00 0.00 4.06
1751 2052 9.809096 TCTCACTATCAGAATAATTCACAAGAC 57.191 33.333 0.00 0.00 0.00 3.01
1839 2155 7.317722 AGATAACCACCCTGAATAGATAACC 57.682 40.000 0.00 0.00 0.00 2.85
1877 2193 2.623878 TTCAAGTGGACAGCGGTAAA 57.376 45.000 0.00 0.00 0.00 2.01
1883 2199 9.294030 CTTAAATAATGATTTCAAGTGGACAGC 57.706 33.333 0.00 0.00 36.62 4.40
2511 3648 4.843220 AGCAAAATCTCAACCAAGACAG 57.157 40.909 0.00 0.00 0.00 3.51
2543 3680 6.345298 TGACAACTAACAGTCATTCTCACAA 58.655 36.000 0.00 0.00 39.65 3.33
2672 3812 4.973168 TCTCCAACTGCAGAAAGTAACAT 58.027 39.130 23.35 0.00 0.00 2.71
2678 3818 5.218139 GTTCAAATCTCCAACTGCAGAAAG 58.782 41.667 23.35 11.47 0.00 2.62
2785 3925 0.256177 GGAAGGGGATCAGGTTCACC 59.744 60.000 0.00 0.00 39.69 4.02
3372 4518 1.734477 CACGGAACAGACCTCGCTG 60.734 63.158 0.00 0.00 41.63 5.18
3385 4535 1.409064 CGATCAAGGAAGATCCACGGA 59.591 52.381 0.00 0.00 41.03 4.69
3386 4536 1.137086 ACGATCAAGGAAGATCCACGG 59.863 52.381 0.00 0.00 41.03 4.94
3387 4537 2.586258 ACGATCAAGGAAGATCCACG 57.414 50.000 0.00 0.00 41.03 4.94
3388 4538 2.352960 GCAACGATCAAGGAAGATCCAC 59.647 50.000 0.00 0.00 41.03 4.02
3390 4540 1.943340 GGCAACGATCAAGGAAGATCC 59.057 52.381 0.00 0.00 41.03 3.36
3391 4541 1.943340 GGGCAACGATCAAGGAAGATC 59.057 52.381 0.00 0.00 40.76 2.75
3392 4542 2.044123 GGGCAACGATCAAGGAAGAT 57.956 50.000 0.00 0.00 37.60 2.40
3393 4543 3.551259 GGGCAACGATCAAGGAAGA 57.449 52.632 0.00 0.00 37.60 2.87
3409 4559 0.250901 CCATCAGAAATAGCCCCGGG 60.251 60.000 15.80 15.80 0.00 5.73
3411 4561 0.109342 AGCCATCAGAAATAGCCCCG 59.891 55.000 0.00 0.00 0.00 5.73
3433 4587 4.680110 CACACACACTACTAGTAGCAACAC 59.320 45.833 26.54 0.00 36.66 3.32
3477 4640 2.126580 CGACACCCCGAAGACGAC 60.127 66.667 0.00 0.00 42.66 4.34
3478 4641 2.595463 ACGACACCCCGAAGACGA 60.595 61.111 0.00 0.00 42.66 4.20
3479 4642 2.430244 CACGACACCCCGAAGACG 60.430 66.667 0.00 0.00 39.43 4.18
3480 4643 2.048503 CCACGACACCCCGAAGAC 60.049 66.667 0.00 0.00 0.00 3.01
3535 4701 1.871039 CACCAACAAACTGACTACCGG 59.129 52.381 0.00 0.00 0.00 5.28
3587 4766 3.432749 GCATTAGGATTCAGAGCCAGACA 60.433 47.826 0.00 0.00 32.29 3.41
3588 4767 3.137533 GCATTAGGATTCAGAGCCAGAC 58.862 50.000 0.00 0.00 32.29 3.51
3589 4768 2.773661 TGCATTAGGATTCAGAGCCAGA 59.226 45.455 0.00 0.00 32.29 3.86
3590 4769 3.204306 TGCATTAGGATTCAGAGCCAG 57.796 47.619 0.00 0.00 32.29 4.85
3612 4791 6.449635 AACTATGTGAAGAAACAGCAAACA 57.550 33.333 0.00 0.00 32.52 2.83
3649 4828 2.979678 AGGTGGTGGAGTACTTGACAAT 59.020 45.455 0.00 0.00 0.00 2.71
3695 4889 3.315470 AGGAAAAAGAAGAAACTGCGACC 59.685 43.478 0.00 0.00 0.00 4.79
3698 4892 3.045688 GCAGGAAAAAGAAGAAACTGCG 58.954 45.455 0.00 0.00 40.12 5.18
3701 4895 3.066760 CGTGGCAGGAAAAAGAAGAAACT 59.933 43.478 0.00 0.00 0.00 2.66
3703 4897 3.020984 ACGTGGCAGGAAAAAGAAGAAA 58.979 40.909 14.98 0.00 0.00 2.52
3704 4898 2.616842 GACGTGGCAGGAAAAAGAAGAA 59.383 45.455 14.98 0.00 0.00 2.52
3705 4899 2.218603 GACGTGGCAGGAAAAAGAAGA 58.781 47.619 14.98 0.00 0.00 2.87
3706 4900 1.069906 CGACGTGGCAGGAAAAAGAAG 60.070 52.381 14.98 0.00 0.00 2.85
3708 4902 1.503818 GCGACGTGGCAGGAAAAAGA 61.504 55.000 18.28 0.00 0.00 2.52
3710 4904 2.548295 GGCGACGTGGCAGGAAAAA 61.548 57.895 24.18 0.00 44.08 1.94
3729 4924 1.693083 GGCACGTAACACATCGAGGC 61.693 60.000 0.00 0.00 36.40 4.70
3733 4928 1.355005 TCATGGCACGTAACACATCG 58.645 50.000 0.00 0.00 0.00 3.84
3778 4980 2.685897 AGAGACAACGAGATAGACAGGC 59.314 50.000 0.00 0.00 0.00 4.85
3779 4981 3.066064 CCAGAGACAACGAGATAGACAGG 59.934 52.174 0.00 0.00 0.00 4.00
3800 5024 2.747855 CCCGCTGAAGTCAAGGCC 60.748 66.667 0.00 0.00 0.00 5.19
3802 5026 2.747855 GGCCCGCTGAAGTCAAGG 60.748 66.667 0.00 0.00 0.00 3.61
3833 5063 3.069016 TGCGTCCAAACCAGATACGATAT 59.931 43.478 0.00 0.00 35.66 1.63
3871 5101 2.046314 TCCTTGTAGCTTGGCGCC 60.046 61.111 22.73 22.73 40.39 6.53
3897 5139 3.503748 CGGTAGTAGTATAAGGTTCGGGG 59.496 52.174 0.00 0.00 0.00 5.73
3898 5140 4.137543 ACGGTAGTAGTATAAGGTTCGGG 58.862 47.826 0.00 0.00 0.00 5.14
3899 5141 5.992217 AGTACGGTAGTAGTATAAGGTTCGG 59.008 44.000 0.00 0.00 34.90 4.30
3900 5142 7.329717 CCTAGTACGGTAGTAGTATAAGGTTCG 59.670 44.444 22.29 5.63 37.90 3.95
3901 5143 7.118535 GCCTAGTACGGTAGTAGTATAAGGTTC 59.881 44.444 22.29 1.17 37.90 3.62
3902 5144 6.937465 GCCTAGTACGGTAGTAGTATAAGGTT 59.063 42.308 22.29 0.00 37.90 3.50
3903 5145 6.271159 AGCCTAGTACGGTAGTAGTATAAGGT 59.729 42.308 22.29 12.81 37.90 3.50
3904 5146 6.593382 CAGCCTAGTACGGTAGTAGTATAAGG 59.407 46.154 22.29 13.46 37.90 2.69
3905 5147 6.091986 GCAGCCTAGTACGGTAGTAGTATAAG 59.908 46.154 22.29 11.78 37.90 1.73
3906 5148 5.934625 GCAGCCTAGTACGGTAGTAGTATAA 59.065 44.000 22.29 0.00 37.90 0.98
3907 5149 5.247110 AGCAGCCTAGTACGGTAGTAGTATA 59.753 44.000 22.29 0.00 37.90 1.47
3908 5150 4.041444 AGCAGCCTAGTACGGTAGTAGTAT 59.959 45.833 22.29 11.71 37.90 2.12
3909 5151 3.389329 AGCAGCCTAGTACGGTAGTAGTA 59.611 47.826 22.29 4.49 37.63 1.82
3910 5152 2.172293 AGCAGCCTAGTACGGTAGTAGT 59.828 50.000 22.29 7.89 39.62 2.73
3911 5153 2.848691 AGCAGCCTAGTACGGTAGTAG 58.151 52.381 18.93 18.93 32.77 2.57
3912 5154 3.805108 GCTAGCAGCCTAGTACGGTAGTA 60.805 52.174 10.63 2.90 42.51 1.82
3913 5155 2.848691 CTAGCAGCCTAGTACGGTAGT 58.151 52.381 0.55 0.55 36.99 2.73
3914 5156 1.536331 GCTAGCAGCCTAGTACGGTAG 59.464 57.143 10.63 0.00 42.51 3.18
3915 5157 1.142465 AGCTAGCAGCCTAGTACGGTA 59.858 52.381 18.83 0.00 43.77 4.02
3990 5232 1.376466 GGTGATGCTGGTGGTGAGT 59.624 57.895 0.00 0.00 0.00 3.41
3991 5233 0.957395 GTGGTGATGCTGGTGGTGAG 60.957 60.000 0.00 0.00 0.00 3.51
3992 5234 1.073025 GTGGTGATGCTGGTGGTGA 59.927 57.895 0.00 0.00 0.00 4.02
3996 5238 1.676635 CTGGGTGGTGATGCTGGTG 60.677 63.158 0.00 0.00 0.00 4.17
3997 5239 2.759114 CTGGGTGGTGATGCTGGT 59.241 61.111 0.00 0.00 0.00 4.00
3998 5240 2.753043 GCTGGGTGGTGATGCTGG 60.753 66.667 0.00 0.00 0.00 4.85
3999 5241 2.753043 GGCTGGGTGGTGATGCTG 60.753 66.667 0.00 0.00 0.00 4.41
4000 5242 2.937689 AGGCTGGGTGGTGATGCT 60.938 61.111 0.00 0.00 0.00 3.79
4001 5243 2.439156 GAGGCTGGGTGGTGATGC 60.439 66.667 0.00 0.00 0.00 3.91
4002 5244 2.273449 GGAGGCTGGGTGGTGATG 59.727 66.667 0.00 0.00 0.00 3.07
4003 5245 3.402681 CGGAGGCTGGGTGGTGAT 61.403 66.667 0.00 0.00 0.00 3.06
4019 5268 6.142480 CAGTTTCAGTAGGCGATAGATAAACG 59.858 42.308 0.00 0.00 39.76 3.60
4020 5269 7.201145 TCAGTTTCAGTAGGCGATAGATAAAC 58.799 38.462 0.00 0.00 39.76 2.01
4090 5343 3.729356 TGCAAAGCTCGCACAAAAA 57.271 42.105 6.68 0.00 33.55 1.94
4096 5349 2.256158 GCATGTGCAAAGCTCGCA 59.744 55.556 6.68 6.68 41.59 5.10
4138 5391 4.681978 ACAGGCCGCCTCACGTTC 62.682 66.667 9.68 0.00 41.42 3.95
4286 5549 1.207593 GCGTTTGGTGCTGCTGTAG 59.792 57.895 0.00 0.00 0.00 2.74
4287 5550 1.506309 CTGCGTTTGGTGCTGCTGTA 61.506 55.000 0.00 0.00 0.00 2.74
4290 5553 1.666209 AAACTGCGTTTGGTGCTGCT 61.666 50.000 0.00 0.00 34.23 4.24
4291 5554 0.030101 TAAACTGCGTTTGGTGCTGC 59.970 50.000 14.23 0.00 36.37 5.25
4292 5555 2.483583 TTAAACTGCGTTTGGTGCTG 57.516 45.000 14.23 0.00 36.37 4.41
4293 5556 2.164624 TGTTTAAACTGCGTTTGGTGCT 59.835 40.909 18.72 0.00 36.37 4.40
4294 5557 2.531206 TGTTTAAACTGCGTTTGGTGC 58.469 42.857 18.72 5.50 36.37 5.01
4295 5558 3.549873 CCTTGTTTAAACTGCGTTTGGTG 59.450 43.478 18.72 0.00 36.37 4.17
4296 5559 3.776340 CCTTGTTTAAACTGCGTTTGGT 58.224 40.909 18.72 0.00 36.37 3.67
4297 5560 2.538037 GCCTTGTTTAAACTGCGTTTGG 59.462 45.455 18.72 10.71 36.37 3.28
4298 5561 2.538037 GGCCTTGTTTAAACTGCGTTTG 59.462 45.455 18.72 2.89 36.37 2.93
4299 5562 2.482316 GGGCCTTGTTTAAACTGCGTTT 60.482 45.455 18.72 10.61 39.24 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.