Multiple sequence alignment - TraesCS1A01G306400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G306400 chr1A 100.000 6980 0 0 1 6980 498543103 498536124 0.000000e+00 12890.0
1 TraesCS1A01G306400 chr1A 83.120 468 58 16 3041 3488 498593938 498594404 2.340000e-109 407.0
2 TraesCS1A01G306400 chr1D 88.921 2103 103 52 881 2946 403284663 403282654 0.000000e+00 2473.0
3 TraesCS1A01G306400 chr1D 90.395 937 34 21 5301 6209 403282020 403281112 0.000000e+00 1181.0
4 TraesCS1A01G306400 chr1D 93.554 605 20 6 2980 3584 403282592 403282007 0.000000e+00 883.0
5 TraesCS1A01G306400 chr1D 97.082 377 7 2 6288 6664 403277356 403276984 3.550000e-177 632.0
6 TraesCS1A01G306400 chr1D 84.932 511 50 14 262 772 403285392 403284909 6.290000e-135 492.0
7 TraesCS1A01G306400 chr1D 84.375 320 36 11 3041 3346 403333104 403333423 1.140000e-77 302.0
8 TraesCS1A01G306400 chr1D 87.556 225 17 5 608 832 403288131 403287918 4.180000e-62 250.0
9 TraesCS1A01G306400 chr1D 87.838 222 13 11 6759 6980 403276977 403276770 1.500000e-61 248.0
10 TraesCS1A01G306400 chr1D 94.505 91 3 1 6203 6291 403281091 403281001 9.440000e-29 139.0
11 TraesCS1A01G306400 chr1B 90.129 1945 96 40 1026 2946 542142637 542140765 0.000000e+00 2440.0
12 TraesCS1A01G306400 chr1B 96.593 587 17 3 2954 3538 542140724 542140139 0.000000e+00 970.0
13 TraesCS1A01G306400 chr1B 88.791 678 30 9 5324 5992 542140097 542139457 0.000000e+00 789.0
14 TraesCS1A01G306400 chr1B 83.369 469 54 15 3041 3488 542428835 542429300 5.040000e-111 412.0
15 TraesCS1A01G306400 chr1B 86.164 318 36 6 404 719 542143588 542143277 3.120000e-88 337.0
16 TraesCS1A01G306400 chr1B 87.838 222 13 11 6759 6980 542138757 542138550 1.500000e-61 248.0
17 TraesCS1A01G306400 chr1B 96.599 147 5 0 6518 6664 542138914 542138768 1.940000e-60 244.0
18 TraesCS1A01G306400 chr1B 82.353 170 9 8 6296 6461 542139064 542138912 2.040000e-25 128.0
19 TraesCS1A01G306400 chr1B 90.805 87 6 1 6207 6291 542139236 542139150 1.590000e-21 115.0
20 TraesCS1A01G306400 chr1B 80.000 125 6 8 873 997 542143110 542143005 2.700000e-09 75.0
21 TraesCS1A01G306400 chr1B 97.436 39 1 0 5301 5339 542140142 542140104 4.520000e-07 67.6
22 TraesCS1A01G306400 chr1B 96.970 33 1 0 6413 6445 542139014 542138982 1.000000e-03 56.5
23 TraesCS1A01G306400 chr3D 91.643 1735 102 19 3599 5303 162873711 162875432 0.000000e+00 2361.0
24 TraesCS1A01G306400 chr7A 96.047 1366 45 5 3948 5307 112268365 112267003 0.000000e+00 2215.0
25 TraesCS1A01G306400 chr7A 95.065 1378 51 4 3942 5302 576171642 576170265 0.000000e+00 2152.0
26 TraesCS1A01G306400 chr7A 95.291 1359 54 6 3950 5302 576152031 576150677 0.000000e+00 2146.0
27 TraesCS1A01G306400 chr7A 94.996 1379 47 8 3949 5307 658780662 658782038 0.000000e+00 2145.0
28 TraesCS1A01G306400 chr7A 94.624 1358 65 4 3950 5302 658805547 658806901 0.000000e+00 2097.0
29 TraesCS1A01G306400 chr7A 96.571 350 11 1 3599 3948 658780217 658780565 4.690000e-161 579.0
30 TraesCS1A01G306400 chr7A 93.521 355 21 2 3599 3951 576172082 576171728 1.720000e-145 527.0
31 TraesCS1A01G306400 chr7A 93.976 249 10 5 3599 3845 658791119 658791364 8.550000e-99 372.0
32 TraesCS1A01G306400 chr2A 95.773 1372 41 5 3948 5303 104327283 104325913 0.000000e+00 2196.0
33 TraesCS1A01G306400 chr2A 95.038 262 8 3 3595 3852 104328097 104327837 2.340000e-109 407.0
34 TraesCS1A01G306400 chr2A 94.737 38 2 0 641 678 750586657 750586694 7.560000e-05 60.2
35 TraesCS1A01G306400 chr2A 94.737 38 2 0 641 678 750625120 750625157 7.560000e-05 60.2
36 TraesCS1A01G306400 chr2A 97.143 35 1 0 644 678 750739920 750739886 7.560000e-05 60.2
37 TraesCS1A01G306400 chr5A 95.583 1313 51 4 3995 5303 512710403 512711712 0.000000e+00 2097.0
38 TraesCS1A01G306400 chr7B 94.753 1315 60 8 3995 5303 548473562 548474873 0.000000e+00 2037.0
39 TraesCS1A01G306400 chr7B 93.061 1369 82 10 3942 5302 546379935 546378572 0.000000e+00 1989.0
40 TraesCS1A01G306400 chr6A 96.866 351 11 0 3598 3948 538033269 538033619 7.800000e-164 588.0
41 TraesCS1A01G306400 chr2B 89.420 293 29 2 3603 3895 31474476 31474186 1.110000e-97 368.0
42 TraesCS1A01G306400 chr4D 88.103 311 33 4 3605 3913 29383396 29383088 3.980000e-97 366.0
43 TraesCS1A01G306400 chr3B 89.116 294 30 2 3603 3895 783200406 783200114 1.430000e-96 364.0
44 TraesCS1A01G306400 chr2D 89.796 49 4 1 631 678 619440568 619440616 2.100000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G306400 chr1A 498536124 498543103 6979 True 12890.000000 12890 100.000000 1 6980 1 chr1A.!!$R1 6979
1 TraesCS1A01G306400 chr1D 403276770 403288131 11361 True 787.250000 2473 90.597875 262 6980 8 chr1D.!!$R1 6718
2 TraesCS1A01G306400 chr1B 542138550 542143588 5038 True 497.281818 2440 90.334364 404 6980 11 chr1B.!!$R1 6576
3 TraesCS1A01G306400 chr3D 162873711 162875432 1721 False 2361.000000 2361 91.643000 3599 5303 1 chr3D.!!$F1 1704
4 TraesCS1A01G306400 chr7A 112267003 112268365 1362 True 2215.000000 2215 96.047000 3948 5307 1 chr7A.!!$R1 1359
5 TraesCS1A01G306400 chr7A 576150677 576152031 1354 True 2146.000000 2146 95.291000 3950 5302 1 chr7A.!!$R2 1352
6 TraesCS1A01G306400 chr7A 658805547 658806901 1354 False 2097.000000 2097 94.624000 3950 5302 1 chr7A.!!$F2 1352
7 TraesCS1A01G306400 chr7A 658780217 658782038 1821 False 1362.000000 2145 95.783500 3599 5307 2 chr7A.!!$F3 1708
8 TraesCS1A01G306400 chr7A 576170265 576172082 1817 True 1339.500000 2152 94.293000 3599 5302 2 chr7A.!!$R3 1703
9 TraesCS1A01G306400 chr2A 104325913 104328097 2184 True 1301.500000 2196 95.405500 3595 5303 2 chr2A.!!$R2 1708
10 TraesCS1A01G306400 chr5A 512710403 512711712 1309 False 2097.000000 2097 95.583000 3995 5303 1 chr5A.!!$F1 1308
11 TraesCS1A01G306400 chr7B 548473562 548474873 1311 False 2037.000000 2037 94.753000 3995 5303 1 chr7B.!!$F1 1308
12 TraesCS1A01G306400 chr7B 546378572 546379935 1363 True 1989.000000 1989 93.061000 3942 5302 1 chr7B.!!$R1 1360

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
734 3219 0.188342 AGGGCAATGAGGTGGTTGTT 59.812 50.000 0.00 0.00 0.0 2.83 F
1998 5031 0.097150 GATCGGCAGTTTTCTTCGCC 59.903 55.000 0.00 0.00 41.3 5.54 F
2222 5257 0.188587 TGCGGGAGATCAGGAGGTAT 59.811 55.000 0.00 0.00 0.0 2.73 F
3489 6584 1.751924 AGCTCCTCGTATCTGTTGTCC 59.248 52.381 0.00 0.00 0.0 4.02 F
4189 7762 1.596477 GGTGGATCAGATCTGCGGC 60.596 63.158 18.36 9.03 0.0 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2520 5556 1.269448 CCCCACAGTTCATGGTTTTCG 59.731 52.381 0.00 0.0 35.23 3.46 R
3322 6417 0.169672 CTGGCATGTTTCCTTCTGCG 59.830 55.000 0.00 0.0 35.47 5.18 R
4145 7718 0.178767 CGTGGAGATCATTGGAGCCA 59.821 55.000 0.00 0.0 0.00 4.75 R
4877 8458 1.811965 CCATCATCGTTGCCACAGAAA 59.188 47.619 0.00 0.0 0.00 2.52 R
6095 9799 0.606130 TCAATGGCGCAGTGTGTGAT 60.606 50.000 10.83 0.0 31.07 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 0.524862 GCCAACTGCTGACTCAATGG 59.475 55.000 0.00 0.00 36.87 3.16
22 23 1.901591 CCAACTGCTGACTCAATGGT 58.098 50.000 0.00 0.00 0.00 3.55
24 25 2.030540 CCAACTGCTGACTCAATGGTTG 60.031 50.000 0.00 0.00 34.33 3.77
26 27 2.498167 ACTGCTGACTCAATGGTTGAC 58.502 47.619 0.00 0.00 35.46 3.18
27 28 2.105477 ACTGCTGACTCAATGGTTGACT 59.895 45.455 0.00 0.00 35.46 3.41
28 29 2.740981 CTGCTGACTCAATGGTTGACTC 59.259 50.000 0.00 0.00 35.46 3.36
29 30 2.369860 TGCTGACTCAATGGTTGACTCT 59.630 45.455 0.00 0.00 35.46 3.24
30 31 2.999355 GCTGACTCAATGGTTGACTCTC 59.001 50.000 0.00 0.00 35.46 3.20
32 33 2.972021 TGACTCAATGGTTGACTCTCCA 59.028 45.455 0.00 0.00 35.46 3.86
34 35 3.937706 GACTCAATGGTTGACTCTCCATG 59.062 47.826 6.96 0.00 42.73 3.66
35 36 3.276857 CTCAATGGTTGACTCTCCATGG 58.723 50.000 4.97 4.97 42.73 3.66
38 39 2.566833 TGGTTGACTCTCCATGGTTG 57.433 50.000 12.58 6.40 0.00 3.77
39 40 2.054021 TGGTTGACTCTCCATGGTTGA 58.946 47.619 12.58 10.54 0.00 3.18
40 41 2.224523 TGGTTGACTCTCCATGGTTGAC 60.225 50.000 12.58 4.50 0.00 3.18
41 42 2.427506 GTTGACTCTCCATGGTTGACC 58.572 52.381 12.58 5.22 0.00 4.02
50 51 4.577152 TGGTTGACCAGCCAACTG 57.423 55.556 3.01 0.00 44.24 3.16
81 82 2.853914 GCGTGTCAGCGACCTTTC 59.146 61.111 6.30 0.00 0.00 2.62
82 83 1.664965 GCGTGTCAGCGACCTTTCT 60.665 57.895 6.30 0.00 0.00 2.52
84 85 1.217882 CGTGTCAGCGACCTTTCTTT 58.782 50.000 6.30 0.00 0.00 2.52
85 86 1.597663 CGTGTCAGCGACCTTTCTTTT 59.402 47.619 6.30 0.00 0.00 2.27
86 87 2.031683 CGTGTCAGCGACCTTTCTTTTT 59.968 45.455 6.30 0.00 0.00 1.94
128 129 9.678247 GCATTTTATTTAATTTTTAACCGTCCG 57.322 29.630 0.00 0.00 0.00 4.79
130 131 8.754230 TTTTATTTAATTTTTAACCGTCCGGG 57.246 30.769 10.91 0.00 43.62 5.73
139 140 2.266689 CCGTCCGGGTTAACTGGG 59.733 66.667 0.00 11.75 46.36 4.45
142 143 3.074281 TCCGGGTTAACTGGGCAG 58.926 61.111 0.00 0.00 46.36 4.85
143 144 2.750237 CCGGGTTAACTGGGCAGC 60.750 66.667 5.42 0.00 42.34 5.25
144 145 3.124921 CGGGTTAACTGGGCAGCG 61.125 66.667 5.42 0.00 0.00 5.18
145 146 2.750237 GGGTTAACTGGGCAGCGG 60.750 66.667 5.42 0.00 0.00 5.52
146 147 2.750237 GGTTAACTGGGCAGCGGG 60.750 66.667 5.42 0.00 0.00 6.13
147 148 3.440415 GTTAACTGGGCAGCGGGC 61.440 66.667 0.57 0.57 43.74 6.13
157 158 3.136123 CAGCGGGCCCATTGTCAG 61.136 66.667 24.92 4.06 0.00 3.51
161 162 3.134127 GGGCCCATTGTCAGCGTC 61.134 66.667 19.95 0.00 0.00 5.19
162 163 2.359850 GGCCCATTGTCAGCGTCA 60.360 61.111 0.00 0.00 0.00 4.35
164 165 2.690778 GCCCATTGTCAGCGTCACC 61.691 63.158 0.00 0.00 0.00 4.02
165 166 2.390599 CCCATTGTCAGCGTCACCG 61.391 63.158 0.00 0.00 37.07 4.94
166 167 2.390599 CCATTGTCAGCGTCACCGG 61.391 63.158 0.00 0.00 33.68 5.28
167 168 2.047274 ATTGTCAGCGTCACCGGG 60.047 61.111 6.32 0.00 33.68 5.73
168 169 3.605749 ATTGTCAGCGTCACCGGGG 62.606 63.158 6.32 0.00 33.68 5.73
184 185 4.695791 GGGAGGGGGTGGAAGGGT 62.696 72.222 0.00 0.00 0.00 4.34
185 186 2.457794 GGAGGGGGTGGAAGGGTA 59.542 66.667 0.00 0.00 0.00 3.69
187 188 1.082392 GAGGGGGTGGAAGGGTAGT 59.918 63.158 0.00 0.00 0.00 2.73
188 189 0.549413 GAGGGGGTGGAAGGGTAGTT 60.549 60.000 0.00 0.00 0.00 2.24
189 190 0.801574 AGGGGGTGGAAGGGTAGTTA 59.198 55.000 0.00 0.00 0.00 2.24
190 191 1.372133 AGGGGGTGGAAGGGTAGTTAT 59.628 52.381 0.00 0.00 0.00 1.89
191 192 1.773052 GGGGGTGGAAGGGTAGTTATC 59.227 57.143 0.00 0.00 0.00 1.75
193 194 2.848071 GGGGTGGAAGGGTAGTTATCAA 59.152 50.000 0.00 0.00 0.00 2.57
194 195 3.371273 GGGGTGGAAGGGTAGTTATCAAC 60.371 52.174 0.00 0.00 0.00 3.18
195 196 3.528532 GGTGGAAGGGTAGTTATCAACG 58.471 50.000 0.00 0.00 36.23 4.10
196 197 2.934553 GTGGAAGGGTAGTTATCAACGC 59.065 50.000 0.00 0.00 36.23 4.84
197 198 2.093341 TGGAAGGGTAGTTATCAACGCC 60.093 50.000 0.00 0.00 36.23 5.68
198 199 2.093341 GGAAGGGTAGTTATCAACGCCA 60.093 50.000 7.58 0.00 34.51 5.69
199 200 3.433173 GGAAGGGTAGTTATCAACGCCAT 60.433 47.826 7.58 0.00 34.51 4.40
201 202 5.362105 AAGGGTAGTTATCAACGCCATTA 57.638 39.130 4.62 0.00 35.07 1.90
222 223 1.934463 GGCTAATGACGATGCCACG 59.066 57.895 0.00 0.00 44.34 4.94
238 239 2.097728 CGTCAGCGTCATCGTCGA 59.902 61.111 0.00 0.00 39.49 4.20
239 240 1.511254 CGTCAGCGTCATCGTCGAA 60.511 57.895 0.00 0.00 39.49 3.71
241 242 1.269166 GTCAGCGTCATCGTCGAAAT 58.731 50.000 0.00 0.00 39.49 2.17
242 243 1.654105 GTCAGCGTCATCGTCGAAATT 59.346 47.619 0.00 0.00 39.49 1.82
243 244 2.850060 GTCAGCGTCATCGTCGAAATTA 59.150 45.455 0.00 0.00 39.49 1.40
244 245 3.302434 GTCAGCGTCATCGTCGAAATTAA 59.698 43.478 0.00 0.00 39.49 1.40
246 247 3.303495 CAGCGTCATCGTCGAAATTAACT 59.697 43.478 0.00 0.00 39.49 2.24
247 248 3.546670 AGCGTCATCGTCGAAATTAACTC 59.453 43.478 0.00 0.00 39.49 3.01
248 249 3.301643 GCGTCATCGTCGAAATTAACTCC 60.302 47.826 0.00 0.00 39.49 3.85
249 250 3.855379 CGTCATCGTCGAAATTAACTCCA 59.145 43.478 0.00 0.00 0.00 3.86
250 251 4.325204 CGTCATCGTCGAAATTAACTCCAA 59.675 41.667 0.00 0.00 0.00 3.53
251 252 5.164031 CGTCATCGTCGAAATTAACTCCAAA 60.164 40.000 0.00 0.00 0.00 3.28
253 254 5.350365 TCATCGTCGAAATTAACTCCAAAGG 59.650 40.000 0.00 0.00 0.00 3.11
254 255 4.634199 TCGTCGAAATTAACTCCAAAGGT 58.366 39.130 0.00 0.00 0.00 3.50
256 257 5.634859 TCGTCGAAATTAACTCCAAAGGTAC 59.365 40.000 0.00 0.00 0.00 3.34
257 258 5.163923 CGTCGAAATTAACTCCAAAGGTACC 60.164 44.000 2.73 2.73 0.00 3.34
258 259 4.931002 TCGAAATTAACTCCAAAGGTACCG 59.069 41.667 6.18 0.00 0.00 4.02
259 260 4.931002 CGAAATTAACTCCAAAGGTACCGA 59.069 41.667 6.18 0.00 0.00 4.69
260 261 5.583457 CGAAATTAACTCCAAAGGTACCGAT 59.417 40.000 6.18 0.00 0.00 4.18
261 262 6.238022 CGAAATTAACTCCAAAGGTACCGATC 60.238 42.308 6.18 0.00 0.00 3.69
262 263 4.476628 TTAACTCCAAAGGTACCGATCC 57.523 45.455 6.18 0.00 0.00 3.36
263 264 0.822164 ACTCCAAAGGTACCGATCCG 59.178 55.000 6.18 0.00 0.00 4.18
264 265 1.108776 CTCCAAAGGTACCGATCCGA 58.891 55.000 6.18 0.00 0.00 4.55
266 267 1.901159 TCCAAAGGTACCGATCCGAAA 59.099 47.619 6.18 0.00 0.00 3.46
272 2751 2.004733 GGTACCGATCCGAAAAACCAG 58.995 52.381 0.00 0.00 0.00 4.00
275 2754 0.958382 CCGATCCGAAAAACCAGCCA 60.958 55.000 0.00 0.00 0.00 4.75
295 2774 3.326747 CAGGTAAGGTCCAAGAAAGACG 58.673 50.000 0.00 0.00 34.97 4.18
300 2779 0.599204 GGTCCAAGAAAGACGCACGA 60.599 55.000 0.00 0.00 34.97 4.35
306 2785 0.249489 AGAAAGACGCACGAGCAACT 60.249 50.000 5.50 0.22 42.27 3.16
318 2797 4.702826 GCAACTCGACACGCGCAC 62.703 66.667 5.73 0.00 40.61 5.34
327 2806 4.589700 CACGCGCACGCACAACTT 62.590 61.111 16.04 0.00 45.53 2.66
358 2837 1.268999 GCCACACAAGCGAATGAAACA 60.269 47.619 0.00 0.00 0.00 2.83
368 2847 2.649516 CGAATGAAACAACACACGCAT 58.350 42.857 0.00 0.00 0.00 4.73
370 2849 3.626977 GAATGAAACAACACACGCATGA 58.373 40.909 0.00 0.00 0.00 3.07
382 2861 3.909662 GCATGACGAGGGCAACAT 58.090 55.556 0.00 0.00 39.74 2.71
393 2872 2.024588 GCAACATGCGGCATACGG 59.975 61.111 16.21 6.19 44.51 4.02
395 2874 1.817520 CAACATGCGGCATACGGGA 60.818 57.895 16.21 0.00 44.51 5.14
396 2875 1.817941 AACATGCGGCATACGGGAC 60.818 57.895 16.21 0.00 44.51 4.46
397 2876 2.203001 CATGCGGCATACGGGACA 60.203 61.111 16.21 0.00 44.51 4.02
398 2877 2.108976 ATGCGGCATACGGGACAG 59.891 61.111 14.96 0.00 44.51 3.51
399 2878 2.431454 ATGCGGCATACGGGACAGA 61.431 57.895 14.96 0.00 44.51 3.41
400 2879 2.585247 GCGGCATACGGGACAGAC 60.585 66.667 0.00 0.00 44.51 3.51
401 2880 2.106332 CGGCATACGGGACAGACC 59.894 66.667 0.00 0.00 39.42 3.85
402 2881 2.423898 CGGCATACGGGACAGACCT 61.424 63.158 0.00 0.00 39.42 3.85
408 2887 4.680237 CGGGACAGACCTGCGCAA 62.680 66.667 13.05 0.00 38.29 4.85
409 2888 2.743928 GGGACAGACCTGCGCAAG 60.744 66.667 13.05 8.37 38.98 4.01
496 2975 2.032860 GCGAGGAGGATGCTAGGCAA 62.033 60.000 0.00 0.00 43.62 4.52
560 3041 6.862090 CCAGCATCCTTTATACGAGTAACTAC 59.138 42.308 0.00 0.00 0.00 2.73
562 3043 8.082852 CAGCATCCTTTATACGAGTAACTACAT 58.917 37.037 0.00 0.00 0.00 2.29
564 3045 9.903682 GCATCCTTTATACGAGTAACTACATAA 57.096 33.333 0.00 0.00 0.00 1.90
574 3055 6.854892 ACGAGTAACTACATAATCATGCGTAC 59.145 38.462 0.00 0.00 35.39 3.67
622 3103 5.105756 GGTGATTACCAGCCCATATTAATGC 60.106 44.000 0.88 0.00 46.71 3.56
724 3209 5.582950 AATACTAATAGGCAGGGCAATGA 57.417 39.130 0.00 0.00 0.00 2.57
734 3219 0.188342 AGGGCAATGAGGTGGTTGTT 59.812 50.000 0.00 0.00 0.00 2.83
735 3220 1.427368 AGGGCAATGAGGTGGTTGTTA 59.573 47.619 0.00 0.00 0.00 2.41
756 3241 3.951663 AGGGTAAACCGATGGAGAAAAG 58.048 45.455 0.00 0.00 46.96 2.27
762 3247 6.091849 GGTAAACCGATGGAGAAAAGTAGAAC 59.908 42.308 0.00 0.00 0.00 3.01
784 3269 9.764363 AGAACTGGGAGAAAATAAAATCAAAAC 57.236 29.630 0.00 0.00 0.00 2.43
808 3293 9.927668 AACAGATAAAACAAAATGTAGGGAATG 57.072 29.630 0.00 0.00 0.00 2.67
832 3317 4.464008 AGGTAAGGTTGGACGATATACGA 58.536 43.478 0.00 0.00 45.77 3.43
835 3320 3.984508 AGGTTGGACGATATACGAGTG 57.015 47.619 0.00 0.00 45.77 3.51
836 3321 3.548770 AGGTTGGACGATATACGAGTGA 58.451 45.455 0.00 0.00 45.77 3.41
837 3322 3.564644 AGGTTGGACGATATACGAGTGAG 59.435 47.826 0.00 0.00 45.77 3.51
838 3323 3.562973 GGTTGGACGATATACGAGTGAGA 59.437 47.826 0.00 0.00 45.77 3.27
840 3325 5.206299 GTTGGACGATATACGAGTGAGAAG 58.794 45.833 0.00 0.00 45.77 2.85
841 3326 4.449131 TGGACGATATACGAGTGAGAAGT 58.551 43.478 0.00 0.00 45.77 3.01
896 3544 2.731217 GGACATGTGTGAAACTTGTGC 58.269 47.619 1.15 0.00 44.73 4.57
944 3592 0.669077 CACTAGACGAATCGGGAGGG 59.331 60.000 7.80 0.00 0.00 4.30
945 3593 0.467659 ACTAGACGAATCGGGAGGGG 60.468 60.000 7.80 0.00 0.00 4.79
946 3594 1.152610 TAGACGAATCGGGAGGGGG 60.153 63.158 7.80 0.00 0.00 5.40
1124 4123 0.674895 CCACCCGCTTTTCTCTCCAG 60.675 60.000 0.00 0.00 0.00 3.86
1125 4124 1.003233 ACCCGCTTTTCTCTCCAGC 60.003 57.895 0.00 0.00 0.00 4.85
1167 4166 1.408969 AACAAACAATCGGCAGGGTT 58.591 45.000 0.00 0.00 0.00 4.11
1202 4209 3.036959 TCCTCCCTCCCTCCTCCC 61.037 72.222 0.00 0.00 0.00 4.30
1346 4362 1.159664 AGGAGACAGGTCAGCCCTT 59.840 57.895 1.84 0.00 42.73 3.95
1418 4450 2.124860 TCGCGAGAGATGGACGGA 60.125 61.111 3.71 0.00 34.84 4.69
1419 4451 2.024871 CGCGAGAGATGGACGGAC 59.975 66.667 0.00 0.00 0.00 4.79
1421 4453 2.716244 CGAGAGATGGACGGACGG 59.284 66.667 0.00 0.00 0.00 4.79
1422 4454 1.818363 CGAGAGATGGACGGACGGA 60.818 63.158 0.00 0.00 0.00 4.69
1447 4479 4.576843 CGCATGACGCTAATGTGC 57.423 55.556 0.00 0.00 39.08 4.57
1525 4557 2.038837 CCCGGGTCGCTTCCTTTTC 61.039 63.158 14.18 0.00 0.00 2.29
1697 4729 2.561037 CCGTCTTGTTTGGGGGTGC 61.561 63.158 0.00 0.00 0.00 5.01
1699 4731 2.909965 TCTTGTTTGGGGGTGCGC 60.910 61.111 0.00 0.00 0.00 6.09
1749 4781 0.771756 CTTCGTTGTTGCGCACATTG 59.228 50.000 11.12 7.52 34.43 2.82
1762 4794 0.099968 CACATTGCTCGGGAATGCTG 59.900 55.000 14.75 10.13 34.67 4.41
1789 4821 0.941542 CGGTTGCGGTTCTTCTTTGA 59.058 50.000 0.00 0.00 0.00 2.69
1795 4827 1.535896 GCGGTTCTTCTTTGACCCTTC 59.464 52.381 0.00 0.00 0.00 3.46
1846 4878 5.392487 GCTTCCTTGCTCCAGATTTTAGTTC 60.392 44.000 0.00 0.00 0.00 3.01
1855 4887 7.334421 TGCTCCAGATTTTAGTTCATCTTGTAC 59.666 37.037 0.00 0.00 0.00 2.90
1856 4888 7.201652 GCTCCAGATTTTAGTTCATCTTGTACC 60.202 40.741 0.00 0.00 0.00 3.34
1884 4916 0.481567 AGCAAGATGATGGATGGGGG 59.518 55.000 0.00 0.00 0.00 5.40
1931 4964 0.807667 CCGGACATTTCTCTGGAGCG 60.808 60.000 0.00 0.00 38.86 5.03
1963 4996 4.220602 GCATTTCCCAGTATTGTCCTTTGT 59.779 41.667 0.00 0.00 0.00 2.83
1974 5007 2.986050 TGTCCTTTGTCCTTAGAGGGT 58.014 47.619 0.00 0.00 35.59 4.34
1998 5031 0.097150 GATCGGCAGTTTTCTTCGCC 59.903 55.000 0.00 0.00 41.30 5.54
2030 5063 8.601476 GGTCCAGATTTTAGTTTATCTTGTACG 58.399 37.037 0.00 0.00 0.00 3.67
2051 5084 3.480470 GGTACCAAGATGATGGATGTGG 58.520 50.000 7.15 0.00 43.54 4.17
2102 5137 3.254657 TCTTCCGGGCAGTTGTTATTTTG 59.745 43.478 0.00 0.00 0.00 2.44
2103 5138 1.889829 TCCGGGCAGTTGTTATTTTGG 59.110 47.619 0.00 0.00 0.00 3.28
2104 5139 1.616374 CCGGGCAGTTGTTATTTTGGT 59.384 47.619 0.00 0.00 0.00 3.67
2105 5140 2.352323 CCGGGCAGTTGTTATTTTGGTC 60.352 50.000 0.00 0.00 0.00 4.02
2106 5141 2.556622 CGGGCAGTTGTTATTTTGGTCT 59.443 45.455 0.00 0.00 0.00 3.85
2107 5142 3.611530 CGGGCAGTTGTTATTTTGGTCTG 60.612 47.826 0.00 0.00 0.00 3.51
2108 5143 3.320826 GGGCAGTTGTTATTTTGGTCTGT 59.679 43.478 0.00 0.00 0.00 3.41
2109 5144 4.298332 GGCAGTTGTTATTTTGGTCTGTG 58.702 43.478 0.00 0.00 0.00 3.66
2110 5145 4.037446 GGCAGTTGTTATTTTGGTCTGTGA 59.963 41.667 0.00 0.00 0.00 3.58
2116 5151 7.936847 AGTTGTTATTTTGGTCTGTGATGACTA 59.063 33.333 0.00 0.00 37.16 2.59
2171 5206 0.827507 GGCAACCCAAGCAGAGGAAA 60.828 55.000 0.00 0.00 0.00 3.13
2222 5257 0.188587 TGCGGGAGATCAGGAGGTAT 59.811 55.000 0.00 0.00 0.00 2.73
2311 5346 4.284746 TCATATCCTCTCGCTCTCTCTACA 59.715 45.833 0.00 0.00 0.00 2.74
2321 5356 3.112580 GCTCTCTCTACAAACGATCTGC 58.887 50.000 0.00 0.00 0.00 4.26
2327 5362 2.068519 CTACAAACGATCTGCAGTGCA 58.931 47.619 18.58 18.58 36.92 4.57
2343 5379 4.635765 GCAGTGCAGAGTGTAATTGGAATA 59.364 41.667 11.09 0.00 0.00 1.75
2451 5487 2.417379 GCGATTCAAGAGGTCAGTGCTA 60.417 50.000 0.00 0.00 0.00 3.49
2516 5552 8.743085 AGTACTACAATGCAGATGAATTCAAT 57.257 30.769 13.09 1.14 0.00 2.57
2520 5556 8.790718 ACTACAATGCAGATGAATTCAATATCC 58.209 33.333 13.09 1.26 0.00 2.59
2546 5582 3.731431 ACCATGAACTGTGGGGTAGATA 58.269 45.455 0.00 0.00 41.14 1.98
2567 5603 8.484641 AGATACATGTATCGCCTTAATTCATG 57.515 34.615 30.76 0.00 44.93 3.07
2584 5620 2.751259 TCATGGTTTCTGAATGCTCTGC 59.249 45.455 0.00 0.00 0.00 4.26
2643 5679 4.039366 GGTATTGTTTTGGTGGCTGGTAAA 59.961 41.667 0.00 0.00 0.00 2.01
2673 5709 6.142817 ACTGAAATGTGATTACGAGCAAAAC 58.857 36.000 0.00 0.00 0.00 2.43
2680 5716 3.548668 TGATTACGAGCAAAACGGTATCG 59.451 43.478 0.00 0.00 43.02 2.92
2687 5723 2.347452 AGCAAAACGGTATCGATTGTCG 59.653 45.455 1.71 8.15 42.10 4.35
2697 5733 2.278026 TCGATTGTCGATCCTGTGTG 57.722 50.000 0.00 0.00 44.82 3.82
2701 5737 3.186409 CGATTGTCGATCCTGTGTGTTTT 59.814 43.478 0.00 0.00 43.74 2.43
2730 5774 4.279169 ACATCTGGTTGTTTGGTCAAGATG 59.721 41.667 7.93 7.93 35.54 2.90
2732 5776 3.631686 TCTGGTTGTTTGGTCAAGATGTG 59.368 43.478 0.00 0.00 0.00 3.21
2733 5777 3.360867 TGGTTGTTTGGTCAAGATGTGT 58.639 40.909 0.00 0.00 0.00 3.72
2734 5778 3.766591 TGGTTGTTTGGTCAAGATGTGTT 59.233 39.130 0.00 0.00 0.00 3.32
2735 5779 4.221703 TGGTTGTTTGGTCAAGATGTGTTT 59.778 37.500 0.00 0.00 0.00 2.83
2736 5780 4.566360 GGTTGTTTGGTCAAGATGTGTTTG 59.434 41.667 0.00 0.00 0.00 2.93
2737 5781 5.167845 GTTGTTTGGTCAAGATGTGTTTGT 58.832 37.500 0.00 0.00 0.00 2.83
2738 5782 4.742417 TGTTTGGTCAAGATGTGTTTGTG 58.258 39.130 0.00 0.00 0.00 3.33
2739 5783 3.435105 TTGGTCAAGATGTGTTTGTGC 57.565 42.857 0.00 0.00 0.00 4.57
2740 5784 2.373224 TGGTCAAGATGTGTTTGTGCA 58.627 42.857 0.00 0.00 0.00 4.57
2741 5785 2.098934 TGGTCAAGATGTGTTTGTGCAC 59.901 45.455 10.75 10.75 39.65 4.57
2791 5844 6.710744 ACACTCAAAACTGACTATTGGTTAGG 59.289 38.462 0.00 0.00 36.07 2.69
2846 5899 3.090037 GAGAGGTGAGCAAGTGGTAGTA 58.910 50.000 0.00 0.00 0.00 1.82
2914 5976 4.593956 TGCATGTTATGGTTATGTGTCCA 58.406 39.130 0.00 0.00 38.14 4.02
3035 6130 5.581605 AGTGTTGTTTGCACAATAGACTTG 58.418 37.500 0.00 0.00 44.85 3.16
3130 6225 4.074970 AGTGTGGCCTAAGAAATGAGTTG 58.925 43.478 3.32 0.00 0.00 3.16
3131 6226 3.821033 GTGTGGCCTAAGAAATGAGTTGT 59.179 43.478 3.32 0.00 0.00 3.32
3132 6227 5.001232 GTGTGGCCTAAGAAATGAGTTGTA 58.999 41.667 3.32 0.00 0.00 2.41
3133 6228 5.001232 TGTGGCCTAAGAAATGAGTTGTAC 58.999 41.667 3.32 0.00 0.00 2.90
3134 6229 5.221843 TGTGGCCTAAGAAATGAGTTGTACT 60.222 40.000 3.32 0.00 0.00 2.73
3302 6397 8.279103 CAGTAAGTTCTCACTGAATGAAAACTC 58.721 37.037 0.00 0.00 46.02 3.01
3322 6417 9.489084 AAAACTCCCTTTCTTTTACAATATTGC 57.511 29.630 15.48 0.00 0.00 3.56
3489 6584 1.751924 AGCTCCTCGTATCTGTTGTCC 59.248 52.381 0.00 0.00 0.00 4.02
3502 6597 4.443621 TCTGTTGTCCACGAACAAACATA 58.556 39.130 0.00 0.00 40.62 2.29
3563 6658 8.558700 CAAACAGTATATGTGCACTGCATATTA 58.441 33.333 19.41 8.09 44.89 0.98
3571 6666 9.895138 ATATGTGCACTGCATATTAGATATCAA 57.105 29.630 19.41 0.00 40.60 2.57
3572 6667 8.625786 ATGTGCACTGCATATTAGATATCAAA 57.374 30.769 19.41 0.00 41.91 2.69
3573 6668 7.864686 TGTGCACTGCATATTAGATATCAAAC 58.135 34.615 19.41 0.00 41.91 2.93
3574 6669 7.041167 TGTGCACTGCATATTAGATATCAAACC 60.041 37.037 19.41 0.00 41.91 3.27
3575 6670 7.173907 GTGCACTGCATATTAGATATCAAACCT 59.826 37.037 10.32 0.00 41.91 3.50
3576 6671 7.173735 TGCACTGCATATTAGATATCAAACCTG 59.826 37.037 5.32 0.00 31.71 4.00
3577 6672 7.361542 GCACTGCATATTAGATATCAAACCTGG 60.362 40.741 5.32 0.00 0.00 4.45
3578 6673 7.663081 CACTGCATATTAGATATCAAACCTGGT 59.337 37.037 5.32 0.00 0.00 4.00
3579 6674 8.220559 ACTGCATATTAGATATCAAACCTGGTT 58.779 33.333 6.18 6.18 0.00 3.67
3580 6675 9.725019 CTGCATATTAGATATCAAACCTGGTTA 57.275 33.333 13.37 0.00 0.00 2.85
3581 6676 9.502091 TGCATATTAGATATCAAACCTGGTTAC 57.498 33.333 13.37 1.27 0.00 2.50
3582 6677 9.726438 GCATATTAGATATCAAACCTGGTTACT 57.274 33.333 13.37 8.17 0.00 2.24
3588 6683 8.701908 AGATATCAAACCTGGTTACTATACGA 57.298 34.615 13.37 1.99 0.00 3.43
3589 6684 8.574737 AGATATCAAACCTGGTTACTATACGAC 58.425 37.037 13.37 6.82 0.00 4.34
3590 6685 6.786967 ATCAAACCTGGTTACTATACGACT 57.213 37.500 13.37 0.00 0.00 4.18
3591 6686 5.957798 TCAAACCTGGTTACTATACGACTG 58.042 41.667 13.37 3.44 0.00 3.51
3592 6687 5.711506 TCAAACCTGGTTACTATACGACTGA 59.288 40.000 13.37 5.87 0.00 3.41
3593 6688 6.379133 TCAAACCTGGTTACTATACGACTGAT 59.621 38.462 13.37 0.00 0.00 2.90
3764 6865 2.804167 CATCTCTCTGCGAGGCGT 59.196 61.111 5.87 0.00 40.30 5.68
3779 6880 4.498520 CGTGAGGGCGCATCTCGT 62.499 66.667 21.05 2.73 41.07 4.18
4145 7718 2.964978 GCAAGGCGCAACAGGAAT 59.035 55.556 10.83 0.00 41.79 3.01
4189 7762 1.596477 GGTGGATCAGATCTGCGGC 60.596 63.158 18.36 9.03 0.00 6.53
4877 8458 0.615331 AATCACTGTGGCGTCCAGAT 59.385 50.000 8.11 3.33 32.34 2.90
5051 8632 0.108019 GGTTCCAGGTGTCCTTTCGT 59.892 55.000 0.00 0.00 0.00 3.85
5092 8673 0.591659 GTGCCTGGTTTCGTTCTTCC 59.408 55.000 0.00 0.00 0.00 3.46
5186 8767 2.744202 CCCTGTGTGTTTCAGTCTATGC 59.256 50.000 0.00 0.00 0.00 3.14
5440 9047 6.190954 ACTTGGAAACTGTTTTACTGTGAC 57.809 37.500 7.28 0.00 30.49 3.67
5472 9081 4.388165 GCCACTAGAATCATGATCACATCG 59.612 45.833 9.06 0.00 34.15 3.84
5516 9130 3.967332 AAATGCTCCTGAACAAATGGG 57.033 42.857 0.00 0.00 0.00 4.00
5564 9178 2.488153 GCATGTTCCTGTTAACCTGACC 59.512 50.000 2.48 0.00 29.49 4.02
5565 9179 3.810743 GCATGTTCCTGTTAACCTGACCT 60.811 47.826 2.48 0.00 29.49 3.85
5566 9180 4.398319 CATGTTCCTGTTAACCTGACCTT 58.602 43.478 2.48 0.00 29.49 3.50
5567 9181 4.513406 TGTTCCTGTTAACCTGACCTTT 57.487 40.909 2.48 0.00 0.00 3.11
5568 9182 4.862371 TGTTCCTGTTAACCTGACCTTTT 58.138 39.130 2.48 0.00 0.00 2.27
5569 9183 5.265989 TGTTCCTGTTAACCTGACCTTTTT 58.734 37.500 2.48 0.00 0.00 1.94
5570 9184 5.358725 TGTTCCTGTTAACCTGACCTTTTTC 59.641 40.000 2.48 0.00 0.00 2.29
5571 9185 4.466827 TCCTGTTAACCTGACCTTTTTCC 58.533 43.478 2.48 0.00 0.00 3.13
5608 9222 3.254166 CAGTGCAAAAGGACATACAGCTT 59.746 43.478 0.00 0.00 0.00 3.74
5763 9377 6.121776 AGTGGTCCAATATGTTTGACTGTA 57.878 37.500 6.41 0.00 32.24 2.74
5837 9452 6.035005 CGAAGTTGATCTGATTCGTTACATGT 59.965 38.462 2.69 2.69 39.62 3.21
5934 9549 2.823154 GGAATCGGTTGTGGATTTTCCA 59.177 45.455 0.00 0.00 45.98 3.53
5950 9565 4.963276 TTTCCACATTATTGAAGGAGCG 57.037 40.909 0.00 0.00 34.03 5.03
5965 9580 2.574212 GCGAACCAGAATTGCGCG 60.574 61.111 0.00 0.00 38.24 6.86
5993 9642 5.558307 CGTTTTCATGCATGTTTTGTTTGT 58.442 33.333 25.43 0.00 0.00 2.83
5994 9643 5.448479 CGTTTTCATGCATGTTTTGTTTGTG 59.552 36.000 25.43 0.00 0.00 3.33
5995 9644 6.541086 GTTTTCATGCATGTTTTGTTTGTGA 58.459 32.000 25.43 0.00 0.00 3.58
5997 9646 6.528014 TTCATGCATGTTTTGTTTGTGATC 57.472 33.333 25.43 0.00 0.00 2.92
5999 9648 5.692654 TCATGCATGTTTTGTTTGTGATCAG 59.307 36.000 25.43 0.00 0.00 2.90
6000 9649 3.803231 TGCATGTTTTGTTTGTGATCAGC 59.197 39.130 0.00 0.00 0.00 4.26
6012 9661 3.407046 GATCAGCCAGCGCCTTTGC 62.407 63.158 2.29 1.09 34.57 3.68
6071 9762 0.951558 ACACACCGCACCATTTCTTC 59.048 50.000 0.00 0.00 0.00 2.87
6079 9783 3.559655 CCGCACCATTTCTTCGATAATGA 59.440 43.478 13.77 0.00 34.44 2.57
6107 9811 1.509644 AACTGCCATCACACACTGCG 61.510 55.000 0.00 0.00 0.00 5.18
6142 9851 5.747565 TCAACAATGACGATCAAACTTCAC 58.252 37.500 0.00 0.00 0.00 3.18
6271 10022 7.150783 TGACCAATATGATGAGATAGAGACG 57.849 40.000 0.00 0.00 0.00 4.18
6391 13790 2.203209 GGGACATGCTAAGGGCCG 60.203 66.667 0.00 0.00 40.92 6.13
6392 13791 2.902343 GGACATGCTAAGGGCCGC 60.902 66.667 0.00 0.00 40.92 6.53
6393 13792 2.902343 GACATGCTAAGGGCCGCC 60.902 66.667 0.00 0.00 40.92 6.13
6408 13807 2.731374 GCCTAGGGCTGCTACTCG 59.269 66.667 11.72 0.00 46.69 4.18
6484 13883 2.093341 ACTGTTTCTACCACAACCACGT 60.093 45.455 0.00 0.00 0.00 4.49
6485 13884 2.940410 CTGTTTCTACCACAACCACGTT 59.060 45.455 0.00 0.00 0.00 3.99
6488 13887 4.332268 TGTTTCTACCACAACCACGTTAAC 59.668 41.667 0.00 0.00 0.00 2.01
6505 13904 4.748102 CGTTAACCATATGAGCGGTGTAAT 59.252 41.667 3.65 0.00 35.08 1.89
6677 14076 6.959639 AACATAATATGAAATGGAAGGCGT 57.040 33.333 7.33 0.00 0.00 5.68
6678 14077 6.560253 ACATAATATGAAATGGAAGGCGTC 57.440 37.500 7.33 0.00 0.00 5.19
6679 14078 6.061441 ACATAATATGAAATGGAAGGCGTCA 58.939 36.000 7.33 0.00 0.00 4.35
6680 14079 6.205464 ACATAATATGAAATGGAAGGCGTCAG 59.795 38.462 7.33 0.00 0.00 3.51
6681 14080 2.787473 ATGAAATGGAAGGCGTCAGA 57.213 45.000 2.23 0.00 0.00 3.27
6682 14081 2.559698 TGAAATGGAAGGCGTCAGAA 57.440 45.000 2.23 0.00 0.00 3.02
6683 14082 2.857483 TGAAATGGAAGGCGTCAGAAA 58.143 42.857 2.23 0.00 0.00 2.52
6684 14083 3.420893 TGAAATGGAAGGCGTCAGAAAT 58.579 40.909 2.23 0.00 0.00 2.17
6685 14084 3.191162 TGAAATGGAAGGCGTCAGAAATG 59.809 43.478 2.23 0.00 0.00 2.32
6686 14085 2.787473 ATGGAAGGCGTCAGAAATGA 57.213 45.000 2.23 0.00 0.00 2.57
6687 14086 1.808411 TGGAAGGCGTCAGAAATGAC 58.192 50.000 2.23 0.00 35.59 3.06
6688 14087 1.071542 TGGAAGGCGTCAGAAATGACA 59.928 47.619 8.91 0.00 38.65 3.58
6689 14088 2.290260 TGGAAGGCGTCAGAAATGACAT 60.290 45.455 8.91 0.00 38.65 3.06
6690 14089 2.352960 GGAAGGCGTCAGAAATGACATC 59.647 50.000 8.91 0.65 38.65 3.06
6691 14090 2.768253 AGGCGTCAGAAATGACATCA 57.232 45.000 8.91 0.00 38.65 3.07
6692 14091 3.057969 AGGCGTCAGAAATGACATCAA 57.942 42.857 8.91 0.00 38.65 2.57
6693 14092 3.614092 AGGCGTCAGAAATGACATCAAT 58.386 40.909 8.91 0.00 38.65 2.57
6694 14093 4.769688 AGGCGTCAGAAATGACATCAATA 58.230 39.130 8.91 0.00 38.65 1.90
6695 14094 5.371526 AGGCGTCAGAAATGACATCAATAT 58.628 37.500 8.91 0.00 38.65 1.28
6696 14095 6.524734 AGGCGTCAGAAATGACATCAATATA 58.475 36.000 8.91 0.00 38.65 0.86
6697 14096 6.992123 AGGCGTCAGAAATGACATCAATATAA 59.008 34.615 8.91 0.00 38.65 0.98
6698 14097 7.041780 AGGCGTCAGAAATGACATCAATATAAC 60.042 37.037 8.91 0.00 38.65 1.89
6699 14098 7.254761 GGCGTCAGAAATGACATCAATATAACA 60.255 37.037 8.91 0.00 38.65 2.41
6700 14099 8.285394 GCGTCAGAAATGACATCAATATAACAT 58.715 33.333 8.91 0.00 38.65 2.71
6721 14120 8.567285 AACATAATATAAGCTACTTGGCATCC 57.433 34.615 0.00 0.00 34.17 3.51
6722 14121 7.689299 ACATAATATAAGCTACTTGGCATCCA 58.311 34.615 0.00 0.00 34.17 3.41
6723 14122 8.163408 ACATAATATAAGCTACTTGGCATCCAA 58.837 33.333 0.00 0.00 41.69 3.53
6724 14123 9.013229 CATAATATAAGCTACTTGGCATCCAAA 57.987 33.333 0.00 0.00 43.44 3.28
6725 14124 7.896383 AATATAAGCTACTTGGCATCCAAAA 57.104 32.000 0.00 0.00 43.44 2.44
6726 14125 5.841957 ATAAGCTACTTGGCATCCAAAAG 57.158 39.130 0.00 2.34 43.44 2.27
6727 14126 3.439857 AGCTACTTGGCATCCAAAAGA 57.560 42.857 10.20 0.00 43.44 2.52
6728 14127 3.766545 AGCTACTTGGCATCCAAAAGAA 58.233 40.909 10.20 0.00 43.44 2.52
6729 14128 3.760684 AGCTACTTGGCATCCAAAAGAAG 59.239 43.478 10.20 0.00 43.44 2.85
6730 14129 3.507622 GCTACTTGGCATCCAAAAGAAGT 59.492 43.478 10.20 0.00 43.44 3.01
6731 14130 4.616835 GCTACTTGGCATCCAAAAGAAGTG 60.617 45.833 10.20 0.00 43.44 3.16
6732 14131 3.299503 ACTTGGCATCCAAAAGAAGTGT 58.700 40.909 0.00 0.00 43.44 3.55
6733 14132 3.068590 ACTTGGCATCCAAAAGAAGTGTG 59.931 43.478 0.00 0.00 43.44 3.82
6734 14133 1.962807 TGGCATCCAAAAGAAGTGTGG 59.037 47.619 0.00 0.00 0.00 4.17
6735 14134 1.273327 GGCATCCAAAAGAAGTGTGGG 59.727 52.381 0.00 0.00 32.95 4.61
6736 14135 1.273327 GCATCCAAAAGAAGTGTGGGG 59.727 52.381 0.00 0.00 32.95 4.96
6737 14136 2.875296 CATCCAAAAGAAGTGTGGGGA 58.125 47.619 0.00 0.00 32.95 4.81
6738 14137 3.434309 CATCCAAAAGAAGTGTGGGGAT 58.566 45.455 0.00 0.00 34.13 3.85
6739 14138 4.599041 CATCCAAAAGAAGTGTGGGGATA 58.401 43.478 0.00 0.00 32.66 2.59
6740 14139 4.946160 TCCAAAAGAAGTGTGGGGATAT 57.054 40.909 0.00 0.00 32.95 1.63
6741 14140 5.269554 TCCAAAAGAAGTGTGGGGATATT 57.730 39.130 0.00 0.00 32.95 1.28
6742 14141 5.016173 TCCAAAAGAAGTGTGGGGATATTG 58.984 41.667 0.00 0.00 32.95 1.90
6743 14142 4.772100 CCAAAAGAAGTGTGGGGATATTGT 59.228 41.667 0.00 0.00 0.00 2.71
6744 14143 5.245977 CCAAAAGAAGTGTGGGGATATTGTT 59.754 40.000 0.00 0.00 0.00 2.83
6745 14144 6.239572 CCAAAAGAAGTGTGGGGATATTGTTT 60.240 38.462 0.00 0.00 0.00 2.83
6746 14145 7.039363 CCAAAAGAAGTGTGGGGATATTGTTTA 60.039 37.037 0.00 0.00 0.00 2.01
6747 14146 7.703058 AAAGAAGTGTGGGGATATTGTTTAG 57.297 36.000 0.00 0.00 0.00 1.85
6748 14147 6.636454 AGAAGTGTGGGGATATTGTTTAGA 57.364 37.500 0.00 0.00 0.00 2.10
6749 14148 6.653989 AGAAGTGTGGGGATATTGTTTAGAG 58.346 40.000 0.00 0.00 0.00 2.43
6750 14149 6.443849 AGAAGTGTGGGGATATTGTTTAGAGA 59.556 38.462 0.00 0.00 0.00 3.10
6751 14150 6.240549 AGTGTGGGGATATTGTTTAGAGAG 57.759 41.667 0.00 0.00 0.00 3.20
6752 14151 5.131142 AGTGTGGGGATATTGTTTAGAGAGG 59.869 44.000 0.00 0.00 0.00 3.69
6753 14152 4.412199 TGTGGGGATATTGTTTAGAGAGGG 59.588 45.833 0.00 0.00 0.00 4.30
6754 14153 4.658901 GTGGGGATATTGTTTAGAGAGGGA 59.341 45.833 0.00 0.00 0.00 4.20
6755 14154 4.907875 TGGGGATATTGTTTAGAGAGGGAG 59.092 45.833 0.00 0.00 0.00 4.30
6756 14155 4.908481 GGGGATATTGTTTAGAGAGGGAGT 59.092 45.833 0.00 0.00 0.00 3.85
6757 14156 5.221742 GGGGATATTGTTTAGAGAGGGAGTG 60.222 48.000 0.00 0.00 0.00 3.51
6871 14274 7.120579 AGCGACAAAGTAATGACCAATGAAATA 59.879 33.333 0.00 0.00 0.00 1.40
6873 14276 9.787532 CGACAAAGTAATGACCAATGAAATATT 57.212 29.630 0.00 0.00 0.00 1.28
6875 14278 9.369904 ACAAAGTAATGACCAATGAAATATTGC 57.630 29.630 0.00 0.00 0.00 3.56
6879 14282 9.851686 AGTAATGACCAATGAAATATTGCTAGA 57.148 29.630 0.00 0.00 0.00 2.43
6885 14288 9.565213 GACCAATGAAATATTGCTAGATATTGC 57.435 33.333 0.00 0.00 33.61 3.56
6886 14289 9.305555 ACCAATGAAATATTGCTAGATATTGCT 57.694 29.630 0.00 0.00 33.61 3.91
6906 14309 5.192176 TGCTAGATATGATTGTGTTTGGCA 58.808 37.500 0.00 0.00 0.00 4.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.936919 AGTCAACCATTGAGTCAGCA 57.063 45.000 0.00 0.00 39.00 4.41
13 14 3.307975 CCATGGAGAGTCAACCATTGAGT 60.308 47.826 5.56 0.00 43.30 3.41
14 15 3.276857 CCATGGAGAGTCAACCATTGAG 58.723 50.000 5.56 8.05 43.30 3.02
16 17 3.077484 ACCATGGAGAGTCAACCATTG 57.923 47.619 21.47 15.14 43.30 2.82
17 18 3.074390 TCAACCATGGAGAGTCAACCATT 59.926 43.478 21.47 0.00 43.30 3.16
18 19 2.644299 TCAACCATGGAGAGTCAACCAT 59.356 45.455 21.47 13.71 46.22 3.55
20 21 2.427506 GTCAACCATGGAGAGTCAACC 58.572 52.381 21.47 0.00 0.00 3.77
21 22 2.224523 TGGTCAACCATGGAGAGTCAAC 60.225 50.000 21.47 6.21 42.01 3.18
22 23 2.038952 CTGGTCAACCATGGAGAGTCAA 59.961 50.000 21.47 0.00 46.46 3.18
24 25 1.677217 GCTGGTCAACCATGGAGAGTC 60.677 57.143 21.47 11.11 46.46 3.36
26 27 0.393537 GGCTGGTCAACCATGGAGAG 60.394 60.000 21.47 7.65 46.46 3.20
27 28 1.133181 TGGCTGGTCAACCATGGAGA 61.133 55.000 21.47 13.24 46.46 3.71
28 29 0.251297 TTGGCTGGTCAACCATGGAG 60.251 55.000 21.47 10.83 46.46 3.86
29 30 0.539438 GTTGGCTGGTCAACCATGGA 60.539 55.000 21.47 0.00 46.46 3.41
30 31 0.540365 AGTTGGCTGGTCAACCATGG 60.540 55.000 11.19 11.19 46.46 3.66
32 33 3.040965 CAGTTGGCTGGTCAACCAT 57.959 52.632 13.46 0.00 46.46 3.55
64 65 1.222115 AAGAAAGGTCGCTGACACGC 61.222 55.000 10.14 0.00 33.68 5.34
65 66 1.217882 AAAGAAAGGTCGCTGACACG 58.782 50.000 10.14 0.00 33.68 4.49
66 67 3.692791 AAAAAGAAAGGTCGCTGACAC 57.307 42.857 10.14 1.63 33.68 3.67
105 106 8.363390 ACCCGGACGGTTAAAAATTAAATAAAA 58.637 29.630 0.73 0.00 45.36 1.52
107 108 7.459795 ACCCGGACGGTTAAAAATTAAATAA 57.540 32.000 0.73 0.00 45.36 1.40
109 110 5.981088 ACCCGGACGGTTAAAAATTAAAT 57.019 34.783 0.73 0.00 45.36 1.40
122 123 2.266689 CCCAGTTAACCCGGACGG 59.733 66.667 0.73 3.25 37.81 4.79
123 124 2.435410 GCCCAGTTAACCCGGACG 60.435 66.667 0.73 0.00 0.00 4.79
124 125 1.376812 CTGCCCAGTTAACCCGGAC 60.377 63.158 0.73 2.62 0.00 4.79
125 126 3.074281 CTGCCCAGTTAACCCGGA 58.926 61.111 0.73 0.00 0.00 5.14
126 127 2.750237 GCTGCCCAGTTAACCCGG 60.750 66.667 0.88 3.25 0.00 5.73
128 129 2.750237 CCGCTGCCCAGTTAACCC 60.750 66.667 0.88 0.00 0.00 4.11
130 131 3.440415 GCCCGCTGCCCAGTTAAC 61.440 66.667 0.00 0.00 0.00 2.01
144 145 3.134127 GACGCTGACAATGGGCCC 61.134 66.667 17.59 17.59 0.00 5.80
145 146 2.359850 TGACGCTGACAATGGGCC 60.360 61.111 0.00 0.00 0.00 5.80
146 147 2.690778 GGTGACGCTGACAATGGGC 61.691 63.158 0.00 0.00 0.00 5.36
147 148 3.578456 GGTGACGCTGACAATGGG 58.422 61.111 0.00 0.00 0.00 4.00
167 168 3.277514 TACCCTTCCACCCCCTCCC 62.278 68.421 0.00 0.00 0.00 4.30
168 169 1.693103 CTACCCTTCCACCCCCTCC 60.693 68.421 0.00 0.00 0.00 4.30
169 170 0.549413 AACTACCCTTCCACCCCCTC 60.549 60.000 0.00 0.00 0.00 4.30
170 171 0.801574 TAACTACCCTTCCACCCCCT 59.198 55.000 0.00 0.00 0.00 4.79
171 172 1.773052 GATAACTACCCTTCCACCCCC 59.227 57.143 0.00 0.00 0.00 5.40
172 173 2.484602 TGATAACTACCCTTCCACCCC 58.515 52.381 0.00 0.00 0.00 4.95
173 174 3.680754 CGTTGATAACTACCCTTCCACCC 60.681 52.174 0.00 0.00 0.00 4.61
174 175 3.528532 CGTTGATAACTACCCTTCCACC 58.471 50.000 0.00 0.00 0.00 4.61
175 176 2.934553 GCGTTGATAACTACCCTTCCAC 59.065 50.000 0.00 0.00 0.00 4.02
176 177 2.093341 GGCGTTGATAACTACCCTTCCA 60.093 50.000 0.00 0.00 0.00 3.53
177 178 2.093341 TGGCGTTGATAACTACCCTTCC 60.093 50.000 0.00 0.00 0.00 3.46
178 179 3.255969 TGGCGTTGATAACTACCCTTC 57.744 47.619 0.00 0.00 0.00 3.46
180 181 3.926058 AATGGCGTTGATAACTACCCT 57.074 42.857 0.00 0.00 0.00 4.34
182 183 4.727235 GCTAATGGCGTTGATAACTACC 57.273 45.455 1.27 0.00 0.00 3.18
198 199 2.069273 GCATCGTCATTAGCCGCTAAT 58.931 47.619 18.22 18.22 37.16 1.73
199 200 1.497991 GCATCGTCATTAGCCGCTAA 58.502 50.000 15.10 15.10 0.00 3.09
201 202 1.595382 GGCATCGTCATTAGCCGCT 60.595 57.895 0.00 0.00 37.41 5.52
205 206 2.677971 ACGTGGCATCGTCATTAGC 58.322 52.632 8.87 0.00 40.04 3.09
222 223 1.269166 ATTTCGACGATGACGCTGAC 58.731 50.000 0.00 0.00 43.96 3.51
224 225 3.303495 AGTTAATTTCGACGATGACGCTG 59.697 43.478 0.00 0.00 43.96 5.18
225 226 3.508762 AGTTAATTTCGACGATGACGCT 58.491 40.909 0.00 0.00 43.96 5.07
226 227 3.301643 GGAGTTAATTTCGACGATGACGC 60.302 47.826 0.00 0.00 43.96 5.19
227 228 3.855379 TGGAGTTAATTTCGACGATGACG 59.145 43.478 0.00 0.00 45.75 4.35
228 229 5.773239 TTGGAGTTAATTTCGACGATGAC 57.227 39.130 0.00 0.00 0.00 3.06
229 230 5.350365 CCTTTGGAGTTAATTTCGACGATGA 59.650 40.000 0.00 0.00 0.00 2.92
230 231 5.121768 ACCTTTGGAGTTAATTTCGACGATG 59.878 40.000 0.00 0.00 0.00 3.84
231 232 5.243207 ACCTTTGGAGTTAATTTCGACGAT 58.757 37.500 0.00 0.00 0.00 3.73
232 233 4.634199 ACCTTTGGAGTTAATTTCGACGA 58.366 39.130 0.00 0.00 0.00 4.20
233 234 5.163923 GGTACCTTTGGAGTTAATTTCGACG 60.164 44.000 4.06 0.00 0.00 5.12
234 235 5.163923 CGGTACCTTTGGAGTTAATTTCGAC 60.164 44.000 10.90 0.00 0.00 4.20
235 236 4.931002 CGGTACCTTTGGAGTTAATTTCGA 59.069 41.667 10.90 0.00 0.00 3.71
236 237 4.931002 TCGGTACCTTTGGAGTTAATTTCG 59.069 41.667 10.90 0.00 0.00 3.46
237 238 6.037940 GGATCGGTACCTTTGGAGTTAATTTC 59.962 42.308 10.90 0.00 0.00 2.17
238 239 5.884232 GGATCGGTACCTTTGGAGTTAATTT 59.116 40.000 10.90 0.00 0.00 1.82
239 240 5.434408 GGATCGGTACCTTTGGAGTTAATT 58.566 41.667 10.90 0.00 0.00 1.40
241 242 3.119029 CGGATCGGTACCTTTGGAGTTAA 60.119 47.826 10.90 0.00 0.00 2.01
242 243 2.428171 CGGATCGGTACCTTTGGAGTTA 59.572 50.000 10.90 0.00 0.00 2.24
243 244 1.206371 CGGATCGGTACCTTTGGAGTT 59.794 52.381 10.90 0.00 0.00 3.01
244 245 0.822164 CGGATCGGTACCTTTGGAGT 59.178 55.000 10.90 0.00 0.00 3.85
246 247 1.559368 TTCGGATCGGTACCTTTGGA 58.441 50.000 10.90 0.00 0.00 3.53
247 248 2.389962 TTTCGGATCGGTACCTTTGG 57.610 50.000 10.90 0.00 0.00 3.28
248 249 3.120095 GGTTTTTCGGATCGGTACCTTTG 60.120 47.826 10.90 0.00 0.00 2.77
249 250 3.076621 GGTTTTTCGGATCGGTACCTTT 58.923 45.455 10.90 0.00 0.00 3.11
250 251 2.038820 TGGTTTTTCGGATCGGTACCTT 59.961 45.455 10.90 0.00 0.00 3.50
251 252 1.624813 TGGTTTTTCGGATCGGTACCT 59.375 47.619 10.90 0.00 0.00 3.08
253 254 1.395954 GCTGGTTTTTCGGATCGGTAC 59.604 52.381 0.00 0.00 0.00 3.34
254 255 1.676615 GGCTGGTTTTTCGGATCGGTA 60.677 52.381 0.00 0.00 0.00 4.02
256 257 0.958382 TGGCTGGTTTTTCGGATCGG 60.958 55.000 0.00 0.00 0.00 4.18
257 258 0.447801 CTGGCTGGTTTTTCGGATCG 59.552 55.000 0.00 0.00 0.00 3.69
258 259 0.811281 CCTGGCTGGTTTTTCGGATC 59.189 55.000 1.62 0.00 0.00 3.36
259 260 2.961424 CCTGGCTGGTTTTTCGGAT 58.039 52.632 1.62 0.00 0.00 4.18
260 261 4.492604 CCTGGCTGGTTTTTCGGA 57.507 55.556 1.62 0.00 0.00 4.55
272 2751 2.039879 TCTTTCTTGGACCTTACCTGGC 59.960 50.000 0.00 0.00 0.00 4.85
275 2754 2.289506 GCGTCTTTCTTGGACCTTACCT 60.290 50.000 0.00 0.00 0.00 3.08
280 2759 0.600255 CGTGCGTCTTTCTTGGACCT 60.600 55.000 0.00 0.00 0.00 3.85
300 2779 4.942481 TGCGCGTGTCGAGTTGCT 62.942 61.111 8.43 0.00 41.67 3.91
318 2797 2.249309 CGTCTGCCAAGTTGTGCG 59.751 61.111 1.45 2.84 0.00 5.34
346 2825 1.596954 GCGTGTGTTGTTTCATTCGCT 60.597 47.619 0.00 0.00 38.29 4.93
358 2837 1.667830 CCCTCGTCATGCGTGTGTT 60.668 57.895 5.68 0.00 42.13 3.32
368 2847 2.741985 CGCATGTTGCCCTCGTCA 60.742 61.111 0.00 0.00 41.12 4.35
381 2860 2.108976 CTGTCCCGTATGCCGCAT 59.891 61.111 11.38 11.38 34.38 4.73
382 2861 3.071837 TCTGTCCCGTATGCCGCA 61.072 61.111 0.00 0.00 34.38 5.69
393 2872 3.426568 GCTTGCGCAGGTCTGTCC 61.427 66.667 21.36 0.00 35.78 4.02
397 2876 4.711949 CTGGGCTTGCGCAGGTCT 62.712 66.667 23.86 0.00 38.10 3.85
515 2994 2.539953 GGAGTAGTCATTCTCGCTCGTG 60.540 54.545 0.00 0.00 32.74 4.35
516 2995 1.671845 GGAGTAGTCATTCTCGCTCGT 59.328 52.381 0.00 0.00 32.74 4.18
525 3006 4.851639 AAAGGATGCTGGAGTAGTCATT 57.148 40.909 0.00 0.00 0.00 2.57
562 3043 9.719355 ACTGGAATATTTATGTACGCATGATTA 57.281 29.630 0.00 0.00 36.58 1.75
564 3045 9.371136 CTACTGGAATATTTATGTACGCATGAT 57.629 33.333 0.00 0.00 36.58 2.45
574 3055 9.950496 ACCTGCTAATCTACTGGAATATTTATG 57.050 33.333 0.00 0.00 0.00 1.90
585 3066 6.161855 TGGTAATCACCTGCTAATCTACTG 57.838 41.667 0.00 0.00 45.98 2.74
598 3079 5.105756 GCATTAATATGGGCTGGTAATCACC 60.106 44.000 0.00 0.00 37.51 4.02
714 3199 0.540365 ACAACCACCTCATTGCCCTG 60.540 55.000 0.00 0.00 0.00 4.45
724 3209 2.224597 CGGTTTACCCTAACAACCACCT 60.225 50.000 0.00 0.00 40.14 4.00
734 3219 4.533311 ACTTTTCTCCATCGGTTTACCCTA 59.467 41.667 0.00 0.00 0.00 3.53
735 3220 3.329814 ACTTTTCTCCATCGGTTTACCCT 59.670 43.478 0.00 0.00 0.00 4.34
762 3247 9.933723 ATCTGTTTTGATTTTATTTTCTCCCAG 57.066 29.630 0.00 0.00 0.00 4.45
779 3264 9.757227 TCCCTACATTTTGTTTTATCTGTTTTG 57.243 29.630 0.00 0.00 0.00 2.44
808 3293 5.470098 TCGTATATCGTCCAACCTTACCTAC 59.530 44.000 0.00 0.00 40.80 3.18
855 3340 8.996024 TGTCCAAAAGCTAATAAATAAAAGCC 57.004 30.769 0.00 0.00 35.54 4.35
860 3345 9.853555 CACACATGTCCAAAAGCTAATAAATAA 57.146 29.630 0.00 0.00 0.00 1.40
864 3349 7.517614 TTCACACATGTCCAAAAGCTAATAA 57.482 32.000 0.00 0.00 0.00 1.40
865 3350 7.230510 AGTTTCACACATGTCCAAAAGCTAATA 59.769 33.333 0.00 0.00 0.00 0.98
866 3351 6.040842 AGTTTCACACATGTCCAAAAGCTAAT 59.959 34.615 0.00 0.00 0.00 1.73
867 3352 5.359576 AGTTTCACACATGTCCAAAAGCTAA 59.640 36.000 0.00 0.00 0.00 3.09
868 3353 4.887071 AGTTTCACACATGTCCAAAAGCTA 59.113 37.500 0.00 0.00 0.00 3.32
869 3354 3.701040 AGTTTCACACATGTCCAAAAGCT 59.299 39.130 0.00 0.00 0.00 3.74
870 3355 4.045636 AGTTTCACACATGTCCAAAAGC 57.954 40.909 0.00 0.00 0.00 3.51
871 3356 5.289193 CACAAGTTTCACACATGTCCAAAAG 59.711 40.000 0.00 0.00 35.05 2.27
876 3517 2.543653 GGCACAAGTTTCACACATGTCC 60.544 50.000 0.00 0.00 35.05 4.02
945 3593 0.642156 ATTTCCTCCCCATTTCCCCC 59.358 55.000 0.00 0.00 0.00 5.40
946 3594 1.008327 ACATTTCCTCCCCATTTCCCC 59.992 52.381 0.00 0.00 0.00 4.81
947 3595 2.110578 CACATTTCCTCCCCATTTCCC 58.889 52.381 0.00 0.00 0.00 3.97
948 3596 2.110578 CCACATTTCCTCCCCATTTCC 58.889 52.381 0.00 0.00 0.00 3.13
949 3597 1.482182 GCCACATTTCCTCCCCATTTC 59.518 52.381 0.00 0.00 0.00 2.17
950 3598 1.203288 TGCCACATTTCCTCCCCATTT 60.203 47.619 0.00 0.00 0.00 2.32
951 3599 0.413037 TGCCACATTTCCTCCCCATT 59.587 50.000 0.00 0.00 0.00 3.16
952 3600 0.413037 TTGCCACATTTCCTCCCCAT 59.587 50.000 0.00 0.00 0.00 4.00
953 3601 0.251742 CTTGCCACATTTCCTCCCCA 60.252 55.000 0.00 0.00 0.00 4.96
954 3602 0.251787 ACTTGCCACATTTCCTCCCC 60.252 55.000 0.00 0.00 0.00 4.81
955 3603 1.273327 CAACTTGCCACATTTCCTCCC 59.727 52.381 0.00 0.00 0.00 4.30
956 3604 1.337167 GCAACTTGCCACATTTCCTCC 60.337 52.381 1.95 0.00 37.42 4.30
957 3605 1.340889 TGCAACTTGCCACATTTCCTC 59.659 47.619 11.29 0.00 44.23 3.71
958 3606 1.412079 TGCAACTTGCCACATTTCCT 58.588 45.000 11.29 0.00 44.23 3.36
959 3607 2.340337 GATGCAACTTGCCACATTTCC 58.660 47.619 11.29 0.00 44.23 3.13
960 3608 1.987770 CGATGCAACTTGCCACATTTC 59.012 47.619 11.29 0.00 44.23 2.17
1345 4361 2.459710 GGGGGAGGAAGGAGGGAA 59.540 66.667 0.00 0.00 0.00 3.97
1395 4427 0.738975 TCCATCTCTCGCGACGAAAT 59.261 50.000 3.71 0.00 34.74 2.17
1396 4428 0.179171 GTCCATCTCTCGCGACGAAA 60.179 55.000 3.71 0.00 34.74 3.46
1397 4429 1.428219 GTCCATCTCTCGCGACGAA 59.572 57.895 3.71 0.00 34.74 3.85
1433 4465 2.169352 AGGAAGAGCACATTAGCGTCAT 59.831 45.455 0.00 0.00 40.15 3.06
1437 4469 2.468831 GAGAGGAAGAGCACATTAGCG 58.531 52.381 0.00 0.00 40.15 4.26
1447 4479 1.905215 TCTGCAAAGGGAGAGGAAGAG 59.095 52.381 0.00 0.00 36.47 2.85
1502 4534 3.703127 GAAGCGACCCGGGAAGGT 61.703 66.667 32.02 22.74 45.12 3.50
1525 4557 5.985526 AAAACAGAAAACAAGACGAAACG 57.014 34.783 0.00 0.00 0.00 3.60
1749 4781 3.207669 CTGGCAGCATTCCCGAGC 61.208 66.667 0.00 0.00 0.00 5.03
1846 4878 5.324784 TGCTACTGTACTGGTACAAGATG 57.675 43.478 3.64 5.89 44.47 2.90
1855 4887 4.100035 TCCATCATCTTGCTACTGTACTGG 59.900 45.833 4.66 0.00 0.00 4.00
1856 4888 5.268118 TCCATCATCTTGCTACTGTACTG 57.732 43.478 0.00 0.00 0.00 2.74
1900 4933 1.358152 ATGTCCGGAACAAGGAAGGA 58.642 50.000 5.23 0.00 42.37 3.36
1931 4964 7.547227 ACAATACTGGGAAATGCATAAAAGTC 58.453 34.615 0.00 0.00 0.00 3.01
1963 4996 2.158505 CCGATCCACTACCCTCTAAGGA 60.159 54.545 0.00 0.00 37.67 3.36
1974 5007 3.596214 GAAGAAAACTGCCGATCCACTA 58.404 45.455 0.00 0.00 0.00 2.74
1998 5031 9.401058 AGATAAACTAAAATCTGGACCAATGAG 57.599 33.333 0.00 0.00 31.25 2.90
2030 5063 3.480470 CCACATCCATCATCTTGGTACC 58.520 50.000 4.43 4.43 38.01 3.34
2034 5067 1.679680 GTGCCACATCCATCATCTTGG 59.320 52.381 0.00 0.00 38.18 3.61
2051 5084 2.223805 CCCCAAACTGAGAACTTTGTGC 60.224 50.000 0.00 0.00 0.00 4.57
2089 5122 6.857964 GTCATCACAGACCAAAATAACAACTG 59.142 38.462 0.00 0.00 32.36 3.16
2102 5137 3.851976 ACGAGTTAGTCATCACAGACC 57.148 47.619 0.00 0.00 39.34 3.85
2103 5138 6.366315 AGATACGAGTTAGTCATCACAGAC 57.634 41.667 0.00 0.00 38.81 3.51
2104 5139 8.678593 AATAGATACGAGTTAGTCATCACAGA 57.321 34.615 0.00 0.00 0.00 3.41
2105 5140 8.779303 AGAATAGATACGAGTTAGTCATCACAG 58.221 37.037 0.00 0.00 0.00 3.66
2106 5141 8.678593 AGAATAGATACGAGTTAGTCATCACA 57.321 34.615 0.00 0.00 0.00 3.58
2107 5142 9.388346 CAAGAATAGATACGAGTTAGTCATCAC 57.612 37.037 0.00 0.00 0.00 3.06
2108 5143 9.121658 ACAAGAATAGATACGAGTTAGTCATCA 57.878 33.333 0.00 0.00 0.00 3.07
2109 5144 9.388346 CACAAGAATAGATACGAGTTAGTCATC 57.612 37.037 0.00 0.00 0.00 2.92
2110 5145 8.353684 CCACAAGAATAGATACGAGTTAGTCAT 58.646 37.037 0.00 0.00 0.00 3.06
2116 5151 5.452077 GCTCCCACAAGAATAGATACGAGTT 60.452 44.000 0.00 0.00 0.00 3.01
2321 5356 6.932356 ATATTCCAATTACACTCTGCACTG 57.068 37.500 0.00 0.00 0.00 3.66
2327 5362 9.533831 AGGAACAAAATATTCCAATTACACTCT 57.466 29.630 6.55 0.00 46.98 3.24
2451 5487 7.716998 CAGATCTAATAGTACATGCCAGGTTTT 59.283 37.037 0.00 0.00 0.00 2.43
2516 5552 4.006989 CCACAGTTCATGGTTTTCGGATA 58.993 43.478 0.00 0.00 32.08 2.59
2520 5556 1.269448 CCCCACAGTTCATGGTTTTCG 59.731 52.381 0.00 0.00 35.23 3.46
2546 5582 5.376625 ACCATGAATTAAGGCGATACATGT 58.623 37.500 2.69 2.69 34.01 3.21
2567 5603 6.683974 TTAATAGCAGAGCATTCAGAAACC 57.316 37.500 0.00 0.00 0.00 3.27
2643 5679 7.023575 GCTCGTAATCACATTTCAGTTTTGAT 58.976 34.615 0.00 0.00 32.27 2.57
2680 5716 4.749245 AAAACACACAGGATCGACAATC 57.251 40.909 0.00 0.00 0.00 2.67
2687 5723 3.115554 GTGCACAAAAACACACAGGATC 58.884 45.455 13.17 0.00 36.77 3.36
2688 5724 2.495270 TGTGCACAAAAACACACAGGAT 59.505 40.909 19.28 0.00 41.67 3.24
2689 5725 1.889170 TGTGCACAAAAACACACAGGA 59.111 42.857 19.28 0.00 41.67 3.86
2690 5726 2.360553 TGTGCACAAAAACACACAGG 57.639 45.000 19.28 0.00 41.67 4.00
2695 5731 3.163630 ACCAGATGTGCACAAAAACAC 57.836 42.857 25.72 10.91 37.31 3.32
2696 5732 3.056250 ACAACCAGATGTGCACAAAAACA 60.056 39.130 25.72 0.00 30.82 2.83
2697 5733 3.520569 ACAACCAGATGTGCACAAAAAC 58.479 40.909 25.72 15.07 30.82 2.43
2701 5737 2.159128 CCAAACAACCAGATGTGCACAA 60.159 45.455 25.72 7.59 32.81 3.33
2739 5783 3.733988 GCAGGATCATGTTGCAAGATGTG 60.734 47.826 29.39 22.42 37.75 3.21
2740 5784 2.426024 GCAGGATCATGTTGCAAGATGT 59.574 45.455 29.39 19.53 37.75 3.06
2741 5785 2.223735 GGCAGGATCATGTTGCAAGATG 60.224 50.000 26.30 26.30 39.54 2.90
2742 5786 2.029623 GGCAGGATCATGTTGCAAGAT 58.970 47.619 9.42 2.67 39.54 2.40
2846 5899 6.980593 TCATCCTGAATCAAAATTGAACGTT 58.019 32.000 0.00 0.00 41.13 3.99
2914 5976 8.730680 GGATATAGACATAATCATTTGGCGTTT 58.269 33.333 0.00 0.00 0.00 3.60
2946 6008 8.578151 ACTTTTTGTTGTTGTACTGGTTCTAAA 58.422 29.630 0.00 0.00 0.00 1.85
2948 6010 7.690952 ACTTTTTGTTGTTGTACTGGTTCTA 57.309 32.000 0.00 0.00 0.00 2.10
2949 6011 6.584185 ACTTTTTGTTGTTGTACTGGTTCT 57.416 33.333 0.00 0.00 0.00 3.01
2950 6012 7.532571 AGTACTTTTTGTTGTTGTACTGGTTC 58.467 34.615 0.00 0.00 41.21 3.62
2951 6013 7.457024 AGTACTTTTTGTTGTTGTACTGGTT 57.543 32.000 0.00 0.00 41.21 3.67
3013 6108 4.207019 GCAAGTCTATTGTGCAAACAACAC 59.793 41.667 0.00 0.00 38.19 3.32
3035 6130 1.996191 CTGGCAAGAGACGACTAAAGC 59.004 52.381 0.00 0.00 0.00 3.51
3130 6225 4.213482 CACAGGCCAGTGACTAAAAAGTAC 59.787 45.833 23.08 0.00 42.05 2.73
3131 6226 4.141574 ACACAGGCCAGTGACTAAAAAGTA 60.142 41.667 32.53 0.00 42.05 2.24
3132 6227 3.214328 CACAGGCCAGTGACTAAAAAGT 58.786 45.455 23.08 0.00 42.05 2.66
3133 6228 3.214328 ACACAGGCCAGTGACTAAAAAG 58.786 45.455 32.53 5.13 42.05 2.27
3134 6229 3.290948 ACACAGGCCAGTGACTAAAAA 57.709 42.857 32.53 0.00 42.05 1.94
3302 6397 5.406649 TGCGCAATATTGTAAAAGAAAGGG 58.593 37.500 8.16 0.00 0.00 3.95
3321 6416 1.153958 GGCATGTTTCCTTCTGCGC 60.154 57.895 0.00 0.00 35.47 6.09
3322 6417 0.169672 CTGGCATGTTTCCTTCTGCG 59.830 55.000 0.00 0.00 35.47 5.18
3489 6584 8.279695 TGAATTGTTTGATATGTTTGTTCGTG 57.720 30.769 0.00 0.00 0.00 4.35
3530 6625 6.486657 AGTGCACATATACTGTTTGTTTGACT 59.513 34.615 21.04 0.00 35.29 3.41
3548 6643 7.041167 GGTTTGATATCTAATATGCAGTGCACA 60.041 37.037 22.44 10.06 43.04 4.57
3549 6644 7.173907 AGGTTTGATATCTAATATGCAGTGCAC 59.826 37.037 22.44 9.40 43.04 4.57
3563 6658 8.574737 GTCGTATAGTAACCAGGTTTGATATCT 58.425 37.037 11.02 3.14 0.00 1.98
3570 6665 6.606395 AGATCAGTCGTATAGTAACCAGGTTT 59.394 38.462 11.02 0.00 0.00 3.27
3571 6666 6.039493 CAGATCAGTCGTATAGTAACCAGGTT 59.961 42.308 10.50 10.50 0.00 3.50
3572 6667 5.531659 CAGATCAGTCGTATAGTAACCAGGT 59.468 44.000 0.00 0.00 0.00 4.00
3573 6668 5.048643 CCAGATCAGTCGTATAGTAACCAGG 60.049 48.000 0.00 0.00 0.00 4.45
3574 6669 5.563085 GCCAGATCAGTCGTATAGTAACCAG 60.563 48.000 0.00 0.00 0.00 4.00
3575 6670 4.277672 GCCAGATCAGTCGTATAGTAACCA 59.722 45.833 0.00 0.00 0.00 3.67
3576 6671 4.321082 GGCCAGATCAGTCGTATAGTAACC 60.321 50.000 0.00 0.00 0.00 2.85
3577 6672 4.519730 AGGCCAGATCAGTCGTATAGTAAC 59.480 45.833 5.01 0.00 0.00 2.50
3578 6673 4.519350 CAGGCCAGATCAGTCGTATAGTAA 59.481 45.833 5.01 0.00 0.00 2.24
3579 6674 4.072839 CAGGCCAGATCAGTCGTATAGTA 58.927 47.826 5.01 0.00 0.00 1.82
3580 6675 2.887783 CAGGCCAGATCAGTCGTATAGT 59.112 50.000 5.01 0.00 0.00 2.12
3581 6676 3.057876 GTCAGGCCAGATCAGTCGTATAG 60.058 52.174 5.01 0.00 0.00 1.31
3582 6677 2.885266 GTCAGGCCAGATCAGTCGTATA 59.115 50.000 5.01 0.00 0.00 1.47
3583 6678 1.683917 GTCAGGCCAGATCAGTCGTAT 59.316 52.381 5.01 0.00 0.00 3.06
3584 6679 1.103803 GTCAGGCCAGATCAGTCGTA 58.896 55.000 5.01 0.00 0.00 3.43
3585 6680 1.608717 GGTCAGGCCAGATCAGTCGT 61.609 60.000 5.01 0.00 37.17 4.34
3586 6681 1.142748 GGTCAGGCCAGATCAGTCG 59.857 63.158 5.01 0.00 37.17 4.18
3587 6682 1.524482 GGGTCAGGCCAGATCAGTC 59.476 63.158 10.96 0.00 39.65 3.51
3588 6683 1.997874 GGGGTCAGGCCAGATCAGT 60.998 63.158 10.96 0.00 39.65 3.41
3589 6684 2.750657 GGGGGTCAGGCCAGATCAG 61.751 68.421 10.96 0.00 39.65 2.90
3590 6685 2.692368 GGGGGTCAGGCCAGATCA 60.692 66.667 10.96 0.00 39.65 2.92
3591 6686 3.866582 CGGGGGTCAGGCCAGATC 61.867 72.222 5.01 1.35 39.65 2.75
3764 6865 4.819761 GCACGAGATGCGCCCTCA 62.820 66.667 21.56 0.00 46.55 3.86
4145 7718 0.178767 CGTGGAGATCATTGGAGCCA 59.821 55.000 0.00 0.00 0.00 4.75
4877 8458 1.811965 CCATCATCGTTGCCACAGAAA 59.188 47.619 0.00 0.00 0.00 2.52
5051 8632 4.508128 GGCGCCACGGAAGATCGA 62.508 66.667 24.80 0.00 0.00 3.59
5092 8673 1.816370 CGATTCTGACGGAGAACTCG 58.184 55.000 1.60 8.34 43.71 4.18
5440 9047 7.974482 TCATGATTCTAGTGGCATCTATTTG 57.026 36.000 0.00 0.00 0.00 2.32
5472 9081 5.371115 TTTGTTAGAATAGCAACAGCCAC 57.629 39.130 0.00 0.00 41.54 5.01
5541 9155 3.189287 GTCAGGTTAACAGGAACATGCTG 59.811 47.826 8.10 2.46 40.14 4.41
5585 9199 2.669391 GCTGTATGTCCTTTTGCACTGC 60.669 50.000 0.00 0.00 0.00 4.40
5737 9351 6.599244 ACAGTCAAACATATTGGACCACTATG 59.401 38.462 23.54 23.54 39.34 2.23
5763 9377 9.962783 GATACACCTACAATACTTTCTAACGAT 57.037 33.333 0.00 0.00 0.00 3.73
5837 9452 4.905429 TGAAGAAGTCGAATGATCCCAAA 58.095 39.130 0.00 0.00 0.00 3.28
5934 9549 3.941483 CTGGTTCGCTCCTTCAATAATGT 59.059 43.478 0.00 0.00 0.00 2.71
5950 9565 1.067199 CTTGCGCGCAATTCTGGTTC 61.067 55.000 42.70 5.95 35.20 3.62
5965 9580 1.421382 ACATGCATGAAAACGCTTGC 58.579 45.000 32.75 0.00 36.92 4.01
5993 9642 2.042259 CAAAGGCGCTGGCTGATCA 61.042 57.895 7.64 0.00 38.81 2.92
5994 9643 2.796651 CAAAGGCGCTGGCTGATC 59.203 61.111 7.64 0.00 38.81 2.92
5995 9644 3.446570 GCAAAGGCGCTGGCTGAT 61.447 61.111 7.64 0.00 38.81 2.90
5997 9646 4.415332 CTGCAAAGGCGCTGGCTG 62.415 66.667 7.64 6.50 45.35 4.85
5999 9648 3.903932 GAACTGCAAAGGCGCTGGC 62.904 63.158 7.64 6.77 45.35 4.85
6000 9649 1.799258 AAGAACTGCAAAGGCGCTGG 61.799 55.000 7.64 0.00 45.35 4.85
6012 9661 5.726138 GCATCATTAGAACTGCGAAGAACTG 60.726 44.000 0.00 0.00 0.00 3.16
6095 9799 0.606130 TCAATGGCGCAGTGTGTGAT 60.606 50.000 10.83 0.00 31.07 3.06
6119 9828 5.558083 CGTGAAGTTTGATCGTCATTGTTGA 60.558 40.000 0.00 0.00 0.00 3.18
6142 9851 4.677378 CCTATACGAGTCTTGAAATCAGCG 59.323 45.833 0.00 0.00 0.00 5.18
6392 13791 0.466555 AGACGAGTAGCAGCCCTAGG 60.467 60.000 0.06 0.06 0.00 3.02
6393 13792 1.874872 GTAGACGAGTAGCAGCCCTAG 59.125 57.143 0.00 0.00 0.00 3.02
6408 13807 3.057734 CGGTGGTTCAGAGTTTGTAGAC 58.942 50.000 0.00 0.00 0.00 2.59
6484 13883 6.588204 AGAATTACACCGCTCATATGGTTAA 58.412 36.000 2.13 0.00 35.96 2.01
6485 13884 6.169557 AGAATTACACCGCTCATATGGTTA 57.830 37.500 2.13 0.00 35.96 2.85
6488 13887 5.538118 TGTAGAATTACACCGCTCATATGG 58.462 41.667 2.13 0.00 34.91 2.74
6505 13904 8.969121 TGACGTCGATAGTAAATTTTGTAGAA 57.031 30.769 11.62 0.00 37.40 2.10
6664 14063 3.440173 TCATTTCTGACGCCTTCCATTTC 59.560 43.478 0.00 0.00 0.00 2.17
6666 14065 2.749621 GTCATTTCTGACGCCTTCCATT 59.250 45.455 0.00 0.00 42.24 3.16
6667 14066 2.359900 GTCATTTCTGACGCCTTCCAT 58.640 47.619 0.00 0.00 42.24 3.41
6695 14094 9.667107 GGATGCCAAGTAGCTTATATTATGTTA 57.333 33.333 0.00 0.00 0.00 2.41
6696 14095 8.163408 TGGATGCCAAGTAGCTTATATTATGTT 58.837 33.333 0.00 0.00 0.00 2.71
6697 14096 7.689299 TGGATGCCAAGTAGCTTATATTATGT 58.311 34.615 0.00 0.00 0.00 2.29
6698 14097 8.565896 TTGGATGCCAAGTAGCTTATATTATG 57.434 34.615 0.00 0.00 38.75 1.90
6699 14098 9.586732 TTTTGGATGCCAAGTAGCTTATATTAT 57.413 29.630 0.00 0.00 44.84 1.28
6700 14099 8.988546 TTTTGGATGCCAAGTAGCTTATATTA 57.011 30.769 0.00 0.00 44.84 0.98
6701 14100 7.779798 TCTTTTGGATGCCAAGTAGCTTATATT 59.220 33.333 0.00 0.00 44.84 1.28
6702 14101 7.290061 TCTTTTGGATGCCAAGTAGCTTATAT 58.710 34.615 0.00 0.00 44.84 0.86
6703 14102 6.658849 TCTTTTGGATGCCAAGTAGCTTATA 58.341 36.000 0.00 0.00 44.84 0.98
6704 14103 5.509498 TCTTTTGGATGCCAAGTAGCTTAT 58.491 37.500 0.00 0.00 44.84 1.73
6705 14104 4.917385 TCTTTTGGATGCCAAGTAGCTTA 58.083 39.130 0.00 0.00 44.84 3.09
6706 14105 3.766545 TCTTTTGGATGCCAAGTAGCTT 58.233 40.909 0.00 0.00 44.84 3.74
6707 14106 3.439857 TCTTTTGGATGCCAAGTAGCT 57.560 42.857 0.00 0.00 44.84 3.32
6708 14107 3.507622 ACTTCTTTTGGATGCCAAGTAGC 59.492 43.478 0.00 0.00 44.84 3.58
6709 14108 4.520492 ACACTTCTTTTGGATGCCAAGTAG 59.480 41.667 0.00 0.00 44.84 2.57
6710 14109 4.278170 CACACTTCTTTTGGATGCCAAGTA 59.722 41.667 0.00 0.00 44.84 2.24
6711 14110 3.068590 CACACTTCTTTTGGATGCCAAGT 59.931 43.478 0.00 0.00 44.84 3.16
6712 14111 3.553508 CCACACTTCTTTTGGATGCCAAG 60.554 47.826 0.00 0.00 44.84 3.61
6713 14112 2.364970 CCACACTTCTTTTGGATGCCAA 59.635 45.455 0.00 0.00 42.29 4.52
6714 14113 1.962807 CCACACTTCTTTTGGATGCCA 59.037 47.619 0.00 0.00 31.39 4.92
6715 14114 1.273327 CCCACACTTCTTTTGGATGCC 59.727 52.381 0.00 0.00 31.39 4.40
6716 14115 1.273327 CCCCACACTTCTTTTGGATGC 59.727 52.381 0.00 0.00 31.39 3.91
6717 14116 2.875296 TCCCCACACTTCTTTTGGATG 58.125 47.619 0.00 0.00 31.39 3.51
6718 14117 3.833559 ATCCCCACACTTCTTTTGGAT 57.166 42.857 0.00 0.00 31.39 3.41
6719 14118 4.946160 ATATCCCCACACTTCTTTTGGA 57.054 40.909 0.00 0.00 31.39 3.53
6720 14119 4.772100 ACAATATCCCCACACTTCTTTTGG 59.228 41.667 0.00 0.00 0.00 3.28
6721 14120 5.982890 ACAATATCCCCACACTTCTTTTG 57.017 39.130 0.00 0.00 0.00 2.44
6722 14121 6.994421 AAACAATATCCCCACACTTCTTTT 57.006 33.333 0.00 0.00 0.00 2.27
6723 14122 7.466804 TCTAAACAATATCCCCACACTTCTTT 58.533 34.615 0.00 0.00 0.00 2.52
6724 14123 7.027874 TCTAAACAATATCCCCACACTTCTT 57.972 36.000 0.00 0.00 0.00 2.52
6725 14124 6.443849 TCTCTAAACAATATCCCCACACTTCT 59.556 38.462 0.00 0.00 0.00 2.85
6726 14125 6.650120 TCTCTAAACAATATCCCCACACTTC 58.350 40.000 0.00 0.00 0.00 3.01
6727 14126 6.353082 CCTCTCTAAACAATATCCCCACACTT 60.353 42.308 0.00 0.00 0.00 3.16
6728 14127 5.131142 CCTCTCTAAACAATATCCCCACACT 59.869 44.000 0.00 0.00 0.00 3.55
6729 14128 5.368989 CCTCTCTAAACAATATCCCCACAC 58.631 45.833 0.00 0.00 0.00 3.82
6730 14129 4.412199 CCCTCTCTAAACAATATCCCCACA 59.588 45.833 0.00 0.00 0.00 4.17
6731 14130 4.658901 TCCCTCTCTAAACAATATCCCCAC 59.341 45.833 0.00 0.00 0.00 4.61
6732 14131 4.903149 TCCCTCTCTAAACAATATCCCCA 58.097 43.478 0.00 0.00 0.00 4.96
6733 14132 4.908481 ACTCCCTCTCTAAACAATATCCCC 59.092 45.833 0.00 0.00 0.00 4.81
6734 14133 5.743422 GCACTCCCTCTCTAAACAATATCCC 60.743 48.000 0.00 0.00 0.00 3.85
6735 14134 5.071115 AGCACTCCCTCTCTAAACAATATCC 59.929 44.000 0.00 0.00 0.00 2.59
6736 14135 6.168270 AGCACTCCCTCTCTAAACAATATC 57.832 41.667 0.00 0.00 0.00 1.63
6737 14136 6.567602 AAGCACTCCCTCTCTAAACAATAT 57.432 37.500 0.00 0.00 0.00 1.28
6738 14137 6.407074 GCTAAGCACTCCCTCTCTAAACAATA 60.407 42.308 0.00 0.00 0.00 1.90
6739 14138 4.917906 AAGCACTCCCTCTCTAAACAAT 57.082 40.909 0.00 0.00 0.00 2.71
6740 14139 4.322801 GCTAAGCACTCCCTCTCTAAACAA 60.323 45.833 0.00 0.00 0.00 2.83
6741 14140 3.195825 GCTAAGCACTCCCTCTCTAAACA 59.804 47.826 0.00 0.00 0.00 2.83
6742 14141 3.195825 TGCTAAGCACTCCCTCTCTAAAC 59.804 47.826 0.00 0.00 31.71 2.01
6743 14142 3.441101 TGCTAAGCACTCCCTCTCTAAA 58.559 45.455 0.00 0.00 31.71 1.85
6744 14143 3.101643 TGCTAAGCACTCCCTCTCTAA 57.898 47.619 0.00 0.00 31.71 2.10
6745 14144 2.828661 TGCTAAGCACTCCCTCTCTA 57.171 50.000 0.00 0.00 31.71 2.43
6746 14145 2.038659 GATGCTAAGCACTCCCTCTCT 58.961 52.381 0.00 0.00 43.04 3.10
6747 14146 1.069978 GGATGCTAAGCACTCCCTCTC 59.930 57.143 0.00 0.00 43.04 3.20
6748 14147 1.127343 GGATGCTAAGCACTCCCTCT 58.873 55.000 0.00 0.00 43.04 3.69
6749 14148 0.833287 TGGATGCTAAGCACTCCCTC 59.167 55.000 0.00 0.00 43.04 4.30
6750 14149 1.289160 TTGGATGCTAAGCACTCCCT 58.711 50.000 0.00 0.00 43.04 4.20
6751 14150 2.128771 TTTGGATGCTAAGCACTCCC 57.871 50.000 0.00 0.00 43.04 4.30
6752 14151 3.347216 TCTTTTGGATGCTAAGCACTCC 58.653 45.455 0.00 0.00 43.04 3.85
6753 14152 4.457257 ACTTCTTTTGGATGCTAAGCACTC 59.543 41.667 0.00 0.00 43.04 3.51
6754 14153 4.217118 CACTTCTTTTGGATGCTAAGCACT 59.783 41.667 0.00 0.00 43.04 4.40
6755 14154 4.022849 ACACTTCTTTTGGATGCTAAGCAC 60.023 41.667 0.00 0.00 43.04 4.40
6756 14155 4.022935 CACACTTCTTTTGGATGCTAAGCA 60.023 41.667 0.00 0.00 44.86 3.91
6757 14156 4.216257 TCACACTTCTTTTGGATGCTAAGC 59.784 41.667 0.00 0.00 0.00 3.09
6844 14247 5.483811 TCATTGGTCATTACTTTGTCGCTA 58.516 37.500 0.00 0.00 0.00 4.26
6873 14276 9.813446 CACAATCATATCTAGCAATATCTAGCA 57.187 33.333 0.00 0.00 36.77 3.49
6874 14277 9.814899 ACACAATCATATCTAGCAATATCTAGC 57.185 33.333 0.00 0.00 36.77 3.42
6879 14282 8.517878 GCCAAACACAATCATATCTAGCAATAT 58.482 33.333 0.00 0.00 0.00 1.28
6880 14283 7.501892 TGCCAAACACAATCATATCTAGCAATA 59.498 33.333 0.00 0.00 0.00 1.90
6881 14284 6.321945 TGCCAAACACAATCATATCTAGCAAT 59.678 34.615 0.00 0.00 0.00 3.56
6882 14285 5.651576 TGCCAAACACAATCATATCTAGCAA 59.348 36.000 0.00 0.00 0.00 3.91
6883 14286 5.192176 TGCCAAACACAATCATATCTAGCA 58.808 37.500 0.00 0.00 0.00 3.49
6884 14287 5.756195 TGCCAAACACAATCATATCTAGC 57.244 39.130 0.00 0.00 0.00 3.42
6885 14288 8.984891 TTTTTGCCAAACACAATCATATCTAG 57.015 30.769 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.