Multiple sequence alignment - TraesCS1A01G308200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G308200 chr1A 100.000 3230 0 0 1 3230 499618673 499615444 0.000000e+00 5965.0
1 TraesCS1A01G308200 chr1A 95.221 544 21 3 2687 3230 517823425 517822887 0.000000e+00 856.0
2 TraesCS1A01G308200 chr1A 94.853 544 24 2 2687 3230 517856035 517855496 0.000000e+00 846.0
3 TraesCS1A01G308200 chr1A 97.505 481 11 1 1 481 570224808 570224329 0.000000e+00 821.0
4 TraesCS1A01G308200 chr1D 96.088 1508 48 5 887 2394 403940957 403939461 0.000000e+00 2447.0
5 TraesCS1A01G308200 chr1D 89.474 247 19 5 2383 2628 403939428 403939188 4.050000e-79 305.0
6 TraesCS1A01G308200 chr1B 94.004 1601 67 10 658 2234 543429904 543428309 0.000000e+00 2398.0
7 TraesCS1A01G308200 chr1B 97.619 42 1 0 2228 2269 543428203 543428162 4.470000e-09 73.1
8 TraesCS1A01G308200 chr4A 95.588 544 21 2 2688 3230 637247880 637248421 0.000000e+00 869.0
9 TraesCS1A01G308200 chr4A 95.212 543 23 1 2688 3230 29922330 29921791 0.000000e+00 856.0
10 TraesCS1A01G308200 chr4A 97.490 478 11 1 1 477 5408107 5407630 0.000000e+00 815.0
11 TraesCS1A01G308200 chrUn 95.580 543 21 1 2688 3230 190393196 190392657 0.000000e+00 867.0
12 TraesCS1A01G308200 chrUn 95.185 540 22 2 2688 3227 292034770 292035305 0.000000e+00 850.0
13 TraesCS1A01G308200 chrUn 95.028 543 24 1 2688 3230 467818671 467818132 0.000000e+00 850.0
14 TraesCS1A01G308200 chrUn 94.843 543 24 2 2688 3230 183464804 183465342 0.000000e+00 845.0
15 TraesCS1A01G308200 chr2A 95.028 543 23 2 2688 3230 22754601 22754063 0.000000e+00 850.0
16 TraesCS1A01G308200 chr2A 97.458 472 12 0 1 472 753482441 753481970 0.000000e+00 806.0
17 TraesCS1A01G308200 chr6A 97.505 481 11 1 1 481 67029919 67029440 0.000000e+00 821.0
18 TraesCS1A01G308200 chr2B 97.083 480 14 0 1 480 479850137 479849658 0.000000e+00 809.0
19 TraesCS1A01G308200 chr6B 97.263 475 12 1 1 474 626212908 626213382 0.000000e+00 804.0
20 TraesCS1A01G308200 chr5A 97.065 477 14 0 1 477 668187655 668187179 0.000000e+00 804.0
21 TraesCS1A01G308200 chr5A 79.350 523 82 12 1043 1548 485388322 485387809 8.580000e-91 344.0
22 TraesCS1A01G308200 chr5A 78.854 506 74 22 1038 1530 485469725 485469240 8.700000e-81 311.0
23 TraesCS1A01G308200 chr7A 96.875 480 14 1 1 479 129870379 129869900 0.000000e+00 802.0
24 TraesCS1A01G308200 chr5B 96.875 480 13 2 1 479 567583170 567582692 0.000000e+00 802.0
25 TraesCS1A01G308200 chr5B 79.730 518 85 14 1043 1544 461305495 461304982 1.100000e-94 357.0
26 TraesCS1A01G308200 chr5B 79.457 516 86 17 1041 1543 461545929 461545421 6.630000e-92 348.0
27 TraesCS1A01G308200 chr5B 76.731 520 98 19 1043 1548 461491875 461491365 5.310000e-68 268.0
28 TraesCS1A01G308200 chr5D 79.693 522 85 15 1043 1548 384480365 384479849 1.100000e-94 357.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G308200 chr1A 499615444 499618673 3229 True 5965.00 5965 100.0000 1 3230 1 chr1A.!!$R1 3229
1 TraesCS1A01G308200 chr1A 517822887 517823425 538 True 856.00 856 95.2210 2687 3230 1 chr1A.!!$R2 543
2 TraesCS1A01G308200 chr1A 517855496 517856035 539 True 846.00 846 94.8530 2687 3230 1 chr1A.!!$R3 543
3 TraesCS1A01G308200 chr1D 403939188 403940957 1769 True 1376.00 2447 92.7810 887 2628 2 chr1D.!!$R1 1741
4 TraesCS1A01G308200 chr1B 543428162 543429904 1742 True 1235.55 2398 95.8115 658 2269 2 chr1B.!!$R1 1611
5 TraesCS1A01G308200 chr4A 637247880 637248421 541 False 869.00 869 95.5880 2688 3230 1 chr4A.!!$F1 542
6 TraesCS1A01G308200 chr4A 29921791 29922330 539 True 856.00 856 95.2120 2688 3230 1 chr4A.!!$R2 542
7 TraesCS1A01G308200 chrUn 190392657 190393196 539 True 867.00 867 95.5800 2688 3230 1 chrUn.!!$R1 542
8 TraesCS1A01G308200 chrUn 292034770 292035305 535 False 850.00 850 95.1850 2688 3227 1 chrUn.!!$F2 539
9 TraesCS1A01G308200 chrUn 467818132 467818671 539 True 850.00 850 95.0280 2688 3230 1 chrUn.!!$R2 542
10 TraesCS1A01G308200 chrUn 183464804 183465342 538 False 845.00 845 94.8430 2688 3230 1 chrUn.!!$F1 542
11 TraesCS1A01G308200 chr2A 22754063 22754601 538 True 850.00 850 95.0280 2688 3230 1 chr2A.!!$R1 542
12 TraesCS1A01G308200 chr5A 485387809 485388322 513 True 344.00 344 79.3500 1043 1548 1 chr5A.!!$R1 505
13 TraesCS1A01G308200 chr5B 461304982 461305495 513 True 357.00 357 79.7300 1043 1544 1 chr5B.!!$R1 501
14 TraesCS1A01G308200 chr5B 461545421 461545929 508 True 348.00 348 79.4570 1041 1543 1 chr5B.!!$R3 502
15 TraesCS1A01G308200 chr5B 461491365 461491875 510 True 268.00 268 76.7310 1043 1548 1 chr5B.!!$R2 505
16 TraesCS1A01G308200 chr5D 384479849 384480365 516 True 357.00 357 79.6930 1043 1548 1 chr5D.!!$R1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
285 286 0.030369 GGTACGAGGCCTGACATACG 59.970 60.0 12.00 9.27 0.0 3.06 F
286 287 0.030369 GTACGAGGCCTGACATACGG 59.970 60.0 12.00 0.00 0.0 4.02 F
474 475 0.031917 TGGCAGTTATCGGGACCCTA 60.032 55.0 9.41 0.00 0.0 3.53 F
641 642 0.109086 TGTTGTTGTTGTTGCGGGTG 60.109 50.0 0.00 0.00 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1629 1682 1.078848 GACCAGCTTGCTCGTCCAT 60.079 57.895 8.79 0.0 0.0 3.41 R
2163 2216 2.264005 TTTTAAAGTGCCGGAGCTCA 57.736 45.000 17.19 0.0 40.8 4.26 R
2207 2260 3.737559 AATCATCCTTGCTGTTACCCA 57.262 42.857 0.00 0.0 0.0 4.51 R
2431 2640 4.200874 TCTTAACCAGAAAAGTTCCGCAA 58.799 39.130 0.00 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 3.238232 GCACATGGCAACTCTCTCA 57.762 52.632 0.00 0.00 43.97 3.27
32 33 1.527034 GCACATGGCAACTCTCTCAA 58.473 50.000 0.00 0.00 43.97 3.02
33 34 1.198637 GCACATGGCAACTCTCTCAAC 59.801 52.381 0.00 0.00 43.97 3.18
34 35 2.775890 CACATGGCAACTCTCTCAACT 58.224 47.619 0.00 0.00 37.61 3.16
35 36 2.483106 CACATGGCAACTCTCTCAACTG 59.517 50.000 0.00 0.00 37.61 3.16
36 37 1.467734 CATGGCAACTCTCTCAACTGC 59.532 52.381 0.00 0.00 37.61 4.40
37 38 2.549332 GGCAACTCTCTCAACTGCC 58.451 57.895 0.00 0.00 45.27 4.85
38 39 3.621953 GCAACTCTCTCAACTGCCT 57.378 52.632 0.00 0.00 0.00 4.75
39 40 2.751166 GCAACTCTCTCAACTGCCTA 57.249 50.000 0.00 0.00 0.00 3.93
40 41 2.615869 GCAACTCTCTCAACTGCCTAG 58.384 52.381 0.00 0.00 0.00 3.02
41 42 2.028567 GCAACTCTCTCAACTGCCTAGT 60.029 50.000 0.00 0.00 39.32 2.57
42 43 3.583806 CAACTCTCTCAACTGCCTAGTG 58.416 50.000 0.00 0.00 37.19 2.74
43 44 2.883026 ACTCTCTCAACTGCCTAGTGT 58.117 47.619 0.00 0.00 37.19 3.55
44 45 3.235200 ACTCTCTCAACTGCCTAGTGTT 58.765 45.455 0.00 0.00 37.19 3.32
45 46 4.408276 ACTCTCTCAACTGCCTAGTGTTA 58.592 43.478 0.00 0.00 37.19 2.41
46 47 4.461081 ACTCTCTCAACTGCCTAGTGTTAG 59.539 45.833 0.00 0.00 37.19 2.34
47 48 4.408276 TCTCTCAACTGCCTAGTGTTAGT 58.592 43.478 0.00 0.00 37.19 2.24
48 49 5.567430 TCTCTCAACTGCCTAGTGTTAGTA 58.433 41.667 0.00 0.00 37.19 1.82
49 50 6.188407 TCTCTCAACTGCCTAGTGTTAGTAT 58.812 40.000 0.00 0.00 37.19 2.12
50 51 6.095580 TCTCTCAACTGCCTAGTGTTAGTATG 59.904 42.308 0.00 0.00 37.19 2.39
51 52 5.715279 TCTCAACTGCCTAGTGTTAGTATGT 59.285 40.000 0.00 0.00 37.19 2.29
52 53 5.720202 TCAACTGCCTAGTGTTAGTATGTG 58.280 41.667 0.00 0.00 37.19 3.21
53 54 4.737855 ACTGCCTAGTGTTAGTATGTGG 57.262 45.455 0.00 0.00 35.34 4.17
54 55 3.118738 ACTGCCTAGTGTTAGTATGTGGC 60.119 47.826 0.00 0.00 35.34 5.01
55 56 2.835156 TGCCTAGTGTTAGTATGTGGCA 59.165 45.455 0.00 0.00 45.51 4.92
56 57 3.262151 TGCCTAGTGTTAGTATGTGGCAA 59.738 43.478 0.00 0.00 44.86 4.52
57 58 3.621715 GCCTAGTGTTAGTATGTGGCAAC 59.378 47.826 0.00 0.00 38.99 4.17
58 59 4.623171 GCCTAGTGTTAGTATGTGGCAACT 60.623 45.833 0.00 0.00 38.99 3.16
59 60 5.109903 CCTAGTGTTAGTATGTGGCAACTC 58.890 45.833 0.00 0.00 37.61 3.01
60 61 3.939066 AGTGTTAGTATGTGGCAACTCC 58.061 45.455 0.00 0.00 37.61 3.85
61 62 3.583086 AGTGTTAGTATGTGGCAACTCCT 59.417 43.478 0.00 0.00 35.26 3.69
62 63 4.775780 AGTGTTAGTATGTGGCAACTCCTA 59.224 41.667 0.00 0.00 35.26 2.94
63 64 5.247564 AGTGTTAGTATGTGGCAACTCCTAA 59.752 40.000 0.00 0.00 35.26 2.69
64 65 5.935789 GTGTTAGTATGTGGCAACTCCTAAA 59.064 40.000 0.00 0.00 35.26 1.85
65 66 6.092259 GTGTTAGTATGTGGCAACTCCTAAAG 59.908 42.308 0.00 0.00 35.26 1.85
66 67 4.910458 AGTATGTGGCAACTCCTAAAGT 57.090 40.909 0.00 0.00 41.10 2.66
68 69 6.368779 AGTATGTGGCAACTCCTAAAGTTA 57.631 37.500 0.00 0.00 46.69 2.24
69 70 6.958767 AGTATGTGGCAACTCCTAAAGTTAT 58.041 36.000 0.00 0.00 46.69 1.89
70 71 6.823689 AGTATGTGGCAACTCCTAAAGTTATG 59.176 38.462 0.00 0.00 46.69 1.90
71 72 5.235850 TGTGGCAACTCCTAAAGTTATGA 57.764 39.130 0.00 0.00 46.69 2.15
72 73 5.626142 TGTGGCAACTCCTAAAGTTATGAA 58.374 37.500 0.00 0.00 46.69 2.57
73 74 6.065374 TGTGGCAACTCCTAAAGTTATGAAA 58.935 36.000 0.00 0.00 46.69 2.69
74 75 6.719370 TGTGGCAACTCCTAAAGTTATGAAAT 59.281 34.615 0.00 0.00 46.69 2.17
75 76 7.094377 TGTGGCAACTCCTAAAGTTATGAAATC 60.094 37.037 0.00 0.00 46.69 2.17
76 77 6.945435 TGGCAACTCCTAAAGTTATGAAATCA 59.055 34.615 0.00 0.00 46.69 2.57
77 78 7.615365 TGGCAACTCCTAAAGTTATGAAATCAT 59.385 33.333 1.01 1.01 46.69 2.45
78 79 7.917505 GGCAACTCCTAAAGTTATGAAATCATG 59.082 37.037 6.17 0.00 46.69 3.07
79 80 7.917505 GCAACTCCTAAAGTTATGAAATCATGG 59.082 37.037 6.17 0.00 46.69 3.66
80 81 7.573968 ACTCCTAAAGTTATGAAATCATGGC 57.426 36.000 6.17 0.00 37.15 4.40
81 82 7.118723 ACTCCTAAAGTTATGAAATCATGGCA 58.881 34.615 6.17 0.00 37.15 4.92
82 83 7.615365 ACTCCTAAAGTTATGAAATCATGGCAA 59.385 33.333 6.17 0.00 37.15 4.52
83 84 7.771183 TCCTAAAGTTATGAAATCATGGCAAC 58.229 34.615 6.17 3.32 37.15 4.17
84 85 7.615365 TCCTAAAGTTATGAAATCATGGCAACT 59.385 33.333 6.17 5.41 35.40 3.16
85 86 8.902806 CCTAAAGTTATGAAATCATGGCAACTA 58.097 33.333 6.17 0.00 33.78 2.24
86 87 9.722056 CTAAAGTTATGAAATCATGGCAACTAC 57.278 33.333 6.17 0.00 33.78 2.73
87 88 7.701539 AAGTTATGAAATCATGGCAACTACA 57.298 32.000 6.17 0.00 33.78 2.74
88 89 7.886629 AGTTATGAAATCATGGCAACTACAT 57.113 32.000 6.17 0.00 33.39 2.29
89 90 8.297470 AGTTATGAAATCATGGCAACTACATT 57.703 30.769 6.17 0.00 33.39 2.71
90 91 9.407380 AGTTATGAAATCATGGCAACTACATTA 57.593 29.630 6.17 0.00 33.39 1.90
91 92 9.669353 GTTATGAAATCATGGCAACTACATTAG 57.331 33.333 6.17 0.00 37.15 1.73
92 93 9.625747 TTATGAAATCATGGCAACTACATTAGA 57.374 29.630 6.17 0.00 37.15 2.10
93 94 8.701908 ATGAAATCATGGCAACTACATTAGAT 57.298 30.769 0.00 0.00 34.83 1.98
94 95 8.158169 TGAAATCATGGCAACTACATTAGATC 57.842 34.615 0.00 0.00 37.61 2.75
95 96 7.774625 TGAAATCATGGCAACTACATTAGATCA 59.225 33.333 0.00 0.00 37.61 2.92
96 97 7.741027 AATCATGGCAACTACATTAGATCAG 57.259 36.000 0.00 0.00 37.61 2.90
97 98 6.484364 TCATGGCAACTACATTAGATCAGA 57.516 37.500 0.00 0.00 37.61 3.27
98 99 6.283694 TCATGGCAACTACATTAGATCAGAC 58.716 40.000 0.00 0.00 37.61 3.51
99 100 5.939764 TGGCAACTACATTAGATCAGACT 57.060 39.130 0.00 0.00 37.61 3.24
100 101 7.287696 TCATGGCAACTACATTAGATCAGACTA 59.712 37.037 0.00 0.00 37.61 2.59
101 102 7.603180 TGGCAACTACATTAGATCAGACTAT 57.397 36.000 0.00 0.00 37.61 2.12
102 103 8.706322 TGGCAACTACATTAGATCAGACTATA 57.294 34.615 0.00 0.00 37.61 1.31
103 104 8.577296 TGGCAACTACATTAGATCAGACTATAC 58.423 37.037 0.00 0.00 37.61 1.47
104 105 8.577296 GGCAACTACATTAGATCAGACTATACA 58.423 37.037 0.00 0.00 0.00 2.29
108 109 8.744652 ACTACATTAGATCAGACTATACATGGC 58.255 37.037 0.00 0.00 0.00 4.40
109 110 7.544804 ACATTAGATCAGACTATACATGGCA 57.455 36.000 0.00 0.00 0.00 4.92
110 111 7.966812 ACATTAGATCAGACTATACATGGCAA 58.033 34.615 0.00 0.00 0.00 4.52
111 112 8.600668 ACATTAGATCAGACTATACATGGCAAT 58.399 33.333 0.00 0.00 0.00 3.56
112 113 9.445878 CATTAGATCAGACTATACATGGCAATT 57.554 33.333 0.00 0.00 0.00 2.32
113 114 8.837788 TTAGATCAGACTATACATGGCAATTG 57.162 34.615 0.00 0.00 0.00 2.32
114 115 5.704515 AGATCAGACTATACATGGCAATTGC 59.295 40.000 22.47 22.47 41.14 3.56
115 116 4.779696 TCAGACTATACATGGCAATTGCA 58.220 39.130 30.32 17.35 44.36 4.08
116 117 4.818005 TCAGACTATACATGGCAATTGCAG 59.182 41.667 30.32 21.03 44.36 4.41
117 118 4.577693 CAGACTATACATGGCAATTGCAGT 59.422 41.667 30.32 24.95 44.36 4.40
118 119 5.066893 CAGACTATACATGGCAATTGCAGTT 59.933 40.000 30.32 14.30 44.36 3.16
119 120 5.066893 AGACTATACATGGCAATTGCAGTTG 59.933 40.000 30.32 23.88 44.36 3.16
120 121 4.949238 ACTATACATGGCAATTGCAGTTGA 59.051 37.500 30.32 13.56 44.36 3.18
121 122 2.736144 ACATGGCAATTGCAGTTGAG 57.264 45.000 30.32 15.79 44.36 3.02
122 123 1.337447 ACATGGCAATTGCAGTTGAGC 60.337 47.619 30.32 12.61 44.36 4.26
123 124 0.970640 ATGGCAATTGCAGTTGAGCA 59.029 45.000 30.32 17.68 44.36 4.26
130 131 2.343506 TGCAGTTGAGCAACCATGG 58.656 52.632 11.19 11.19 42.46 3.66
131 132 1.080298 GCAGTTGAGCAACCATGGC 60.080 57.895 13.04 0.00 42.06 4.40
132 133 1.808531 GCAGTTGAGCAACCATGGCA 61.809 55.000 13.04 0.00 42.06 4.92
133 134 0.675083 CAGTTGAGCAACCATGGCAA 59.325 50.000 13.04 4.49 42.06 4.52
134 135 0.675633 AGTTGAGCAACCATGGCAAC 59.324 50.000 19.02 19.02 42.06 4.17
135 136 0.675633 GTTGAGCAACCATGGCAACT 59.324 50.000 19.25 11.63 36.73 3.16
136 137 0.675083 TTGAGCAACCATGGCAACTG 59.325 50.000 13.04 5.49 37.61 3.16
137 138 1.080298 GAGCAACCATGGCAACTGC 60.080 57.895 13.04 15.46 41.14 4.40
138 139 1.808531 GAGCAACCATGGCAACTGCA 61.809 55.000 23.11 0.00 44.36 4.41
139 140 1.373748 GCAACCATGGCAACTGCAG 60.374 57.895 13.04 13.48 44.36 4.41
140 141 2.043625 CAACCATGGCAACTGCAGT 58.956 52.632 15.25 15.25 44.36 4.40
141 142 0.390124 CAACCATGGCAACTGCAGTT 59.610 50.000 26.36 26.36 44.36 3.16
150 151 3.706055 AACTGCAGTTGTCCGACAT 57.294 47.368 30.66 3.41 36.80 3.06
151 152 1.229428 AACTGCAGTTGTCCGACATG 58.771 50.000 30.66 0.00 36.80 3.21
152 153 0.603707 ACTGCAGTTGTCCGACATGG 60.604 55.000 15.25 0.00 40.09 3.66
153 154 1.915614 CTGCAGTTGTCCGACATGGC 61.916 60.000 5.25 7.26 37.80 4.40
154 155 1.965930 GCAGTTGTCCGACATGGCA 60.966 57.895 1.09 0.00 37.80 4.92
155 156 1.514678 GCAGTTGTCCGACATGGCAA 61.515 55.000 1.09 0.00 37.80 4.52
156 157 1.167851 CAGTTGTCCGACATGGCAAT 58.832 50.000 1.09 0.00 36.56 3.56
157 158 1.131126 CAGTTGTCCGACATGGCAATC 59.869 52.381 1.09 0.00 36.56 2.67
158 159 0.096976 GTTGTCCGACATGGCAATCG 59.903 55.000 15.37 15.37 36.56 3.34
159 160 0.321210 TTGTCCGACATGGCAATCGT 60.321 50.000 19.24 5.65 36.60 3.73
160 161 0.533032 TGTCCGACATGGCAATCGTA 59.467 50.000 19.24 5.00 36.60 3.43
161 162 1.209128 GTCCGACATGGCAATCGTAG 58.791 55.000 19.24 8.47 36.60 3.51
162 163 0.821517 TCCGACATGGCAATCGTAGT 59.178 50.000 19.24 0.79 36.60 2.73
163 164 1.206132 TCCGACATGGCAATCGTAGTT 59.794 47.619 19.24 0.00 36.60 2.24
164 165 1.593006 CCGACATGGCAATCGTAGTTC 59.407 52.381 19.24 0.00 36.60 3.01
165 166 2.267426 CGACATGGCAATCGTAGTTCA 58.733 47.619 14.39 0.00 33.63 3.18
166 167 2.282555 CGACATGGCAATCGTAGTTCAG 59.717 50.000 14.39 0.00 33.63 3.02
167 168 2.009774 ACATGGCAATCGTAGTTCAGC 58.990 47.619 0.00 0.00 0.00 4.26
168 169 1.004610 CATGGCAATCGTAGTTCAGCG 60.005 52.381 0.00 0.00 0.00 5.18
169 170 0.245266 TGGCAATCGTAGTTCAGCGA 59.755 50.000 0.00 0.00 41.50 4.93
170 171 0.645868 GGCAATCGTAGTTCAGCGAC 59.354 55.000 0.00 0.00 40.03 5.19
171 172 1.346365 GCAATCGTAGTTCAGCGACA 58.654 50.000 0.00 0.00 40.03 4.35
172 173 1.927174 GCAATCGTAGTTCAGCGACAT 59.073 47.619 0.00 0.00 40.03 3.06
173 174 2.285256 GCAATCGTAGTTCAGCGACATG 60.285 50.000 0.00 0.00 40.03 3.21
174 175 2.209838 ATCGTAGTTCAGCGACATGG 57.790 50.000 0.00 0.00 40.03 3.66
175 176 0.457853 TCGTAGTTCAGCGACATGGC 60.458 55.000 0.00 0.00 31.76 4.40
176 177 0.735978 CGTAGTTCAGCGACATGGCA 60.736 55.000 0.00 0.00 34.64 4.92
177 178 1.438651 GTAGTTCAGCGACATGGCAA 58.561 50.000 0.00 0.00 34.64 4.52
178 179 1.128692 GTAGTTCAGCGACATGGCAAC 59.871 52.381 0.00 0.00 34.64 4.17
179 180 0.250467 AGTTCAGCGACATGGCAACT 60.250 50.000 0.00 0.00 34.64 3.16
180 181 0.110056 GTTCAGCGACATGGCAACTG 60.110 55.000 11.56 11.56 34.64 3.16
181 182 1.855213 TTCAGCGACATGGCAACTGC 61.855 55.000 12.73 0.88 41.14 4.40
182 183 2.281692 AGCGACATGGCAACTGCA 60.282 55.556 0.00 0.00 44.36 4.41
183 184 2.177531 GCGACATGGCAACTGCAG 59.822 61.111 13.48 13.48 44.36 4.41
184 185 2.327343 GCGACATGGCAACTGCAGA 61.327 57.895 23.35 0.00 44.36 4.26
185 186 1.651240 GCGACATGGCAACTGCAGAT 61.651 55.000 23.35 5.41 44.36 2.90
186 187 1.655484 CGACATGGCAACTGCAGATA 58.345 50.000 23.35 1.53 44.36 1.98
187 188 2.009051 CGACATGGCAACTGCAGATAA 58.991 47.619 23.35 1.00 44.36 1.75
188 189 2.419673 CGACATGGCAACTGCAGATAAA 59.580 45.455 23.35 1.79 44.36 1.40
189 190 3.728864 CGACATGGCAACTGCAGATAAAC 60.729 47.826 23.35 6.97 44.36 2.01
190 191 2.162208 ACATGGCAACTGCAGATAAACG 59.838 45.455 23.35 5.46 44.36 3.60
191 192 2.177394 TGGCAACTGCAGATAAACGA 57.823 45.000 23.35 0.00 44.36 3.85
192 193 2.499197 TGGCAACTGCAGATAAACGAA 58.501 42.857 23.35 0.00 44.36 3.85
193 194 2.225491 TGGCAACTGCAGATAAACGAAC 59.775 45.455 23.35 1.07 44.36 3.95
194 195 2.225491 GGCAACTGCAGATAAACGAACA 59.775 45.455 23.35 0.00 44.36 3.18
195 196 3.119849 GGCAACTGCAGATAAACGAACAT 60.120 43.478 23.35 0.00 44.36 2.71
196 197 3.848019 GCAACTGCAGATAAACGAACATG 59.152 43.478 23.35 0.00 41.59 3.21
197 198 4.406069 CAACTGCAGATAAACGAACATGG 58.594 43.478 23.35 0.00 0.00 3.66
198 199 3.937814 ACTGCAGATAAACGAACATGGA 58.062 40.909 23.35 0.00 0.00 3.41
199 200 3.684788 ACTGCAGATAAACGAACATGGAC 59.315 43.478 23.35 0.00 0.00 4.02
200 201 2.670905 TGCAGATAAACGAACATGGACG 59.329 45.455 11.17 11.17 0.00 4.79
201 202 2.927477 GCAGATAAACGAACATGGACGA 59.073 45.455 17.79 0.00 0.00 4.20
202 203 3.000322 GCAGATAAACGAACATGGACGAG 60.000 47.826 17.79 0.00 0.00 4.18
203 204 3.551890 CAGATAAACGAACATGGACGAGG 59.448 47.826 17.79 0.00 0.00 4.63
204 205 2.373540 TAAACGAACATGGACGAGGG 57.626 50.000 17.79 0.00 0.00 4.30
205 206 0.395312 AAACGAACATGGACGAGGGT 59.605 50.000 17.79 0.00 0.00 4.34
206 207 0.037605 AACGAACATGGACGAGGGTC 60.038 55.000 17.79 0.00 42.66 4.46
207 208 0.898789 ACGAACATGGACGAGGGTCT 60.899 55.000 17.79 0.00 42.97 3.85
208 209 0.458543 CGAACATGGACGAGGGTCTG 60.459 60.000 7.81 0.00 42.97 3.51
209 210 0.108138 GAACATGGACGAGGGTCTGG 60.108 60.000 0.00 0.00 42.97 3.86
210 211 0.544357 AACATGGACGAGGGTCTGGA 60.544 55.000 0.00 0.00 42.97 3.86
211 212 1.258445 ACATGGACGAGGGTCTGGAC 61.258 60.000 0.00 0.00 42.97 4.02
222 223 2.559785 GTCTGGACCATGGCAACTG 58.440 57.895 13.04 6.56 37.61 3.16
223 224 1.303561 TCTGGACCATGGCAACTGC 60.304 57.895 13.04 0.00 41.14 4.40
224 225 2.672651 TGGACCATGGCAACTGCG 60.673 61.111 13.04 0.00 43.26 5.18
225 226 2.359850 GGACCATGGCAACTGCGA 60.360 61.111 13.04 0.00 43.26 5.10
226 227 2.401766 GGACCATGGCAACTGCGAG 61.402 63.158 13.04 0.00 43.26 5.03
227 228 3.044059 GACCATGGCAACTGCGAGC 62.044 63.158 13.04 0.00 43.26 5.03
228 229 4.170062 CCATGGCAACTGCGAGCG 62.170 66.667 0.00 0.00 43.26 5.03
229 230 4.824166 CATGGCAACTGCGAGCGC 62.824 66.667 8.08 8.08 43.26 5.92
267 268 4.760047 CGTGCGGGACCAGAAGGG 62.760 72.222 0.00 0.00 44.81 3.95
276 277 2.901042 CCAGAAGGGTACGAGGCC 59.099 66.667 0.00 0.00 0.00 5.19
277 278 1.686110 CCAGAAGGGTACGAGGCCT 60.686 63.158 3.86 3.86 0.00 5.19
278 279 1.517832 CAGAAGGGTACGAGGCCTG 59.482 63.158 12.00 5.11 0.00 4.85
279 280 0.970937 CAGAAGGGTACGAGGCCTGA 60.971 60.000 12.00 0.00 0.00 3.86
280 281 0.971447 AGAAGGGTACGAGGCCTGAC 60.971 60.000 12.00 5.04 0.00 3.51
281 282 1.229082 AAGGGTACGAGGCCTGACA 60.229 57.895 12.00 0.00 0.00 3.58
282 283 0.617820 AAGGGTACGAGGCCTGACAT 60.618 55.000 12.00 0.00 0.00 3.06
283 284 0.260816 AGGGTACGAGGCCTGACATA 59.739 55.000 12.00 0.00 0.00 2.29
284 285 0.388294 GGGTACGAGGCCTGACATAC 59.612 60.000 12.00 6.88 0.00 2.39
285 286 0.030369 GGTACGAGGCCTGACATACG 59.970 60.000 12.00 9.27 0.00 3.06
286 287 0.030369 GTACGAGGCCTGACATACGG 59.970 60.000 12.00 0.00 0.00 4.02
292 293 2.577059 CCTGACATACGGGCGTGT 59.423 61.111 0.00 0.00 38.29 4.49
293 294 1.809619 CCTGACATACGGGCGTGTG 60.810 63.158 0.00 0.00 41.90 3.82
294 295 1.809619 CTGACATACGGGCGTGTGG 60.810 63.158 0.00 0.00 40.75 4.17
295 296 2.510691 GACATACGGGCGTGTGGG 60.511 66.667 0.00 0.00 40.75 4.61
296 297 4.770874 ACATACGGGCGTGTGGGC 62.771 66.667 0.00 0.00 40.75 5.36
302 303 3.199891 GGGCGTGTGGGCGTTATC 61.200 66.667 0.00 0.00 43.46 1.75
303 304 2.435234 GGCGTGTGGGCGTTATCA 60.435 61.111 0.00 0.00 0.00 2.15
304 305 2.036006 GGCGTGTGGGCGTTATCAA 61.036 57.895 0.00 0.00 0.00 2.57
305 306 1.133869 GCGTGTGGGCGTTATCAAC 59.866 57.895 0.00 0.00 0.00 3.18
306 307 1.296056 GCGTGTGGGCGTTATCAACT 61.296 55.000 0.00 0.00 0.00 3.16
307 308 1.153353 CGTGTGGGCGTTATCAACTT 58.847 50.000 0.00 0.00 0.00 2.66
308 309 1.127951 CGTGTGGGCGTTATCAACTTC 59.872 52.381 0.00 0.00 0.00 3.01
309 310 1.127951 GTGTGGGCGTTATCAACTTCG 59.872 52.381 0.00 0.00 0.00 3.79
310 311 0.725117 GTGGGCGTTATCAACTTCGG 59.275 55.000 0.00 0.00 0.00 4.30
311 312 1.022451 TGGGCGTTATCAACTTCGGC 61.022 55.000 0.00 0.00 45.47 5.54
312 313 1.719709 GGCGTTATCAACTTCGGCC 59.280 57.895 0.00 0.00 41.64 6.13
313 314 1.022451 GGCGTTATCAACTTCGGCCA 61.022 55.000 2.24 0.00 41.64 5.36
314 315 0.096454 GCGTTATCAACTTCGGCCAC 59.904 55.000 2.24 0.00 0.00 5.01
315 316 1.434555 CGTTATCAACTTCGGCCACA 58.565 50.000 2.24 0.00 0.00 4.17
316 317 1.127951 CGTTATCAACTTCGGCCACAC 59.872 52.381 2.24 0.00 0.00 3.82
317 318 1.127951 GTTATCAACTTCGGCCACACG 59.872 52.381 2.24 0.00 0.00 4.49
318 319 1.017177 TATCAACTTCGGCCACACGC 61.017 55.000 2.24 0.00 0.00 5.34
319 320 3.276091 CAACTTCGGCCACACGCA 61.276 61.111 2.24 0.00 40.31 5.24
320 321 3.276846 AACTTCGGCCACACGCAC 61.277 61.111 2.24 0.00 40.31 5.34
336 337 2.338984 ACGCGTGTGAGAGGGTTC 59.661 61.111 12.93 0.00 0.00 3.62
337 338 2.338620 CGCGTGTGAGAGGGTTCA 59.661 61.111 0.00 0.00 0.00 3.18
338 339 1.734477 CGCGTGTGAGAGGGTTCAG 60.734 63.158 0.00 0.00 0.00 3.02
339 340 1.374758 GCGTGTGAGAGGGTTCAGG 60.375 63.158 0.00 0.00 0.00 3.86
340 341 1.816863 GCGTGTGAGAGGGTTCAGGA 61.817 60.000 0.00 0.00 0.00 3.86
341 342 0.244994 CGTGTGAGAGGGTTCAGGAG 59.755 60.000 0.00 0.00 0.00 3.69
342 343 0.610687 GTGTGAGAGGGTTCAGGAGG 59.389 60.000 0.00 0.00 0.00 4.30
343 344 0.545309 TGTGAGAGGGTTCAGGAGGG 60.545 60.000 0.00 0.00 0.00 4.30
344 345 0.252284 GTGAGAGGGTTCAGGAGGGA 60.252 60.000 0.00 0.00 0.00 4.20
345 346 0.491823 TGAGAGGGTTCAGGAGGGAA 59.508 55.000 0.00 0.00 0.00 3.97
346 347 1.132527 TGAGAGGGTTCAGGAGGGAAA 60.133 52.381 0.00 0.00 0.00 3.13
347 348 1.985895 GAGAGGGTTCAGGAGGGAAAA 59.014 52.381 0.00 0.00 0.00 2.29
348 349 2.375509 GAGAGGGTTCAGGAGGGAAAAA 59.624 50.000 0.00 0.00 0.00 1.94
367 368 4.789012 AAAAGATGTGTGTGGGCATTAG 57.211 40.909 0.00 0.00 0.00 1.73
368 369 3.439857 AAGATGTGTGTGGGCATTAGT 57.560 42.857 0.00 0.00 0.00 2.24
369 370 3.439857 AGATGTGTGTGGGCATTAGTT 57.560 42.857 0.00 0.00 0.00 2.24
370 371 3.084039 AGATGTGTGTGGGCATTAGTTG 58.916 45.455 0.00 0.00 0.00 3.16
371 372 2.356665 TGTGTGTGGGCATTAGTTGT 57.643 45.000 0.00 0.00 0.00 3.32
372 373 2.660572 TGTGTGTGGGCATTAGTTGTT 58.339 42.857 0.00 0.00 0.00 2.83
373 374 3.027412 TGTGTGTGGGCATTAGTTGTTT 58.973 40.909 0.00 0.00 0.00 2.83
374 375 3.449018 TGTGTGTGGGCATTAGTTGTTTT 59.551 39.130 0.00 0.00 0.00 2.43
375 376 3.801594 GTGTGTGGGCATTAGTTGTTTTG 59.198 43.478 0.00 0.00 0.00 2.44
376 377 2.799978 GTGTGGGCATTAGTTGTTTTGC 59.200 45.455 0.00 0.00 0.00 3.68
381 382 3.104843 GCATTAGTTGTTTTGCCCACA 57.895 42.857 0.00 0.00 0.00 4.17
382 383 2.799978 GCATTAGTTGTTTTGCCCACAC 59.200 45.455 0.00 0.00 0.00 3.82
383 384 2.853731 TTAGTTGTTTTGCCCACACG 57.146 45.000 0.00 0.00 0.00 4.49
384 385 1.752683 TAGTTGTTTTGCCCACACGT 58.247 45.000 0.00 0.00 0.00 4.49
385 386 1.752683 AGTTGTTTTGCCCACACGTA 58.247 45.000 0.00 0.00 0.00 3.57
386 387 1.673920 AGTTGTTTTGCCCACACGTAG 59.326 47.619 0.00 0.00 0.00 3.51
387 388 1.025812 TTGTTTTGCCCACACGTAGG 58.974 50.000 0.00 0.00 0.00 3.18
388 389 0.107116 TGTTTTGCCCACACGTAGGT 60.107 50.000 5.59 0.00 0.00 3.08
397 398 2.741092 CACGTAGGTGTGTGGGCT 59.259 61.111 7.41 0.00 39.38 5.19
398 399 1.667830 CACGTAGGTGTGTGGGCTG 60.668 63.158 7.41 0.00 39.38 4.85
399 400 2.047274 CGTAGGTGTGTGGGCTGG 60.047 66.667 0.00 0.00 0.00 4.85
400 401 2.879233 CGTAGGTGTGTGGGCTGGT 61.879 63.158 0.00 0.00 0.00 4.00
401 402 1.454539 GTAGGTGTGTGGGCTGGTT 59.545 57.895 0.00 0.00 0.00 3.67
402 403 0.889186 GTAGGTGTGTGGGCTGGTTG 60.889 60.000 0.00 0.00 0.00 3.77
403 404 2.690653 TAGGTGTGTGGGCTGGTTGC 62.691 60.000 0.00 0.00 41.94 4.17
404 405 2.519302 GTGTGTGGGCTGGTTGCT 60.519 61.111 0.00 0.00 42.39 3.91
405 406 2.519063 TGTGTGGGCTGGTTGCTG 60.519 61.111 0.00 0.00 42.39 4.41
406 407 2.519302 GTGTGGGCTGGTTGCTGT 60.519 61.111 0.00 0.00 42.39 4.40
407 408 2.203337 TGTGGGCTGGTTGCTGTC 60.203 61.111 0.00 0.00 42.39 3.51
408 409 2.985847 GTGGGCTGGTTGCTGTCC 60.986 66.667 0.00 0.00 42.39 4.02
409 410 3.497115 TGGGCTGGTTGCTGTCCA 61.497 61.111 0.00 0.00 42.39 4.02
410 411 2.036256 GGGCTGGTTGCTGTCCAT 59.964 61.111 0.00 0.00 42.39 3.41
411 412 2.345760 GGGCTGGTTGCTGTCCATG 61.346 63.158 0.00 0.00 42.39 3.66
412 413 1.604593 GGCTGGTTGCTGTCCATGT 60.605 57.895 0.00 0.00 42.39 3.21
413 414 1.589716 GGCTGGTTGCTGTCCATGTC 61.590 60.000 0.00 0.00 42.39 3.06
414 415 0.890542 GCTGGTTGCTGTCCATGTCA 60.891 55.000 0.00 0.00 38.95 3.58
415 416 0.877071 CTGGTTGCTGTCCATGTCAC 59.123 55.000 0.00 0.00 34.26 3.67
416 417 0.182299 TGGTTGCTGTCCATGTCACA 59.818 50.000 0.00 0.00 0.00 3.58
417 418 0.593128 GGTTGCTGTCCATGTCACAC 59.407 55.000 0.00 0.00 0.00 3.82
418 419 0.235665 GTTGCTGTCCATGTCACACG 59.764 55.000 0.00 0.00 0.00 4.49
419 420 0.105778 TTGCTGTCCATGTCACACGA 59.894 50.000 0.00 0.00 0.00 4.35
420 421 0.319813 TGCTGTCCATGTCACACGAG 60.320 55.000 0.00 0.00 0.00 4.18
421 422 1.016130 GCTGTCCATGTCACACGAGG 61.016 60.000 0.00 0.00 0.00 4.63
422 423 0.603065 CTGTCCATGTCACACGAGGA 59.397 55.000 0.00 0.00 0.00 3.71
423 424 0.603065 TGTCCATGTCACACGAGGAG 59.397 55.000 0.00 0.00 0.00 3.69
424 425 0.603569 GTCCATGTCACACGAGGAGT 59.396 55.000 0.00 0.00 0.00 3.85
432 433 2.421314 CACGAGGAGTGTGGCACA 59.579 61.111 17.96 17.96 45.51 4.57
433 434 1.227527 CACGAGGAGTGTGGCACAA 60.228 57.895 23.90 3.54 44.16 3.33
434 435 1.227556 ACGAGGAGTGTGGCACAAC 60.228 57.895 23.90 18.46 44.16 3.32
435 436 1.069765 CGAGGAGTGTGGCACAACT 59.930 57.895 23.90 20.54 44.16 3.16
436 437 0.317160 CGAGGAGTGTGGCACAACTA 59.683 55.000 23.90 0.00 44.16 2.24
437 438 1.797025 GAGGAGTGTGGCACAACTAC 58.203 55.000 23.90 20.74 44.16 2.73
438 439 0.396811 AGGAGTGTGGCACAACTACC 59.603 55.000 23.90 20.75 44.16 3.18
439 440 0.605589 GGAGTGTGGCACAACTACCC 60.606 60.000 23.90 15.03 44.16 3.69
440 441 0.949105 GAGTGTGGCACAACTACCCG 60.949 60.000 23.90 0.00 44.16 5.28
441 442 1.070105 GTGTGGCACAACTACCCGA 59.930 57.895 23.90 0.00 44.16 5.14
442 443 0.321298 GTGTGGCACAACTACCCGAT 60.321 55.000 23.90 0.00 44.16 4.18
443 444 1.066716 GTGTGGCACAACTACCCGATA 60.067 52.381 23.90 0.00 44.16 2.92
444 445 1.066716 TGTGGCACAACTACCCGATAC 60.067 52.381 19.74 0.00 44.16 2.24
445 446 1.066716 GTGGCACAACTACCCGATACA 60.067 52.381 13.86 0.00 44.16 2.29
446 447 1.066716 TGGCACAACTACCCGATACAC 60.067 52.381 0.00 0.00 31.92 2.90
447 448 1.648504 GCACAACTACCCGATACACC 58.351 55.000 0.00 0.00 0.00 4.16
448 449 1.066716 GCACAACTACCCGATACACCA 60.067 52.381 0.00 0.00 0.00 4.17
449 450 2.613691 CACAACTACCCGATACACCAC 58.386 52.381 0.00 0.00 0.00 4.16
450 451 2.028839 CACAACTACCCGATACACCACA 60.029 50.000 0.00 0.00 0.00 4.17
451 452 2.028748 ACAACTACCCGATACACCACAC 60.029 50.000 0.00 0.00 0.00 3.82
452 453 0.813184 ACTACCCGATACACCACACG 59.187 55.000 0.00 0.00 0.00 4.49
453 454 0.813184 CTACCCGATACACCACACGT 59.187 55.000 0.00 0.00 0.00 4.49
466 467 0.438445 CACACGTGTGGCAGTTATCG 59.562 55.000 35.65 10.61 42.10 2.92
467 468 0.669318 ACACGTGTGGCAGTTATCGG 60.669 55.000 22.71 0.00 34.19 4.18
468 469 1.079405 ACGTGTGGCAGTTATCGGG 60.079 57.895 0.00 0.00 0.00 5.14
469 470 1.216977 CGTGTGGCAGTTATCGGGA 59.783 57.895 0.00 0.00 0.00 5.14
470 471 1.082117 CGTGTGGCAGTTATCGGGAC 61.082 60.000 0.00 0.00 0.00 4.46
471 472 0.743345 GTGTGGCAGTTATCGGGACC 60.743 60.000 0.00 0.00 0.00 4.46
472 473 1.153229 GTGGCAGTTATCGGGACCC 60.153 63.158 0.00 0.00 0.00 4.46
473 474 1.306654 TGGCAGTTATCGGGACCCT 60.307 57.895 9.41 0.00 0.00 4.34
474 475 0.031917 TGGCAGTTATCGGGACCCTA 60.032 55.000 9.41 0.00 0.00 3.53
475 476 1.125633 GGCAGTTATCGGGACCCTAA 58.874 55.000 9.41 0.00 0.00 2.69
476 477 1.487558 GGCAGTTATCGGGACCCTAAA 59.512 52.381 9.41 0.00 0.00 1.85
477 478 2.092807 GGCAGTTATCGGGACCCTAAAA 60.093 50.000 9.41 0.00 0.00 1.52
478 479 3.613030 GCAGTTATCGGGACCCTAAAAA 58.387 45.455 9.41 0.00 0.00 1.94
503 504 9.855021 AAAATATTTACTCCCTTCGATTTGTTG 57.145 29.630 0.01 0.00 0.00 3.33
504 505 4.759516 TTTACTCCCTTCGATTTGTTGC 57.240 40.909 0.00 0.00 0.00 4.17
505 506 2.568623 ACTCCCTTCGATTTGTTGCT 57.431 45.000 0.00 0.00 0.00 3.91
506 507 2.154462 ACTCCCTTCGATTTGTTGCTG 58.846 47.619 0.00 0.00 0.00 4.41
507 508 2.224523 ACTCCCTTCGATTTGTTGCTGA 60.225 45.455 0.00 0.00 0.00 4.26
508 509 2.151202 TCCCTTCGATTTGTTGCTGAC 58.849 47.619 0.00 0.00 0.00 3.51
509 510 2.154462 CCCTTCGATTTGTTGCTGACT 58.846 47.619 0.00 0.00 0.00 3.41
510 511 2.554032 CCCTTCGATTTGTTGCTGACTT 59.446 45.455 0.00 0.00 0.00 3.01
511 512 3.751175 CCCTTCGATTTGTTGCTGACTTA 59.249 43.478 0.00 0.00 0.00 2.24
512 513 4.142816 CCCTTCGATTTGTTGCTGACTTAG 60.143 45.833 0.00 0.00 0.00 2.18
513 514 4.452455 CCTTCGATTTGTTGCTGACTTAGT 59.548 41.667 0.00 0.00 0.00 2.24
514 515 5.637810 CCTTCGATTTGTTGCTGACTTAGTA 59.362 40.000 0.00 0.00 0.00 1.82
515 516 6.401153 CCTTCGATTTGTTGCTGACTTAGTAC 60.401 42.308 0.00 0.00 0.00 2.73
516 517 5.534407 TCGATTTGTTGCTGACTTAGTACA 58.466 37.500 0.00 0.00 0.00 2.90
517 518 5.986741 TCGATTTGTTGCTGACTTAGTACAA 59.013 36.000 0.00 0.00 33.94 2.41
518 519 6.649141 TCGATTTGTTGCTGACTTAGTACAAT 59.351 34.615 0.00 0.00 34.97 2.71
519 520 7.172532 TCGATTTGTTGCTGACTTAGTACAATT 59.827 33.333 0.00 0.00 34.97 2.32
520 521 8.440059 CGATTTGTTGCTGACTTAGTACAATTA 58.560 33.333 0.00 0.00 34.97 1.40
549 550 8.652810 TGGATAAAAGCGAGTATTAGTTTACC 57.347 34.615 0.00 0.00 0.00 2.85
550 551 8.259411 TGGATAAAAGCGAGTATTAGTTTACCA 58.741 33.333 0.00 0.00 0.00 3.25
551 552 8.546244 GGATAAAAGCGAGTATTAGTTTACCAC 58.454 37.037 0.00 0.00 0.00 4.16
552 553 9.090692 GATAAAAGCGAGTATTAGTTTACCACA 57.909 33.333 0.00 0.00 0.00 4.17
553 554 7.733402 AAAAGCGAGTATTAGTTTACCACAA 57.267 32.000 0.00 0.00 0.00 3.33
554 555 6.963049 AAGCGAGTATTAGTTTACCACAAG 57.037 37.500 0.00 0.00 0.00 3.16
555 556 6.276832 AGCGAGTATTAGTTTACCACAAGA 57.723 37.500 0.00 0.00 0.00 3.02
556 557 6.694447 AGCGAGTATTAGTTTACCACAAGAA 58.306 36.000 0.00 0.00 0.00 2.52
557 558 7.328737 AGCGAGTATTAGTTTACCACAAGAAT 58.671 34.615 0.00 0.00 0.00 2.40
558 559 7.277981 AGCGAGTATTAGTTTACCACAAGAATG 59.722 37.037 0.00 0.00 0.00 2.67
559 560 7.399523 CGAGTATTAGTTTACCACAAGAATGC 58.600 38.462 0.00 0.00 0.00 3.56
560 561 7.064134 CGAGTATTAGTTTACCACAAGAATGCA 59.936 37.037 0.00 0.00 0.00 3.96
561 562 8.630054 AGTATTAGTTTACCACAAGAATGCAA 57.370 30.769 0.00 0.00 0.00 4.08
562 563 9.243105 AGTATTAGTTTACCACAAGAATGCAAT 57.757 29.630 0.00 0.00 0.00 3.56
563 564 9.289303 GTATTAGTTTACCACAAGAATGCAATG 57.711 33.333 0.00 0.00 0.00 2.82
564 565 7.517614 TTAGTTTACCACAAGAATGCAATGA 57.482 32.000 0.00 0.00 0.00 2.57
565 566 6.017400 AGTTTACCACAAGAATGCAATGAG 57.983 37.500 0.00 0.00 0.00 2.90
566 567 5.536161 AGTTTACCACAAGAATGCAATGAGT 59.464 36.000 0.00 0.00 0.00 3.41
567 568 6.040842 AGTTTACCACAAGAATGCAATGAGTT 59.959 34.615 0.00 0.00 0.00 3.01
568 569 4.247267 ACCACAAGAATGCAATGAGTTG 57.753 40.909 0.00 0.00 38.39 3.16
580 581 2.572191 ATGAGTTGCATTTGATGGCG 57.428 45.000 0.00 0.00 31.73 5.69
581 582 1.532523 TGAGTTGCATTTGATGGCGA 58.467 45.000 0.00 0.00 0.00 5.54
582 583 1.885233 TGAGTTGCATTTGATGGCGAA 59.115 42.857 0.00 0.00 0.00 4.70
583 584 2.295629 TGAGTTGCATTTGATGGCGAAA 59.704 40.909 0.00 0.00 0.00 3.46
584 585 3.056678 TGAGTTGCATTTGATGGCGAAAT 60.057 39.130 0.00 0.00 0.00 2.17
585 586 4.157472 TGAGTTGCATTTGATGGCGAAATA 59.843 37.500 0.00 0.00 0.00 1.40
586 587 5.070770 AGTTGCATTTGATGGCGAAATAA 57.929 34.783 0.00 0.00 0.00 1.40
587 588 5.663456 AGTTGCATTTGATGGCGAAATAAT 58.337 33.333 0.00 0.00 0.00 1.28
588 589 5.750067 AGTTGCATTTGATGGCGAAATAATC 59.250 36.000 0.00 0.00 0.00 1.75
601 602 4.365899 GAAATAATCGACCGGCCTTTTT 57.634 40.909 0.00 0.00 0.00 1.94
626 627 1.826327 CAAGCAGACGGTTGTTGTTG 58.174 50.000 0.00 0.00 43.99 3.33
627 628 1.132262 CAAGCAGACGGTTGTTGTTGT 59.868 47.619 0.00 0.00 43.99 3.32
628 629 1.459450 AGCAGACGGTTGTTGTTGTT 58.541 45.000 0.00 0.00 0.00 2.83
629 630 1.132262 AGCAGACGGTTGTTGTTGTTG 59.868 47.619 0.00 0.00 0.00 3.33
630 631 1.135517 GCAGACGGTTGTTGTTGTTGT 60.136 47.619 0.00 0.00 0.00 3.32
631 632 2.669950 GCAGACGGTTGTTGTTGTTGTT 60.670 45.455 0.00 0.00 0.00 2.83
632 633 2.914214 CAGACGGTTGTTGTTGTTGTTG 59.086 45.455 0.00 0.00 0.00 3.33
633 634 2.554893 AGACGGTTGTTGTTGTTGTTGT 59.445 40.909 0.00 0.00 0.00 3.32
634 635 3.004944 AGACGGTTGTTGTTGTTGTTGTT 59.995 39.130 0.00 0.00 0.00 2.83
635 636 3.053455 ACGGTTGTTGTTGTTGTTGTTG 58.947 40.909 0.00 0.00 0.00 3.33
636 637 2.159907 CGGTTGTTGTTGTTGTTGTTGC 60.160 45.455 0.00 0.00 0.00 4.17
637 638 2.159907 GGTTGTTGTTGTTGTTGTTGCG 60.160 45.455 0.00 0.00 0.00 4.85
638 639 1.702886 TGTTGTTGTTGTTGTTGCGG 58.297 45.000 0.00 0.00 0.00 5.69
639 640 0.995728 GTTGTTGTTGTTGTTGCGGG 59.004 50.000 0.00 0.00 0.00 6.13
640 641 0.603569 TTGTTGTTGTTGTTGCGGGT 59.396 45.000 0.00 0.00 0.00 5.28
641 642 0.109086 TGTTGTTGTTGTTGCGGGTG 60.109 50.000 0.00 0.00 0.00 4.61
642 643 0.171455 GTTGTTGTTGTTGCGGGTGA 59.829 50.000 0.00 0.00 0.00 4.02
643 644 0.888619 TTGTTGTTGTTGCGGGTGAA 59.111 45.000 0.00 0.00 0.00 3.18
644 645 0.453793 TGTTGTTGTTGCGGGTGAAG 59.546 50.000 0.00 0.00 0.00 3.02
645 646 0.869880 GTTGTTGTTGCGGGTGAAGC 60.870 55.000 0.00 0.00 0.00 3.86
646 647 1.315981 TTGTTGTTGCGGGTGAAGCA 61.316 50.000 0.00 0.00 43.59 3.91
647 648 1.008538 GTTGTTGCGGGTGAAGCAG 60.009 57.895 0.00 0.00 46.01 4.24
648 649 1.153066 TTGTTGCGGGTGAAGCAGA 60.153 52.632 0.00 0.00 46.01 4.26
649 650 1.444119 TTGTTGCGGGTGAAGCAGAC 61.444 55.000 0.00 0.00 46.01 3.51
650 651 2.664851 TTGCGGGTGAAGCAGACG 60.665 61.111 0.00 0.00 46.01 4.18
651 652 3.158537 TTGCGGGTGAAGCAGACGA 62.159 57.895 0.00 0.00 46.01 4.20
652 653 2.125512 GCGGGTGAAGCAGACGAT 60.126 61.111 0.00 0.00 34.19 3.73
653 654 1.741770 GCGGGTGAAGCAGACGATT 60.742 57.895 0.00 0.00 34.19 3.34
654 655 1.970917 GCGGGTGAAGCAGACGATTG 61.971 60.000 0.00 0.00 34.19 2.67
655 656 0.670546 CGGGTGAAGCAGACGATTGT 60.671 55.000 0.00 0.00 0.00 2.71
656 657 1.523758 GGGTGAAGCAGACGATTGTT 58.476 50.000 0.00 0.00 0.00 2.83
661 662 4.214437 GTGAAGCAGACGATTGTTCAAAG 58.786 43.478 0.00 0.00 0.00 2.77
669 670 6.136071 CAGACGATTGTTCAAAGGTAAAGTG 58.864 40.000 0.00 0.00 0.00 3.16
672 673 7.066525 AGACGATTGTTCAAAGGTAAAGTGAAA 59.933 33.333 0.00 0.00 33.29 2.69
681 682 7.535139 TCAAAGGTAAAGTGAAAGAAGTTGTG 58.465 34.615 0.00 0.00 0.00 3.33
691 692 3.626028 AAGAAGTTGTGCCGATTTGTC 57.374 42.857 0.00 0.00 0.00 3.18
692 693 1.880027 AGAAGTTGTGCCGATTTGTCC 59.120 47.619 0.00 0.00 0.00 4.02
699 700 1.197721 GTGCCGATTTGTCCAGTCTTG 59.802 52.381 0.00 0.00 0.00 3.02
700 701 1.071542 TGCCGATTTGTCCAGTCTTGA 59.928 47.619 0.00 0.00 0.00 3.02
701 702 1.734465 GCCGATTTGTCCAGTCTTGAG 59.266 52.381 0.00 0.00 0.00 3.02
719 720 5.182001 TCTTGAGCTTTGAAAGTTCCATAGC 59.818 40.000 17.23 0.00 37.88 2.97
723 726 5.001232 AGCTTTGAAAGTTCCATAGCGTTA 58.999 37.500 6.81 0.00 41.38 3.18
727 730 5.600908 TGAAAGTTCCATAGCGTTACAAC 57.399 39.130 0.00 0.00 0.00 3.32
730 733 5.607119 AAGTTCCATAGCGTTACAACAAG 57.393 39.130 0.00 0.00 0.00 3.16
746 749 0.249073 CAAGCAGATACGTCCTCGGG 60.249 60.000 0.00 0.00 41.85 5.14
752 755 0.745468 GATACGTCCTCGGGCTCTTT 59.255 55.000 0.00 0.00 41.85 2.52
759 762 0.688087 CCTCGGGCTCTTTACCCTCT 60.688 60.000 0.00 0.00 46.04 3.69
769 772 1.201647 CTTTACCCTCTCTTGCGACGA 59.798 52.381 0.00 0.00 0.00 4.20
775 778 2.123342 CCTCTCTTGCGACGATGAATC 58.877 52.381 0.00 0.00 0.00 2.52
795 798 3.826524 TCTGTCAAGGGCACATGTTTAA 58.173 40.909 0.00 0.00 0.00 1.52
800 803 1.839424 AGGGCACATGTTTAAGGAGC 58.161 50.000 0.00 0.00 0.00 4.70
819 822 3.073144 GCGGCGGCTTTGATAAAAATA 57.927 42.857 9.78 0.00 35.83 1.40
821 824 4.048504 GCGGCGGCTTTGATAAAAATAAT 58.951 39.130 9.78 0.00 35.83 1.28
822 825 4.148174 GCGGCGGCTTTGATAAAAATAATC 59.852 41.667 9.78 0.00 35.83 1.75
823 826 5.277825 CGGCGGCTTTGATAAAAATAATCA 58.722 37.500 7.61 0.00 0.00 2.57
824 827 5.746245 CGGCGGCTTTGATAAAAATAATCAA 59.254 36.000 7.61 0.00 40.63 2.57
825 828 6.420604 CGGCGGCTTTGATAAAAATAATCAAT 59.579 34.615 7.61 0.00 41.62 2.57
826 829 7.358352 CGGCGGCTTTGATAAAAATAATCAATC 60.358 37.037 7.61 0.00 41.62 2.67
853 862 3.986572 CACTCATCCGCTACAGAATGATC 59.013 47.826 0.00 0.00 39.69 2.92
916 940 2.309528 TATACCGCTTGCCACTCTTG 57.690 50.000 0.00 0.00 0.00 3.02
976 1000 2.435059 GAGAGCAACCGGCCAGAC 60.435 66.667 0.00 0.00 46.50 3.51
979 1003 3.842925 GAGCAACCGGCCAGACCAA 62.843 63.158 0.00 0.00 46.50 3.67
1150 1174 2.811317 GCTTCGACCTGCTCCACG 60.811 66.667 0.00 0.00 0.00 4.94
1558 1611 1.690985 GTCAAGGAGGAGGGAGGGG 60.691 68.421 0.00 0.00 0.00 4.79
1560 1613 4.439901 AAGGAGGAGGGAGGGGCC 62.440 72.222 0.00 0.00 0.00 5.80
1715 1768 3.099905 TCACCCTGTACTGGAAGATCAG 58.900 50.000 19.66 4.15 40.40 2.90
2091 2144 1.044790 GGCATGGGTTCAAGATGGGG 61.045 60.000 0.00 0.00 0.00 4.96
2275 2440 6.240894 TGTGAGGCTTTCATAAATCTCAGTT 58.759 36.000 0.00 0.00 38.29 3.16
2276 2441 7.394016 TGTGAGGCTTTCATAAATCTCAGTTA 58.606 34.615 0.00 0.00 38.29 2.24
2277 2442 8.049117 TGTGAGGCTTTCATAAATCTCAGTTAT 58.951 33.333 0.00 0.00 38.29 1.89
2315 2480 5.837437 ACATTCCGAGTGATCTCATACTTC 58.163 41.667 0.00 0.00 40.44 3.01
2316 2481 5.596361 ACATTCCGAGTGATCTCATACTTCT 59.404 40.000 0.00 0.00 40.44 2.85
2317 2482 6.773200 ACATTCCGAGTGATCTCATACTTCTA 59.227 38.462 0.00 0.00 40.44 2.10
2318 2483 7.285629 ACATTCCGAGTGATCTCATACTTCTAA 59.714 37.037 0.00 0.00 40.44 2.10
2319 2484 7.825331 TTCCGAGTGATCTCATACTTCTAAT 57.175 36.000 0.00 0.00 40.44 1.73
2349 2514 3.818961 ATGTGTGCTTCAACTTCATCG 57.181 42.857 0.00 0.00 0.00 3.84
2358 2523 8.726068 TGTGCTTCAACTTCATCGAAATTATTA 58.274 29.630 0.00 0.00 0.00 0.98
2361 2526 9.173939 GCTTCAACTTCATCGAAATTATTATGG 57.826 33.333 0.00 0.00 0.00 2.74
2369 2534 8.874744 TCATCGAAATTATTATGGTCGTTACA 57.125 30.769 0.00 0.00 33.55 2.41
2431 2640 6.639632 AGTTCATTGCATTTTAGTGTGACT 57.360 33.333 0.00 0.00 0.00 3.41
2435 2644 3.266541 TGCATTTTAGTGTGACTTGCG 57.733 42.857 0.00 0.00 32.49 4.85
2455 2664 4.454504 TGCGGAACTTTTCTGGTTAAGATC 59.545 41.667 0.00 0.00 36.54 2.75
2487 2696 8.584157 TGGTTATGCAAATAATTCTCACAAAGT 58.416 29.630 0.00 0.00 0.00 2.66
2507 2716 9.410556 ACAAAGTTAAAATCATAATGACTGCAC 57.589 29.630 0.00 0.00 0.00 4.57
2520 2729 9.920133 CATAATGACTGCACTAGTATTCTACAT 57.080 33.333 0.00 0.00 40.53 2.29
2609 2818 7.930325 AGTAAGTTTAAAGTACTCTTGACACCC 59.070 37.037 0.00 0.00 33.79 4.61
2611 2820 6.053650 AGTTTAAAGTACTCTTGACACCCAC 58.946 40.000 0.00 0.00 33.79 4.61
2654 2863 9.988350 ATAATTTAAGAACAAGAATGCTACACG 57.012 29.630 0.00 0.00 0.00 4.49
2655 2864 7.667043 ATTTAAGAACAAGAATGCTACACGA 57.333 32.000 0.00 0.00 0.00 4.35
2656 2865 6.706055 TTAAGAACAAGAATGCTACACGAG 57.294 37.500 0.00 0.00 0.00 4.18
2664 2873 3.121019 GCTACACGAGCGGAGGAT 58.879 61.111 0.00 0.00 42.62 3.24
2665 2874 1.437986 GCTACACGAGCGGAGGATT 59.562 57.895 0.00 0.00 42.62 3.01
2666 2875 0.666913 GCTACACGAGCGGAGGATTA 59.333 55.000 0.00 0.00 42.62 1.75
2667 2876 1.599916 GCTACACGAGCGGAGGATTAC 60.600 57.143 0.00 0.00 42.62 1.89
2668 2877 0.659427 TACACGAGCGGAGGATTACG 59.341 55.000 0.00 0.00 0.00 3.18
2669 2878 1.028330 ACACGAGCGGAGGATTACGA 61.028 55.000 0.00 0.00 0.00 3.43
2670 2879 0.099968 CACGAGCGGAGGATTACGAA 59.900 55.000 0.00 0.00 0.00 3.85
2671 2880 0.100146 ACGAGCGGAGGATTACGAAC 59.900 55.000 0.00 0.00 0.00 3.95
2672 2881 0.099968 CGAGCGGAGGATTACGAACA 59.900 55.000 0.00 0.00 0.00 3.18
2673 2882 1.468565 CGAGCGGAGGATTACGAACAA 60.469 52.381 0.00 0.00 0.00 2.83
2674 2883 2.613691 GAGCGGAGGATTACGAACAAA 58.386 47.619 0.00 0.00 0.00 2.83
2675 2884 2.997986 GAGCGGAGGATTACGAACAAAA 59.002 45.455 0.00 0.00 0.00 2.44
2676 2885 3.606687 AGCGGAGGATTACGAACAAAAT 58.393 40.909 0.00 0.00 0.00 1.82
2677 2886 4.007659 AGCGGAGGATTACGAACAAAATT 58.992 39.130 0.00 0.00 0.00 1.82
2678 2887 4.095610 GCGGAGGATTACGAACAAAATTG 58.904 43.478 0.00 0.00 0.00 2.32
2679 2888 4.142773 GCGGAGGATTACGAACAAAATTGA 60.143 41.667 0.00 0.00 0.00 2.57
2680 2889 5.321516 CGGAGGATTACGAACAAAATTGAC 58.678 41.667 0.00 0.00 0.00 3.18
2681 2890 5.121768 CGGAGGATTACGAACAAAATTGACT 59.878 40.000 0.00 0.00 0.00 3.41
2682 2891 6.348213 CGGAGGATTACGAACAAAATTGACTT 60.348 38.462 0.00 0.00 0.00 3.01
2683 2892 7.148540 CGGAGGATTACGAACAAAATTGACTTA 60.149 37.037 0.00 0.00 0.00 2.24
2684 2893 7.961283 GGAGGATTACGAACAAAATTGACTTAC 59.039 37.037 0.00 0.00 0.00 2.34
2685 2894 8.385898 AGGATTACGAACAAAATTGACTTACA 57.614 30.769 0.00 0.00 0.00 2.41
2807 3016 0.903942 TAAACTGGCCGTCGGGTTAT 59.096 50.000 14.38 3.32 33.01 1.89
2870 3079 0.807667 GACCTAGCCACAGACATGCG 60.808 60.000 0.00 0.00 0.00 4.73
2921 3130 1.996187 TATAACTGTGGGCCCGGCA 60.996 57.895 19.37 17.81 0.00 5.69
2964 3173 1.743623 CGCCGTCAAACCTATGCCA 60.744 57.895 0.00 0.00 0.00 4.92
2965 3174 1.705337 CGCCGTCAAACCTATGCCAG 61.705 60.000 0.00 0.00 0.00 4.85
3110 3319 3.005261 CAGAACTCTGCCGTATCTATGCT 59.995 47.826 0.00 0.00 37.15 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.956633 AGTTGCCATGTGCTCACAAG 59.043 50.000 6.81 2.57 45.41 3.16
7 8 0.953727 GAGTTGCCATGTGCTCACAA 59.046 50.000 6.81 0.00 45.41 3.33
8 9 0.109153 AGAGTTGCCATGTGCTCACA 59.891 50.000 5.08 5.08 46.44 3.58
9 10 0.801251 GAGAGTTGCCATGTGCTCAC 59.199 55.000 7.54 0.00 42.00 3.51
10 11 0.689055 AGAGAGTTGCCATGTGCTCA 59.311 50.000 7.54 0.00 42.00 4.26
11 12 1.338484 TGAGAGAGTTGCCATGTGCTC 60.338 52.381 7.54 0.00 42.00 4.26
12 13 0.689055 TGAGAGAGTTGCCATGTGCT 59.311 50.000 7.54 0.00 42.00 4.40
13 14 1.198637 GTTGAGAGAGTTGCCATGTGC 59.801 52.381 0.00 0.00 41.77 4.57
14 15 2.483106 CAGTTGAGAGAGTTGCCATGTG 59.517 50.000 0.00 0.00 0.00 3.21
15 16 2.775890 CAGTTGAGAGAGTTGCCATGT 58.224 47.619 0.00 0.00 0.00 3.21
16 17 1.467734 GCAGTTGAGAGAGTTGCCATG 59.532 52.381 0.00 0.00 0.00 3.66
17 18 1.818642 GCAGTTGAGAGAGTTGCCAT 58.181 50.000 0.00 0.00 0.00 4.40
18 19 3.312404 GCAGTTGAGAGAGTTGCCA 57.688 52.632 0.00 0.00 0.00 4.92
19 20 2.549332 GGCAGTTGAGAGAGTTGCC 58.451 57.895 0.00 0.00 46.39 4.52
20 21 2.028567 ACTAGGCAGTTGAGAGAGTTGC 60.029 50.000 0.00 0.00 0.00 4.17
21 22 3.006323 ACACTAGGCAGTTGAGAGAGTTG 59.994 47.826 0.00 0.00 30.46 3.16
22 23 3.235200 ACACTAGGCAGTTGAGAGAGTT 58.765 45.455 0.00 0.00 30.46 3.01
23 24 2.883026 ACACTAGGCAGTTGAGAGAGT 58.117 47.619 0.00 0.00 30.46 3.24
24 25 3.951775 AACACTAGGCAGTTGAGAGAG 57.048 47.619 0.00 0.00 30.46 3.20
25 26 4.408276 ACTAACACTAGGCAGTTGAGAGA 58.592 43.478 7.49 0.00 30.46 3.10
26 27 4.792521 ACTAACACTAGGCAGTTGAGAG 57.207 45.455 7.49 1.59 30.46 3.20
27 28 5.715279 ACATACTAACACTAGGCAGTTGAGA 59.285 40.000 7.49 0.00 30.46 3.27
28 29 5.807520 CACATACTAACACTAGGCAGTTGAG 59.192 44.000 7.49 4.79 30.46 3.02
29 30 5.337250 CCACATACTAACACTAGGCAGTTGA 60.337 44.000 7.49 0.00 30.46 3.18
30 31 4.870426 CCACATACTAACACTAGGCAGTTG 59.130 45.833 7.49 0.00 30.46 3.16
31 32 4.623171 GCCACATACTAACACTAGGCAGTT 60.623 45.833 0.00 0.00 40.50 3.16
32 33 3.118738 GCCACATACTAACACTAGGCAGT 60.119 47.826 0.00 0.00 40.50 4.40
33 34 3.118775 TGCCACATACTAACACTAGGCAG 60.119 47.826 0.00 0.00 45.10 4.85
34 35 3.536956 GCCACATACTAACACTAGGCA 57.463 47.619 0.00 0.00 40.50 4.75
35 36 3.536956 TGCCACATACTAACACTAGGC 57.463 47.619 0.00 0.00 41.15 3.93
36 37 5.086104 AGTTGCCACATACTAACACTAGG 57.914 43.478 0.00 0.00 0.00 3.02
37 38 5.105310 AGGAGTTGCCACATACTAACACTAG 60.105 44.000 0.00 0.00 40.02 2.57
38 39 4.775780 AGGAGTTGCCACATACTAACACTA 59.224 41.667 0.00 0.00 40.02 2.74
39 40 3.583086 AGGAGTTGCCACATACTAACACT 59.417 43.478 0.00 0.00 40.02 3.55
40 41 3.939066 AGGAGTTGCCACATACTAACAC 58.061 45.455 0.00 0.00 40.02 3.32
41 42 5.748670 TTAGGAGTTGCCACATACTAACA 57.251 39.130 0.00 0.00 40.02 2.41
42 43 6.171213 ACTTTAGGAGTTGCCACATACTAAC 58.829 40.000 0.00 0.00 40.02 2.34
43 44 6.368779 ACTTTAGGAGTTGCCACATACTAA 57.631 37.500 0.00 0.00 40.02 2.24
44 45 6.368779 AACTTTAGGAGTTGCCACATACTA 57.631 37.500 0.00 0.00 46.66 1.82
45 46 4.910458 ACTTTAGGAGTTGCCACATACT 57.090 40.909 0.00 0.00 40.02 2.12
56 57 7.118723 TGCCATGATTTCATAACTTTAGGAGT 58.881 34.615 0.00 0.00 35.57 3.85
57 58 7.572523 TGCCATGATTTCATAACTTTAGGAG 57.427 36.000 0.00 0.00 34.26 3.69
58 59 7.615365 AGTTGCCATGATTTCATAACTTTAGGA 59.385 33.333 0.00 0.00 31.98 2.94
59 60 7.775120 AGTTGCCATGATTTCATAACTTTAGG 58.225 34.615 0.00 0.00 31.98 2.69
60 61 9.722056 GTAGTTGCCATGATTTCATAACTTTAG 57.278 33.333 10.76 0.00 35.49 1.85
61 62 9.237187 TGTAGTTGCCATGATTTCATAACTTTA 57.763 29.630 10.76 1.92 35.49 1.85
62 63 8.121305 TGTAGTTGCCATGATTTCATAACTTT 57.879 30.769 10.76 0.00 35.49 2.66
63 64 7.701539 TGTAGTTGCCATGATTTCATAACTT 57.298 32.000 10.76 0.42 35.49 2.66
64 65 7.886629 ATGTAGTTGCCATGATTTCATAACT 57.113 32.000 10.46 10.46 36.87 2.24
65 66 9.669353 CTAATGTAGTTGCCATGATTTCATAAC 57.331 33.333 0.00 0.00 34.26 1.89
66 67 9.625747 TCTAATGTAGTTGCCATGATTTCATAA 57.374 29.630 0.00 0.00 34.26 1.90
67 68 9.797642 ATCTAATGTAGTTGCCATGATTTCATA 57.202 29.630 0.00 0.00 34.26 2.15
68 69 8.701908 ATCTAATGTAGTTGCCATGATTTCAT 57.298 30.769 0.00 0.00 36.96 2.57
69 70 7.774625 TGATCTAATGTAGTTGCCATGATTTCA 59.225 33.333 0.00 0.00 0.00 2.69
70 71 8.158169 TGATCTAATGTAGTTGCCATGATTTC 57.842 34.615 0.00 0.00 0.00 2.17
71 72 7.994911 TCTGATCTAATGTAGTTGCCATGATTT 59.005 33.333 0.00 0.00 0.00 2.17
72 73 7.443575 GTCTGATCTAATGTAGTTGCCATGATT 59.556 37.037 0.00 0.00 0.00 2.57
73 74 6.933521 GTCTGATCTAATGTAGTTGCCATGAT 59.066 38.462 0.00 0.00 0.00 2.45
74 75 6.098838 AGTCTGATCTAATGTAGTTGCCATGA 59.901 38.462 0.00 0.00 0.00 3.07
75 76 6.286758 AGTCTGATCTAATGTAGTTGCCATG 58.713 40.000 0.00 0.00 0.00 3.66
76 77 6.491714 AGTCTGATCTAATGTAGTTGCCAT 57.508 37.500 0.00 0.00 0.00 4.40
77 78 5.939764 AGTCTGATCTAATGTAGTTGCCA 57.060 39.130 0.00 0.00 0.00 4.92
78 79 8.577296 TGTATAGTCTGATCTAATGTAGTTGCC 58.423 37.037 0.00 0.00 0.00 4.52
82 83 8.744652 GCCATGTATAGTCTGATCTAATGTAGT 58.255 37.037 0.00 0.00 0.00 2.73
83 84 8.743714 TGCCATGTATAGTCTGATCTAATGTAG 58.256 37.037 0.00 0.00 0.00 2.74
84 85 8.650143 TGCCATGTATAGTCTGATCTAATGTA 57.350 34.615 0.00 0.00 0.00 2.29
85 86 7.544804 TGCCATGTATAGTCTGATCTAATGT 57.455 36.000 0.00 0.00 0.00 2.71
86 87 9.445878 AATTGCCATGTATAGTCTGATCTAATG 57.554 33.333 0.00 0.00 0.00 1.90
87 88 9.445878 CAATTGCCATGTATAGTCTGATCTAAT 57.554 33.333 0.00 0.00 0.00 1.73
88 89 7.388776 GCAATTGCCATGTATAGTCTGATCTAA 59.611 37.037 20.06 0.00 34.31 2.10
89 90 6.875726 GCAATTGCCATGTATAGTCTGATCTA 59.124 38.462 20.06 0.00 34.31 1.98
90 91 5.704515 GCAATTGCCATGTATAGTCTGATCT 59.295 40.000 20.06 0.00 34.31 2.75
91 92 5.471116 TGCAATTGCCATGTATAGTCTGATC 59.529 40.000 26.94 0.00 41.18 2.92
92 93 5.379187 TGCAATTGCCATGTATAGTCTGAT 58.621 37.500 26.94 0.00 41.18 2.90
93 94 4.779696 TGCAATTGCCATGTATAGTCTGA 58.220 39.130 26.94 0.40 41.18 3.27
94 95 4.577693 ACTGCAATTGCCATGTATAGTCTG 59.422 41.667 26.94 2.78 41.18 3.51
95 96 4.785301 ACTGCAATTGCCATGTATAGTCT 58.215 39.130 26.94 0.00 41.18 3.24
96 97 5.066375 TCAACTGCAATTGCCATGTATAGTC 59.934 40.000 26.94 0.00 41.18 2.59
97 98 4.949238 TCAACTGCAATTGCCATGTATAGT 59.051 37.500 26.94 18.07 41.18 2.12
98 99 5.503662 TCAACTGCAATTGCCATGTATAG 57.496 39.130 26.94 17.44 41.18 1.31
99 100 4.202040 GCTCAACTGCAATTGCCATGTATA 60.202 41.667 26.94 12.92 41.18 1.47
100 101 3.429822 GCTCAACTGCAATTGCCATGTAT 60.430 43.478 26.94 11.04 41.18 2.29
101 102 2.094597 GCTCAACTGCAATTGCCATGTA 60.095 45.455 26.94 7.59 41.18 2.29
102 103 1.337447 GCTCAACTGCAATTGCCATGT 60.337 47.619 26.94 19.06 41.18 3.21
103 104 1.337354 TGCTCAACTGCAATTGCCATG 60.337 47.619 26.94 21.04 40.29 3.66
104 105 0.970640 TGCTCAACTGCAATTGCCAT 59.029 45.000 26.94 12.64 40.29 4.40
105 106 0.751452 TTGCTCAACTGCAATTGCCA 59.249 45.000 26.94 13.04 46.43 4.92
106 107 3.591979 TTGCTCAACTGCAATTGCC 57.408 47.368 26.94 10.52 46.43 4.52
112 113 1.808531 GCCATGGTTGCTCAACTGCA 61.809 55.000 14.67 3.93 40.94 4.41
113 114 1.080298 GCCATGGTTGCTCAACTGC 60.080 57.895 14.67 6.92 40.94 4.40
114 115 0.675083 TTGCCATGGTTGCTCAACTG 59.325 50.000 14.67 4.33 40.94 3.16
115 116 0.675633 GTTGCCATGGTTGCTCAACT 59.324 50.000 19.25 0.00 40.94 3.16
116 117 0.675633 AGTTGCCATGGTTGCTCAAC 59.324 50.000 19.02 19.02 40.45 3.18
117 118 0.675083 CAGTTGCCATGGTTGCTCAA 59.325 50.000 14.67 5.59 0.00 3.02
118 119 1.808531 GCAGTTGCCATGGTTGCTCA 61.809 55.000 14.67 0.00 34.31 4.26
119 120 1.080298 GCAGTTGCCATGGTTGCTC 60.080 57.895 14.67 0.00 34.31 4.26
120 121 1.812686 CTGCAGTTGCCATGGTTGCT 61.813 55.000 23.42 13.48 41.18 3.91
121 122 1.373748 CTGCAGTTGCCATGGTTGC 60.374 57.895 14.67 17.56 41.18 4.17
122 123 0.390124 AACTGCAGTTGCCATGGTTG 59.610 50.000 30.66 8.32 41.18 3.77
123 124 2.824961 AACTGCAGTTGCCATGGTT 58.175 47.368 30.66 3.41 41.18 3.67
124 125 4.605064 AACTGCAGTTGCCATGGT 57.395 50.000 30.66 4.24 41.18 3.55
132 133 1.229428 CATGTCGGACAACTGCAGTT 58.771 50.000 26.36 26.36 39.12 3.16
133 134 0.603707 CCATGTCGGACAACTGCAGT 60.604 55.000 15.25 15.25 36.56 4.40
134 135 1.915614 GCCATGTCGGACAACTGCAG 61.916 60.000 15.72 13.48 36.56 4.41
135 136 1.965930 GCCATGTCGGACAACTGCA 60.966 57.895 15.72 0.00 36.56 4.41
136 137 1.514678 TTGCCATGTCGGACAACTGC 61.515 55.000 15.72 16.90 36.56 4.40
137 138 1.131126 GATTGCCATGTCGGACAACTG 59.869 52.381 15.72 9.71 34.82 3.16
138 139 1.453155 GATTGCCATGTCGGACAACT 58.547 50.000 15.72 0.00 34.82 3.16
139 140 0.096976 CGATTGCCATGTCGGACAAC 59.903 55.000 15.72 8.42 34.82 3.32
140 141 0.321210 ACGATTGCCATGTCGGACAA 60.321 50.000 15.72 0.00 41.87 3.18
141 142 0.533032 TACGATTGCCATGTCGGACA 59.467 50.000 14.01 14.01 41.87 4.02
142 143 1.209128 CTACGATTGCCATGTCGGAC 58.791 55.000 0.00 0.00 41.87 4.79
143 144 0.821517 ACTACGATTGCCATGTCGGA 59.178 50.000 8.14 0.00 41.87 4.55
144 145 1.593006 GAACTACGATTGCCATGTCGG 59.407 52.381 8.14 0.00 41.87 4.79
145 146 2.267426 TGAACTACGATTGCCATGTCG 58.733 47.619 2.22 2.22 43.13 4.35
146 147 2.030946 GCTGAACTACGATTGCCATGTC 59.969 50.000 0.00 0.00 0.00 3.06
147 148 2.009774 GCTGAACTACGATTGCCATGT 58.990 47.619 0.00 0.00 0.00 3.21
148 149 1.004610 CGCTGAACTACGATTGCCATG 60.005 52.381 0.00 0.00 0.00 3.66
149 150 1.134818 TCGCTGAACTACGATTGCCAT 60.135 47.619 0.00 0.00 32.45 4.40
150 151 0.245266 TCGCTGAACTACGATTGCCA 59.755 50.000 0.00 0.00 32.45 4.92
151 152 0.645868 GTCGCTGAACTACGATTGCC 59.354 55.000 0.00 0.00 40.90 4.52
152 153 1.346365 TGTCGCTGAACTACGATTGC 58.654 50.000 0.00 0.00 40.90 3.56
153 154 2.282555 CCATGTCGCTGAACTACGATTG 59.717 50.000 0.00 0.00 40.90 2.67
154 155 2.540515 CCATGTCGCTGAACTACGATT 58.459 47.619 0.00 0.00 40.90 3.34
155 156 1.802880 GCCATGTCGCTGAACTACGAT 60.803 52.381 0.00 0.00 40.90 3.73
156 157 0.457853 GCCATGTCGCTGAACTACGA 60.458 55.000 0.00 0.00 35.62 3.43
157 158 0.735978 TGCCATGTCGCTGAACTACG 60.736 55.000 0.00 0.00 0.00 3.51
158 159 1.128692 GTTGCCATGTCGCTGAACTAC 59.871 52.381 0.00 0.00 0.00 2.73
159 160 1.001974 AGTTGCCATGTCGCTGAACTA 59.998 47.619 0.00 0.00 0.00 2.24
160 161 0.250467 AGTTGCCATGTCGCTGAACT 60.250 50.000 0.00 0.00 0.00 3.01
161 162 0.110056 CAGTTGCCATGTCGCTGAAC 60.110 55.000 0.00 0.00 0.00 3.18
162 163 1.855213 GCAGTTGCCATGTCGCTGAA 61.855 55.000 2.90 0.00 34.31 3.02
163 164 2.327343 GCAGTTGCCATGTCGCTGA 61.327 57.895 2.90 0.00 34.31 4.26
164 165 2.177531 GCAGTTGCCATGTCGCTG 59.822 61.111 0.00 0.00 34.31 5.18
165 166 2.281692 TGCAGTTGCCATGTCGCT 60.282 55.556 1.06 0.00 41.18 4.93
166 167 1.651240 ATCTGCAGTTGCCATGTCGC 61.651 55.000 14.67 0.00 41.18 5.19
167 168 1.655484 TATCTGCAGTTGCCATGTCG 58.345 50.000 14.67 0.00 41.18 4.35
168 169 3.728864 CGTTTATCTGCAGTTGCCATGTC 60.729 47.826 14.67 0.00 41.18 3.06
169 170 2.162208 CGTTTATCTGCAGTTGCCATGT 59.838 45.455 14.67 0.00 41.18 3.21
170 171 2.419673 TCGTTTATCTGCAGTTGCCATG 59.580 45.455 14.67 1.44 41.18 3.66
171 172 2.710377 TCGTTTATCTGCAGTTGCCAT 58.290 42.857 14.67 1.49 41.18 4.40
172 173 2.177394 TCGTTTATCTGCAGTTGCCA 57.823 45.000 14.67 0.00 41.18 4.92
173 174 2.225491 TGTTCGTTTATCTGCAGTTGCC 59.775 45.455 14.67 0.00 41.18 4.52
174 175 3.536158 TGTTCGTTTATCTGCAGTTGC 57.464 42.857 14.67 0.00 42.50 4.17
175 176 4.154015 TCCATGTTCGTTTATCTGCAGTTG 59.846 41.667 14.67 0.00 0.00 3.16
176 177 4.154195 GTCCATGTTCGTTTATCTGCAGTT 59.846 41.667 14.67 8.22 0.00 3.16
177 178 3.684788 GTCCATGTTCGTTTATCTGCAGT 59.315 43.478 14.67 3.75 0.00 4.40
178 179 3.242091 CGTCCATGTTCGTTTATCTGCAG 60.242 47.826 7.63 7.63 0.00 4.41
179 180 2.670905 CGTCCATGTTCGTTTATCTGCA 59.329 45.455 0.00 0.00 0.00 4.41
180 181 2.927477 TCGTCCATGTTCGTTTATCTGC 59.073 45.455 6.65 0.00 0.00 4.26
181 182 3.551890 CCTCGTCCATGTTCGTTTATCTG 59.448 47.826 6.65 0.00 0.00 2.90
182 183 3.430374 CCCTCGTCCATGTTCGTTTATCT 60.430 47.826 6.65 0.00 0.00 1.98
183 184 2.864343 CCCTCGTCCATGTTCGTTTATC 59.136 50.000 6.65 0.00 0.00 1.75
184 185 2.235402 ACCCTCGTCCATGTTCGTTTAT 59.765 45.455 6.65 0.00 0.00 1.40
185 186 1.619827 ACCCTCGTCCATGTTCGTTTA 59.380 47.619 6.65 0.00 0.00 2.01
186 187 0.395312 ACCCTCGTCCATGTTCGTTT 59.605 50.000 6.65 0.00 0.00 3.60
187 188 0.037605 GACCCTCGTCCATGTTCGTT 60.038 55.000 6.65 0.00 32.40 3.85
188 189 0.898789 AGACCCTCGTCCATGTTCGT 60.899 55.000 6.65 0.00 40.12 3.85
189 190 0.458543 CAGACCCTCGTCCATGTTCG 60.459 60.000 0.00 0.00 40.12 3.95
190 191 0.108138 CCAGACCCTCGTCCATGTTC 60.108 60.000 0.00 0.00 40.12 3.18
191 192 0.544357 TCCAGACCCTCGTCCATGTT 60.544 55.000 0.00 0.00 40.12 2.71
192 193 1.078528 TCCAGACCCTCGTCCATGT 59.921 57.895 0.00 0.00 40.12 3.21
193 194 1.517832 GTCCAGACCCTCGTCCATG 59.482 63.158 0.00 0.00 40.12 3.66
194 195 1.686110 GGTCCAGACCCTCGTCCAT 60.686 63.158 5.46 0.00 45.68 3.41
195 196 2.283676 GGTCCAGACCCTCGTCCA 60.284 66.667 5.46 0.00 45.68 4.02
204 205 1.589716 GCAGTTGCCATGGTCCAGAC 61.590 60.000 14.67 5.40 34.31 3.51
205 206 1.303561 GCAGTTGCCATGGTCCAGA 60.304 57.895 14.67 0.00 34.31 3.86
206 207 2.693762 CGCAGTTGCCATGGTCCAG 61.694 63.158 14.67 1.29 37.91 3.86
207 208 2.672651 CGCAGTTGCCATGGTCCA 60.673 61.111 14.67 0.00 37.91 4.02
208 209 2.359850 TCGCAGTTGCCATGGTCC 60.360 61.111 14.67 1.25 37.91 4.46
209 210 3.044059 GCTCGCAGTTGCCATGGTC 62.044 63.158 14.67 6.41 37.91 4.02
210 211 3.058160 GCTCGCAGTTGCCATGGT 61.058 61.111 14.67 0.00 37.91 3.55
211 212 4.170062 CGCTCGCAGTTGCCATGG 62.170 66.667 7.63 7.63 37.91 3.66
212 213 4.824166 GCGCTCGCAGTTGCCATG 62.824 66.667 9.59 0.00 41.49 3.66
250 251 4.760047 CCCTTCTGGTCCCGCACG 62.760 72.222 0.00 0.00 0.00 5.34
259 260 1.686110 AGGCCTCGTACCCTTCTGG 60.686 63.158 0.00 0.00 41.37 3.86
260 261 0.970937 TCAGGCCTCGTACCCTTCTG 60.971 60.000 0.00 0.00 0.00 3.02
261 262 0.971447 GTCAGGCCTCGTACCCTTCT 60.971 60.000 0.00 0.00 0.00 2.85
262 263 1.255667 TGTCAGGCCTCGTACCCTTC 61.256 60.000 0.00 0.00 0.00 3.46
263 264 0.617820 ATGTCAGGCCTCGTACCCTT 60.618 55.000 0.00 0.00 0.00 3.95
264 265 0.260816 TATGTCAGGCCTCGTACCCT 59.739 55.000 0.00 0.00 0.00 4.34
265 266 0.388294 GTATGTCAGGCCTCGTACCC 59.612 60.000 0.00 0.00 0.00 3.69
266 267 0.030369 CGTATGTCAGGCCTCGTACC 59.970 60.000 0.00 0.00 0.00 3.34
267 268 0.030369 CCGTATGTCAGGCCTCGTAC 59.970 60.000 0.00 8.08 0.00 3.67
268 269 1.105167 CCCGTATGTCAGGCCTCGTA 61.105 60.000 0.00 0.00 0.00 3.43
269 270 2.423898 CCCGTATGTCAGGCCTCGT 61.424 63.158 0.00 0.00 0.00 4.18
270 271 2.417516 CCCGTATGTCAGGCCTCG 59.582 66.667 0.00 1.29 0.00 4.63
271 272 2.109181 GCCCGTATGTCAGGCCTC 59.891 66.667 0.00 0.00 41.00 4.70
272 273 3.849951 CGCCCGTATGTCAGGCCT 61.850 66.667 0.00 0.00 44.13 5.19
273 274 4.157120 ACGCCCGTATGTCAGGCC 62.157 66.667 0.00 0.00 44.13 5.19
274 275 2.890474 CACGCCCGTATGTCAGGC 60.890 66.667 0.00 0.00 43.53 4.85
275 276 1.809619 CACACGCCCGTATGTCAGG 60.810 63.158 0.00 0.00 0.00 3.86
276 277 1.809619 CCACACGCCCGTATGTCAG 60.810 63.158 0.00 0.00 0.00 3.51
277 278 2.263227 CCACACGCCCGTATGTCA 59.737 61.111 0.00 0.00 0.00 3.58
278 279 2.510691 CCCACACGCCCGTATGTC 60.511 66.667 0.00 0.00 0.00 3.06
279 280 4.770874 GCCCACACGCCCGTATGT 62.771 66.667 0.00 0.00 0.00 2.29
285 286 3.199891 GATAACGCCCACACGCCC 61.200 66.667 0.00 0.00 36.19 6.13
286 287 2.036006 TTGATAACGCCCACACGCC 61.036 57.895 0.00 0.00 36.19 5.68
287 288 1.133869 GTTGATAACGCCCACACGC 59.866 57.895 0.00 0.00 36.19 5.34
288 289 1.127951 GAAGTTGATAACGCCCACACG 59.872 52.381 0.00 0.00 36.23 4.49
289 290 1.127951 CGAAGTTGATAACGCCCACAC 59.872 52.381 0.00 0.00 36.23 3.82
290 291 1.434555 CGAAGTTGATAACGCCCACA 58.565 50.000 0.00 0.00 36.23 4.17
291 292 0.725117 CCGAAGTTGATAACGCCCAC 59.275 55.000 0.00 0.00 36.23 4.61
292 293 1.022451 GCCGAAGTTGATAACGCCCA 61.022 55.000 0.00 0.00 36.23 5.36
293 294 1.712018 GGCCGAAGTTGATAACGCCC 61.712 60.000 0.00 0.00 36.23 6.13
294 295 1.022451 TGGCCGAAGTTGATAACGCC 61.022 55.000 0.00 0.00 36.23 5.68
295 296 0.096454 GTGGCCGAAGTTGATAACGC 59.904 55.000 0.00 0.00 36.23 4.84
296 297 1.127951 GTGTGGCCGAAGTTGATAACG 59.872 52.381 0.00 0.00 36.23 3.18
297 298 1.127951 CGTGTGGCCGAAGTTGATAAC 59.872 52.381 0.00 0.00 0.00 1.89
298 299 1.434555 CGTGTGGCCGAAGTTGATAA 58.565 50.000 0.00 0.00 0.00 1.75
299 300 1.017177 GCGTGTGGCCGAAGTTGATA 61.017 55.000 0.00 0.00 34.80 2.15
300 301 2.325082 GCGTGTGGCCGAAGTTGAT 61.325 57.895 0.00 0.00 34.80 2.57
301 302 2.970324 GCGTGTGGCCGAAGTTGA 60.970 61.111 0.00 0.00 34.80 3.18
302 303 3.276091 TGCGTGTGGCCGAAGTTG 61.276 61.111 0.00 0.00 42.61 3.16
303 304 3.276846 GTGCGTGTGGCCGAAGTT 61.277 61.111 0.00 0.00 42.61 2.66
317 318 4.664677 ACCCTCTCACACGCGTGC 62.665 66.667 37.35 0.00 43.28 5.34
318 319 2.022129 GAACCCTCTCACACGCGTG 61.022 63.158 35.99 35.99 45.08 5.34
319 320 2.338984 GAACCCTCTCACACGCGT 59.661 61.111 5.58 5.58 0.00 6.01
320 321 1.734477 CTGAACCCTCTCACACGCG 60.734 63.158 3.53 3.53 0.00 6.01
321 322 1.374758 CCTGAACCCTCTCACACGC 60.375 63.158 0.00 0.00 0.00 5.34
322 323 0.244994 CTCCTGAACCCTCTCACACG 59.755 60.000 0.00 0.00 0.00 4.49
323 324 0.610687 CCTCCTGAACCCTCTCACAC 59.389 60.000 0.00 0.00 0.00 3.82
324 325 0.545309 CCCTCCTGAACCCTCTCACA 60.545 60.000 0.00 0.00 0.00 3.58
325 326 0.252284 TCCCTCCTGAACCCTCTCAC 60.252 60.000 0.00 0.00 0.00 3.51
326 327 0.491823 TTCCCTCCTGAACCCTCTCA 59.508 55.000 0.00 0.00 0.00 3.27
327 328 1.657804 TTTCCCTCCTGAACCCTCTC 58.342 55.000 0.00 0.00 0.00 3.20
328 329 2.133858 TTTTCCCTCCTGAACCCTCT 57.866 50.000 0.00 0.00 0.00 3.69
329 330 2.971901 TTTTTCCCTCCTGAACCCTC 57.028 50.000 0.00 0.00 0.00 4.30
345 346 4.588528 ACTAATGCCCACACACATCTTTTT 59.411 37.500 0.00 0.00 0.00 1.94
346 347 4.151883 ACTAATGCCCACACACATCTTTT 58.848 39.130 0.00 0.00 0.00 2.27
347 348 3.766545 ACTAATGCCCACACACATCTTT 58.233 40.909 0.00 0.00 0.00 2.52
348 349 3.439857 ACTAATGCCCACACACATCTT 57.560 42.857 0.00 0.00 0.00 2.40
349 350 3.084039 CAACTAATGCCCACACACATCT 58.916 45.455 0.00 0.00 0.00 2.90
350 351 2.819608 ACAACTAATGCCCACACACATC 59.180 45.455 0.00 0.00 0.00 3.06
351 352 2.875296 ACAACTAATGCCCACACACAT 58.125 42.857 0.00 0.00 0.00 3.21
352 353 2.356665 ACAACTAATGCCCACACACA 57.643 45.000 0.00 0.00 0.00 3.72
353 354 3.726291 AAACAACTAATGCCCACACAC 57.274 42.857 0.00 0.00 0.00 3.82
354 355 3.739519 GCAAAACAACTAATGCCCACACA 60.740 43.478 0.00 0.00 32.73 3.72
355 356 2.799978 GCAAAACAACTAATGCCCACAC 59.200 45.455 0.00 0.00 32.73 3.82
356 357 3.104843 GCAAAACAACTAATGCCCACA 57.895 42.857 0.00 0.00 32.73 4.17
361 362 2.799978 GTGTGGGCAAAACAACTAATGC 59.200 45.455 0.00 0.00 38.06 3.56
362 363 3.049206 CGTGTGGGCAAAACAACTAATG 58.951 45.455 0.00 0.00 0.00 1.90
363 364 2.691011 ACGTGTGGGCAAAACAACTAAT 59.309 40.909 0.00 0.00 0.00 1.73
364 365 2.093106 ACGTGTGGGCAAAACAACTAA 58.907 42.857 0.00 0.00 0.00 2.24
365 366 1.752683 ACGTGTGGGCAAAACAACTA 58.247 45.000 0.00 0.00 0.00 2.24
366 367 1.673920 CTACGTGTGGGCAAAACAACT 59.326 47.619 0.00 0.00 0.00 3.16
367 368 1.268845 CCTACGTGTGGGCAAAACAAC 60.269 52.381 0.00 0.00 0.00 3.32
368 369 1.025812 CCTACGTGTGGGCAAAACAA 58.974 50.000 0.00 0.00 0.00 2.83
369 370 0.107116 ACCTACGTGTGGGCAAAACA 60.107 50.000 12.88 0.00 34.14 2.83
370 371 0.309612 CACCTACGTGTGGGCAAAAC 59.690 55.000 12.88 0.00 35.10 2.43
371 372 2.709170 CACCTACGTGTGGGCAAAA 58.291 52.632 12.88 0.00 35.10 2.44
372 373 4.466133 CACCTACGTGTGGGCAAA 57.534 55.556 12.88 0.00 35.10 3.68
380 381 1.667830 CAGCCCACACACCTACGTG 60.668 63.158 0.00 0.00 46.11 4.49
381 382 2.741092 CAGCCCACACACCTACGT 59.259 61.111 0.00 0.00 0.00 3.57
382 383 2.047274 CCAGCCCACACACCTACG 60.047 66.667 0.00 0.00 0.00 3.51
383 384 0.889186 CAACCAGCCCACACACCTAC 60.889 60.000 0.00 0.00 0.00 3.18
384 385 1.454104 CAACCAGCCCACACACCTA 59.546 57.895 0.00 0.00 0.00 3.08
385 386 2.195683 CAACCAGCCCACACACCT 59.804 61.111 0.00 0.00 0.00 4.00
386 387 3.605664 GCAACCAGCCCACACACC 61.606 66.667 0.00 0.00 37.23 4.16
395 396 0.890542 TGACATGGACAGCAACCAGC 60.891 55.000 0.00 0.00 40.89 4.85
396 397 0.877071 GTGACATGGACAGCAACCAG 59.123 55.000 0.00 0.00 40.89 4.00
397 398 0.182299 TGTGACATGGACAGCAACCA 59.818 50.000 0.00 0.00 41.83 3.67
398 399 0.593128 GTGTGACATGGACAGCAACC 59.407 55.000 0.00 0.00 0.00 3.77
399 400 0.235665 CGTGTGACATGGACAGCAAC 59.764 55.000 0.00 0.00 0.00 4.17
400 401 0.105778 TCGTGTGACATGGACAGCAA 59.894 50.000 4.78 0.00 0.00 3.91
401 402 0.319813 CTCGTGTGACATGGACAGCA 60.320 55.000 4.78 0.00 0.00 4.41
402 403 1.016130 CCTCGTGTGACATGGACAGC 61.016 60.000 4.78 0.00 0.00 4.40
403 404 0.603065 TCCTCGTGTGACATGGACAG 59.397 55.000 4.78 0.00 0.00 3.51
404 405 0.603065 CTCCTCGTGTGACATGGACA 59.397 55.000 4.78 0.00 0.00 4.02
405 406 0.603569 ACTCCTCGTGTGACATGGAC 59.396 55.000 4.78 0.00 0.00 4.02
406 407 0.603065 CACTCCTCGTGTGACATGGA 59.397 55.000 4.78 5.02 38.84 3.41
407 408 3.128259 CACTCCTCGTGTGACATGG 57.872 57.895 4.78 0.60 38.84 3.66
416 417 1.227556 GTTGTGCCACACTCCTCGT 60.228 57.895 0.00 0.00 35.11 4.18
417 418 0.317160 TAGTTGTGCCACACTCCTCG 59.683 55.000 0.00 0.00 35.11 4.63
418 419 1.608283 GGTAGTTGTGCCACACTCCTC 60.608 57.143 0.00 0.00 35.11 3.71
419 420 0.396811 GGTAGTTGTGCCACACTCCT 59.603 55.000 0.00 0.00 35.11 3.69
420 421 0.605589 GGGTAGTTGTGCCACACTCC 60.606 60.000 0.00 0.00 35.11 3.85
421 422 0.949105 CGGGTAGTTGTGCCACACTC 60.949 60.000 0.00 0.00 35.11 3.51
422 423 1.070786 CGGGTAGTTGTGCCACACT 59.929 57.895 0.00 0.95 35.11 3.55
423 424 0.321298 ATCGGGTAGTTGTGCCACAC 60.321 55.000 0.00 0.00 34.56 3.82
424 425 1.066716 GTATCGGGTAGTTGTGCCACA 60.067 52.381 0.00 0.00 0.00 4.17
425 426 1.066716 TGTATCGGGTAGTTGTGCCAC 60.067 52.381 0.00 0.00 0.00 5.01
426 427 1.066716 GTGTATCGGGTAGTTGTGCCA 60.067 52.381 0.00 0.00 0.00 4.92
427 428 1.648504 GTGTATCGGGTAGTTGTGCC 58.351 55.000 0.00 0.00 0.00 5.01
428 429 1.066716 TGGTGTATCGGGTAGTTGTGC 60.067 52.381 0.00 0.00 0.00 4.57
429 430 2.028839 TGTGGTGTATCGGGTAGTTGTG 60.029 50.000 0.00 0.00 0.00 3.33
430 431 2.028748 GTGTGGTGTATCGGGTAGTTGT 60.029 50.000 0.00 0.00 0.00 3.32
431 432 2.613691 GTGTGGTGTATCGGGTAGTTG 58.386 52.381 0.00 0.00 0.00 3.16
432 433 1.203052 CGTGTGGTGTATCGGGTAGTT 59.797 52.381 0.00 0.00 0.00 2.24
433 434 0.813184 CGTGTGGTGTATCGGGTAGT 59.187 55.000 0.00 0.00 0.00 2.73
434 435 0.813184 ACGTGTGGTGTATCGGGTAG 59.187 55.000 0.00 0.00 0.00 3.18
435 436 0.527113 CACGTGTGGTGTATCGGGTA 59.473 55.000 7.58 0.00 41.89 3.69
436 437 1.290955 CACGTGTGGTGTATCGGGT 59.709 57.895 7.58 0.00 41.89 5.28
437 438 4.178861 CACGTGTGGTGTATCGGG 57.821 61.111 7.58 0.00 41.89 5.14
447 448 0.438445 CGATAACTGCCACACGTGTG 59.562 55.000 36.13 36.13 45.23 3.82
448 449 0.669318 CCGATAACTGCCACACGTGT 60.669 55.000 17.22 17.22 0.00 4.49
449 450 1.358725 CCCGATAACTGCCACACGTG 61.359 60.000 15.48 15.48 0.00 4.49
450 451 1.079405 CCCGATAACTGCCACACGT 60.079 57.895 0.00 0.00 0.00 4.49
451 452 1.082117 GTCCCGATAACTGCCACACG 61.082 60.000 0.00 0.00 0.00 4.49
452 453 0.743345 GGTCCCGATAACTGCCACAC 60.743 60.000 0.00 0.00 0.00 3.82
453 454 1.600107 GGTCCCGATAACTGCCACA 59.400 57.895 0.00 0.00 0.00 4.17
454 455 1.153229 GGGTCCCGATAACTGCCAC 60.153 63.158 0.00 0.00 0.00 5.01
455 456 0.031917 TAGGGTCCCGATAACTGCCA 60.032 55.000 0.99 0.00 0.00 4.92
456 457 1.125633 TTAGGGTCCCGATAACTGCC 58.874 55.000 0.99 0.00 0.00 4.85
457 458 2.994186 TTTAGGGTCCCGATAACTGC 57.006 50.000 0.99 0.00 0.00 4.40
477 478 9.855021 CAACAAATCGAAGGGAGTAAATATTTT 57.145 29.630 5.91 0.00 0.00 1.82
478 479 7.973944 GCAACAAATCGAAGGGAGTAAATATTT 59.026 33.333 5.89 5.89 0.00 1.40
479 480 7.339466 AGCAACAAATCGAAGGGAGTAAATATT 59.661 33.333 0.00 0.00 0.00 1.28
480 481 6.828785 AGCAACAAATCGAAGGGAGTAAATAT 59.171 34.615 0.00 0.00 0.00 1.28
481 482 6.093495 CAGCAACAAATCGAAGGGAGTAAATA 59.907 38.462 0.00 0.00 0.00 1.40
482 483 5.010282 AGCAACAAATCGAAGGGAGTAAAT 58.990 37.500 0.00 0.00 0.00 1.40
483 484 4.215399 CAGCAACAAATCGAAGGGAGTAAA 59.785 41.667 0.00 0.00 0.00 2.01
484 485 3.751175 CAGCAACAAATCGAAGGGAGTAA 59.249 43.478 0.00 0.00 0.00 2.24
485 486 3.007506 TCAGCAACAAATCGAAGGGAGTA 59.992 43.478 0.00 0.00 0.00 2.59
486 487 2.154462 CAGCAACAAATCGAAGGGAGT 58.846 47.619 0.00 0.00 0.00 3.85
487 488 2.160417 GTCAGCAACAAATCGAAGGGAG 59.840 50.000 0.00 0.00 0.00 4.30
488 489 2.151202 GTCAGCAACAAATCGAAGGGA 58.849 47.619 0.00 0.00 0.00 4.20
489 490 2.154462 AGTCAGCAACAAATCGAAGGG 58.846 47.619 0.00 0.00 0.00 3.95
490 491 3.904136 AAGTCAGCAACAAATCGAAGG 57.096 42.857 0.00 0.00 0.00 3.46
491 492 5.597813 ACTAAGTCAGCAACAAATCGAAG 57.402 39.130 0.00 0.00 0.00 3.79
492 493 5.986741 TGTACTAAGTCAGCAACAAATCGAA 59.013 36.000 0.00 0.00 0.00 3.71
493 494 5.534407 TGTACTAAGTCAGCAACAAATCGA 58.466 37.500 0.00 0.00 0.00 3.59
494 495 5.839262 TGTACTAAGTCAGCAACAAATCG 57.161 39.130 0.00 0.00 0.00 3.34
523 524 9.269453 GGTAAACTAATACTCGCTTTTATCCAT 57.731 33.333 0.00 0.00 0.00 3.41
524 525 8.259411 TGGTAAACTAATACTCGCTTTTATCCA 58.741 33.333 0.00 0.00 0.00 3.41
525 526 8.546244 GTGGTAAACTAATACTCGCTTTTATCC 58.454 37.037 0.00 0.00 0.00 2.59
526 527 9.090692 TGTGGTAAACTAATACTCGCTTTTATC 57.909 33.333 0.00 0.00 0.00 1.75
527 528 9.439500 TTGTGGTAAACTAATACTCGCTTTTAT 57.561 29.630 0.00 0.00 0.00 1.40
528 529 8.830201 TTGTGGTAAACTAATACTCGCTTTTA 57.170 30.769 0.00 0.00 0.00 1.52
529 530 7.658575 TCTTGTGGTAAACTAATACTCGCTTTT 59.341 33.333 0.00 0.00 0.00 2.27
530 531 7.156673 TCTTGTGGTAAACTAATACTCGCTTT 58.843 34.615 0.00 0.00 0.00 3.51
531 532 6.694447 TCTTGTGGTAAACTAATACTCGCTT 58.306 36.000 0.00 0.00 0.00 4.68
532 533 6.276832 TCTTGTGGTAAACTAATACTCGCT 57.723 37.500 0.00 0.00 0.00 4.93
533 534 6.956299 TTCTTGTGGTAAACTAATACTCGC 57.044 37.500 0.00 0.00 0.00 5.03
534 535 7.064134 TGCATTCTTGTGGTAAACTAATACTCG 59.936 37.037 0.00 0.00 0.00 4.18
535 536 8.263940 TGCATTCTTGTGGTAAACTAATACTC 57.736 34.615 0.00 0.00 0.00 2.59
536 537 8.630054 TTGCATTCTTGTGGTAAACTAATACT 57.370 30.769 0.00 0.00 0.00 2.12
537 538 9.289303 CATTGCATTCTTGTGGTAAACTAATAC 57.711 33.333 0.00 0.00 0.00 1.89
538 539 9.237187 TCATTGCATTCTTGTGGTAAACTAATA 57.763 29.630 0.00 0.00 0.00 0.98
539 540 8.121305 TCATTGCATTCTTGTGGTAAACTAAT 57.879 30.769 0.00 0.00 0.00 1.73
540 541 7.230510 ACTCATTGCATTCTTGTGGTAAACTAA 59.769 33.333 0.00 0.00 0.00 2.24
541 542 6.714810 ACTCATTGCATTCTTGTGGTAAACTA 59.285 34.615 0.00 0.00 0.00 2.24
542 543 5.536161 ACTCATTGCATTCTTGTGGTAAACT 59.464 36.000 0.00 0.00 0.00 2.66
543 544 5.772521 ACTCATTGCATTCTTGTGGTAAAC 58.227 37.500 0.00 0.00 0.00 2.01
544 545 6.215121 CAACTCATTGCATTCTTGTGGTAAA 58.785 36.000 0.00 0.00 0.00 2.01
545 546 5.771469 CAACTCATTGCATTCTTGTGGTAA 58.229 37.500 0.00 0.00 0.00 2.85
546 547 5.375417 CAACTCATTGCATTCTTGTGGTA 57.625 39.130 0.00 0.00 0.00 3.25
547 548 4.247267 CAACTCATTGCATTCTTGTGGT 57.753 40.909 0.00 0.00 0.00 4.16
559 560 2.601314 CGCCATCAAATGCAACTCATTG 59.399 45.455 0.00 0.00 44.23 2.82
560 561 2.492881 TCGCCATCAAATGCAACTCATT 59.507 40.909 0.00 0.00 46.82 2.57
561 562 2.093890 TCGCCATCAAATGCAACTCAT 58.906 42.857 0.00 0.00 36.87 2.90
562 563 1.532523 TCGCCATCAAATGCAACTCA 58.467 45.000 0.00 0.00 0.00 3.41
563 564 2.634982 TTCGCCATCAAATGCAACTC 57.365 45.000 0.00 0.00 0.00 3.01
564 565 3.598019 ATTTCGCCATCAAATGCAACT 57.402 38.095 0.00 0.00 0.00 3.16
565 566 5.331756 CGATTATTTCGCCATCAAATGCAAC 60.332 40.000 0.00 0.00 41.69 4.17
566 567 4.739228 CGATTATTTCGCCATCAAATGCAA 59.261 37.500 0.00 0.00 41.69 4.08
567 568 4.289342 CGATTATTTCGCCATCAAATGCA 58.711 39.130 0.00 0.00 41.69 3.96
568 569 4.873789 CGATTATTTCGCCATCAAATGC 57.126 40.909 0.00 0.00 41.69 3.56
580 581 4.365899 AAAAAGGCCGGTCGATTATTTC 57.634 40.909 1.90 0.00 0.00 2.17
598 599 6.380095 ACAACCGTCTGCTTGTTATAAAAA 57.620 33.333 0.00 0.00 0.00 1.94
599 600 6.183360 ACAACAACCGTCTGCTTGTTATAAAA 60.183 34.615 0.00 0.00 38.30 1.52
600 601 5.297278 ACAACAACCGTCTGCTTGTTATAAA 59.703 36.000 0.00 0.00 38.30 1.40
601 602 4.817464 ACAACAACCGTCTGCTTGTTATAA 59.183 37.500 0.00 0.00 38.30 0.98
602 603 4.382291 ACAACAACCGTCTGCTTGTTATA 58.618 39.130 0.00 0.00 38.30 0.98
603 604 3.211045 ACAACAACCGTCTGCTTGTTAT 58.789 40.909 0.00 0.00 38.30 1.89
604 605 2.634600 ACAACAACCGTCTGCTTGTTA 58.365 42.857 0.00 0.00 38.30 2.41
605 606 1.459450 ACAACAACCGTCTGCTTGTT 58.541 45.000 0.00 0.00 40.47 2.83
606 607 1.132262 CAACAACAACCGTCTGCTTGT 59.868 47.619 0.00 0.00 31.76 3.16
607 608 1.132262 ACAACAACAACCGTCTGCTTG 59.868 47.619 0.00 0.00 0.00 4.01
608 609 1.459450 ACAACAACAACCGTCTGCTT 58.541 45.000 0.00 0.00 0.00 3.91
609 610 1.132262 CAACAACAACAACCGTCTGCT 59.868 47.619 0.00 0.00 0.00 4.24
610 611 1.135517 ACAACAACAACAACCGTCTGC 60.136 47.619 0.00 0.00 0.00 4.26
611 612 2.911819 ACAACAACAACAACCGTCTG 57.088 45.000 0.00 0.00 0.00 3.51
612 613 2.554893 ACAACAACAACAACAACCGTCT 59.445 40.909 0.00 0.00 0.00 4.18
613 614 2.936316 ACAACAACAACAACAACCGTC 58.064 42.857 0.00 0.00 0.00 4.79
614 615 3.053455 CAACAACAACAACAACAACCGT 58.947 40.909 0.00 0.00 0.00 4.83
615 616 2.159907 GCAACAACAACAACAACAACCG 60.160 45.455 0.00 0.00 0.00 4.44
616 617 2.159907 CGCAACAACAACAACAACAACC 60.160 45.455 0.00 0.00 0.00 3.77
617 618 2.159907 CCGCAACAACAACAACAACAAC 60.160 45.455 0.00 0.00 0.00 3.32
618 619 2.061773 CCGCAACAACAACAACAACAA 58.938 42.857 0.00 0.00 0.00 2.83
619 620 1.670087 CCCGCAACAACAACAACAACA 60.670 47.619 0.00 0.00 0.00 3.33
620 621 0.995728 CCCGCAACAACAACAACAAC 59.004 50.000 0.00 0.00 0.00 3.32
621 622 0.603569 ACCCGCAACAACAACAACAA 59.396 45.000 0.00 0.00 0.00 2.83
622 623 0.109086 CACCCGCAACAACAACAACA 60.109 50.000 0.00 0.00 0.00 3.33
623 624 0.171455 TCACCCGCAACAACAACAAC 59.829 50.000 0.00 0.00 0.00 3.32
624 625 0.888619 TTCACCCGCAACAACAACAA 59.111 45.000 0.00 0.00 0.00 2.83
625 626 0.453793 CTTCACCCGCAACAACAACA 59.546 50.000 0.00 0.00 0.00 3.33
626 627 0.869880 GCTTCACCCGCAACAACAAC 60.870 55.000 0.00 0.00 0.00 3.32
627 628 1.315981 TGCTTCACCCGCAACAACAA 61.316 50.000 0.00 0.00 33.87 2.83
628 629 1.723608 CTGCTTCACCCGCAACAACA 61.724 55.000 0.00 0.00 36.88 3.33
629 630 1.008538 CTGCTTCACCCGCAACAAC 60.009 57.895 0.00 0.00 36.88 3.32
630 631 1.153066 TCTGCTTCACCCGCAACAA 60.153 52.632 0.00 0.00 36.88 2.83
631 632 1.891919 GTCTGCTTCACCCGCAACA 60.892 57.895 0.00 0.00 36.88 3.33
632 633 2.946762 GTCTGCTTCACCCGCAAC 59.053 61.111 0.00 0.00 36.88 4.17
633 634 2.449031 ATCGTCTGCTTCACCCGCAA 62.449 55.000 0.00 0.00 36.88 4.85
634 635 2.449031 AATCGTCTGCTTCACCCGCA 62.449 55.000 0.00 0.00 35.80 5.69
635 636 1.741770 AATCGTCTGCTTCACCCGC 60.742 57.895 0.00 0.00 0.00 6.13
636 637 0.670546 ACAATCGTCTGCTTCACCCG 60.671 55.000 0.00 0.00 0.00 5.28
637 638 1.464997 GAACAATCGTCTGCTTCACCC 59.535 52.381 0.00 0.00 0.00 4.61
638 639 2.143122 TGAACAATCGTCTGCTTCACC 58.857 47.619 0.00 0.00 0.00 4.02
639 640 3.878086 TTGAACAATCGTCTGCTTCAC 57.122 42.857 0.00 0.00 0.00 3.18
640 641 3.250762 CCTTTGAACAATCGTCTGCTTCA 59.749 43.478 0.00 0.00 0.00 3.02
641 642 3.251004 ACCTTTGAACAATCGTCTGCTTC 59.749 43.478 0.00 0.00 0.00 3.86
642 643 3.214328 ACCTTTGAACAATCGTCTGCTT 58.786 40.909 0.00 0.00 0.00 3.91
643 644 2.851195 ACCTTTGAACAATCGTCTGCT 58.149 42.857 0.00 0.00 0.00 4.24
644 645 4.742438 TTACCTTTGAACAATCGTCTGC 57.258 40.909 0.00 0.00 0.00 4.26
645 646 6.018262 TCACTTTACCTTTGAACAATCGTCTG 60.018 38.462 0.00 0.00 0.00 3.51
646 647 6.053005 TCACTTTACCTTTGAACAATCGTCT 58.947 36.000 0.00 0.00 0.00 4.18
647 648 6.295039 TCACTTTACCTTTGAACAATCGTC 57.705 37.500 0.00 0.00 0.00 4.20
648 649 6.687081 TTCACTTTACCTTTGAACAATCGT 57.313 33.333 0.00 0.00 0.00 3.73
649 650 7.414436 TCTTTCACTTTACCTTTGAACAATCG 58.586 34.615 0.00 0.00 0.00 3.34
650 651 9.237846 CTTCTTTCACTTTACCTTTGAACAATC 57.762 33.333 0.00 0.00 0.00 2.67
651 652 8.749354 ACTTCTTTCACTTTACCTTTGAACAAT 58.251 29.630 0.00 0.00 0.00 2.71
652 653 8.117813 ACTTCTTTCACTTTACCTTTGAACAA 57.882 30.769 0.00 0.00 0.00 2.83
653 654 7.696992 ACTTCTTTCACTTTACCTTTGAACA 57.303 32.000 0.00 0.00 0.00 3.18
654 655 8.027189 ACAACTTCTTTCACTTTACCTTTGAAC 58.973 33.333 0.00 0.00 0.00 3.18
655 656 8.026607 CACAACTTCTTTCACTTTACCTTTGAA 58.973 33.333 0.00 0.00 0.00 2.69
656 657 7.535139 CACAACTTCTTTCACTTTACCTTTGA 58.465 34.615 0.00 0.00 0.00 2.69
661 662 4.607955 GGCACAACTTCTTTCACTTTACC 58.392 43.478 0.00 0.00 0.00 2.85
669 670 3.964909 ACAAATCGGCACAACTTCTTTC 58.035 40.909 0.00 0.00 0.00 2.62
672 673 1.880027 GGACAAATCGGCACAACTTCT 59.120 47.619 0.00 0.00 0.00 2.85
681 682 1.734465 CTCAAGACTGGACAAATCGGC 59.266 52.381 0.00 0.00 0.00 5.54
691 692 4.261363 GGAACTTTCAAAGCTCAAGACTGG 60.261 45.833 3.01 0.00 0.00 4.00
692 693 4.336433 TGGAACTTTCAAAGCTCAAGACTG 59.664 41.667 3.01 0.00 0.00 3.51
699 700 3.437049 ACGCTATGGAACTTTCAAAGCTC 59.563 43.478 0.00 0.00 0.00 4.09
700 701 3.412386 ACGCTATGGAACTTTCAAAGCT 58.588 40.909 0.00 0.00 0.00 3.74
701 702 3.831715 ACGCTATGGAACTTTCAAAGC 57.168 42.857 0.00 0.00 0.00 3.51
719 720 3.060363 GGACGTATCTGCTTGTTGTAACG 59.940 47.826 0.00 0.00 35.38 3.18
723 726 2.671351 CGAGGACGTATCTGCTTGTTGT 60.671 50.000 0.00 0.00 34.56 3.32
727 730 0.249073 CCCGAGGACGTATCTGCTTG 60.249 60.000 0.00 0.00 37.88 4.01
730 733 2.027751 GCCCGAGGACGTATCTGC 59.972 66.667 0.00 0.00 37.88 4.26
746 749 1.204941 TCGCAAGAGAGGGTAAAGAGC 59.795 52.381 0.00 0.00 45.01 4.09
759 762 3.613910 TTGACAGATTCATCGTCGCAAGA 60.614 43.478 0.00 0.00 38.00 3.02
769 772 2.885135 TGTGCCCTTGACAGATTCAT 57.115 45.000 0.00 0.00 32.84 2.57
775 778 3.057315 CCTTAAACATGTGCCCTTGACAG 60.057 47.826 0.00 0.00 0.00 3.51
800 803 5.277825 TGATTATTTTTATCAAAGCCGCCG 58.722 37.500 0.00 0.00 0.00 6.46
819 822 2.747467 CGGATGAGTGCCCTGATTGATT 60.747 50.000 0.00 0.00 0.00 2.57
821 824 0.178767 CGGATGAGTGCCCTGATTGA 59.821 55.000 0.00 0.00 0.00 2.57
822 825 1.442526 GCGGATGAGTGCCCTGATTG 61.443 60.000 0.00 0.00 0.00 2.67
823 826 1.153086 GCGGATGAGTGCCCTGATT 60.153 57.895 0.00 0.00 0.00 2.57
824 827 0.760567 TAGCGGATGAGTGCCCTGAT 60.761 55.000 0.00 0.00 0.00 2.90
825 828 1.381191 TAGCGGATGAGTGCCCTGA 60.381 57.895 0.00 0.00 0.00 3.86
826 829 1.227380 GTAGCGGATGAGTGCCCTG 60.227 63.158 0.00 0.00 0.00 4.45
902 926 1.728971 CTAGTTCAAGAGTGGCAAGCG 59.271 52.381 0.00 0.00 0.00 4.68
916 940 2.275318 GGCAGATGTGTGCTCTAGTTC 58.725 52.381 2.07 0.00 43.45 3.01
970 994 2.035442 GCTCTCGGTTTGGTCTGGC 61.035 63.158 0.00 0.00 0.00 4.85
976 1000 3.041940 AACGCGCTCTCGGTTTGG 61.042 61.111 5.73 0.00 35.95 3.28
1355 1379 4.899239 CCAGATCCACCTCCGCGC 62.899 72.222 0.00 0.00 0.00 6.86
1629 1682 1.078848 GACCAGCTTGCTCGTCCAT 60.079 57.895 8.79 0.00 0.00 3.41
1821 1874 3.670203 GCCGTCGTAGTTGATTTTGATG 58.330 45.455 0.00 0.00 0.00 3.07
2163 2216 2.264005 TTTTAAAGTGCCGGAGCTCA 57.736 45.000 17.19 0.00 40.80 4.26
2207 2260 3.737559 AATCATCCTTGCTGTTACCCA 57.262 42.857 0.00 0.00 0.00 4.51
2277 2442 9.976511 CACTCGGAATGTAATCTTATTTAGGTA 57.023 33.333 0.00 0.00 0.00 3.08
2315 2480 9.844790 TTGAAGCACACATTTTGAGATAATTAG 57.155 29.630 0.00 0.00 0.00 1.73
2316 2481 9.624697 GTTGAAGCACACATTTTGAGATAATTA 57.375 29.630 0.00 0.00 0.00 1.40
2317 2482 8.362639 AGTTGAAGCACACATTTTGAGATAATT 58.637 29.630 0.00 0.00 0.00 1.40
2318 2483 7.889469 AGTTGAAGCACACATTTTGAGATAAT 58.111 30.769 0.00 0.00 0.00 1.28
2319 2484 7.275888 AGTTGAAGCACACATTTTGAGATAA 57.724 32.000 0.00 0.00 0.00 1.75
2358 2523 6.170506 TGAAGCTAGAAAATGTAACGACCAT 58.829 36.000 0.00 0.00 0.00 3.55
2361 2526 6.312918 TGGATGAAGCTAGAAAATGTAACGAC 59.687 38.462 0.00 0.00 0.00 4.34
2369 2534 8.474710 AATGCTAATGGATGAAGCTAGAAAAT 57.525 30.769 0.00 0.00 37.16 1.82
2373 2538 7.012704 GTCAAAATGCTAATGGATGAAGCTAGA 59.987 37.037 0.00 0.00 37.16 2.43
2407 2616 7.042797 AGTCACACTAAAATGCAATGAACTT 57.957 32.000 0.00 0.00 0.00 2.66
2409 2618 6.346040 GCAAGTCACACTAAAATGCAATGAAC 60.346 38.462 0.00 0.00 30.76 3.18
2411 2620 5.221880 GCAAGTCACACTAAAATGCAATGA 58.778 37.500 0.00 0.00 30.76 2.57
2431 2640 4.200874 TCTTAACCAGAAAAGTTCCGCAA 58.799 39.130 0.00 0.00 0.00 4.85
2541 2750 5.301551 ACCTCACACATTGCTGTAAAATTGA 59.698 36.000 0.00 0.00 33.14 2.57
2549 2758 4.826274 ACTATACCTCACACATTGCTGT 57.174 40.909 0.00 0.00 35.44 4.40
2582 2791 9.971922 GGTGTCAAGAGTACTTTAAACTTACTA 57.028 33.333 0.00 0.00 33.70 1.82
2583 2792 7.930325 GGGTGTCAAGAGTACTTTAAACTTACT 59.070 37.037 0.00 4.94 33.70 2.24
2628 2837 9.988350 CGTGTAGCATTCTTGTTCTTAAATTAT 57.012 29.630 0.00 0.00 0.00 1.28
2629 2838 9.210329 TCGTGTAGCATTCTTGTTCTTAAATTA 57.790 29.630 0.00 0.00 0.00 1.40
2630 2839 8.094798 TCGTGTAGCATTCTTGTTCTTAAATT 57.905 30.769 0.00 0.00 0.00 1.82
2631 2840 7.667043 TCGTGTAGCATTCTTGTTCTTAAAT 57.333 32.000 0.00 0.00 0.00 1.40
2632 2841 7.117241 CTCGTGTAGCATTCTTGTTCTTAAA 57.883 36.000 0.00 0.00 0.00 1.52
2633 2842 6.706055 CTCGTGTAGCATTCTTGTTCTTAA 57.294 37.500 0.00 0.00 0.00 1.85
2648 2857 1.333881 CGTAATCCTCCGCTCGTGTAG 60.334 57.143 0.00 0.00 0.00 2.74
2649 2858 0.659427 CGTAATCCTCCGCTCGTGTA 59.341 55.000 0.00 0.00 0.00 2.90
2650 2859 1.028330 TCGTAATCCTCCGCTCGTGT 61.028 55.000 0.00 0.00 0.00 4.49
2651 2860 0.099968 TTCGTAATCCTCCGCTCGTG 59.900 55.000 0.00 0.00 0.00 4.35
2652 2861 0.100146 GTTCGTAATCCTCCGCTCGT 59.900 55.000 0.00 0.00 0.00 4.18
2653 2862 0.099968 TGTTCGTAATCCTCCGCTCG 59.900 55.000 0.00 0.00 0.00 5.03
2654 2863 2.288961 TTGTTCGTAATCCTCCGCTC 57.711 50.000 0.00 0.00 0.00 5.03
2655 2864 2.754946 TTTGTTCGTAATCCTCCGCT 57.245 45.000 0.00 0.00 0.00 5.52
2656 2865 4.095610 CAATTTTGTTCGTAATCCTCCGC 58.904 43.478 0.00 0.00 0.00 5.54
2657 2866 5.121768 AGTCAATTTTGTTCGTAATCCTCCG 59.878 40.000 0.00 0.00 0.00 4.63
2658 2867 6.496338 AGTCAATTTTGTTCGTAATCCTCC 57.504 37.500 0.00 0.00 0.00 4.30
2659 2868 8.500773 TGTAAGTCAATTTTGTTCGTAATCCTC 58.499 33.333 0.00 0.00 0.00 3.71
2660 2869 8.385898 TGTAAGTCAATTTTGTTCGTAATCCT 57.614 30.769 0.00 0.00 0.00 3.24
2661 2870 8.898792 GTTGTAAGTCAATTTTGTTCGTAATCC 58.101 33.333 0.00 0.00 38.38 3.01
2662 2871 9.440784 TGTTGTAAGTCAATTTTGTTCGTAATC 57.559 29.630 0.00 0.00 38.38 1.75
2663 2872 9.228636 GTGTTGTAAGTCAATTTTGTTCGTAAT 57.771 29.630 0.00 0.00 38.38 1.89
2664 2873 8.452534 AGTGTTGTAAGTCAATTTTGTTCGTAA 58.547 29.630 0.00 0.00 38.38 3.18
2665 2874 7.976826 AGTGTTGTAAGTCAATTTTGTTCGTA 58.023 30.769 0.00 0.00 38.38 3.43
2666 2875 6.848451 AGTGTTGTAAGTCAATTTTGTTCGT 58.152 32.000 0.00 0.00 38.38 3.85
2667 2876 7.375017 GGTAGTGTTGTAAGTCAATTTTGTTCG 59.625 37.037 0.00 0.00 38.38 3.95
2668 2877 7.375017 CGGTAGTGTTGTAAGTCAATTTTGTTC 59.625 37.037 0.00 0.00 38.38 3.18
2669 2878 7.190871 CGGTAGTGTTGTAAGTCAATTTTGTT 58.809 34.615 0.00 0.00 38.38 2.83
2670 2879 6.238538 CCGGTAGTGTTGTAAGTCAATTTTGT 60.239 38.462 0.00 0.00 38.38 2.83
2671 2880 6.017770 TCCGGTAGTGTTGTAAGTCAATTTTG 60.018 38.462 0.00 0.00 38.38 2.44
2672 2881 6.056884 TCCGGTAGTGTTGTAAGTCAATTTT 58.943 36.000 0.00 0.00 38.38 1.82
2673 2882 5.613329 TCCGGTAGTGTTGTAAGTCAATTT 58.387 37.500 0.00 0.00 38.38 1.82
2674 2883 5.217978 TCCGGTAGTGTTGTAAGTCAATT 57.782 39.130 0.00 0.00 38.38 2.32
2675 2884 4.877378 TCCGGTAGTGTTGTAAGTCAAT 57.123 40.909 0.00 0.00 38.38 2.57
2676 2885 4.669206 TTCCGGTAGTGTTGTAAGTCAA 57.331 40.909 0.00 0.00 0.00 3.18
2677 2886 4.669206 TTTCCGGTAGTGTTGTAAGTCA 57.331 40.909 0.00 0.00 0.00 3.41
2678 2887 4.084900 CGTTTTCCGGTAGTGTTGTAAGTC 60.085 45.833 0.00 0.00 0.00 3.01
2679 2888 3.803778 CGTTTTCCGGTAGTGTTGTAAGT 59.196 43.478 0.00 0.00 0.00 2.24
2680 2889 4.379374 CGTTTTCCGGTAGTGTTGTAAG 57.621 45.455 0.00 0.00 0.00 2.34
2807 3016 2.717044 CCGTCGGCATAGGTCCACA 61.717 63.158 0.00 0.00 0.00 4.17
2860 3069 2.743060 TGCTGTCCGCATGTCTGT 59.257 55.556 0.00 0.00 45.47 3.41
2890 3099 1.035139 AGTTATACCGACGGCCGATT 58.965 50.000 35.90 11.07 41.76 3.34
2921 3130 3.387947 CTAGTCACGGGCGGGGTT 61.388 66.667 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.