Multiple sequence alignment - TraesCS1A01G307700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G307700 chr1A 100.000 8237 0 0 1 8237 499182893 499191129 0.000000e+00 15211.0
1 TraesCS1A01G307700 chr1A 93.750 192 10 2 4676 4866 499187383 499187573 3.760000e-73 287.0
2 TraesCS1A01G307700 chr1A 93.750 192 10 2 4491 4681 499187568 499187758 3.760000e-73 287.0
3 TraesCS1A01G307700 chr1A 90.000 100 9 1 4478 4576 171456456 171456555 2.410000e-25 128.0
4 TraesCS1A01G307700 chr1A 88.571 105 10 2 4478 4581 459273326 459273223 8.680000e-25 126.0
5 TraesCS1A01G307700 chr1B 95.305 3834 111 28 2170 5970 543011015 543014812 0.000000e+00 6019.0
6 TraesCS1A01G307700 chr1B 88.904 1478 101 30 696 2160 543009449 543010876 0.000000e+00 1762.0
7 TraesCS1A01G307700 chr1B 94.591 832 25 6 5982 6793 543014869 543015700 0.000000e+00 1269.0
8 TraesCS1A01G307700 chr1B 92.326 821 43 12 6738 7548 543015700 543016510 0.000000e+00 1149.0
9 TraesCS1A01G307700 chr1B 93.750 192 9 3 4676 4866 543013342 543013531 1.350000e-72 285.0
10 TraesCS1A01G307700 chr1B 92.708 192 7 4 4491 4681 543013526 543013711 3.790000e-68 270.0
11 TraesCS1A01G307700 chr1B 87.705 244 11 11 412 648 543008958 543009189 4.900000e-67 267.0
12 TraesCS1A01G307700 chr1B 88.083 193 14 5 7791 7976 543016617 543016807 3.870000e-53 220.0
13 TraesCS1A01G307700 chr1B 100.000 57 0 0 8126 8182 543016878 543016934 1.130000e-18 106.0
14 TraesCS1A01G307700 chr1B 91.525 59 5 0 2100 2158 543010897 543010955 1.910000e-11 82.4
15 TraesCS1A01G307700 chr1D 95.025 3859 103 36 2170 5968 403696393 403700222 0.000000e+00 5980.0
16 TraesCS1A01G307700 chr1D 94.614 1374 59 10 6057 7424 403700421 403701785 0.000000e+00 2113.0
17 TraesCS1A01G307700 chr1D 84.168 1478 107 61 744 2160 403694831 403696242 0.000000e+00 1315.0
18 TraesCS1A01G307700 chr1D 87.079 356 23 8 7853 8186 403703032 403703386 1.680000e-101 381.0
19 TraesCS1A01G307700 chr1D 94.792 192 8 2 4491 4681 403698933 403699123 1.740000e-76 298.0
20 TraesCS1A01G307700 chr1D 93.229 192 11 2 4676 4866 403698748 403698938 1.750000e-71 281.0
21 TraesCS1A01G307700 chr1D 91.765 85 6 1 5982 6066 403700277 403700360 5.220000e-22 117.0
22 TraesCS1A01G307700 chr1D 98.361 61 1 0 2100 2160 403696240 403696300 3.140000e-19 108.0
23 TraesCS1A01G307700 chr1D 85.185 81 9 2 4680 4758 222333638 222333717 6.850000e-11 80.5
24 TraesCS1A01G307700 chr3D 80.040 501 66 25 1158 1652 29411750 29412222 2.850000e-89 340.0
25 TraesCS1A01G307700 chrUn 83.668 349 49 5 1158 1502 135061289 135060945 1.030000e-83 322.0
26 TraesCS1A01G307700 chrUn 83.668 349 49 5 1158 1502 152657870 152657526 1.030000e-83 322.0
27 TraesCS1A01G307700 chrUn 83.523 352 50 5 1155 1502 204411338 204411685 1.030000e-83 322.0
28 TraesCS1A01G307700 chr6B 82.421 347 53 5 1160 1502 703262818 703263160 6.250000e-76 296.0
29 TraesCS1A01G307700 chr6B 93.182 44 2 1 7700 7743 188671115 188671073 6.900000e-06 63.9
30 TraesCS1A01G307700 chr7D 78.044 501 81 18 1158 1652 456139229 456139706 1.050000e-73 289.0
31 TraesCS1A01G307700 chr7D 90.909 99 8 1 4478 4575 197927103 197927005 1.870000e-26 132.0
32 TraesCS1A01G307700 chr3A 81.375 349 54 7 1158 1502 454040561 454040220 2.930000e-69 274.0
33 TraesCS1A01G307700 chr6A 90.816 98 7 2 4478 4574 599048825 599048729 6.710000e-26 130.0
34 TraesCS1A01G307700 chr4D 87.500 80 8 2 4680 4758 405052843 405052921 3.170000e-14 91.6
35 TraesCS1A01G307700 chr4D 100.000 32 0 0 7711 7742 92198057 92198026 8.930000e-05 60.2
36 TraesCS1A01G307700 chr5B 84.211 95 12 3 4679 4771 591640572 591640479 1.140000e-13 89.8
37 TraesCS1A01G307700 chr5A 89.041 73 7 1 4680 4751 556687456 556687528 1.140000e-13 89.8
38 TraesCS1A01G307700 chr5A 92.308 39 3 0 7705 7743 673934536 673934498 1.000000e-03 56.5
39 TraesCS1A01G307700 chr4A 100.000 31 0 0 7712 7742 667788141 667788171 3.210000e-04 58.4
40 TraesCS1A01G307700 chr4A 100.000 30 0 0 7713 7742 504200759 504200730 1.000000e-03 56.5
41 TraesCS1A01G307700 chr4A 100.000 30 0 0 7714 7743 734984401 734984430 1.000000e-03 56.5
42 TraesCS1A01G307700 chr2A 100.000 31 0 0 7712 7742 565081760 565081730 3.210000e-04 58.4
43 TraesCS1A01G307700 chr6D 92.500 40 2 1 7704 7743 103006068 103006030 1.000000e-03 56.5
44 TraesCS1A01G307700 chr2B 100.000 30 0 0 7714 7743 5597372 5597401 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G307700 chr1A 499182893 499191129 8236 False 5261.666667 15211 95.833333 1 8237 3 chr1A.!!$F2 8236
1 TraesCS1A01G307700 chr1B 543008958 543016934 7976 False 1142.940000 6019 92.489700 412 8182 10 chr1B.!!$F1 7770
2 TraesCS1A01G307700 chr1D 403694831 403703386 8555 False 1324.125000 5980 92.379125 744 8186 8 chr1D.!!$F2 7442


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.029567 ACAAATGTTTTTCGCGGCGA 59.970 45.0 22.69 22.69 0.00 5.54 F
438 439 0.038618 GGCCCGACAAAATTGACCAC 60.039 55.0 0.00 0.00 0.00 4.16 F
1183 1441 0.179124 CGGCGGAGAAGAGAAAGAGG 60.179 60.0 0.00 0.00 0.00 3.69 F
2075 2373 0.035439 AATAAGTGCACGTGAGGGGG 60.035 55.0 22.23 0.00 32.68 5.40 F
2168 2466 0.377203 CGCGGGAAAATCTAAGCCAC 59.623 55.0 0.00 0.00 0.00 5.01 F
2911 3382 0.685097 AGCACCAGGACATTGTACGT 59.315 50.0 0.00 0.00 0.00 3.57 F
2961 3433 1.586422 TGCTTTATCTGCTGATCCGC 58.414 50.0 9.62 11.06 34.32 5.54 F
4574 5105 2.305858 AGTGAACGGAGGGAGTACTT 57.694 50.0 0.00 0.00 0.00 2.24 F
6211 6859 1.021202 TGCTGTTATTGCATACCCGC 58.979 50.0 0.00 0.00 35.31 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2038 2336 0.098728 TTACCCGTTCGTAGTAGCGC 59.901 55.000 0.00 0.00 0.00 5.92 R
2061 2359 0.322187 AATTACCCCCTCACGTGCAC 60.322 55.000 11.67 6.82 0.00 4.57 R
2177 2639 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30 R
3746 4275 1.584308 GACGAGCTACAGTTTCATCGC 59.416 52.381 0.00 0.00 33.67 4.58 R
3886 4415 5.739752 TTGCAATGGTTTCTCGATCTATG 57.260 39.130 0.00 0.00 0.00 2.23 R
4746 5277 0.606604 TTCAACAGTACTCCCTCCGC 59.393 55.000 0.00 0.00 0.00 5.54 R
4795 5326 5.767168 AGTAGAGCATGCCTCAATTTTATCC 59.233 40.000 15.66 0.00 43.31 2.59 R
6295 6944 0.112995 AGGCATTGCTCCTTCCAACA 59.887 50.000 8.82 0.00 0.00 3.33 R
8103 9725 0.108472 GAGCCAGCCAATTTTCCTGC 60.108 55.000 0.00 0.00 0.00 4.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.850680 GTGACCATATACTGAAAACCCCA 58.149 43.478 0.00 0.00 0.00 4.96
23 24 5.445964 GTGACCATATACTGAAAACCCCAT 58.554 41.667 0.00 0.00 0.00 4.00
24 25 5.299279 GTGACCATATACTGAAAACCCCATG 59.701 44.000 0.00 0.00 0.00 3.66
25 26 5.044476 TGACCATATACTGAAAACCCCATGT 60.044 40.000 0.00 0.00 0.00 3.21
26 27 5.445964 ACCATATACTGAAAACCCCATGTC 58.554 41.667 0.00 0.00 0.00 3.06
27 28 4.827284 CCATATACTGAAAACCCCATGTCC 59.173 45.833 0.00 0.00 0.00 4.02
28 29 2.891191 TACTGAAAACCCCATGTCCC 57.109 50.000 0.00 0.00 0.00 4.46
29 30 0.114364 ACTGAAAACCCCATGTCCCC 59.886 55.000 0.00 0.00 0.00 4.81
30 31 0.114168 CTGAAAACCCCATGTCCCCA 59.886 55.000 0.00 0.00 0.00 4.96
31 32 0.789687 TGAAAACCCCATGTCCCCAT 59.210 50.000 0.00 0.00 0.00 4.00
32 33 1.272985 TGAAAACCCCATGTCCCCATC 60.273 52.381 0.00 0.00 0.00 3.51
33 34 0.789687 AAAACCCCATGTCCCCATCA 59.210 50.000 0.00 0.00 0.00 3.07
34 35 0.789687 AAACCCCATGTCCCCATCAA 59.210 50.000 0.00 0.00 0.00 2.57
35 36 1.018031 AACCCCATGTCCCCATCAAT 58.982 50.000 0.00 0.00 0.00 2.57
36 37 0.262580 ACCCCATGTCCCCATCAATG 59.737 55.000 0.00 0.00 0.00 2.82
37 38 1.117142 CCCCATGTCCCCATCAATGC 61.117 60.000 0.00 0.00 0.00 3.56
38 39 0.397394 CCCATGTCCCCATCAATGCA 60.397 55.000 0.00 0.00 0.00 3.96
39 40 1.037493 CCATGTCCCCATCAATGCAG 58.963 55.000 0.00 0.00 0.00 4.41
40 41 1.037493 CATGTCCCCATCAATGCAGG 58.963 55.000 0.00 0.00 0.00 4.85
41 42 0.105862 ATGTCCCCATCAATGCAGGG 60.106 55.000 0.84 0.84 42.44 4.45
42 43 1.213619 TGTCCCCATCAATGCAGGGA 61.214 55.000 9.52 7.29 46.54 4.20
43 44 2.407803 TCCCCATCAATGCAGGGAA 58.592 52.632 9.52 0.00 45.73 3.97
44 45 0.935942 TCCCCATCAATGCAGGGAAT 59.064 50.000 9.52 0.00 45.73 3.01
45 46 2.142756 TCCCCATCAATGCAGGGAATA 58.857 47.619 9.52 0.00 45.73 1.75
46 47 2.108776 TCCCCATCAATGCAGGGAATAG 59.891 50.000 9.52 0.00 45.73 1.73
47 48 1.891150 CCCATCAATGCAGGGAATAGC 59.109 52.381 1.63 0.00 45.80 2.97
48 49 2.589720 CCATCAATGCAGGGAATAGCA 58.410 47.619 0.00 0.00 45.92 3.49
49 50 2.295349 CCATCAATGCAGGGAATAGCAC 59.705 50.000 0.00 0.00 44.49 4.40
50 51 2.804986 TCAATGCAGGGAATAGCACA 57.195 45.000 0.00 0.00 44.49 4.57
51 52 2.368439 TCAATGCAGGGAATAGCACAC 58.632 47.619 0.00 0.00 44.49 3.82
52 53 2.093890 CAATGCAGGGAATAGCACACA 58.906 47.619 0.00 0.00 44.49 3.72
53 54 1.755179 ATGCAGGGAATAGCACACAC 58.245 50.000 0.00 0.00 44.49 3.82
54 55 0.399833 TGCAGGGAATAGCACACACA 59.600 50.000 0.00 0.00 35.51 3.72
55 56 1.004628 TGCAGGGAATAGCACACACAT 59.995 47.619 0.00 0.00 35.51 3.21
56 57 2.238395 TGCAGGGAATAGCACACACATA 59.762 45.455 0.00 0.00 35.51 2.29
57 58 3.278574 GCAGGGAATAGCACACACATAA 58.721 45.455 0.00 0.00 0.00 1.90
58 59 3.694072 GCAGGGAATAGCACACACATAAA 59.306 43.478 0.00 0.00 0.00 1.40
59 60 4.157656 GCAGGGAATAGCACACACATAAAA 59.842 41.667 0.00 0.00 0.00 1.52
60 61 5.163519 GCAGGGAATAGCACACACATAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
61 62 6.627953 GCAGGGAATAGCACACACATAAAATT 60.628 38.462 0.00 0.00 0.00 1.82
62 63 6.753279 CAGGGAATAGCACACACATAAAATTG 59.247 38.462 0.00 0.00 0.00 2.32
63 64 5.519927 GGGAATAGCACACACATAAAATTGC 59.480 40.000 0.00 0.00 0.00 3.56
64 65 6.098679 GGAATAGCACACACATAAAATTGCA 58.901 36.000 0.00 0.00 32.24 4.08
65 66 6.757947 GGAATAGCACACACATAAAATTGCAT 59.242 34.615 0.00 0.00 32.24 3.96
66 67 7.043192 GGAATAGCACACACATAAAATTGCATC 60.043 37.037 0.00 0.00 32.24 3.91
67 68 4.497300 AGCACACACATAAAATTGCATCC 58.503 39.130 0.00 0.00 32.24 3.51
68 69 3.304026 GCACACACATAAAATTGCATCCG 59.696 43.478 0.00 0.00 0.00 4.18
69 70 3.304026 CACACACATAAAATTGCATCCGC 59.696 43.478 0.00 0.00 39.24 5.54
84 85 2.358125 CGCACACGGACCCAATGA 60.358 61.111 0.00 0.00 34.97 2.57
85 86 1.745115 CGCACACGGACCCAATGAT 60.745 57.895 0.00 0.00 34.97 2.45
86 87 0.461163 CGCACACGGACCCAATGATA 60.461 55.000 0.00 0.00 34.97 2.15
87 88 1.810031 CGCACACGGACCCAATGATAT 60.810 52.381 0.00 0.00 34.97 1.63
88 89 1.603802 GCACACGGACCCAATGATATG 59.396 52.381 0.00 0.00 0.00 1.78
89 90 2.917933 CACACGGACCCAATGATATGT 58.082 47.619 0.00 0.00 0.00 2.29
90 91 3.278574 CACACGGACCCAATGATATGTT 58.721 45.455 0.00 0.00 0.00 2.71
91 92 3.694072 CACACGGACCCAATGATATGTTT 59.306 43.478 0.00 0.00 0.00 2.83
92 93 3.945285 ACACGGACCCAATGATATGTTTC 59.055 43.478 0.00 0.00 0.00 2.78
93 94 3.315191 CACGGACCCAATGATATGTTTCC 59.685 47.826 0.00 0.00 0.00 3.13
94 95 2.548057 CGGACCCAATGATATGTTTCCG 59.452 50.000 0.00 0.00 36.85 4.30
95 96 3.742954 CGGACCCAATGATATGTTTCCGA 60.743 47.826 0.35 0.00 41.70 4.55
96 97 4.398319 GGACCCAATGATATGTTTCCGAT 58.602 43.478 0.00 0.00 0.00 4.18
97 98 5.556915 GGACCCAATGATATGTTTCCGATA 58.443 41.667 0.00 0.00 0.00 2.92
98 99 6.001460 GGACCCAATGATATGTTTCCGATAA 58.999 40.000 0.00 0.00 0.00 1.75
99 100 6.659242 GGACCCAATGATATGTTTCCGATAAT 59.341 38.462 0.00 0.00 0.00 1.28
100 101 7.362056 GGACCCAATGATATGTTTCCGATAATG 60.362 40.741 0.00 0.00 0.00 1.90
101 102 6.071952 ACCCAATGATATGTTTCCGATAATGC 60.072 38.462 0.00 0.00 0.00 3.56
102 103 6.151648 CCCAATGATATGTTTCCGATAATGCT 59.848 38.462 0.00 0.00 0.00 3.79
103 104 7.336679 CCCAATGATATGTTTCCGATAATGCTA 59.663 37.037 0.00 0.00 0.00 3.49
104 105 8.177663 CCAATGATATGTTTCCGATAATGCTAC 58.822 37.037 0.00 0.00 0.00 3.58
105 106 7.849804 ATGATATGTTTCCGATAATGCTACC 57.150 36.000 0.00 0.00 0.00 3.18
106 107 6.170506 TGATATGTTTCCGATAATGCTACCC 58.829 40.000 0.00 0.00 0.00 3.69
107 108 3.916359 TGTTTCCGATAATGCTACCCA 57.084 42.857 0.00 0.00 0.00 4.51
108 109 3.804036 TGTTTCCGATAATGCTACCCAG 58.196 45.455 0.00 0.00 0.00 4.45
125 126 3.793144 GCGAACGCTTGCTGGAGG 61.793 66.667 11.97 0.00 38.26 4.30
126 127 2.357517 CGAACGCTTGCTGGAGGT 60.358 61.111 0.00 0.00 0.00 3.85
127 128 2.671177 CGAACGCTTGCTGGAGGTG 61.671 63.158 0.00 0.00 0.00 4.00
128 129 2.970974 GAACGCTTGCTGGAGGTGC 61.971 63.158 0.00 0.00 0.00 5.01
129 130 3.772853 AACGCTTGCTGGAGGTGCA 62.773 57.895 0.00 0.00 38.80 4.57
130 131 2.749044 CGCTTGCTGGAGGTGCAT 60.749 61.111 0.00 0.00 40.34 3.96
131 132 2.882876 GCTTGCTGGAGGTGCATG 59.117 61.111 0.00 0.00 40.34 4.06
132 133 2.707849 GCTTGCTGGAGGTGCATGG 61.708 63.158 0.00 0.00 40.34 3.66
133 134 1.303888 CTTGCTGGAGGTGCATGGT 60.304 57.895 0.00 0.00 40.34 3.55
134 135 0.035152 CTTGCTGGAGGTGCATGGTA 60.035 55.000 0.00 0.00 40.34 3.25
135 136 0.403655 TTGCTGGAGGTGCATGGTAA 59.596 50.000 0.00 0.00 40.34 2.85
136 137 0.403655 TGCTGGAGGTGCATGGTAAA 59.596 50.000 0.00 0.00 35.31 2.01
137 138 1.202989 TGCTGGAGGTGCATGGTAAAA 60.203 47.619 0.00 0.00 35.31 1.52
138 139 1.892474 GCTGGAGGTGCATGGTAAAAA 59.108 47.619 0.00 0.00 0.00 1.94
139 140 2.352715 GCTGGAGGTGCATGGTAAAAAC 60.353 50.000 0.00 0.00 0.00 2.43
140 141 2.890311 CTGGAGGTGCATGGTAAAAACA 59.110 45.455 0.00 0.00 0.00 2.83
141 142 3.300388 TGGAGGTGCATGGTAAAAACAA 58.700 40.909 0.00 0.00 0.00 2.83
142 143 3.706594 TGGAGGTGCATGGTAAAAACAAA 59.293 39.130 0.00 0.00 0.00 2.83
143 144 4.346418 TGGAGGTGCATGGTAAAAACAAAT 59.654 37.500 0.00 0.00 0.00 2.32
144 145 4.690280 GGAGGTGCATGGTAAAAACAAATG 59.310 41.667 0.00 0.00 0.00 2.32
145 146 5.289083 AGGTGCATGGTAAAAACAAATGT 57.711 34.783 0.00 0.00 0.00 2.71
146 147 5.679601 AGGTGCATGGTAAAAACAAATGTT 58.320 33.333 0.00 0.00 40.50 2.71
156 157 0.849579 AACAAATGTTTTTCGCGGCG 59.150 45.000 17.70 17.70 33.93 6.46
157 158 0.029567 ACAAATGTTTTTCGCGGCGA 59.970 45.000 22.69 22.69 0.00 5.54
158 159 1.335506 ACAAATGTTTTTCGCGGCGAT 60.336 42.857 26.95 7.04 35.23 4.58
159 160 1.718711 CAAATGTTTTTCGCGGCGATT 59.281 42.857 26.95 13.30 35.23 3.34
160 161 2.058913 AATGTTTTTCGCGGCGATTT 57.941 40.000 26.95 10.09 35.23 2.17
161 162 2.904011 ATGTTTTTCGCGGCGATTTA 57.096 40.000 26.95 8.73 35.23 1.40
162 163 1.953113 TGTTTTTCGCGGCGATTTAC 58.047 45.000 26.95 21.60 35.23 2.01
163 164 0.895958 GTTTTTCGCGGCGATTTACG 59.104 50.000 26.95 3.85 45.66 3.18
164 165 0.512085 TTTTTCGCGGCGATTTACGT 59.488 45.000 26.95 0.00 44.60 3.57
165 166 0.512085 TTTTCGCGGCGATTTACGTT 59.488 45.000 26.95 0.00 44.60 3.99
166 167 0.179245 TTTCGCGGCGATTTACGTTG 60.179 50.000 26.95 0.00 44.60 4.10
167 168 2.551472 TTCGCGGCGATTTACGTTGC 62.551 55.000 26.95 0.00 44.60 4.17
168 169 2.782615 GCGGCGATTTACGTTGCT 59.217 55.556 12.98 0.00 44.60 3.91
169 170 1.580132 GCGGCGATTTACGTTGCTG 60.580 57.895 12.98 0.00 44.60 4.41
170 171 1.580132 CGGCGATTTACGTTGCTGC 60.580 57.895 0.00 0.00 44.60 5.25
171 172 1.499949 GGCGATTTACGTTGCTGCA 59.500 52.632 0.00 0.00 44.60 4.41
172 173 0.521242 GGCGATTTACGTTGCTGCAG 60.521 55.000 10.11 10.11 44.60 4.41
173 174 0.521242 GCGATTTACGTTGCTGCAGG 60.521 55.000 17.12 0.31 44.60 4.85
174 175 1.075542 CGATTTACGTTGCTGCAGGA 58.924 50.000 17.12 10.66 37.22 3.86
175 176 1.061131 CGATTTACGTTGCTGCAGGAG 59.939 52.381 17.12 4.17 37.22 3.69
176 177 4.666975 CGATTTACGTTGCTGCAGGAGC 62.667 54.545 17.12 14.49 41.76 4.70
187 188 2.315246 GCAGGAGCATGACGATTCC 58.685 57.895 0.00 0.00 41.58 3.01
188 189 0.179062 GCAGGAGCATGACGATTCCT 60.179 55.000 0.00 0.00 40.63 3.36
189 190 1.745141 GCAGGAGCATGACGATTCCTT 60.745 52.381 0.00 0.00 37.97 3.36
190 191 2.208431 CAGGAGCATGACGATTCCTTC 58.792 52.381 0.00 0.00 37.97 3.46
191 192 1.833630 AGGAGCATGACGATTCCTTCA 59.166 47.619 0.00 0.00 36.69 3.02
192 193 2.237143 AGGAGCATGACGATTCCTTCAA 59.763 45.455 0.00 0.00 36.69 2.69
193 194 2.611292 GGAGCATGACGATTCCTTCAAG 59.389 50.000 0.00 0.00 0.00 3.02
194 195 2.012673 AGCATGACGATTCCTTCAAGC 58.987 47.619 0.00 3.20 36.09 4.01
195 196 1.739466 GCATGACGATTCCTTCAAGCA 59.261 47.619 0.00 0.00 35.96 3.91
196 197 2.162208 GCATGACGATTCCTTCAAGCAA 59.838 45.455 0.00 0.00 35.96 3.91
197 198 3.366273 GCATGACGATTCCTTCAAGCAAA 60.366 43.478 0.00 0.00 35.96 3.68
198 199 3.896648 TGACGATTCCTTCAAGCAAAC 57.103 42.857 0.00 0.00 0.00 2.93
199 200 3.210227 TGACGATTCCTTCAAGCAAACA 58.790 40.909 0.00 0.00 0.00 2.83
200 201 3.003275 TGACGATTCCTTCAAGCAAACAC 59.997 43.478 0.00 0.00 0.00 3.32
201 202 2.032030 ACGATTCCTTCAAGCAAACACG 60.032 45.455 0.00 0.00 0.00 4.49
202 203 2.665519 CGATTCCTTCAAGCAAACACGG 60.666 50.000 0.00 0.00 0.00 4.94
203 204 0.383949 TTCCTTCAAGCAAACACGGC 59.616 50.000 0.00 0.00 0.00 5.68
204 205 1.370414 CCTTCAAGCAAACACGGCG 60.370 57.895 4.80 4.80 36.08 6.46
205 206 1.646540 CTTCAAGCAAACACGGCGA 59.353 52.632 16.62 0.00 36.08 5.54
206 207 0.238289 CTTCAAGCAAACACGGCGAT 59.762 50.000 16.62 0.00 36.08 4.58
207 208 0.665835 TTCAAGCAAACACGGCGATT 59.334 45.000 16.62 4.32 36.08 3.34
208 209 0.665835 TCAAGCAAACACGGCGATTT 59.334 45.000 16.62 11.14 36.08 2.17
209 210 1.066303 TCAAGCAAACACGGCGATTTT 59.934 42.857 16.62 9.40 36.08 1.82
210 211 1.857837 CAAGCAAACACGGCGATTTTT 59.142 42.857 16.62 6.61 36.08 1.94
211 212 1.766069 AGCAAACACGGCGATTTTTC 58.234 45.000 16.62 6.71 36.08 2.29
212 213 1.066303 AGCAAACACGGCGATTTTTCA 59.934 42.857 16.62 0.00 36.08 2.69
213 214 1.189227 GCAAACACGGCGATTTTTCAC 59.811 47.619 16.62 0.76 0.00 3.18
214 215 1.446465 CAAACACGGCGATTTTTCACG 59.554 47.619 16.62 0.00 0.00 4.35
215 216 0.040781 AACACGGCGATTTTTCACGG 60.041 50.000 16.62 0.00 0.00 4.94
223 224 4.225815 GCGATTTTTCACGGCATAAAAC 57.774 40.909 0.00 0.00 0.00 2.43
224 225 3.060230 GCGATTTTTCACGGCATAAAACC 59.940 43.478 0.00 0.00 0.00 3.27
225 226 3.610677 CGATTTTTCACGGCATAAAACCC 59.389 43.478 0.00 0.00 0.00 4.11
226 227 4.617298 CGATTTTTCACGGCATAAAACCCT 60.617 41.667 0.00 0.00 0.00 4.34
227 228 4.674281 TTTTTCACGGCATAAAACCCTT 57.326 36.364 0.00 0.00 0.00 3.95
228 229 4.674281 TTTTCACGGCATAAAACCCTTT 57.326 36.364 0.00 0.00 0.00 3.11
229 230 3.926821 TTCACGGCATAAAACCCTTTC 57.073 42.857 0.00 0.00 0.00 2.62
230 231 2.164338 TCACGGCATAAAACCCTTTCC 58.836 47.619 0.00 0.00 0.00 3.13
231 232 2.167662 CACGGCATAAAACCCTTTCCT 58.832 47.619 0.00 0.00 0.00 3.36
232 233 2.163613 CACGGCATAAAACCCTTTCCTC 59.836 50.000 0.00 0.00 0.00 3.71
233 234 1.749063 CGGCATAAAACCCTTTCCTCC 59.251 52.381 0.00 0.00 0.00 4.30
234 235 2.108168 GGCATAAAACCCTTTCCTCCC 58.892 52.381 0.00 0.00 0.00 4.30
235 236 2.558800 GGCATAAAACCCTTTCCTCCCA 60.559 50.000 0.00 0.00 0.00 4.37
236 237 2.760650 GCATAAAACCCTTTCCTCCCAG 59.239 50.000 0.00 0.00 0.00 4.45
237 238 3.563479 GCATAAAACCCTTTCCTCCCAGA 60.563 47.826 0.00 0.00 0.00 3.86
238 239 4.672899 CATAAAACCCTTTCCTCCCAGAA 58.327 43.478 0.00 0.00 0.00 3.02
239 240 3.699025 AAAACCCTTTCCTCCCAGAAA 57.301 42.857 0.00 0.00 34.64 2.52
240 241 2.677542 AACCCTTTCCTCCCAGAAAC 57.322 50.000 0.00 0.00 32.45 2.78
241 242 1.834540 ACCCTTTCCTCCCAGAAACT 58.165 50.000 0.00 0.00 32.45 2.66
242 243 1.425448 ACCCTTTCCTCCCAGAAACTG 59.575 52.381 0.00 0.00 32.45 3.16
243 244 1.539157 CCTTTCCTCCCAGAAACTGC 58.461 55.000 0.00 0.00 32.45 4.40
244 245 1.202927 CCTTTCCTCCCAGAAACTGCA 60.203 52.381 0.00 0.00 32.45 4.41
245 246 2.556114 CCTTTCCTCCCAGAAACTGCAT 60.556 50.000 0.00 0.00 32.45 3.96
246 247 2.978156 TTCCTCCCAGAAACTGCATT 57.022 45.000 0.00 0.00 0.00 3.56
247 248 2.205022 TCCTCCCAGAAACTGCATTG 57.795 50.000 0.00 0.00 0.00 2.82
248 249 1.425066 TCCTCCCAGAAACTGCATTGT 59.575 47.619 0.00 0.00 0.00 2.71
249 250 1.542915 CCTCCCAGAAACTGCATTGTG 59.457 52.381 0.00 0.00 0.00 3.33
250 251 2.233271 CTCCCAGAAACTGCATTGTGT 58.767 47.619 0.00 0.00 0.00 3.72
251 252 2.624838 CTCCCAGAAACTGCATTGTGTT 59.375 45.455 0.00 0.00 0.00 3.32
252 253 3.030291 TCCCAGAAACTGCATTGTGTTT 58.970 40.909 1.76 1.76 38.84 2.83
253 254 4.211125 TCCCAGAAACTGCATTGTGTTTA 58.789 39.130 2.14 0.00 36.64 2.01
254 255 4.037446 TCCCAGAAACTGCATTGTGTTTAC 59.963 41.667 2.14 0.00 36.64 2.01
255 256 3.974401 CCAGAAACTGCATTGTGTTTACG 59.026 43.478 2.14 0.00 36.64 3.18
256 257 4.260990 CCAGAAACTGCATTGTGTTTACGA 60.261 41.667 2.14 0.00 36.64 3.43
257 258 5.270083 CAGAAACTGCATTGTGTTTACGAA 58.730 37.500 2.14 0.00 36.64 3.85
258 259 5.396362 CAGAAACTGCATTGTGTTTACGAAG 59.604 40.000 2.14 0.00 36.64 3.79
259 260 5.295787 AGAAACTGCATTGTGTTTACGAAGA 59.704 36.000 2.14 0.00 36.64 2.87
260 261 5.493133 AACTGCATTGTGTTTACGAAGAA 57.507 34.783 0.00 0.00 0.00 2.52
261 262 5.493133 ACTGCATTGTGTTTACGAAGAAA 57.507 34.783 0.00 0.00 0.00 2.52
262 263 6.072112 ACTGCATTGTGTTTACGAAGAAAT 57.928 33.333 0.00 0.00 0.00 2.17
263 264 6.142817 ACTGCATTGTGTTTACGAAGAAATC 58.857 36.000 0.00 0.00 0.00 2.17
281 282 2.476947 GCCACGCGCGTTATGAAA 59.523 55.556 35.90 0.00 0.00 2.69
282 283 1.154376 GCCACGCGCGTTATGAAAA 60.154 52.632 35.90 0.00 0.00 2.29
283 284 0.726452 GCCACGCGCGTTATGAAAAA 60.726 50.000 35.90 0.00 0.00 1.94
304 305 5.856126 AAAGAATCATAAGAACGTTCGCA 57.144 34.783 21.87 14.16 0.00 5.10
305 306 5.456192 AAGAATCATAAGAACGTTCGCAG 57.544 39.130 21.87 13.39 0.00 5.18
306 307 4.744570 AGAATCATAAGAACGTTCGCAGA 58.255 39.130 21.87 17.72 0.00 4.26
307 308 5.352284 AGAATCATAAGAACGTTCGCAGAT 58.648 37.500 21.87 18.96 35.04 2.90
308 309 5.233050 AGAATCATAAGAACGTTCGCAGATG 59.767 40.000 21.87 20.57 35.04 2.90
309 310 3.186909 TCATAAGAACGTTCGCAGATGG 58.813 45.455 21.87 9.69 35.04 3.51
310 311 2.736144 TAAGAACGTTCGCAGATGGT 57.264 45.000 21.87 0.00 35.04 3.55
311 312 2.736144 AAGAACGTTCGCAGATGGTA 57.264 45.000 21.87 0.00 35.04 3.25
312 313 2.961526 AGAACGTTCGCAGATGGTAT 57.038 45.000 21.87 0.00 35.04 2.73
313 314 2.810650 AGAACGTTCGCAGATGGTATC 58.189 47.619 21.87 0.00 35.04 2.24
314 315 1.859080 GAACGTTCGCAGATGGTATCC 59.141 52.381 13.36 0.00 35.04 2.59
315 316 1.112113 ACGTTCGCAGATGGTATCCT 58.888 50.000 0.00 0.00 35.04 3.24
316 317 1.480954 ACGTTCGCAGATGGTATCCTT 59.519 47.619 0.00 0.00 35.04 3.36
317 318 2.128035 CGTTCGCAGATGGTATCCTTC 58.872 52.381 0.00 0.00 35.04 3.46
318 319 2.223829 CGTTCGCAGATGGTATCCTTCT 60.224 50.000 0.00 0.00 38.35 2.85
319 320 3.385577 GTTCGCAGATGGTATCCTTCTC 58.614 50.000 1.95 0.00 36.13 2.87
320 321 2.666317 TCGCAGATGGTATCCTTCTCA 58.334 47.619 1.95 0.00 36.13 3.27
321 322 2.625314 TCGCAGATGGTATCCTTCTCAG 59.375 50.000 1.95 0.89 36.13 3.35
322 323 2.363680 CGCAGATGGTATCCTTCTCAGT 59.636 50.000 1.95 0.00 36.13 3.41
323 324 3.726607 GCAGATGGTATCCTTCTCAGTG 58.273 50.000 1.95 0.00 36.13 3.66
324 325 3.386078 GCAGATGGTATCCTTCTCAGTGA 59.614 47.826 0.00 0.00 36.13 3.41
325 326 4.141846 GCAGATGGTATCCTTCTCAGTGAA 60.142 45.833 0.00 0.00 36.13 3.18
326 327 5.355596 CAGATGGTATCCTTCTCAGTGAAC 58.644 45.833 0.00 0.00 36.13 3.18
327 328 5.026121 AGATGGTATCCTTCTCAGTGAACA 58.974 41.667 0.00 0.00 33.54 3.18
328 329 5.664908 AGATGGTATCCTTCTCAGTGAACAT 59.335 40.000 0.00 0.00 33.54 2.71
329 330 5.762179 TGGTATCCTTCTCAGTGAACATT 57.238 39.130 0.00 0.00 0.00 2.71
330 331 5.734720 TGGTATCCTTCTCAGTGAACATTC 58.265 41.667 0.00 0.00 0.00 2.67
331 332 5.119694 GGTATCCTTCTCAGTGAACATTCC 58.880 45.833 0.00 0.00 0.00 3.01
332 333 4.916041 ATCCTTCTCAGTGAACATTCCA 57.084 40.909 0.00 0.00 0.00 3.53
333 334 4.008074 TCCTTCTCAGTGAACATTCCAC 57.992 45.455 0.00 0.00 34.89 4.02
334 335 3.648067 TCCTTCTCAGTGAACATTCCACT 59.352 43.478 0.00 0.00 44.92 4.00
339 340 1.901591 AGTGAACATTCCACTGGCTG 58.098 50.000 0.00 0.00 42.68 4.85
340 341 0.242017 GTGAACATTCCACTGGCTGC 59.758 55.000 0.00 0.00 0.00 5.25
341 342 0.111061 TGAACATTCCACTGGCTGCT 59.889 50.000 0.00 0.00 0.00 4.24
342 343 0.524862 GAACATTCCACTGGCTGCTG 59.475 55.000 0.00 0.00 0.00 4.41
343 344 1.530013 AACATTCCACTGGCTGCTGC 61.530 55.000 7.10 7.10 38.76 5.25
344 345 2.749044 ATTCCACTGGCTGCTGCG 60.749 61.111 9.65 0.00 40.82 5.18
354 355 4.320456 CTGCTGCGGTCCCTGTGT 62.320 66.667 0.00 0.00 0.00 3.72
355 356 3.832237 CTGCTGCGGTCCCTGTGTT 62.832 63.158 0.00 0.00 0.00 3.32
356 357 2.594592 GCTGCGGTCCCTGTGTTT 60.595 61.111 0.00 0.00 0.00 2.83
357 358 2.193536 GCTGCGGTCCCTGTGTTTT 61.194 57.895 0.00 0.00 0.00 2.43
358 359 1.734388 GCTGCGGTCCCTGTGTTTTT 61.734 55.000 0.00 0.00 0.00 1.94
398 399 3.850508 GGCGGTCCCTGTGTTTTT 58.149 55.556 0.00 0.00 0.00 1.94
399 400 1.362355 GGCGGTCCCTGTGTTTTTG 59.638 57.895 0.00 0.00 0.00 2.44
400 401 1.362355 GCGGTCCCTGTGTTTTTGG 59.638 57.895 0.00 0.00 0.00 3.28
401 402 1.388837 GCGGTCCCTGTGTTTTTGGT 61.389 55.000 0.00 0.00 0.00 3.67
402 403 1.970092 CGGTCCCTGTGTTTTTGGTA 58.030 50.000 0.00 0.00 0.00 3.25
403 404 1.605232 CGGTCCCTGTGTTTTTGGTAC 59.395 52.381 0.00 0.00 0.00 3.34
404 405 2.657143 GGTCCCTGTGTTTTTGGTACA 58.343 47.619 0.00 0.00 0.00 2.90
405 406 3.227614 GGTCCCTGTGTTTTTGGTACAT 58.772 45.455 0.00 0.00 39.30 2.29
406 407 4.400120 GGTCCCTGTGTTTTTGGTACATA 58.600 43.478 0.00 0.00 39.30 2.29
407 408 4.216902 GGTCCCTGTGTTTTTGGTACATAC 59.783 45.833 0.00 0.00 39.30 2.39
408 409 4.822896 GTCCCTGTGTTTTTGGTACATACA 59.177 41.667 0.00 0.00 39.30 2.29
409 410 4.822896 TCCCTGTGTTTTTGGTACATACAC 59.177 41.667 0.00 0.00 42.08 2.90
410 411 4.580995 CCCTGTGTTTTTGGTACATACACA 59.419 41.667 13.48 13.48 45.82 3.72
411 412 5.242838 CCCTGTGTTTTTGGTACATACACAT 59.757 40.000 14.13 0.00 46.32 3.21
412 413 6.378582 CCTGTGTTTTTGGTACATACACATC 58.621 40.000 14.13 0.83 46.32 3.06
413 414 6.206634 CCTGTGTTTTTGGTACATACACATCT 59.793 38.462 14.13 0.00 46.32 2.90
414 415 7.197071 TGTGTTTTTGGTACATACACATCTC 57.803 36.000 11.38 0.00 44.41 2.75
415 416 6.205853 TGTGTTTTTGGTACATACACATCTCC 59.794 38.462 11.38 0.00 44.41 3.71
416 417 6.430000 GTGTTTTTGGTACATACACATCTCCT 59.570 38.462 0.00 0.00 41.67 3.69
438 439 0.038618 GGCCCGACAAAATTGACCAC 60.039 55.000 0.00 0.00 0.00 4.16
440 441 1.231221 CCCGACAAAATTGACCACGA 58.769 50.000 0.00 0.00 0.00 4.35
446 449 1.778591 CAAAATTGACCACGACGTTGC 59.221 47.619 1.65 0.00 0.00 4.17
450 453 4.059459 GACCACGACGTTGCTGCG 62.059 66.667 1.65 0.00 37.94 5.18
466 469 3.136123 CGGTAGCCGTCGGGAAGA 61.136 66.667 14.38 0.00 42.73 2.87
474 478 1.607251 GCCGTCGGGAAGAAGAAGAAA 60.607 52.381 14.38 0.00 34.06 2.52
492 496 3.656045 AAAAAGCGGCCGACCACG 61.656 61.111 33.48 0.01 39.43 4.94
563 567 1.197721 CTGCCACAACGGATTCTGTTC 59.802 52.381 7.93 0.00 36.56 3.18
564 568 1.234821 GCCACAACGGATTCTGTTCA 58.765 50.000 7.93 0.00 36.56 3.18
565 569 1.197721 GCCACAACGGATTCTGTTCAG 59.802 52.381 7.93 4.14 36.56 3.02
566 570 2.766313 CCACAACGGATTCTGTTCAGA 58.234 47.619 7.93 0.00 36.56 3.27
567 571 2.738846 CCACAACGGATTCTGTTCAGAG 59.261 50.000 7.93 0.46 36.56 3.35
569 573 1.734465 CAACGGATTCTGTTCAGAGGC 59.266 52.381 7.93 0.27 0.00 4.70
571 575 0.539051 CGGATTCTGTTCAGAGGCCT 59.461 55.000 3.86 3.86 0.00 5.19
572 576 1.741732 CGGATTCTGTTCAGAGGCCTG 60.742 57.143 12.00 0.00 41.74 4.85
573 577 1.556911 GGATTCTGTTCAGAGGCCTGA 59.443 52.381 12.00 0.00 46.95 3.86
598 602 1.625870 CAGCTACGAATCGTGTGCG 59.374 57.895 19.42 13.64 42.08 5.34
634 638 0.871722 CTTCCACATCGGTCGCAAAA 59.128 50.000 0.00 0.00 35.57 2.44
648 652 3.498397 GTCGCAAAATGGAAACTCTCTCA 59.502 43.478 0.00 0.00 0.00 3.27
649 653 3.748048 TCGCAAAATGGAAACTCTCTCAG 59.252 43.478 0.00 0.00 0.00 3.35
651 655 4.394300 CGCAAAATGGAAACTCTCTCAGAT 59.606 41.667 0.00 0.00 0.00 2.90
652 656 5.106396 CGCAAAATGGAAACTCTCTCAGATT 60.106 40.000 0.00 0.00 0.00 2.40
653 657 6.320944 GCAAAATGGAAACTCTCTCAGATTC 58.679 40.000 0.00 0.00 33.96 2.52
654 658 6.150809 GCAAAATGGAAACTCTCTCAGATTCT 59.849 38.462 0.00 0.00 34.89 2.40
655 659 7.335422 GCAAAATGGAAACTCTCTCAGATTCTA 59.665 37.037 0.00 0.00 34.89 2.10
685 689 9.893634 TGTTGAAATAATAATCCTACTTTCCGA 57.106 29.630 0.00 0.00 0.00 4.55
734 950 7.334858 ACTGGTACTACTACTGTACTAGGAAC 58.665 42.308 17.21 2.05 46.64 3.62
737 953 8.163408 TGGTACTACTACTGTACTAGGAACAAA 58.837 37.037 2.96 0.00 39.89 2.83
752 968 4.339814 AGGAACAAAAACAATTGCGTAGGA 59.660 37.500 5.05 0.00 33.52 2.94
800 1016 4.883300 GTCCCGCGCGTCGTAGAG 62.883 72.222 29.95 11.21 36.95 2.43
807 1023 2.051166 GCGTCGTAGAGATCCCGC 60.051 66.667 0.00 0.00 36.95 6.13
835 1057 2.982130 CTTCCCACCTGACCCGAG 59.018 66.667 0.00 0.00 0.00 4.63
973 1226 4.512198 TCGTAATCATCTCCGACTCTTCTC 59.488 45.833 0.00 0.00 0.00 2.87
977 1230 0.466555 ATCTCCGACTCTTCTCCCCG 60.467 60.000 0.00 0.00 0.00 5.73
980 1233 2.756283 CGACTCTTCTCCCCGCCT 60.756 66.667 0.00 0.00 0.00 5.52
988 1241 4.574614 CTCCCCGCCTCCCCCATA 62.575 72.222 0.00 0.00 0.00 2.74
994 1247 4.533794 GCCTCCCCCATACCCCCT 62.534 72.222 0.00 0.00 0.00 4.79
995 1248 3.123244 GCCTCCCCCATACCCCCTA 62.123 68.421 0.00 0.00 0.00 3.53
1178 1436 4.129737 CGGCGGCGGAGAAGAGAA 62.130 66.667 25.36 0.00 0.00 2.87
1179 1437 2.264794 GGCGGCGGAGAAGAGAAA 59.735 61.111 9.78 0.00 0.00 2.52
1180 1438 1.811679 GGCGGCGGAGAAGAGAAAG 60.812 63.158 9.78 0.00 0.00 2.62
1181 1439 1.215647 GCGGCGGAGAAGAGAAAGA 59.784 57.895 9.78 0.00 0.00 2.52
1182 1440 0.804156 GCGGCGGAGAAGAGAAAGAG 60.804 60.000 9.78 0.00 0.00 2.85
1183 1441 0.179124 CGGCGGAGAAGAGAAAGAGG 60.179 60.000 0.00 0.00 0.00 3.69
1412 1692 2.413837 CACGGTCCTCGAAAAGATGTT 58.586 47.619 0.00 0.00 42.43 2.71
1413 1693 2.157668 CACGGTCCTCGAAAAGATGTTG 59.842 50.000 0.00 0.00 42.43 3.33
1421 1701 8.552034 GGTCCTCGAAAAGATGTTGAATTATAG 58.448 37.037 0.00 0.00 0.00 1.31
1423 1703 9.314321 TCCTCGAAAAGATGTTGAATTATAGTC 57.686 33.333 0.00 0.00 0.00 2.59
1487 1777 2.472909 GGGGCGAGGCTTGATTTCG 61.473 63.158 5.76 0.00 37.40 3.46
1496 1786 0.370273 GCTTGATTTCGATGACGCGT 59.630 50.000 13.85 13.85 39.58 6.01
1502 1792 3.860536 TGATTTCGATGACGCGTATTTGA 59.139 39.130 13.97 9.39 39.58 2.69
1511 1801 1.290203 CGCGTATTTGATGTGCTCCT 58.710 50.000 0.00 0.00 0.00 3.69
1532 1822 4.499183 CTGTAGTTACCCTTCTGCTTGAG 58.501 47.826 0.00 0.00 0.00 3.02
1544 1834 2.422479 TCTGCTTGAGATTGAATGCTGC 59.578 45.455 0.00 0.00 0.00 5.25
1578 1868 1.406860 ATGCTTTTGGGTTTGCCGGT 61.407 50.000 1.90 0.00 34.97 5.28
1589 1880 2.036089 GGTTTGCCGGTGGTAAAATTCA 59.964 45.455 1.90 0.00 38.85 2.57
1592 1883 3.584406 TGCCGGTGGTAAAATTCATTG 57.416 42.857 1.90 0.00 0.00 2.82
1593 1884 3.157881 TGCCGGTGGTAAAATTCATTGA 58.842 40.909 1.90 0.00 0.00 2.57
1595 1886 3.442273 GCCGGTGGTAAAATTCATTGAGA 59.558 43.478 1.90 0.00 0.00 3.27
1596 1887 4.438744 GCCGGTGGTAAAATTCATTGAGAG 60.439 45.833 1.90 0.00 0.00 3.20
1597 1888 4.096382 CCGGTGGTAAAATTCATTGAGAGG 59.904 45.833 0.00 0.00 0.00 3.69
1604 1895 6.148811 GGTAAAATTCATTGAGAGGTCGACAA 59.851 38.462 18.91 2.55 0.00 3.18
1614 1905 0.680061 AGGTCGACAAAGGTGGTCTC 59.320 55.000 18.91 0.00 33.11 3.36
1696 1987 3.596066 CTACCTGTGCTGCGCTGGT 62.596 63.158 35.74 35.74 45.49 4.00
1704 1995 3.057548 CTGCGCTGGTCATTGCCA 61.058 61.111 9.73 0.88 36.97 4.92
1719 2010 0.528924 TGCCACAGATTGCAATGCTC 59.471 50.000 18.59 3.14 33.87 4.26
1768 2059 5.240844 CCTTTTCCGTTTTAGTCCATTCTGT 59.759 40.000 0.00 0.00 0.00 3.41
1804 2096 3.895041 TGGGGGACAAGATTCAGTTTTTC 59.105 43.478 0.00 0.00 0.00 2.29
1805 2097 3.895041 GGGGGACAAGATTCAGTTTTTCA 59.105 43.478 0.00 0.00 0.00 2.69
1806 2098 4.528206 GGGGGACAAGATTCAGTTTTTCAT 59.472 41.667 0.00 0.00 0.00 2.57
1807 2099 5.473039 GGGGACAAGATTCAGTTTTTCATG 58.527 41.667 0.00 0.00 0.00 3.07
1808 2100 5.011023 GGGGACAAGATTCAGTTTTTCATGT 59.989 40.000 0.00 0.00 0.00 3.21
1809 2101 6.152379 GGGACAAGATTCAGTTTTTCATGTC 58.848 40.000 0.00 0.00 37.37 3.06
1816 2109 8.103948 AGATTCAGTTTTTCATGTCTAAGTGG 57.896 34.615 0.00 0.00 0.00 4.00
1849 2146 1.604604 TACCTTTGCTGCTGTGTTCC 58.395 50.000 0.00 0.00 0.00 3.62
1871 2168 2.012673 GCCTGTGGTTCAGATCATGTC 58.987 52.381 0.00 0.00 46.27 3.06
2023 2321 2.484264 GTGACACTGGTGTAATTGAGGC 59.516 50.000 6.35 0.00 45.05 4.70
2028 2326 1.743995 GGTGTAATTGAGGCCGCGT 60.744 57.895 4.92 0.00 0.00 6.01
2029 2327 1.423845 GTGTAATTGAGGCCGCGTG 59.576 57.895 4.92 0.00 0.00 5.34
2030 2328 2.395360 TGTAATTGAGGCCGCGTGC 61.395 57.895 4.92 8.33 40.16 5.34
2031 2329 2.046796 TAATTGAGGCCGCGTGCA 60.047 55.556 18.87 3.00 43.89 4.57
2032 2330 2.106074 TAATTGAGGCCGCGTGCAG 61.106 57.895 18.87 0.00 43.89 4.41
2061 2359 4.214437 CGCTACTACGAACGGGTAATAAG 58.786 47.826 0.00 0.00 34.06 1.73
2075 2373 0.035439 AATAAGTGCACGTGAGGGGG 60.035 55.000 22.23 0.00 32.68 5.40
2084 2382 2.785562 CACGTGAGGGGGTAATTTTGA 58.214 47.619 10.90 0.00 0.00 2.69
2119 2417 0.537188 ATGGTGCCACGAGTTAGGAG 59.463 55.000 0.00 0.00 0.00 3.69
2160 2458 1.296727 CTAGGAACCGCGGGAAAATC 58.703 55.000 31.76 18.01 0.00 2.17
2161 2459 0.906775 TAGGAACCGCGGGAAAATCT 59.093 50.000 31.76 18.61 0.00 2.40
2163 2461 1.279846 AGGAACCGCGGGAAAATCTAA 59.720 47.619 31.76 0.00 0.00 2.10
2164 2462 1.669265 GGAACCGCGGGAAAATCTAAG 59.331 52.381 31.76 0.00 0.00 2.18
2165 2463 1.063616 GAACCGCGGGAAAATCTAAGC 59.936 52.381 31.76 0.17 0.00 3.09
2166 2464 0.746923 ACCGCGGGAAAATCTAAGCC 60.747 55.000 31.76 0.00 0.00 4.35
2167 2465 0.746563 CCGCGGGAAAATCTAAGCCA 60.747 55.000 20.10 0.00 0.00 4.75
2168 2466 0.377203 CGCGGGAAAATCTAAGCCAC 59.623 55.000 0.00 0.00 0.00 5.01
2177 2639 7.176690 CGGGAAAATCTAAGCCACCATATAAAT 59.823 37.037 0.00 0.00 0.00 1.40
2222 2684 2.967507 TTTGGGTTAGCACGCCTGCA 62.968 55.000 10.37 0.00 46.97 4.41
2264 2727 5.221441 GGAATGTCTGCTGGTAAAAAGGTTT 60.221 40.000 0.00 0.00 0.00 3.27
2387 2853 5.163364 TGCAGTTGGAATATGTTGTGGTTTT 60.163 36.000 0.00 0.00 0.00 2.43
2397 2863 2.757868 TGTTGTGGTTTTCTCTGTTGGG 59.242 45.455 0.00 0.00 0.00 4.12
2433 2899 3.311596 GCGTTTTTGTCCAGTGTCTAGTT 59.688 43.478 0.00 0.00 0.00 2.24
2444 2910 6.256757 GTCCAGTGTCTAGTTATGAAATCTGC 59.743 42.308 0.00 0.00 0.00 4.26
2462 2928 4.081406 TCTGCTGTGCATTTGGTCTTATT 58.919 39.130 0.00 0.00 38.13 1.40
2695 3166 9.983804 GAGTAAATGTTAGTATTTGCCTTGTAC 57.016 33.333 0.00 0.00 34.47 2.90
2911 3382 0.685097 AGCACCAGGACATTGTACGT 59.315 50.000 0.00 0.00 0.00 3.57
2961 3433 1.586422 TGCTTTATCTGCTGATCCGC 58.414 50.000 9.62 11.06 34.32 5.54
2987 3459 9.933723 CCATCTTATTCTTTCCATTTCTTGTTT 57.066 29.630 0.00 0.00 0.00 2.83
3099 3571 6.266786 TGGTGTCTCAGTTTCACTTAGTATGA 59.733 38.462 0.00 0.00 33.30 2.15
3192 3672 7.989741 AGTTGAGGAACATGTTTCCATAGATAG 59.010 37.037 21.54 0.00 41.00 2.08
3194 3674 5.625150 AGGAACATGTTTCCATAGATAGCC 58.375 41.667 21.54 11.38 41.00 3.93
3258 3768 8.710239 AGAAATCCCTCTTCCTTACTTTCTATC 58.290 37.037 0.00 0.00 31.80 2.08
3259 3769 8.631275 AAATCCCTCTTCCTTACTTTCTATCT 57.369 34.615 0.00 0.00 0.00 1.98
3260 3770 9.731001 AAATCCCTCTTCCTTACTTTCTATCTA 57.269 33.333 0.00 0.00 0.00 1.98
3261 3771 9.906274 AATCCCTCTTCCTTACTTTCTATCTAT 57.094 33.333 0.00 0.00 0.00 1.98
3433 3954 3.999663 GCATCTTTGTAGTTCTCTGCTGT 59.000 43.478 0.00 0.00 0.00 4.40
3437 3958 6.156748 TCTTTGTAGTTCTCTGCTGTAACA 57.843 37.500 11.75 0.00 0.00 2.41
3460 3981 7.064229 ACATGGGTTTCTTAAGGAGTTAACAA 58.936 34.615 8.61 0.00 0.00 2.83
3711 4240 3.477530 CCTTCTTTTTCCTCTCCACGTT 58.522 45.455 0.00 0.00 0.00 3.99
3730 4259 6.183360 CCACGTTAGGGTCTTATGTTCAGATA 60.183 42.308 0.00 0.00 0.00 1.98
3886 4415 6.509656 TGCATATGCTTGATTGATCCTTTTC 58.490 36.000 27.13 0.00 42.66 2.29
4236 4767 9.847706 AACTTTGTTTTGAGTTTTTGTTTTTGT 57.152 22.222 0.00 0.00 32.43 2.83
4237 4768 9.847706 ACTTTGTTTTGAGTTTTTGTTTTTGTT 57.152 22.222 0.00 0.00 0.00 2.83
4328 4859 3.516700 TCTCTTGAATGACAGAGATGGCA 59.483 43.478 0.00 0.00 32.34 4.92
4352 4883 5.834742 ACATCCCTGAAATATTTGCATGCTA 59.165 36.000 20.33 8.83 0.00 3.49
4407 4938 3.905968 TGATACCGTCCCTTCTGTATCA 58.094 45.455 7.01 7.01 44.27 2.15
4574 5105 2.305858 AGTGAACGGAGGGAGTACTT 57.694 50.000 0.00 0.00 0.00 2.24
4690 5221 6.836953 TGACAATACATGATGTTTGGTAACG 58.163 36.000 2.29 0.00 37.06 3.18
4795 5326 4.718940 ACACACCAAGGTTCTTTTTGAG 57.281 40.909 0.00 0.00 0.00 3.02
5003 5534 6.833342 CTGTTTGCAACTGCTAAGATTTTT 57.167 33.333 0.00 0.00 42.66 1.94
5308 5839 6.544928 TGCCTTCAGTGTTCTCTAATATGA 57.455 37.500 0.00 0.00 0.00 2.15
5386 5917 2.515398 CCTGGTGCTGTCAACCCA 59.485 61.111 0.00 0.00 0.00 4.51
5522 6053 3.007614 TGCCCTCAAGTACTAACCAGTTC 59.992 47.826 0.00 0.00 36.14 3.01
5632 6163 4.214119 TGTTGCAGTTCTATCACTTGCTTC 59.786 41.667 0.00 0.00 0.00 3.86
5786 6317 6.627287 GCTCAACCTTTCTGTTAACAACCTTT 60.627 38.462 10.03 0.00 0.00 3.11
5866 6397 2.033602 CAACCGAGACCCCAACCC 59.966 66.667 0.00 0.00 0.00 4.11
5887 6418 5.133830 ACCCGGGGTATTTTTCTTCTATGAT 59.866 40.000 27.92 0.00 32.11 2.45
5970 6501 5.871396 AATATGTGACGGTTCTCACCTAT 57.129 39.130 1.89 0.02 41.64 2.57
5972 6503 2.244695 TGTGACGGTTCTCACCTATGT 58.755 47.619 1.89 0.00 41.64 2.29
5974 6505 3.192001 TGTGACGGTTCTCACCTATGTAC 59.808 47.826 1.89 0.00 41.64 2.90
5975 6506 3.192001 GTGACGGTTCTCACCTATGTACA 59.808 47.826 0.00 0.00 41.64 2.90
5976 6507 3.192001 TGACGGTTCTCACCTATGTACAC 59.808 47.826 0.00 0.00 41.64 2.90
5977 6508 3.159472 ACGGTTCTCACCTATGTACACA 58.841 45.455 0.00 0.00 41.64 3.72
5979 6510 3.675228 CGGTTCTCACCTATGTACACACC 60.675 52.174 0.00 0.00 41.64 4.16
5980 6511 3.514309 GGTTCTCACCTATGTACACACCT 59.486 47.826 0.00 0.00 40.44 4.00
6151 6799 2.158682 GCCCCTCCCAAAATTTTGTTGT 60.159 45.455 25.25 0.00 36.45 3.32
6211 6859 1.021202 TGCTGTTATTGCATACCCGC 58.979 50.000 0.00 0.00 35.31 6.13
6241 6889 4.365514 TTGCAGGATGAAACTGGACTTA 57.634 40.909 0.00 0.00 39.69 2.24
6350 6999 5.522460 GCGCTGAGAGTAAAATAACATACCA 59.478 40.000 0.00 0.00 0.00 3.25
6416 7066 5.327616 TCCACAATTTGCATGGATACTTG 57.672 39.130 1.73 0.00 44.23 3.16
6492 7142 5.701750 TGTTTAGTTTAGCCATTTGTAGCGA 59.298 36.000 0.00 0.00 0.00 4.93
6504 7154 1.725641 TGTAGCGAGCACAAGATTGG 58.274 50.000 0.00 0.00 0.00 3.16
6535 7185 6.039717 ACTCTATTGAGCTCTTCATGTCTCTC 59.960 42.308 16.19 0.00 43.85 3.20
6755 7476 8.861086 TCATCTCTTTTAGTACAGAAAGTGTCT 58.139 33.333 16.01 7.43 40.94 3.41
6848 7569 4.158394 TGCCTTATTGATCTGTTTTCTGCC 59.842 41.667 0.00 0.00 0.00 4.85
6875 7596 0.803768 CAGGGATCTTCACTGTCGCG 60.804 60.000 0.00 0.00 42.79 5.87
6955 7676 5.426833 AGATAGGCAAGTACAGATGAAACCT 59.573 40.000 0.00 0.00 0.00 3.50
6956 7677 6.611642 AGATAGGCAAGTACAGATGAAACCTA 59.388 38.462 0.00 0.00 0.00 3.08
6957 7678 5.091261 AGGCAAGTACAGATGAAACCTAG 57.909 43.478 0.00 0.00 0.00 3.02
6958 7679 4.080863 AGGCAAGTACAGATGAAACCTAGG 60.081 45.833 7.41 7.41 0.00 3.02
6975 7696 6.530019 ACCTAGGCAATATTTTCCAAGTTG 57.470 37.500 9.30 0.00 0.00 3.16
7000 7721 1.559682 GCTTGTAAGGAGGTGGATCCA 59.440 52.381 11.44 11.44 42.26 3.41
7063 7784 4.142534 ACAAGGCAATCGAAAGTGATGATG 60.143 41.667 0.00 0.00 0.00 3.07
7144 7866 2.416431 GGCAAGTGCTTTCATGTCCATC 60.416 50.000 2.85 0.00 41.70 3.51
7268 7993 4.049186 GTGTCACATCTTCGTTACTGTGT 58.951 43.478 0.00 0.00 39.89 3.72
7270 7995 3.428870 GTCACATCTTCGTTACTGTGTGG 59.571 47.826 0.00 0.00 39.89 4.17
7281 8008 4.212425 CGTTACTGTGTGGTGCTGATTTTA 59.788 41.667 0.00 0.00 0.00 1.52
7286 8013 5.984926 ACTGTGTGGTGCTGATTTTATTTTG 59.015 36.000 0.00 0.00 0.00 2.44
7343 8073 7.608308 AGTTGACTTGAGCTCTTATGAAATC 57.392 36.000 16.19 0.10 0.00 2.17
7401 8131 7.896811 TGCGAGTCTTTTAGGACATGATATAT 58.103 34.615 0.00 0.00 38.57 0.86
7402 8132 7.814587 TGCGAGTCTTTTAGGACATGATATATG 59.185 37.037 0.00 0.00 38.57 1.78
7498 8633 9.941325 TGAAATTTGTAAGTGGCATATCAAATT 57.059 25.926 19.42 19.42 42.90 1.82
7505 8640 8.986847 TGTAAGTGGCATATCAAATTGTTTTTG 58.013 29.630 0.00 0.00 0.00 2.44
7512 8647 8.185505 GGCATATCAAATTGTTTTTGCATTCAT 58.814 29.630 12.59 0.00 30.09 2.57
7525 8660 3.715495 TGCATTCATTTTTGCTGAACGT 58.285 36.364 0.00 0.00 39.60 3.99
7544 8679 0.179156 TAGTTGACGCCGTTCGATCC 60.179 55.000 0.00 0.00 41.67 3.36
7567 8702 2.046283 TCGTGAGATCGTGACAACAC 57.954 50.000 0.00 0.00 38.29 3.32
7590 8725 1.135094 TAGACTCCCGTCCCGATAGT 58.865 55.000 0.00 0.00 41.16 2.12
7601 8736 0.810031 CCCGATAGTCAACCCGCAAG 60.810 60.000 0.00 0.00 0.00 4.01
7602 8737 1.429148 CCGATAGTCAACCCGCAAGC 61.429 60.000 0.00 0.00 0.00 4.01
7603 8738 1.429148 CGATAGTCAACCCGCAAGCC 61.429 60.000 0.00 0.00 0.00 4.35
7604 8739 0.392461 GATAGTCAACCCGCAAGCCA 60.392 55.000 0.00 0.00 0.00 4.75
7605 8740 0.037590 ATAGTCAACCCGCAAGCCAA 59.962 50.000 0.00 0.00 0.00 4.52
7606 8741 0.037590 TAGTCAACCCGCAAGCCAAT 59.962 50.000 0.00 0.00 0.00 3.16
7607 8742 1.080569 GTCAACCCGCAAGCCAATG 60.081 57.895 0.00 0.00 0.00 2.82
7608 8743 2.432972 CAACCCGCAAGCCAATGC 60.433 61.111 0.00 0.00 42.94 3.56
7609 8744 3.694538 AACCCGCAAGCCAATGCC 61.695 61.111 1.63 0.00 43.47 4.40
7610 8745 4.684134 ACCCGCAAGCCAATGCCT 62.684 61.111 1.63 0.00 43.47 4.75
7611 8746 3.384532 CCCGCAAGCCAATGCCTT 61.385 61.111 1.63 0.00 43.47 4.35
7613 8748 1.004679 CCGCAAGCCAATGCCTTTT 60.005 52.632 1.63 0.00 43.47 2.27
7614 8749 0.246086 CCGCAAGCCAATGCCTTTTA 59.754 50.000 1.63 0.00 43.47 1.52
7654 8813 6.761731 TGATCGTTTGGTATTTTTGCAAAG 57.238 33.333 12.41 0.00 0.00 2.77
7656 8815 7.426410 TGATCGTTTGGTATTTTTGCAAAGTA 58.574 30.769 12.41 7.08 0.00 2.24
7684 8843 3.650281 TGTGCCAGGTATCACATTCAT 57.350 42.857 0.00 0.00 38.18 2.57
7685 8844 4.769345 TGTGCCAGGTATCACATTCATA 57.231 40.909 0.00 0.00 38.18 2.15
7689 8848 6.936335 TGTGCCAGGTATCACATTCATATAAG 59.064 38.462 0.00 0.00 38.18 1.73
7690 8849 6.936900 GTGCCAGGTATCACATTCATATAAGT 59.063 38.462 0.00 0.00 33.63 2.24
7691 8850 8.094548 GTGCCAGGTATCACATTCATATAAGTA 58.905 37.037 0.00 0.00 33.63 2.24
7692 8851 8.094548 TGCCAGGTATCACATTCATATAAGTAC 58.905 37.037 0.00 0.00 0.00 2.73
7693 8852 7.549488 GCCAGGTATCACATTCATATAAGTACC 59.451 40.741 0.00 0.00 0.00 3.34
7694 8853 8.816894 CCAGGTATCACATTCATATAAGTACCT 58.183 37.037 0.00 0.00 39.82 3.08
7697 8856 9.998106 GGTATCACATTCATATAAGTACCTTGT 57.002 33.333 0.00 0.00 0.00 3.16
7768 8927 6.936900 CGGAGGGAGTAATATCAATTTGACAT 59.063 38.462 0.15 0.00 0.00 3.06
7769 8928 7.445402 CGGAGGGAGTAATATCAATTTGACATT 59.555 37.037 7.93 7.93 27.88 2.71
7770 8929 9.136323 GGAGGGAGTAATATCAATTTGACATTT 57.864 33.333 8.12 2.73 25.54 2.32
7773 8932 9.533253 GGGAGTAATATCAATTTGACATTTTGG 57.467 33.333 8.12 0.00 25.54 3.28
7783 8942 9.557061 TCAATTTGACATTTTGGATCAATTTGA 57.443 25.926 14.66 14.66 43.45 2.69
7784 8943 9.601971 CAATTTGACATTTTGGATCAATTTGAC 57.398 29.630 0.15 0.00 41.63 3.18
7871 9492 8.611654 ATTTGATTGCCATTATAATTCAAGGC 57.388 30.769 14.66 14.66 42.32 4.35
7873 9494 4.582701 TTGCCATTATAATTCAAGGCGG 57.417 40.909 15.87 5.92 44.83 6.13
7874 9495 2.295909 TGCCATTATAATTCAAGGCGGC 59.704 45.455 15.87 13.89 44.83 6.53
7907 9528 2.443416 GAAAGGCGGGAAATACCACTT 58.557 47.619 0.00 0.00 41.20 3.16
7924 9545 3.558505 CACTTTGTATGTTGCTGACAGC 58.441 45.455 20.86 20.86 42.62 4.40
7926 9547 3.251729 ACTTTGTATGTTGCTGACAGCTG 59.748 43.478 26.94 13.48 42.97 4.24
7979 9601 5.163744 TGCGTAACAAAACTGTAGCTTTTGA 60.164 36.000 13.40 0.00 39.85 2.69
7985 9607 6.687604 ACAAAACTGTAGCTTTTGAACACTT 58.312 32.000 13.40 0.00 39.85 3.16
8038 9660 1.276421 GCTCTGACCCAGAAACTGCTA 59.724 52.381 0.00 0.00 40.18 3.49
8043 9665 5.023452 TCTGACCCAGAAACTGCTATAGAA 58.977 41.667 3.21 0.00 37.57 2.10
8103 9725 5.121221 AGAAAAAGCAATAAACCGTCCAG 57.879 39.130 0.00 0.00 0.00 3.86
8117 9739 3.772096 TCCAGCAGGAAAATTGGCT 57.228 47.368 0.00 0.00 42.23 4.75
8120 9742 1.977685 AGCAGGAAAATTGGCTGGC 59.022 52.632 0.00 0.00 34.83 4.85
8122 9744 0.108472 GCAGGAAAATTGGCTGGCTC 60.108 55.000 2.00 0.00 0.00 4.70
8124 9746 1.897802 CAGGAAAATTGGCTGGCTCTT 59.102 47.619 2.00 0.00 0.00 2.85
8186 9829 6.455360 TTGACTTTGCTGAAGAAATTGACT 57.545 33.333 7.30 0.00 38.77 3.41
8187 9830 6.455360 TGACTTTGCTGAAGAAATTGACTT 57.545 33.333 7.30 0.00 38.77 3.01
8188 9831 7.566760 TGACTTTGCTGAAGAAATTGACTTA 57.433 32.000 7.30 0.00 38.77 2.24
8189 9832 7.995289 TGACTTTGCTGAAGAAATTGACTTAA 58.005 30.769 7.30 0.00 38.77 1.85
8190 9833 7.915397 TGACTTTGCTGAAGAAATTGACTTAAC 59.085 33.333 7.30 0.00 38.77 2.01
8191 9834 7.771183 ACTTTGCTGAAGAAATTGACTTAACA 58.229 30.769 7.30 0.00 38.77 2.41
8192 9835 8.416329 ACTTTGCTGAAGAAATTGACTTAACAT 58.584 29.630 7.30 0.00 38.77 2.71
8193 9836 8.578308 TTTGCTGAAGAAATTGACTTAACATG 57.422 30.769 0.00 0.00 0.00 3.21
8194 9837 7.275888 TGCTGAAGAAATTGACTTAACATGT 57.724 32.000 0.00 0.00 0.00 3.21
8195 9838 7.362662 TGCTGAAGAAATTGACTTAACATGTC 58.637 34.615 0.00 0.00 35.21 3.06
8196 9839 6.521133 GCTGAAGAAATTGACTTAACATGTCG 59.479 38.462 0.00 0.00 37.26 4.35
8197 9840 7.571244 GCTGAAGAAATTGACTTAACATGTCGA 60.571 37.037 0.00 0.00 37.26 4.20
8198 9841 8.322906 TGAAGAAATTGACTTAACATGTCGAT 57.677 30.769 0.00 0.00 39.48 3.59
8199 9842 8.783093 TGAAGAAATTGACTTAACATGTCGATT 58.217 29.630 0.00 0.00 45.34 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.850680 TGGGGTTTTCAGTATATGGTCAC 58.149 43.478 0.00 0.00 0.00 3.67
1 2 5.044476 ACATGGGGTTTTCAGTATATGGTCA 60.044 40.000 0.00 0.00 0.00 4.02
2 3 5.445964 ACATGGGGTTTTCAGTATATGGTC 58.554 41.667 0.00 0.00 0.00 4.02
3 4 5.445964 GACATGGGGTTTTCAGTATATGGT 58.554 41.667 0.00 0.00 0.00 3.55
4 5 4.827284 GGACATGGGGTTTTCAGTATATGG 59.173 45.833 0.00 0.00 0.00 2.74
5 6 4.827284 GGGACATGGGGTTTTCAGTATATG 59.173 45.833 0.00 0.00 0.00 1.78
6 7 4.141018 GGGGACATGGGGTTTTCAGTATAT 60.141 45.833 0.00 0.00 0.00 0.86
7 8 3.203487 GGGGACATGGGGTTTTCAGTATA 59.797 47.826 0.00 0.00 0.00 1.47
8 9 2.024369 GGGGACATGGGGTTTTCAGTAT 60.024 50.000 0.00 0.00 0.00 2.12
9 10 1.356398 GGGGACATGGGGTTTTCAGTA 59.644 52.381 0.00 0.00 0.00 2.74
10 11 0.114364 GGGGACATGGGGTTTTCAGT 59.886 55.000 0.00 0.00 0.00 3.41
11 12 0.114168 TGGGGACATGGGGTTTTCAG 59.886 55.000 0.00 0.00 33.40 3.02
12 13 2.255538 TGGGGACATGGGGTTTTCA 58.744 52.632 0.00 0.00 33.40 2.69
23 24 2.750802 TTCCCTGCATTGATGGGGACA 61.751 52.381 8.61 0.00 46.37 4.02
24 25 0.033208 TTCCCTGCATTGATGGGGAC 60.033 55.000 8.61 0.00 46.37 4.46
25 26 0.935942 ATTCCCTGCATTGATGGGGA 59.064 50.000 5.07 5.07 45.22 4.81
26 27 2.522185 CTATTCCCTGCATTGATGGGG 58.478 52.381 8.05 4.15 41.22 4.96
27 28 1.891150 GCTATTCCCTGCATTGATGGG 59.109 52.381 1.42 1.42 42.20 4.00
28 29 2.295349 GTGCTATTCCCTGCATTGATGG 59.705 50.000 0.00 0.00 41.45 3.51
29 30 2.953648 TGTGCTATTCCCTGCATTGATG 59.046 45.455 0.00 0.00 41.45 3.07
30 31 2.954318 GTGTGCTATTCCCTGCATTGAT 59.046 45.455 0.00 0.00 41.45 2.57
31 32 2.290832 TGTGTGCTATTCCCTGCATTGA 60.291 45.455 0.00 0.00 41.45 2.57
32 33 2.093890 TGTGTGCTATTCCCTGCATTG 58.906 47.619 0.00 0.00 41.45 2.82
33 34 2.094675 GTGTGTGCTATTCCCTGCATT 58.905 47.619 0.00 0.00 41.45 3.56
34 35 1.004628 TGTGTGTGCTATTCCCTGCAT 59.995 47.619 0.00 0.00 41.45 3.96
35 36 0.399833 TGTGTGTGCTATTCCCTGCA 59.600 50.000 0.00 0.00 36.79 4.41
36 37 1.755179 ATGTGTGTGCTATTCCCTGC 58.245 50.000 0.00 0.00 0.00 4.85
37 38 5.895636 TTTTATGTGTGTGCTATTCCCTG 57.104 39.130 0.00 0.00 0.00 4.45
38 39 6.627953 GCAATTTTATGTGTGTGCTATTCCCT 60.628 38.462 0.00 0.00 0.00 4.20
39 40 5.519927 GCAATTTTATGTGTGTGCTATTCCC 59.480 40.000 0.00 0.00 0.00 3.97
40 41 6.098679 TGCAATTTTATGTGTGTGCTATTCC 58.901 36.000 0.00 0.00 33.19 3.01
41 42 7.043192 GGATGCAATTTTATGTGTGTGCTATTC 60.043 37.037 0.00 0.00 33.19 1.75
42 43 6.757947 GGATGCAATTTTATGTGTGTGCTATT 59.242 34.615 0.00 0.00 33.19 1.73
43 44 6.275335 GGATGCAATTTTATGTGTGTGCTAT 58.725 36.000 0.00 0.00 33.19 2.97
44 45 5.649557 GGATGCAATTTTATGTGTGTGCTA 58.350 37.500 0.00 0.00 33.19 3.49
45 46 4.497300 GGATGCAATTTTATGTGTGTGCT 58.503 39.130 0.00 0.00 33.19 4.40
46 47 3.304026 CGGATGCAATTTTATGTGTGTGC 59.696 43.478 0.00 0.00 0.00 4.57
47 48 3.304026 GCGGATGCAATTTTATGTGTGTG 59.696 43.478 0.00 0.00 42.15 3.82
48 49 3.510719 GCGGATGCAATTTTATGTGTGT 58.489 40.909 0.00 0.00 42.15 3.72
67 68 0.461163 TATCATTGGGTCCGTGTGCG 60.461 55.000 0.00 0.00 37.95 5.34
68 69 1.603802 CATATCATTGGGTCCGTGTGC 59.396 52.381 0.00 0.00 0.00 4.57
69 70 2.917933 ACATATCATTGGGTCCGTGTG 58.082 47.619 0.00 0.00 0.00 3.82
70 71 3.644966 AACATATCATTGGGTCCGTGT 57.355 42.857 0.00 0.00 0.00 4.49
71 72 3.315191 GGAAACATATCATTGGGTCCGTG 59.685 47.826 0.00 0.00 0.00 4.94
72 73 3.551846 GGAAACATATCATTGGGTCCGT 58.448 45.455 0.00 0.00 0.00 4.69
73 74 2.548057 CGGAAACATATCATTGGGTCCG 59.452 50.000 0.00 0.00 39.32 4.79
74 75 3.815809 TCGGAAACATATCATTGGGTCC 58.184 45.455 0.00 0.00 0.00 4.46
75 76 7.530010 CATTATCGGAAACATATCATTGGGTC 58.470 38.462 0.00 0.00 0.00 4.46
76 77 6.071952 GCATTATCGGAAACATATCATTGGGT 60.072 38.462 0.00 0.00 0.00 4.51
77 78 6.151648 AGCATTATCGGAAACATATCATTGGG 59.848 38.462 0.00 0.00 0.00 4.12
78 79 7.149569 AGCATTATCGGAAACATATCATTGG 57.850 36.000 0.00 0.00 0.00 3.16
79 80 8.177663 GGTAGCATTATCGGAAACATATCATTG 58.822 37.037 0.00 0.00 0.00 2.82
80 81 7.336931 GGGTAGCATTATCGGAAACATATCATT 59.663 37.037 0.00 0.00 0.00 2.57
81 82 6.823689 GGGTAGCATTATCGGAAACATATCAT 59.176 38.462 0.00 0.00 0.00 2.45
82 83 6.170506 GGGTAGCATTATCGGAAACATATCA 58.829 40.000 0.00 0.00 0.00 2.15
83 84 6.170506 TGGGTAGCATTATCGGAAACATATC 58.829 40.000 0.00 0.00 0.00 1.63
84 85 6.121776 TGGGTAGCATTATCGGAAACATAT 57.878 37.500 0.00 0.00 0.00 1.78
85 86 5.547465 CTGGGTAGCATTATCGGAAACATA 58.453 41.667 0.00 0.00 0.00 2.29
86 87 4.389374 CTGGGTAGCATTATCGGAAACAT 58.611 43.478 0.00 0.00 0.00 2.71
87 88 3.804036 CTGGGTAGCATTATCGGAAACA 58.196 45.455 0.00 0.00 0.00 2.83
100 101 2.434359 AAGCGTTCGCTGGGTAGC 60.434 61.111 20.05 0.00 46.62 3.58
101 102 2.740714 GCAAGCGTTCGCTGGGTAG 61.741 63.158 20.05 9.32 41.76 3.18
102 103 2.740826 GCAAGCGTTCGCTGGGTA 60.741 61.111 20.05 0.00 41.76 3.69
103 104 4.626081 AGCAAGCGTTCGCTGGGT 62.626 61.111 20.05 19.23 41.76 4.51
107 108 2.740055 CTCCAGCAAGCGTTCGCT 60.740 61.111 14.02 14.02 44.14 4.93
108 109 3.793144 CCTCCAGCAAGCGTTCGC 61.793 66.667 9.24 9.24 0.00 4.70
109 110 2.357517 ACCTCCAGCAAGCGTTCG 60.358 61.111 0.00 0.00 0.00 3.95
110 111 2.970974 GCACCTCCAGCAAGCGTTC 61.971 63.158 0.00 0.00 0.00 3.95
111 112 2.980233 GCACCTCCAGCAAGCGTT 60.980 61.111 0.00 0.00 0.00 4.84
112 113 3.557903 ATGCACCTCCAGCAAGCGT 62.558 57.895 0.00 0.00 46.27 5.07
113 114 2.749044 ATGCACCTCCAGCAAGCG 60.749 61.111 0.00 0.00 46.27 4.68
114 115 2.707849 CCATGCACCTCCAGCAAGC 61.708 63.158 0.00 0.00 46.27 4.01
115 116 0.035152 TACCATGCACCTCCAGCAAG 60.035 55.000 0.00 0.00 46.27 4.01
116 117 0.403655 TTACCATGCACCTCCAGCAA 59.596 50.000 0.00 0.00 46.27 3.91
118 119 1.544724 TTTTACCATGCACCTCCAGC 58.455 50.000 0.00 0.00 0.00 4.85
119 120 2.890311 TGTTTTTACCATGCACCTCCAG 59.110 45.455 0.00 0.00 0.00 3.86
120 121 2.950781 TGTTTTTACCATGCACCTCCA 58.049 42.857 0.00 0.00 0.00 3.86
121 122 4.329462 TTTGTTTTTACCATGCACCTCC 57.671 40.909 0.00 0.00 0.00 4.30
122 123 5.296748 ACATTTGTTTTTACCATGCACCTC 58.703 37.500 0.00 0.00 0.00 3.85
123 124 5.289083 ACATTTGTTTTTACCATGCACCT 57.711 34.783 0.00 0.00 0.00 4.00
124 125 6.370433 AAACATTTGTTTTTACCATGCACC 57.630 33.333 2.88 0.00 45.07 5.01
136 137 4.341672 ATCGCCGCGAAAAACATTTGTTT 61.342 39.130 21.02 2.88 42.84 2.83
137 138 0.849579 CGCCGCGAAAAACATTTGTT 59.150 45.000 8.23 0.00 40.50 2.83
138 139 0.029567 TCGCCGCGAAAAACATTTGT 59.970 45.000 14.27 0.00 31.06 2.83
139 140 1.335935 ATCGCCGCGAAAAACATTTG 58.664 45.000 21.02 0.00 39.99 2.32
140 141 2.058913 AATCGCCGCGAAAAACATTT 57.941 40.000 21.02 4.54 39.99 2.32
141 142 2.058913 AAATCGCCGCGAAAAACATT 57.941 40.000 21.02 5.33 39.99 2.71
142 143 2.511879 GTAAATCGCCGCGAAAAACAT 58.488 42.857 21.02 0.00 39.99 2.71
143 144 1.722119 CGTAAATCGCCGCGAAAAACA 60.722 47.619 21.02 0.67 39.99 2.83
144 145 0.895958 CGTAAATCGCCGCGAAAAAC 59.104 50.000 21.02 15.66 39.99 2.43
145 146 0.512085 ACGTAAATCGCCGCGAAAAA 59.488 45.000 21.02 4.86 44.19 1.94
146 147 0.512085 AACGTAAATCGCCGCGAAAA 59.488 45.000 21.02 5.24 44.19 2.29
147 148 0.179245 CAACGTAAATCGCCGCGAAA 60.179 50.000 21.02 5.63 44.19 3.46
148 149 1.416820 CAACGTAAATCGCCGCGAA 59.583 52.632 21.02 0.00 44.19 4.70
149 150 3.073874 GCAACGTAAATCGCCGCGA 62.074 57.895 19.34 19.34 44.19 5.87
150 151 2.643485 GCAACGTAAATCGCCGCG 60.643 61.111 6.39 6.39 44.19 6.46
151 152 1.580132 CAGCAACGTAAATCGCCGC 60.580 57.895 0.00 0.00 44.19 6.53
152 153 1.580132 GCAGCAACGTAAATCGCCG 60.580 57.895 0.00 0.00 44.19 6.46
153 154 0.521242 CTGCAGCAACGTAAATCGCC 60.521 55.000 0.00 0.00 44.19 5.54
154 155 0.521242 CCTGCAGCAACGTAAATCGC 60.521 55.000 8.66 0.00 44.19 4.58
155 156 1.061131 CTCCTGCAGCAACGTAAATCG 59.939 52.381 8.66 0.00 46.00 3.34
156 157 2.813779 CTCCTGCAGCAACGTAAATC 57.186 50.000 8.66 0.00 0.00 2.17
169 170 0.179062 AGGAATCGTCATGCTCCTGC 60.179 55.000 0.00 0.00 36.92 4.85
170 171 2.208431 GAAGGAATCGTCATGCTCCTG 58.792 52.381 0.00 0.00 38.34 3.86
171 172 1.833630 TGAAGGAATCGTCATGCTCCT 59.166 47.619 0.00 0.00 40.10 3.69
172 173 2.315925 TGAAGGAATCGTCATGCTCC 57.684 50.000 0.00 0.00 0.00 4.70
173 174 2.031437 GCTTGAAGGAATCGTCATGCTC 59.969 50.000 12.82 0.00 43.60 4.26
174 175 2.012673 GCTTGAAGGAATCGTCATGCT 58.987 47.619 12.82 0.00 43.60 3.79
175 176 1.739466 TGCTTGAAGGAATCGTCATGC 59.261 47.619 13.06 13.06 45.47 4.06
176 177 4.161333 GTTTGCTTGAAGGAATCGTCATG 58.839 43.478 0.00 0.00 31.86 3.07
177 178 3.820467 TGTTTGCTTGAAGGAATCGTCAT 59.180 39.130 0.00 0.00 31.86 3.06
178 179 3.003275 GTGTTTGCTTGAAGGAATCGTCA 59.997 43.478 0.00 0.00 0.00 4.35
179 180 3.555518 GTGTTTGCTTGAAGGAATCGTC 58.444 45.455 0.00 0.00 0.00 4.20
180 181 2.032030 CGTGTTTGCTTGAAGGAATCGT 60.032 45.455 0.00 0.00 0.00 3.73
181 182 2.574322 CGTGTTTGCTTGAAGGAATCG 58.426 47.619 0.00 2.85 0.00 3.34
182 183 2.922335 GCCGTGTTTGCTTGAAGGAATC 60.922 50.000 0.00 0.07 0.00 2.52
183 184 1.000274 GCCGTGTTTGCTTGAAGGAAT 60.000 47.619 0.00 0.00 0.00 3.01
184 185 0.383949 GCCGTGTTTGCTTGAAGGAA 59.616 50.000 0.00 0.00 0.00 3.36
185 186 1.781025 CGCCGTGTTTGCTTGAAGGA 61.781 55.000 0.00 0.00 0.00 3.36
186 187 1.370414 CGCCGTGTTTGCTTGAAGG 60.370 57.895 0.00 0.00 0.00 3.46
187 188 0.238289 ATCGCCGTGTTTGCTTGAAG 59.762 50.000 0.00 0.00 0.00 3.02
188 189 0.665835 AATCGCCGTGTTTGCTTGAA 59.334 45.000 0.00 0.00 0.00 2.69
189 190 0.665835 AAATCGCCGTGTTTGCTTGA 59.334 45.000 0.00 0.00 0.00 3.02
190 191 1.486439 AAAATCGCCGTGTTTGCTTG 58.514 45.000 0.00 0.00 0.00 4.01
191 192 2.124122 GAAAAATCGCCGTGTTTGCTT 58.876 42.857 0.00 0.00 0.00 3.91
192 193 1.066303 TGAAAAATCGCCGTGTTTGCT 59.934 42.857 0.00 0.00 0.00 3.91
193 194 1.189227 GTGAAAAATCGCCGTGTTTGC 59.811 47.619 0.00 0.00 0.00 3.68
194 195 1.446465 CGTGAAAAATCGCCGTGTTTG 59.554 47.619 0.00 0.00 0.00 2.93
195 196 1.598430 CCGTGAAAAATCGCCGTGTTT 60.598 47.619 0.00 0.00 0.00 2.83
196 197 0.040781 CCGTGAAAAATCGCCGTGTT 60.041 50.000 0.00 0.00 0.00 3.32
197 198 1.572447 CCGTGAAAAATCGCCGTGT 59.428 52.632 0.00 0.00 0.00 4.49
198 199 1.795962 GCCGTGAAAAATCGCCGTG 60.796 57.895 0.00 0.00 0.00 4.94
199 200 1.582610 ATGCCGTGAAAAATCGCCGT 61.583 50.000 0.00 0.00 0.00 5.68
200 201 0.375454 TATGCCGTGAAAAATCGCCG 59.625 50.000 0.00 0.00 0.00 6.46
201 202 2.553079 TTATGCCGTGAAAAATCGCC 57.447 45.000 0.00 0.00 0.00 5.54
202 203 3.060230 GGTTTTATGCCGTGAAAAATCGC 59.940 43.478 0.00 0.00 0.00 4.58
203 204 3.610677 GGGTTTTATGCCGTGAAAAATCG 59.389 43.478 0.00 0.00 0.00 3.34
204 205 4.816392 AGGGTTTTATGCCGTGAAAAATC 58.184 39.130 0.00 0.00 0.00 2.17
205 206 4.882842 AGGGTTTTATGCCGTGAAAAAT 57.117 36.364 0.00 0.00 0.00 1.82
206 207 4.674281 AAGGGTTTTATGCCGTGAAAAA 57.326 36.364 0.00 0.00 0.00 1.94
207 208 4.501743 GGAAAGGGTTTTATGCCGTGAAAA 60.502 41.667 0.00 0.00 0.00 2.29
208 209 3.006003 GGAAAGGGTTTTATGCCGTGAAA 59.994 43.478 0.00 0.00 0.00 2.69
209 210 2.559231 GGAAAGGGTTTTATGCCGTGAA 59.441 45.455 0.00 0.00 0.00 3.18
210 211 2.164338 GGAAAGGGTTTTATGCCGTGA 58.836 47.619 0.00 0.00 0.00 4.35
211 212 2.163613 GAGGAAAGGGTTTTATGCCGTG 59.836 50.000 0.00 0.00 0.00 4.94
212 213 2.443416 GAGGAAAGGGTTTTATGCCGT 58.557 47.619 0.00 0.00 0.00 5.68
213 214 1.749063 GGAGGAAAGGGTTTTATGCCG 59.251 52.381 0.00 0.00 0.00 5.69
214 215 2.108168 GGGAGGAAAGGGTTTTATGCC 58.892 52.381 0.00 0.00 0.00 4.40
215 216 2.760650 CTGGGAGGAAAGGGTTTTATGC 59.239 50.000 0.00 0.00 0.00 3.14
216 217 4.316025 TCTGGGAGGAAAGGGTTTTATG 57.684 45.455 0.00 0.00 0.00 1.90
217 218 5.084519 GTTTCTGGGAGGAAAGGGTTTTAT 58.915 41.667 0.00 0.00 36.12 1.40
218 219 4.169264 AGTTTCTGGGAGGAAAGGGTTTTA 59.831 41.667 0.00 0.00 36.12 1.52
219 220 3.052109 AGTTTCTGGGAGGAAAGGGTTTT 60.052 43.478 0.00 0.00 36.12 2.43
220 221 2.518407 AGTTTCTGGGAGGAAAGGGTTT 59.482 45.455 0.00 0.00 36.12 3.27
221 222 2.144450 AGTTTCTGGGAGGAAAGGGTT 58.856 47.619 0.00 0.00 36.12 4.11
222 223 1.425448 CAGTTTCTGGGAGGAAAGGGT 59.575 52.381 0.00 0.00 36.12 4.34
223 224 1.888391 GCAGTTTCTGGGAGGAAAGGG 60.888 57.143 0.00 0.00 36.12 3.95
224 225 1.202927 TGCAGTTTCTGGGAGGAAAGG 60.203 52.381 0.00 0.00 36.12 3.11
225 226 2.276732 TGCAGTTTCTGGGAGGAAAG 57.723 50.000 0.00 0.00 36.12 2.62
226 227 2.892852 CAATGCAGTTTCTGGGAGGAAA 59.107 45.455 0.00 0.00 33.47 3.13
227 228 2.158475 ACAATGCAGTTTCTGGGAGGAA 60.158 45.455 0.00 0.00 31.21 3.36
228 229 1.425066 ACAATGCAGTTTCTGGGAGGA 59.575 47.619 0.00 0.00 31.21 3.71
229 230 1.542915 CACAATGCAGTTTCTGGGAGG 59.457 52.381 0.00 0.00 31.21 4.30
230 231 2.233271 ACACAATGCAGTTTCTGGGAG 58.767 47.619 0.00 0.00 31.21 4.30
231 232 2.363306 ACACAATGCAGTTTCTGGGA 57.637 45.000 0.00 0.00 31.21 4.37
232 233 3.457610 AAACACAATGCAGTTTCTGGG 57.542 42.857 0.00 0.00 32.90 4.45
233 234 3.974401 CGTAAACACAATGCAGTTTCTGG 59.026 43.478 5.19 0.00 38.71 3.86
234 235 4.843147 TCGTAAACACAATGCAGTTTCTG 58.157 39.130 5.19 1.11 38.71 3.02
235 236 5.295787 TCTTCGTAAACACAATGCAGTTTCT 59.704 36.000 5.19 0.00 38.71 2.52
236 237 5.507077 TCTTCGTAAACACAATGCAGTTTC 58.493 37.500 5.19 0.00 38.71 2.78
237 238 5.493133 TCTTCGTAAACACAATGCAGTTT 57.507 34.783 6.96 6.96 40.68 2.66
238 239 5.493133 TTCTTCGTAAACACAATGCAGTT 57.507 34.783 0.00 0.00 0.00 3.16
239 240 5.493133 TTTCTTCGTAAACACAATGCAGT 57.507 34.783 0.00 0.00 0.00 4.40
240 241 5.281376 CGATTTCTTCGTAAACACAATGCAG 59.719 40.000 0.00 0.00 43.01 4.41
241 242 5.143660 CGATTTCTTCGTAAACACAATGCA 58.856 37.500 0.00 0.00 43.01 3.96
242 243 5.649430 CGATTTCTTCGTAAACACAATGC 57.351 39.130 0.00 0.00 43.01 3.56
264 265 0.726452 TTTTTCATAACGCGCGTGGC 60.726 50.000 38.44 0.00 38.69 5.01
265 266 3.369701 TTTTTCATAACGCGCGTGG 57.630 47.368 38.44 27.48 0.00 4.94
280 281 6.664515 TGCGAACGTTCTTATGATTCTTTTT 58.335 32.000 24.80 0.00 0.00 1.94
281 282 6.147164 TCTGCGAACGTTCTTATGATTCTTTT 59.853 34.615 24.80 0.00 0.00 2.27
282 283 5.637810 TCTGCGAACGTTCTTATGATTCTTT 59.362 36.000 24.80 0.00 0.00 2.52
283 284 5.168569 TCTGCGAACGTTCTTATGATTCTT 58.831 37.500 24.80 0.00 0.00 2.52
284 285 4.744570 TCTGCGAACGTTCTTATGATTCT 58.255 39.130 24.80 0.00 0.00 2.40
285 286 5.427082 CATCTGCGAACGTTCTTATGATTC 58.573 41.667 24.80 0.00 0.00 2.52
286 287 4.271049 CCATCTGCGAACGTTCTTATGATT 59.729 41.667 24.80 2.46 0.00 2.57
287 288 3.804325 CCATCTGCGAACGTTCTTATGAT 59.196 43.478 24.80 18.08 0.00 2.45
288 289 3.186909 CCATCTGCGAACGTTCTTATGA 58.813 45.455 24.80 16.82 0.00 2.15
289 290 2.930040 ACCATCTGCGAACGTTCTTATG 59.070 45.455 24.80 19.53 0.00 1.90
290 291 3.247006 ACCATCTGCGAACGTTCTTAT 57.753 42.857 24.80 10.47 0.00 1.73
291 292 2.736144 ACCATCTGCGAACGTTCTTA 57.264 45.000 24.80 12.94 0.00 2.10
292 293 2.736144 TACCATCTGCGAACGTTCTT 57.264 45.000 24.80 3.13 0.00 2.52
293 294 2.481449 GGATACCATCTGCGAACGTTCT 60.481 50.000 24.80 7.15 0.00 3.01
294 295 1.859080 GGATACCATCTGCGAACGTTC 59.141 52.381 18.47 18.47 0.00 3.95
295 296 1.480954 AGGATACCATCTGCGAACGTT 59.519 47.619 0.00 0.00 37.17 3.99
296 297 1.112113 AGGATACCATCTGCGAACGT 58.888 50.000 0.00 0.00 37.17 3.99
297 298 2.128035 GAAGGATACCATCTGCGAACG 58.872 52.381 0.00 0.00 37.17 3.95
298 299 3.181475 TGAGAAGGATACCATCTGCGAAC 60.181 47.826 0.24 0.00 33.74 3.95
299 300 3.031013 TGAGAAGGATACCATCTGCGAA 58.969 45.455 0.24 0.00 33.74 4.70
300 301 2.625314 CTGAGAAGGATACCATCTGCGA 59.375 50.000 0.24 0.00 33.74 5.10
301 302 2.363680 ACTGAGAAGGATACCATCTGCG 59.636 50.000 0.24 0.00 33.74 5.18
302 303 3.386078 TCACTGAGAAGGATACCATCTGC 59.614 47.826 0.24 0.00 33.74 4.26
303 304 5.105187 TGTTCACTGAGAAGGATACCATCTG 60.105 44.000 0.24 0.00 36.78 2.90
304 305 5.026121 TGTTCACTGAGAAGGATACCATCT 58.974 41.667 0.00 0.00 36.78 2.90
305 306 5.344743 TGTTCACTGAGAAGGATACCATC 57.655 43.478 0.00 0.00 36.78 3.51
306 307 5.965033 ATGTTCACTGAGAAGGATACCAT 57.035 39.130 0.00 0.00 36.78 3.55
307 308 5.338381 GGAATGTTCACTGAGAAGGATACCA 60.338 44.000 0.00 0.00 36.78 3.25
308 309 5.119694 GGAATGTTCACTGAGAAGGATACC 58.880 45.833 0.00 0.00 36.78 2.73
309 310 5.582665 GTGGAATGTTCACTGAGAAGGATAC 59.417 44.000 0.00 0.00 36.78 2.24
310 311 5.485353 AGTGGAATGTTCACTGAGAAGGATA 59.515 40.000 0.00 0.00 43.07 2.59
311 312 4.288105 AGTGGAATGTTCACTGAGAAGGAT 59.712 41.667 0.00 0.00 43.07 3.24
312 313 3.648067 AGTGGAATGTTCACTGAGAAGGA 59.352 43.478 0.00 0.00 43.07 3.36
313 314 4.013267 AGTGGAATGTTCACTGAGAAGG 57.987 45.455 0.00 0.00 43.07 3.46
320 321 1.901591 CAGCCAGTGGAATGTTCACT 58.098 50.000 15.20 0.00 45.29 3.41
321 322 0.242017 GCAGCCAGTGGAATGTTCAC 59.758 55.000 15.20 0.00 35.51 3.18
322 323 0.111061 AGCAGCCAGTGGAATGTTCA 59.889 50.000 15.20 0.00 0.00 3.18
323 324 0.524862 CAGCAGCCAGTGGAATGTTC 59.475 55.000 15.20 0.00 0.00 3.18
324 325 1.530013 GCAGCAGCCAGTGGAATGTT 61.530 55.000 15.20 5.81 33.58 2.71
325 326 1.975407 GCAGCAGCCAGTGGAATGT 60.975 57.895 15.20 0.00 33.58 2.71
326 327 2.882876 GCAGCAGCCAGTGGAATG 59.117 61.111 15.20 11.95 33.58 2.67
327 328 2.749044 CGCAGCAGCCAGTGGAAT 60.749 61.111 15.20 0.00 37.52 3.01
337 338 3.832237 AACACAGGGACCGCAGCAG 62.832 63.158 0.00 0.00 0.00 4.24
338 339 2.902423 AAAACACAGGGACCGCAGCA 62.902 55.000 0.00 0.00 0.00 4.41
339 340 1.734388 AAAAACACAGGGACCGCAGC 61.734 55.000 0.00 0.00 0.00 5.25
340 341 2.414750 AAAAACACAGGGACCGCAG 58.585 52.632 0.00 0.00 0.00 5.18
341 342 4.668151 AAAAACACAGGGACCGCA 57.332 50.000 0.00 0.00 0.00 5.69
381 382 1.362355 CAAAAACACAGGGACCGCC 59.638 57.895 0.00 0.00 0.00 6.13
382 383 1.362355 CCAAAAACACAGGGACCGC 59.638 57.895 0.00 0.00 0.00 5.68
383 384 1.605232 GTACCAAAAACACAGGGACCG 59.395 52.381 0.00 0.00 29.60 4.79
384 385 2.657143 TGTACCAAAAACACAGGGACC 58.343 47.619 0.00 0.00 35.29 4.46
385 386 4.822896 TGTATGTACCAAAAACACAGGGAC 59.177 41.667 0.00 0.00 36.76 4.46
386 387 4.822896 GTGTATGTACCAAAAACACAGGGA 59.177 41.667 0.00 0.00 40.08 4.20
387 388 4.580995 TGTGTATGTACCAAAAACACAGGG 59.419 41.667 2.68 0.00 43.90 4.45
388 389 5.759506 TGTGTATGTACCAAAAACACAGG 57.240 39.130 2.68 0.00 43.90 4.00
391 392 6.430000 AGGAGATGTGTATGTACCAAAAACAC 59.570 38.462 0.00 0.00 40.61 3.32
392 393 6.539173 AGGAGATGTGTATGTACCAAAAACA 58.461 36.000 0.00 0.00 0.00 2.83
393 394 7.448748 AAGGAGATGTGTATGTACCAAAAAC 57.551 36.000 0.00 0.00 0.00 2.43
394 395 7.040062 CCAAAGGAGATGTGTATGTACCAAAAA 60.040 37.037 0.00 0.00 0.00 1.94
395 396 6.432783 CCAAAGGAGATGTGTATGTACCAAAA 59.567 38.462 0.00 0.00 0.00 2.44
396 397 5.943416 CCAAAGGAGATGTGTATGTACCAAA 59.057 40.000 0.00 0.00 0.00 3.28
397 398 5.496556 CCAAAGGAGATGTGTATGTACCAA 58.503 41.667 0.00 0.00 0.00 3.67
398 399 4.625324 GCCAAAGGAGATGTGTATGTACCA 60.625 45.833 0.00 0.00 0.00 3.25
399 400 3.877508 GCCAAAGGAGATGTGTATGTACC 59.122 47.826 0.00 0.00 0.00 3.34
400 401 3.877508 GGCCAAAGGAGATGTGTATGTAC 59.122 47.826 0.00 0.00 0.00 2.90
401 402 3.118038 GGGCCAAAGGAGATGTGTATGTA 60.118 47.826 4.39 0.00 0.00 2.29
402 403 2.357154 GGGCCAAAGGAGATGTGTATGT 60.357 50.000 4.39 0.00 0.00 2.29
403 404 2.301346 GGGCCAAAGGAGATGTGTATG 58.699 52.381 4.39 0.00 0.00 2.39
404 405 1.134098 CGGGCCAAAGGAGATGTGTAT 60.134 52.381 4.39 0.00 0.00 2.29
405 406 0.251916 CGGGCCAAAGGAGATGTGTA 59.748 55.000 4.39 0.00 0.00 2.90
406 407 1.002134 CGGGCCAAAGGAGATGTGT 60.002 57.895 4.39 0.00 0.00 3.72
407 408 1.026718 GTCGGGCCAAAGGAGATGTG 61.027 60.000 4.39 0.00 0.00 3.21
408 409 1.299976 GTCGGGCCAAAGGAGATGT 59.700 57.895 4.39 0.00 0.00 3.06
409 410 0.322456 TTGTCGGGCCAAAGGAGATG 60.322 55.000 4.39 0.00 0.00 2.90
410 411 0.404040 TTTGTCGGGCCAAAGGAGAT 59.596 50.000 4.39 0.00 31.06 2.75
411 412 0.183971 TTTTGTCGGGCCAAAGGAGA 59.816 50.000 4.39 0.00 35.85 3.71
412 413 1.256812 ATTTTGTCGGGCCAAAGGAG 58.743 50.000 4.39 0.00 35.85 3.69
413 414 1.342819 CAATTTTGTCGGGCCAAAGGA 59.657 47.619 4.39 0.00 35.85 3.36
414 415 1.342819 TCAATTTTGTCGGGCCAAAGG 59.657 47.619 4.39 0.00 35.85 3.11
415 416 2.403259 GTCAATTTTGTCGGGCCAAAG 58.597 47.619 4.39 0.00 35.85 2.77
416 417 1.069358 GGTCAATTTTGTCGGGCCAAA 59.931 47.619 4.39 0.00 32.70 3.28
450 453 1.141234 CTTCTTCCCGACGGCTACC 59.859 63.158 8.86 0.00 0.00 3.18
484 488 4.444838 TTCGGATGGCGTGGTCGG 62.445 66.667 0.00 0.00 37.56 4.79
492 496 0.181350 ATCTGGAACCTTCGGATGGC 59.819 55.000 9.67 0.00 0.00 4.40
496 500 1.198094 TGGCATCTGGAACCTTCGGA 61.198 55.000 0.00 0.00 0.00 4.55
569 573 0.752009 TCGTAGCTGGCCTACTCAGG 60.752 60.000 3.32 0.00 43.48 3.86
571 575 1.681793 GATTCGTAGCTGGCCTACTCA 59.318 52.381 3.32 0.00 43.48 3.41
572 576 1.335142 CGATTCGTAGCTGGCCTACTC 60.335 57.143 3.32 0.00 43.48 2.59
573 577 0.669077 CGATTCGTAGCTGGCCTACT 59.331 55.000 3.32 3.44 43.48 2.57
574 578 0.384669 ACGATTCGTAGCTGGCCTAC 59.615 55.000 10.53 0.00 42.47 3.18
577 581 1.153628 ACACGATTCGTAGCTGGCC 60.154 57.895 11.99 0.00 38.32 5.36
579 583 1.742900 CGCACACGATTCGTAGCTGG 61.743 60.000 24.11 11.48 43.93 4.85
580 584 1.625870 CGCACACGATTCGTAGCTG 59.374 57.895 24.11 15.83 43.93 4.24
581 585 2.158959 GCGCACACGATTCGTAGCT 61.159 57.895 24.11 0.00 43.93 3.32
582 586 2.316687 GCGCACACGATTCGTAGC 59.683 61.111 19.78 19.78 43.93 3.58
583 587 2.845739 CGGCGCACACGATTCGTAG 61.846 63.158 11.99 8.77 43.93 3.51
584 588 2.877113 CGGCGCACACGATTCGTA 60.877 61.111 11.99 0.00 43.93 3.43
659 663 9.893634 TCGGAAAGTAGGATTATTATTTCAACA 57.106 29.630 0.00 0.00 0.00 3.33
707 923 8.789767 TCCTAGTACAGTAGTAGTACCAGTAT 57.210 38.462 17.77 2.69 42.09 2.12
724 940 6.203647 ACGCAATTGTTTTTGTTCCTAGTAC 58.796 36.000 7.40 0.00 0.00 2.73
725 941 6.380095 ACGCAATTGTTTTTGTTCCTAGTA 57.620 33.333 7.40 0.00 0.00 1.82
734 950 4.210328 GGGTTTCCTACGCAATTGTTTTTG 59.790 41.667 7.40 0.00 39.38 2.44
737 953 2.030628 CGGGTTTCCTACGCAATTGTTT 60.031 45.455 7.40 0.00 39.54 2.83
977 1230 3.123244 TAGGGGGTATGGGGGAGGC 62.123 68.421 0.00 0.00 0.00 4.70
980 1233 2.740317 GGGTAGGGGGTATGGGGGA 61.740 68.421 0.00 0.00 0.00 4.81
985 1238 1.535687 CCTCGGGGTAGGGGGTATG 60.536 68.421 0.00 0.00 32.55 2.39
987 1240 4.162009 GCCTCGGGGTAGGGGGTA 62.162 72.222 1.62 0.00 37.11 3.69
1082 1335 3.209812 CGATCCGAGCCCGTGAGA 61.210 66.667 0.00 0.00 0.00 3.27
1088 1341 4.916314 TCCTCCCGATCCGAGCCC 62.916 72.222 0.00 0.00 0.00 5.19
1090 1343 1.228184 TAGTCCTCCCGATCCGAGC 60.228 63.158 0.00 0.00 0.00 5.03
1091 1344 0.606944 CCTAGTCCTCCCGATCCGAG 60.607 65.000 0.00 0.00 0.00 4.63
1167 1425 2.102252 CCATCCCTCTTTCTCTTCTCCG 59.898 54.545 0.00 0.00 0.00 4.63
1178 1436 1.385206 GAGCCCCTCCATCCCTCTT 60.385 63.158 0.00 0.00 0.00 2.85
1179 1437 2.288643 GAGCCCCTCCATCCCTCT 59.711 66.667 0.00 0.00 0.00 3.69
1379 1658 2.076863 GGACCGTGGACTCTTGAATTG 58.923 52.381 0.00 0.00 0.00 2.32
1388 1667 0.317479 CTTTTCGAGGACCGTGGACT 59.683 55.000 0.00 0.00 39.75 3.85
1412 1692 9.456147 GAGACATCTAGCTAGGACTATAATTCA 57.544 37.037 20.58 0.00 0.00 2.57
1413 1693 9.681062 AGAGACATCTAGCTAGGACTATAATTC 57.319 37.037 20.58 7.42 32.54 2.17
1487 1777 2.285220 AGCACATCAAATACGCGTCATC 59.715 45.455 18.63 0.00 0.00 2.92
1496 1786 6.346096 GGTAACTACAGGAGCACATCAAATA 58.654 40.000 0.00 0.00 0.00 1.40
1502 1792 2.834113 AGGGTAACTACAGGAGCACAT 58.166 47.619 0.00 0.00 0.00 3.21
1511 1801 4.157246 TCTCAAGCAGAAGGGTAACTACA 58.843 43.478 0.00 0.00 0.00 2.74
1544 1834 3.395858 AAGCATCTCGAAAATCTTGCG 57.604 42.857 0.00 0.00 35.34 4.85
1578 1868 5.642063 GTCGACCTCTCAATGAATTTTACCA 59.358 40.000 3.51 0.00 0.00 3.25
1589 1880 2.289694 CCACCTTTGTCGACCTCTCAAT 60.290 50.000 14.12 0.00 0.00 2.57
1592 1883 0.680061 ACCACCTTTGTCGACCTCTC 59.320 55.000 14.12 0.00 0.00 3.20
1593 1884 0.680061 GACCACCTTTGTCGACCTCT 59.320 55.000 14.12 0.00 0.00 3.69
1595 1886 0.680061 GAGACCACCTTTGTCGACCT 59.320 55.000 14.12 0.00 37.80 3.85
1596 1887 0.680061 AGAGACCACCTTTGTCGACC 59.320 55.000 14.12 0.00 37.80 4.79
1597 1888 1.614413 AGAGAGACCACCTTTGTCGAC 59.386 52.381 9.11 9.11 37.80 4.20
1604 1895 0.768221 TTGGCCAGAGAGACCACCTT 60.768 55.000 5.11 0.00 31.83 3.50
1614 1905 1.542492 AAGACATTGCTTGGCCAGAG 58.458 50.000 5.11 8.07 31.49 3.35
1670 1961 1.633561 CAGCACAGGTAGACATGTCG 58.366 55.000 19.85 8.08 39.00 4.35
1704 1995 0.731417 GCTCGAGCATTGCAATCTGT 59.269 50.000 31.91 0.00 41.59 3.41
1724 2015 7.417911 GAAAAGGTTTTCAGGAATCTTCCAACT 60.418 37.037 11.41 0.00 44.39 3.16
1744 2035 5.240844 ACAGAATGGACTAAAACGGAAAAGG 59.759 40.000 0.00 0.00 43.62 3.11
1746 2037 6.702716 AACAGAATGGACTAAAACGGAAAA 57.297 33.333 0.00 0.00 43.62 2.29
1768 2059 1.341156 CCCCCACCAAACTGGCAAAA 61.341 55.000 0.00 0.00 42.67 2.44
1804 2096 5.248640 ACCTTTCATGACCACTTAGACATG 58.751 41.667 0.00 0.00 40.65 3.21
1805 2097 5.013079 TGACCTTTCATGACCACTTAGACAT 59.987 40.000 0.00 0.00 0.00 3.06
1806 2098 4.346709 TGACCTTTCATGACCACTTAGACA 59.653 41.667 0.00 0.00 0.00 3.41
1807 2099 4.894784 TGACCTTTCATGACCACTTAGAC 58.105 43.478 0.00 0.00 0.00 2.59
1808 2100 5.762179 ATGACCTTTCATGACCACTTAGA 57.238 39.130 0.00 0.00 41.23 2.10
1809 2101 5.817816 GGTATGACCTTTCATGACCACTTAG 59.182 44.000 0.00 0.00 42.79 2.18
1849 2146 2.014857 CATGATCTGAACCACAGGCAG 58.985 52.381 0.00 0.00 45.76 4.85
1871 2168 4.518249 GAACAGGGGGAGTATTTCTGAAG 58.482 47.826 0.00 0.00 0.00 3.02
1935 2233 4.497984 ACAGCACACGGCCACCAA 62.498 61.111 2.24 0.00 46.50 3.67
1936 2234 4.497984 AACAGCACACGGCCACCA 62.498 61.111 2.24 0.00 46.50 4.17
1949 2247 3.398406 GGTTAAATTGCCCACCAAACAG 58.602 45.455 0.00 0.00 36.92 3.16
1950 2248 2.104963 GGGTTAAATTGCCCACCAAACA 59.895 45.455 7.82 0.00 44.23 2.83
2030 2328 4.587189 GTAGTAGCGCGGCCCCTG 62.587 72.222 8.83 0.00 0.00 4.45
2033 2331 4.197498 TTCGTAGTAGCGCGGCCC 62.197 66.667 8.83 0.00 0.00 5.80
2034 2332 2.953303 GTTCGTAGTAGCGCGGCC 60.953 66.667 8.83 0.00 0.00 6.13
2035 2333 3.310251 CGTTCGTAGTAGCGCGGC 61.310 66.667 8.83 0.00 0.00 6.53
2036 2334 2.649975 CCGTTCGTAGTAGCGCGG 60.650 66.667 8.83 0.00 33.03 6.46
2037 2335 2.035617 TACCCGTTCGTAGTAGCGCG 62.036 60.000 0.00 0.00 0.00 6.86
2038 2336 0.098728 TTACCCGTTCGTAGTAGCGC 59.901 55.000 0.00 0.00 0.00 5.92
2039 2337 2.763249 ATTACCCGTTCGTAGTAGCG 57.237 50.000 0.00 0.00 0.00 4.26
2040 2338 4.972440 CACTTATTACCCGTTCGTAGTAGC 59.028 45.833 0.00 0.00 0.00 3.58
2041 2339 4.972440 GCACTTATTACCCGTTCGTAGTAG 59.028 45.833 0.00 0.00 0.00 2.57
2042 2340 4.397730 TGCACTTATTACCCGTTCGTAGTA 59.602 41.667 0.00 0.00 0.00 1.82
2061 2359 0.322187 AATTACCCCCTCACGTGCAC 60.322 55.000 11.67 6.82 0.00 4.57
2084 2382 4.443034 GGCACCATTTACTCGAGTATCCTT 60.443 45.833 25.17 8.42 0.00 3.36
2096 2394 2.676342 CCTAACTCGTGGCACCATTTAC 59.324 50.000 12.86 0.00 0.00 2.01
2104 2402 1.987855 CCCCTCCTAACTCGTGGCA 60.988 63.158 0.00 0.00 0.00 4.92
2119 2417 7.722728 CCTAGGTATATTTTCCAAAACTACCCC 59.277 40.741 15.46 3.24 38.76 4.95
2160 2458 6.347402 CGTTCCGAATTTATATGGTGGCTTAG 60.347 42.308 0.00 0.00 0.00 2.18
2161 2459 5.467399 CGTTCCGAATTTATATGGTGGCTTA 59.533 40.000 0.00 0.00 0.00 3.09
2163 2461 3.813166 CGTTCCGAATTTATATGGTGGCT 59.187 43.478 0.00 0.00 0.00 4.75
2164 2462 3.058501 CCGTTCCGAATTTATATGGTGGC 60.059 47.826 0.00 0.00 0.00 5.01
2165 2463 4.382291 TCCGTTCCGAATTTATATGGTGG 58.618 43.478 0.00 0.00 0.00 4.61
2166 2464 4.451096 CCTCCGTTCCGAATTTATATGGTG 59.549 45.833 0.00 0.00 0.00 4.17
2167 2465 4.504340 CCCTCCGTTCCGAATTTATATGGT 60.504 45.833 0.00 0.00 0.00 3.55
2168 2466 4.000988 CCCTCCGTTCCGAATTTATATGG 58.999 47.826 0.00 0.00 0.00 2.74
2177 2639 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30
2188 2650 2.041216 ACCCAAATGACAACCTACTCCC 59.959 50.000 0.00 0.00 0.00 4.30
2222 2684 7.616935 AGACATTCCAAAGAACATATTGATGGT 59.383 33.333 0.00 0.00 37.39 3.55
2387 2853 1.064017 ACCAAACTTGCCCAACAGAGA 60.064 47.619 0.00 0.00 0.00 3.10
2397 2863 1.355005 AAACGCACAACCAAACTTGC 58.645 45.000 0.00 0.00 0.00 4.01
2433 2899 4.463539 ACCAAATGCACAGCAGATTTCATA 59.536 37.500 0.00 0.00 43.65 2.15
2649 3120 5.029474 ACTCTTAGCCTTTCTCCTCTTGAT 58.971 41.667 0.00 0.00 0.00 2.57
2935 3407 6.207213 GGATCAGCAGATAAAGCAAGAATTG 58.793 40.000 0.00 0.00 41.49 2.32
2961 3433 9.933723 AAACAAGAAATGGAAAGAATAAGATGG 57.066 29.630 0.00 0.00 0.00 3.51
2987 3459 7.523293 TTTCTTTTCAATGTCATGCCTCTAA 57.477 32.000 0.00 0.00 0.00 2.10
3099 3571 9.692325 AAGACCTAGAATTTTTAATGAGCTCAT 57.308 29.630 23.75 23.75 38.41 2.90
3192 3672 1.873698 TCAACCACAGTTTCTACGGC 58.126 50.000 0.00 0.00 32.45 5.68
3194 3674 7.597743 ACTTATACTTCAACCACAGTTTCTACG 59.402 37.037 0.00 0.00 32.45 3.51
3222 3730 7.526918 AGGAAGAGGGATTTCTTTTACTCAAA 58.473 34.615 0.00 0.00 37.53 2.69
3233 3741 8.710239 AGATAGAAAGTAAGGAAGAGGGATTTC 58.290 37.037 0.00 0.00 0.00 2.17
3258 3768 5.955355 TCCCCCAAAAAGGTGATTAACATAG 59.045 40.000 0.00 0.00 34.66 2.23
3259 3769 5.905088 TCCCCCAAAAAGGTGATTAACATA 58.095 37.500 0.00 0.00 34.66 2.29
3260 3770 4.757692 TCCCCCAAAAAGGTGATTAACAT 58.242 39.130 0.00 0.00 34.66 2.71
3261 3771 4.156477 CTCCCCCAAAAAGGTGATTAACA 58.844 43.478 0.00 0.00 34.66 2.41
3417 3938 5.237815 CCATGTTACAGCAGAGAACTACAA 58.762 41.667 0.00 0.00 0.00 2.41
3433 3954 8.219178 TGTTAACTCCTTAAGAAACCCATGTTA 58.781 33.333 3.36 0.00 33.30 2.41
3437 3958 7.947890 TCATTGTTAACTCCTTAAGAAACCCAT 59.052 33.333 3.36 0.00 31.02 4.00
3586 4115 7.065803 CACAAAGTACAGGTGGAAATATACAGG 59.934 40.741 0.00 0.00 0.00 4.00
3746 4275 1.584308 GACGAGCTACAGTTTCATCGC 59.416 52.381 0.00 0.00 33.67 4.58
3886 4415 5.739752 TTGCAATGGTTTCTCGATCTATG 57.260 39.130 0.00 0.00 0.00 2.23
4328 4859 4.652421 AGCATGCAAATATTTCAGGGATGT 59.348 37.500 21.98 0.00 31.06 3.06
4384 4915 5.637127 TGATACAGAAGGGACGGTATCATA 58.363 41.667 14.06 0.00 45.35 2.15
4574 5105 6.488683 CCTACAGTGTGTAATTTCCCTTCAAA 59.511 38.462 5.88 0.00 31.67 2.69
4690 5221 5.419542 TGGACTACATACAGACTGAAATGC 58.580 41.667 10.08 0.54 0.00 3.56
4732 5263 3.510360 TCCCTCCGCTCACTATTATAAGC 59.490 47.826 0.00 0.00 0.00 3.09
4746 5277 0.606604 TTCAACAGTACTCCCTCCGC 59.393 55.000 0.00 0.00 0.00 5.54
4795 5326 5.767168 AGTAGAGCATGCCTCAATTTTATCC 59.233 40.000 15.66 0.00 43.31 2.59
5166 5697 5.477984 TGATTCATAATATCCTTTGCCTGGC 59.522 40.000 12.87 12.87 0.00 4.85
5308 5839 9.733556 TGAGTAATCTGGTAAAATTACACACAT 57.266 29.630 5.74 0.00 39.65 3.21
5386 5917 4.426704 AGGTGTAGACTTACCCATCAAGT 58.573 43.478 5.27 0.00 38.92 3.16
5522 6053 1.534163 CACTGAGCACTGTGTTCATGG 59.466 52.381 24.32 17.09 37.00 3.66
5632 6163 2.381911 AGATGCATAAACCAAGGGCAG 58.618 47.619 0.00 0.00 37.96 4.85
5866 6397 8.451908 AGAAATCATAGAAGAAAAATACCCCG 57.548 34.615 0.00 0.00 0.00 5.73
5914 6445 4.758688 TCATATGTGCATCTTTGACGTCT 58.241 39.130 17.92 0.00 0.00 4.18
6052 6628 3.094661 AAGTGTGTGTGTGTGCGCG 62.095 57.895 0.00 0.00 0.00 6.86
6123 6771 2.340721 TTTTGGGAGGGGCATGATTT 57.659 45.000 0.00 0.00 0.00 2.17
6125 6773 2.574074 AATTTTGGGAGGGGCATGAT 57.426 45.000 0.00 0.00 0.00 2.45
6151 6799 0.394216 ATGCGCATTAGGCTTGACCA 60.394 50.000 19.28 0.00 43.14 4.02
6211 6859 3.606595 TTCATCCTGCAACTCTCTCTG 57.393 47.619 0.00 0.00 0.00 3.35
6293 6942 1.551883 GGCATTGCTCCTTCCAACAAT 59.448 47.619 8.82 0.00 33.12 2.71
6295 6944 0.112995 AGGCATTGCTCCTTCCAACA 59.887 50.000 8.82 0.00 0.00 3.33
6350 6999 2.151202 CCACAGGCACAAACGTATCTT 58.849 47.619 0.00 0.00 0.00 2.40
6463 7113 9.522804 CTACAAATGGCTAAACTAAACAAAACA 57.477 29.630 0.00 0.00 0.00 2.83
6492 7142 3.262915 AGAGTAGCTTCCAATCTTGTGCT 59.737 43.478 0.00 0.00 33.94 4.40
6504 7154 6.142818 TGAAGAGCTCAATAGAGTAGCTTC 57.857 41.667 17.77 6.73 46.29 3.86
6535 7185 7.365741 AGTCAAAAACTCAATCATAGTTGCTG 58.634 34.615 0.00 0.00 37.26 4.41
6755 7476 9.767684 CAGAACGCAACAGAATACAAATATAAA 57.232 29.630 0.00 0.00 0.00 1.40
6825 7546 4.158394 GGCAGAAAACAGATCAATAAGGCA 59.842 41.667 0.00 0.00 0.00 4.75
6869 7590 3.832492 TCGATGATGCCCGCGACA 61.832 61.111 8.23 5.84 0.00 4.35
6875 7596 0.179111 TGAACGAGTCGATGATGCCC 60.179 55.000 21.50 0.00 0.00 5.36
6955 7676 6.295011 CCACACAACTTGGAAAATATTGCCTA 60.295 38.462 8.57 1.76 36.02 3.93
6956 7677 5.511202 CCACACAACTTGGAAAATATTGCCT 60.511 40.000 8.57 0.00 36.02 4.75
6957 7678 4.690280 CCACACAACTTGGAAAATATTGCC 59.310 41.667 0.00 0.00 36.02 4.52
6958 7679 4.152223 GCCACACAACTTGGAAAATATTGC 59.848 41.667 0.00 0.00 36.02 3.56
6975 7696 1.523758 CACCTCCTTACAAGCCACAC 58.476 55.000 0.00 0.00 0.00 3.82
7000 7721 1.064621 CTTTTGGCGCGCATATGCT 59.935 52.632 34.42 0.00 39.32 3.79
7063 7784 5.464168 AGTTTTCATCAACTAATGTGCAGC 58.536 37.500 0.00 0.00 35.10 5.25
7144 7866 4.024387 GCCAGTCAACTAGAGTCTCTATCG 60.024 50.000 10.06 2.64 0.00 2.92
7221 7946 1.539827 TGAGTGAAGCGATTGACGAGA 59.460 47.619 0.00 0.00 45.77 4.04
7268 7993 6.317140 TGCAAAACAAAATAAAATCAGCACCA 59.683 30.769 0.00 0.00 0.00 4.17
7270 7995 8.785468 AATGCAAAACAAAATAAAATCAGCAC 57.215 26.923 0.00 0.00 0.00 4.40
7281 8008 5.671742 AGCGCTAAAATGCAAAACAAAAT 57.328 30.435 8.99 0.00 0.00 1.82
7286 8013 3.797909 CCAAAGCGCTAAAATGCAAAAC 58.202 40.909 12.05 0.00 0.00 2.43
7355 8085 5.395642 GCATTTGCAATCAAAGGAAAATGG 58.604 37.500 0.00 0.00 44.19 3.16
7371 8101 3.188460 TGTCCTAAAAGACTCGCATTTGC 59.812 43.478 0.00 0.00 37.66 3.68
7412 8142 4.023365 TGCATAAAATTTGTTGGCCAAAGC 60.023 37.500 22.47 9.72 45.79 3.51
7472 8607 9.941325 AATTTGATATGCCACTTACAAATTTCA 57.059 25.926 0.00 0.00 41.70 2.69
7498 8633 6.432607 TCAGCAAAAATGAATGCAAAAACA 57.567 29.167 0.00 0.00 44.95 2.83
7505 8640 4.917415 ACTACGTTCAGCAAAAATGAATGC 59.083 37.500 0.00 0.00 44.13 3.56
7512 8647 3.930618 CGTCAACTACGTTCAGCAAAAA 58.069 40.909 0.00 0.00 46.72 1.94
7525 8660 0.179156 GGATCGAACGGCGTCAACTA 60.179 55.000 15.17 0.51 41.80 2.24
7532 8667 3.923614 GATCTGGATCGAACGGCG 58.076 61.111 4.80 4.80 42.69 6.46
7544 8679 2.832672 TGTCACGATCTCACGATCTG 57.167 50.000 0.00 0.00 43.14 2.90
7558 8693 2.351544 GGGAGTCTACTCGTGTTGTCAC 60.352 54.545 4.13 0.00 43.76 3.67
7559 8694 1.884579 GGGAGTCTACTCGTGTTGTCA 59.115 52.381 4.13 0.00 43.76 3.58
7590 8725 2.929903 GCATTGGCTTGCGGGTTGA 61.930 57.895 0.00 0.00 36.96 3.18
7601 8736 5.118286 AGCACAATAATAAAAGGCATTGGC 58.882 37.500 1.17 1.17 40.13 4.52
7602 8737 8.891671 AATAGCACAATAATAAAAGGCATTGG 57.108 30.769 0.00 0.00 33.61 3.16
7630 8787 6.928492 ACTTTGCAAAAATACCAAACGATCAT 59.072 30.769 13.84 0.00 0.00 2.45
7632 8789 6.763303 ACTTTGCAAAAATACCAAACGATC 57.237 33.333 13.84 0.00 0.00 3.69
7633 8790 6.643360 GGTACTTTGCAAAAATACCAAACGAT 59.357 34.615 30.18 7.34 36.18 3.73
7634 8791 5.978322 GGTACTTTGCAAAAATACCAAACGA 59.022 36.000 30.18 3.64 36.18 3.85
7639 8798 5.127194 TGTGTGGTACTTTGCAAAAATACCA 59.873 36.000 32.18 32.18 42.31 3.25
7654 8813 0.250727 ACCTGGCACATGTGTGGTAC 60.251 55.000 26.86 13.16 45.72 3.34
7656 8815 0.698238 ATACCTGGCACATGTGTGGT 59.302 50.000 29.01 29.01 45.72 4.16
7689 8848 8.406730 ACTAGCATTATACTCCTACAAGGTAC 57.593 38.462 0.00 0.00 36.53 3.34
7690 8849 9.512588 GTACTAGCATTATACTCCTACAAGGTA 57.487 37.037 0.00 0.00 36.53 3.08
7691 8850 8.226112 AGTACTAGCATTATACTCCTACAAGGT 58.774 37.037 0.00 0.00 36.53 3.50
7692 8851 8.638629 AGTACTAGCATTATACTCCTACAAGG 57.361 38.462 0.00 0.00 36.46 3.61
7700 8859 6.654161 TCGAAGGGAGTACTAGCATTATACTC 59.346 42.308 0.00 8.33 42.69 2.59
7768 8927 8.784994 CATCCAAAATGTCAAATTGATCCAAAA 58.215 29.630 0.00 0.00 0.00 2.44
7769 8928 7.937942 ACATCCAAAATGTCAAATTGATCCAAA 59.062 29.630 0.00 0.00 0.00 3.28
7770 8929 7.451732 ACATCCAAAATGTCAAATTGATCCAA 58.548 30.769 0.00 0.00 0.00 3.53
7771 8930 7.006865 ACATCCAAAATGTCAAATTGATCCA 57.993 32.000 0.00 0.00 0.00 3.41
7772 8931 9.037737 CATACATCCAAAATGTCAAATTGATCC 57.962 33.333 0.00 0.00 33.76 3.36
7773 8932 9.806203 TCATACATCCAAAATGTCAAATTGATC 57.194 29.630 0.00 0.00 33.76 2.92
7777 8936 9.947433 ACAATCATACATCCAAAATGTCAAATT 57.053 25.926 0.00 0.00 33.76 1.82
7778 8937 9.590451 GACAATCATACATCCAAAATGTCAAAT 57.410 29.630 0.00 0.00 35.82 2.32
7779 8938 8.583296 TGACAATCATACATCCAAAATGTCAAA 58.417 29.630 0.00 0.00 40.94 2.69
7780 8939 8.028354 GTGACAATCATACATCCAAAATGTCAA 58.972 33.333 6.37 0.00 44.11 3.18
7781 8940 7.394077 AGTGACAATCATACATCCAAAATGTCA 59.606 33.333 0.00 0.00 41.44 3.58
7782 8941 7.765307 AGTGACAATCATACATCCAAAATGTC 58.235 34.615 0.00 0.00 36.19 3.06
7783 8942 7.707624 AGTGACAATCATACATCCAAAATGT 57.292 32.000 0.00 0.00 36.13 2.71
7784 8943 9.726232 CTAAGTGACAATCATACATCCAAAATG 57.274 33.333 0.00 0.00 0.00 2.32
7888 9509 2.560981 CAAAGTGGTATTTCCCGCCTTT 59.439 45.455 0.00 0.00 35.52 3.11
7907 9528 2.849942 ACAGCTGTCAGCAACATACAA 58.150 42.857 26.23 0.00 45.56 2.41
7924 9545 4.766891 GGATGAGGATCTTCTCTCCTACAG 59.233 50.000 15.31 0.00 43.29 2.74
7926 9547 4.735369 TGGATGAGGATCTTCTCTCCTAC 58.265 47.826 20.09 3.92 43.29 3.18
7999 9621 7.013083 GTCAGAGCTTCATGGATCAACATATTT 59.987 37.037 0.00 0.00 0.00 1.40
8001 9623 5.996513 GTCAGAGCTTCATGGATCAACATAT 59.003 40.000 0.00 0.00 0.00 1.78
8011 9633 0.907486 TCTGGGTCAGAGCTTCATGG 59.093 55.000 0.00 0.00 35.39 3.66
8014 9636 2.050144 AGTTTCTGGGTCAGAGCTTCA 58.950 47.619 0.00 0.00 41.75 3.02
8092 9714 2.642154 TTTTCCTGCTGGACGGTTTA 57.358 45.000 12.53 0.00 43.06 2.01
8103 9725 0.108472 GAGCCAGCCAATTTTCCTGC 60.108 55.000 0.00 0.00 0.00 4.85
8114 9736 1.744741 GAGCAGACAAGAGCCAGCC 60.745 63.158 0.00 0.00 0.00 4.85
8116 9738 0.607112 TGAGAGCAGACAAGAGCCAG 59.393 55.000 0.00 0.00 0.00 4.85
8117 9739 1.051008 TTGAGAGCAGACAAGAGCCA 58.949 50.000 0.00 0.00 0.00 4.75
8118 9740 1.803555 GTTTGAGAGCAGACAAGAGCC 59.196 52.381 0.00 0.00 0.00 4.70
8119 9741 1.803555 GGTTTGAGAGCAGACAAGAGC 59.196 52.381 0.00 0.00 31.13 4.09
8120 9742 3.399440 AGGTTTGAGAGCAGACAAGAG 57.601 47.619 0.00 0.00 31.13 2.85
8122 9744 3.470709 TGAAGGTTTGAGAGCAGACAAG 58.529 45.455 0.00 0.00 31.13 3.16
8124 9746 3.777106 ATGAAGGTTTGAGAGCAGACA 57.223 42.857 0.00 0.00 31.13 3.41
8199 9842 8.287439 TCTGTTCCAGTTCTGAATGTTAAAAA 57.713 30.769 1.00 0.00 32.61 1.94
8200 9843 7.873719 TCTGTTCCAGTTCTGAATGTTAAAA 57.126 32.000 1.00 0.00 32.61 1.52
8201 9844 7.939039 AGATCTGTTCCAGTTCTGAATGTTAAA 59.061 33.333 0.00 0.00 38.58 1.52
8202 9845 7.453393 AGATCTGTTCCAGTTCTGAATGTTAA 58.547 34.615 0.00 0.00 38.58 2.01
8203 9846 7.009179 AGATCTGTTCCAGTTCTGAATGTTA 57.991 36.000 0.00 0.00 38.58 2.41
8204 9847 5.874093 AGATCTGTTCCAGTTCTGAATGTT 58.126 37.500 0.00 0.00 38.58 2.71
8205 9848 5.495926 AGATCTGTTCCAGTTCTGAATGT 57.504 39.130 0.00 0.00 38.58 2.71
8211 9854 5.396213 GGCTTATCAGATCTGTTCCAGTTCT 60.396 44.000 21.92 0.14 40.03 3.01
8212 9855 4.813697 GGCTTATCAGATCTGTTCCAGTTC 59.186 45.833 21.92 5.70 32.27 3.01
8213 9856 4.472833 AGGCTTATCAGATCTGTTCCAGTT 59.527 41.667 21.92 2.82 32.61 3.16
8214 9857 4.036518 AGGCTTATCAGATCTGTTCCAGT 58.963 43.478 21.92 5.83 32.61 4.00
8215 9858 4.686191 AGGCTTATCAGATCTGTTCCAG 57.314 45.455 21.92 13.72 0.00 3.86



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.