Multiple sequence alignment - TraesCS1A01G302800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G302800 chr1A 100.000 6004 0 0 1 6004 496444326 496438323 0.000000e+00 11088.0
1 TraesCS1A01G302800 chr1A 86.544 379 38 9 1406 1775 223827901 223827527 7.250000e-109 405.0
2 TraesCS1A01G302800 chr1A 92.437 119 9 0 14 132 496444204 496444086 2.880000e-38 171.0
3 TraesCS1A01G302800 chr1A 92.437 119 9 0 123 241 496444313 496444195 2.880000e-38 171.0
4 TraesCS1A01G302800 chr1A 83.065 124 14 3 4092 4212 496440186 496440067 8.230000e-19 106.0
5 TraesCS1A01G302800 chr1A 83.065 124 14 3 4141 4260 496440235 496440115 8.230000e-19 106.0
6 TraesCS1A01G302800 chr1A 95.122 41 2 0 4223 4263 448928302 448928262 1.400000e-06 65.8
7 TraesCS1A01G302800 chr1A 81.176 85 10 5 3683 3765 466906656 466906576 5.020000e-06 63.9
8 TraesCS1A01G302800 chr1D 93.327 2278 88 23 1 2266 400018363 400016138 0.000000e+00 3306.0
9 TraesCS1A01G302800 chr1D 95.163 1199 38 10 4314 5497 400014140 400012947 0.000000e+00 1875.0
10 TraesCS1A01G302800 chr1D 98.212 839 13 2 2884 3722 400015573 400014737 0.000000e+00 1465.0
11 TraesCS1A01G302800 chr1D 96.097 538 21 0 2346 2883 400016142 400015605 0.000000e+00 878.0
12 TraesCS1A01G302800 chr1D 97.429 389 5 1 3757 4140 400014741 400014353 0.000000e+00 658.0
13 TraesCS1A01G302800 chr1D 90.575 435 26 6 5518 5940 400011540 400011109 4.060000e-156 562.0
14 TraesCS1A01G302800 chr1D 93.694 111 7 0 131 241 400018342 400018232 3.720000e-37 167.0
15 TraesCS1A01G302800 chr1D 91.525 118 10 0 14 131 400018241 400018124 4.810000e-36 163.0
16 TraesCS1A01G302800 chr1D 97.222 72 2 0 4141 4212 400014401 400014330 8.170000e-24 122.0
17 TraesCS1A01G302800 chr1D 87.931 58 5 1 3704 3761 209519444 209519499 3.880000e-07 67.6
18 TraesCS1A01G302800 chr1D 97.368 38 1 0 4210 4247 400014176 400014139 1.400000e-06 65.8
19 TraesCS1A01G302800 chr1B 90.307 2280 135 31 22 2266 536710675 536708447 0.000000e+00 2907.0
20 TraesCS1A01G302800 chr1B 92.092 999 59 16 4346 5327 536706674 536705679 0.000000e+00 1389.0
21 TraesCS1A01G302800 chr1B 92.908 846 36 9 2884 3722 536707898 536707070 0.000000e+00 1208.0
22 TraesCS1A01G302800 chr1B 91.248 537 31 8 2347 2883 536708450 536707930 0.000000e+00 717.0
23 TraesCS1A01G302800 chr1B 92.761 373 19 4 3760 4124 536707071 536706699 3.190000e-147 532.0
24 TraesCS1A01G302800 chr1B 95.122 287 10 4 5546 5830 536699904 536699620 3.300000e-122 449.0
25 TraesCS1A01G302800 chr1B 85.151 431 51 7 1827 2252 635831266 635831688 4.300000e-116 429.0
26 TraesCS1A01G302800 chr1B 87.571 354 33 5 1445 1788 635830911 635831263 3.370000e-107 399.0
27 TraesCS1A01G302800 chr1B 92.063 126 10 0 37 162 536725782 536725657 1.720000e-40 178.0
28 TraesCS1A01G302800 chr1B 94.949 99 5 0 2253 2351 353145542 353145444 8.060000e-34 156.0
29 TraesCS1A01G302800 chr1B 94.949 99 5 0 2253 2351 436773256 436773158 8.060000e-34 156.0
30 TraesCS1A01G302800 chr1B 94.949 99 5 0 2253 2351 531755605 531755507 8.060000e-34 156.0
31 TraesCS1A01G302800 chr1B 90.909 110 10 0 22 131 536710566 536710457 1.350000e-31 148.0
32 TraesCS1A01G302800 chr1B 93.182 88 3 3 1403 1488 101247361 101247447 6.320000e-25 126.0
33 TraesCS1A01G302800 chr1B 87.931 58 5 2 3705 3762 45812221 45812166 3.880000e-07 67.6
34 TraesCS1A01G302800 chr7B 92.308 598 27 9 3067 3662 333363324 333362744 0.000000e+00 832.0
35 TraesCS1A01G302800 chr7B 91.304 598 32 9 3067 3662 102784622 102784043 0.000000e+00 798.0
36 TraesCS1A01G302800 chr7B 87.240 721 49 14 2347 3035 333364031 333363322 0.000000e+00 782.0
37 TraesCS1A01G302800 chr7B 89.286 560 45 6 1714 2266 333364579 333364028 0.000000e+00 688.0
38 TraesCS1A01G302800 chr7B 88.078 562 50 7 1714 2266 102797939 102797386 0.000000e+00 651.0
39 TraesCS1A01G302800 chr7B 90.969 454 29 4 2347 2799 102797389 102796947 8.610000e-168 601.0
40 TraesCS1A01G302800 chr7B 85.047 428 51 4 1830 2252 600922105 600921686 2.000000e-114 424.0
41 TraesCS1A01G302800 chr7B 84.579 428 53 8 1830 2252 608180511 608180092 4.330000e-111 412.0
42 TraesCS1A01G302800 chr7B 87.571 354 33 5 1445 1788 600922463 600922111 3.370000e-107 399.0
43 TraesCS1A01G302800 chr7B 87.288 354 34 5 1445 1788 608180869 608180517 1.570000e-105 394.0
44 TraesCS1A01G302800 chr7B 82.642 265 15 13 2802 3035 102784884 102784620 7.890000e-49 206.0
45 TraesCS1A01G302800 chr7B 91.736 121 8 1 4223 4343 69587517 69587399 3.720000e-37 167.0
46 TraesCS1A01G302800 chr7B 94.949 99 5 0 2253 2351 151808465 151808367 8.060000e-34 156.0
47 TraesCS1A01G302800 chr7B 96.591 88 2 1 4264 4350 162120891 162120804 1.740000e-30 145.0
48 TraesCS1A01G302800 chr7B 94.318 88 2 3 1403 1488 721431442 721431528 1.360000e-26 132.0
49 TraesCS1A01G302800 chr7B 92.045 88 4 3 1403 1488 535230786 535230700 2.940000e-23 121.0
50 TraesCS1A01G302800 chr4B 91.472 598 29 11 3067 3662 617876471 617875894 0.000000e+00 802.0
51 TraesCS1A01G302800 chr4B 88.036 560 52 6 1714 2266 617879614 617879063 0.000000e+00 649.0
52 TraesCS1A01G302800 chr4B 89.696 427 26 5 2347 2772 617879066 617878657 4.120000e-146 529.0
53 TraesCS1A01G302800 chr4B 84.244 311 18 16 2756 3035 617876779 617876469 2.130000e-69 274.0
54 TraesCS1A01G302800 chr4B 94.949 99 5 0 2253 2351 30654645 30654547 8.060000e-34 156.0
55 TraesCS1A01G302800 chr4B 97.590 83 2 0 4264 4346 511163788 511163706 6.270000e-30 143.0
56 TraesCS1A01G302800 chr4B 93.182 88 3 3 1403 1488 35026803 35026717 6.320000e-25 126.0
57 TraesCS1A01G302800 chr6A 86.451 679 68 11 1601 2266 87534441 87533774 0.000000e+00 723.0
58 TraesCS1A01G302800 chr6A 93.750 80 5 0 2347 2426 87533777 87533698 2.940000e-23 121.0
59 TraesCS1A01G302800 chr6A 87.931 58 5 1 3705 3762 131446724 131446779 3.880000e-07 67.6
60 TraesCS1A01G302800 chr7A 86.263 677 65 12 1601 2260 653265289 653265954 0.000000e+00 710.0
61 TraesCS1A01G302800 chr7A 85.778 675 70 12 1601 2260 310580685 310581348 0.000000e+00 691.0
62 TraesCS1A01G302800 chr7A 95.000 80 4 0 2347 2426 310581351 310581430 6.320000e-25 126.0
63 TraesCS1A01G302800 chr4A 86.050 681 69 12 1601 2266 101822914 101822245 0.000000e+00 708.0
64 TraesCS1A01G302800 chr4A 91.553 367 23 7 527 892 721670777 721671136 3.230000e-137 499.0
65 TraesCS1A01G302800 chr4A 98.765 81 1 0 4264 4344 37060191 37060111 1.740000e-30 145.0
66 TraesCS1A01G302800 chr4A 91.262 103 7 2 2246 2348 681667433 681667333 8.110000e-29 139.0
67 TraesCS1A01G302800 chr4A 92.500 80 6 0 2347 2426 101822248 101822169 1.370000e-21 115.0
68 TraesCS1A01G302800 chr4A 97.436 39 1 0 902 940 721671132 721671170 3.880000e-07 67.6
69 TraesCS1A01G302800 chrUn 85.514 428 49 4 1830 2252 349787027 349786608 9.240000e-118 435.0
70 TraesCS1A01G302800 chrUn 86.723 354 36 5 1445 1788 349787385 349787033 3.400000e-102 383.0
71 TraesCS1A01G302800 chr3A 87.895 380 31 9 1406 1775 38993333 38992959 3.320000e-117 433.0
72 TraesCS1A01G302800 chr3A 86.538 364 35 8 1445 1798 452377035 452376676 7.300000e-104 388.0
73 TraesCS1A01G302800 chr3A 100.000 81 0 0 4264 4344 470095699 470095779 3.750000e-32 150.0
74 TraesCS1A01G302800 chr3A 94.624 93 4 1 2256 2348 40654523 40654432 6.270000e-30 143.0
75 TraesCS1A01G302800 chr3A 82.979 141 16 7 1150 1290 452378494 452378362 2.940000e-23 121.0
76 TraesCS1A01G302800 chr5B 92.308 182 13 1 527 708 468933674 468933494 2.150000e-64 257.0
77 TraesCS1A01G302800 chr5B 100.000 80 0 0 4264 4343 166379103 166379182 1.350000e-31 148.0
78 TraesCS1A01G302800 chr5B 92.079 101 8 0 2251 2351 77541425 77541325 6.270000e-30 143.0
79 TraesCS1A01G302800 chr5B 91.489 94 6 2 2255 2348 498918324 498918233 1.760000e-25 128.0
80 TraesCS1A01G302800 chr5B 82.979 141 16 7 1150 1290 119151442 119151574 2.940000e-23 121.0
81 TraesCS1A01G302800 chr5B 89.474 57 4 1 3705 3761 339290319 339290265 3.000000e-08 71.3
82 TraesCS1A01G302800 chr5B 86.364 66 6 3 3705 3770 530930067 530930129 1.080000e-07 69.4
83 TraesCS1A01G302800 chr5B 87.931 58 5 1 3704 3761 203503105 203503050 3.880000e-07 67.6
84 TraesCS1A01G302800 chr5B 87.931 58 5 1 3704 3761 440026069 440026014 3.880000e-07 67.6
85 TraesCS1A01G302800 chr3D 89.305 187 12 5 1150 1336 440054569 440054391 1.680000e-55 228.0
86 TraesCS1A01G302800 chr3D 93.103 87 4 2 1403 1488 440054369 440054284 6.320000e-25 126.0
87 TraesCS1A01G302800 chr3D 92.000 50 3 1 4222 4270 545226022 545225973 1.080000e-07 69.4
88 TraesCS1A01G302800 chr2B 98.876 89 1 0 2260 2348 219295500 219295412 6.230000e-35 159.0
89 TraesCS1A01G302800 chr2B 94.949 99 5 0 2253 2351 251426992 251426894 8.060000e-34 156.0
90 TraesCS1A01G302800 chr2B 94.949 99 5 0 2253 2351 703221602 703221504 8.060000e-34 156.0
91 TraesCS1A01G302800 chr2B 92.857 98 7 0 2251 2348 722175253 722175350 6.270000e-30 143.0
92 TraesCS1A01G302800 chr6B 94.949 99 5 0 2253 2351 649061287 649061189 8.060000e-34 156.0
93 TraesCS1A01G302800 chr6B 91.919 99 7 1 2251 2348 409001627 409001725 2.920000e-28 137.0
94 TraesCS1A01G302800 chr6B 91.176 102 7 2 2248 2348 544634124 544634224 2.920000e-28 137.0
95 TraesCS1A01G302800 chr6B 90.909 99 7 2 2250 2348 680897681 680897585 1.360000e-26 132.0
96 TraesCS1A01G302800 chr5D 98.750 80 1 0 4264 4343 139440995 139440916 6.270000e-30 143.0
97 TraesCS1A01G302800 chr5D 100.000 35 0 0 4228 4262 353483065 353483031 1.400000e-06 65.8
98 TraesCS1A01G302800 chr5D 94.444 36 2 0 4222 4257 563855529 563855494 8.410000e-04 56.5
99 TraesCS1A01G302800 chr4D 97.619 84 1 1 4264 4346 414999642 414999559 6.270000e-30 143.0
100 TraesCS1A01G302800 chr4D 93.182 44 1 2 4221 4264 365508452 365508493 5.020000e-06 63.9
101 TraesCS1A01G302800 chr2A 86.777 121 15 1 4223 4343 706757396 706757277 3.780000e-27 134.0
102 TraesCS1A01G302800 chr3B 90.909 99 7 2 2251 2348 749683500 749683597 1.360000e-26 132.0
103 TraesCS1A01G302800 chr3B 93.182 88 3 3 1403 1488 154413679 154413593 6.320000e-25 126.0
104 TraesCS1A01G302800 chr3B 92.308 52 3 1 4220 4270 591457273 591457324 8.350000e-09 73.1
105 TraesCS1A01G302800 chr7D 88.136 59 5 2 3705 3763 395073721 395073665 1.080000e-07 69.4
106 TraesCS1A01G302800 chr6D 100.000 29 0 0 4186 4214 313167069 313167097 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G302800 chr1A 496438323 496444326 6003 True 11088.000000 11088 100.000000 1 6004 1 chr1A.!!$R4 6003
1 TraesCS1A01G302800 chr1D 400011109 400018363 7254 True 926.180000 3306 95.061200 1 5940 10 chr1D.!!$R1 5939
2 TraesCS1A01G302800 chr1B 536705679 536710675 4996 True 1150.166667 2907 91.704167 22 5327 6 chr1B.!!$R7 5305
3 TraesCS1A01G302800 chr1B 635830911 635831688 777 False 414.000000 429 86.361000 1445 2252 2 chr1B.!!$F2 807
4 TraesCS1A01G302800 chr7B 333362744 333364579 1835 True 767.333333 832 89.611333 1714 3662 3 chr7B.!!$R7 1948
5 TraesCS1A01G302800 chr7B 102796947 102797939 992 True 626.000000 651 89.523500 1714 2799 2 chr7B.!!$R6 1085
6 TraesCS1A01G302800 chr7B 102784043 102784884 841 True 502.000000 798 86.973000 2802 3662 2 chr7B.!!$R5 860
7 TraesCS1A01G302800 chr7B 600921686 600922463 777 True 411.500000 424 86.309000 1445 2252 2 chr7B.!!$R8 807
8 TraesCS1A01G302800 chr7B 608180092 608180869 777 True 403.000000 412 85.933500 1445 2252 2 chr7B.!!$R9 807
9 TraesCS1A01G302800 chr4B 617875894 617879614 3720 True 563.500000 802 88.362000 1714 3662 4 chr4B.!!$R4 1948
10 TraesCS1A01G302800 chr6A 87533698 87534441 743 True 422.000000 723 90.100500 1601 2426 2 chr6A.!!$R1 825
11 TraesCS1A01G302800 chr7A 653265289 653265954 665 False 710.000000 710 86.263000 1601 2260 1 chr7A.!!$F1 659
12 TraesCS1A01G302800 chr7A 310580685 310581430 745 False 408.500000 691 90.389000 1601 2426 2 chr7A.!!$F2 825
13 TraesCS1A01G302800 chr4A 101822169 101822914 745 True 411.500000 708 89.275000 1601 2426 2 chr4A.!!$R3 825
14 TraesCS1A01G302800 chrUn 349786608 349787385 777 True 409.000000 435 86.118500 1445 2252 2 chrUn.!!$R1 807
15 TraesCS1A01G302800 chr3A 452376676 452378494 1818 True 254.500000 388 84.758500 1150 1798 2 chr3A.!!$R3 648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
781 783 1.403249 GCACAACATCAAGACATGCCC 60.403 52.381 0.0 0.0 0.0 5.36 F
1945 3176 0.106708 GCCAGAGATAATGCGGGTGA 59.893 55.000 0.0 0.0 0.0 4.02 F
2277 3511 0.178955 TGTGTACTCCCTCCGTTCCA 60.179 55.000 0.0 0.0 0.0 3.53 F
2661 3896 0.401738 TTCCACCTTTCCCTCTGCTG 59.598 55.000 0.0 0.0 0.0 4.41 F
3646 6825 0.617413 CTCACTCTGGAACCTGGCAT 59.383 55.000 0.0 0.0 0.0 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2479 3713 0.694771 AGCTCTGTCTCCATGGCAAA 59.305 50.000 6.96 0.0 0.0 3.68 R
3798 6982 0.309922 CAGGCTTGCTGAACACACTG 59.690 55.000 0.00 0.0 0.0 3.66 R
4101 7293 2.302260 TGCTAATCTCTGGAGGACTCG 58.698 52.381 0.00 0.0 0.0 4.18 R
4230 7476 2.675844 TGCGACAGTTATTTTGGATCGG 59.324 45.455 0.00 0.0 0.0 4.18 R
5523 8849 0.178926 TCGACACCCTTTCCCCTACA 60.179 55.000 0.00 0.0 0.0 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.113411 GTGGCCTAAATGTGTCACTAGTTAT 58.887 40.000 3.32 0.00 0.00 1.89
34 35 7.492669 CCTAAATGTGTCACTAGTTATGACCTG 59.507 40.741 4.27 0.00 44.91 4.00
148 149 2.313041 ACCCTAGTTACGACCTACCCTT 59.687 50.000 0.00 0.00 0.00 3.95
166 167 2.607282 CCTTGCGATACGACACTATCCC 60.607 54.545 0.00 0.00 0.00 3.85
171 172 3.057456 GCGATACGACACTATCCCATCTT 60.057 47.826 0.00 0.00 0.00 2.40
243 244 2.044946 GGTGCATGTGACCCTCCC 60.045 66.667 5.03 0.00 0.00 4.30
376 377 6.011476 AGATCATCACATCACGACTATCTG 57.989 41.667 0.00 0.00 0.00 2.90
420 421 2.158871 AGTACTCACCAACCGCTCAAAA 60.159 45.455 0.00 0.00 0.00 2.44
445 446 1.475280 GGGCCACCGAATTCTAAAACC 59.525 52.381 4.39 0.00 0.00 3.27
446 447 2.164338 GGCCACCGAATTCTAAAACCA 58.836 47.619 0.00 0.00 0.00 3.67
447 448 2.094906 GGCCACCGAATTCTAAAACCAC 60.095 50.000 0.00 0.00 0.00 4.16
465 466 3.135895 ACCACTGGCTATATTACCACCAC 59.864 47.826 0.00 0.00 0.00 4.16
467 468 4.384757 CCACTGGCTATATTACCACCACAA 60.385 45.833 0.00 0.00 0.00 3.33
493 494 3.503363 TCCAACAGTAACTCGACGTGTAT 59.497 43.478 2.59 0.00 0.00 2.29
525 526 5.013568 TCAACGAACCGACAATATGGTAT 57.986 39.130 0.00 0.00 37.54 2.73
562 563 3.192212 CACCCTCTTTTCCAGCAAAGATC 59.808 47.826 0.00 0.00 41.06 2.75
566 567 4.378874 CCTCTTTTCCAGCAAAGATCGAAC 60.379 45.833 0.00 0.00 41.06 3.95
642 644 2.802816 GGTAATGAAGCCAGTCATAGCG 59.197 50.000 0.00 0.00 37.25 4.26
718 720 8.585018 GTTTGCTATAATAAGCCCAATACCATT 58.415 33.333 0.00 0.00 42.05 3.16
719 721 8.719645 TTGCTATAATAAGCCCAATACCATTT 57.280 30.769 0.00 0.00 42.05 2.32
767 769 1.523934 GCAAAGCTTCATGTGCACAAC 59.476 47.619 25.72 11.05 36.97 3.32
781 783 1.403249 GCACAACATCAAGACATGCCC 60.403 52.381 0.00 0.00 0.00 5.36
826 828 7.234355 AGGAATTTATTCACAGATATGGACCC 58.766 38.462 4.97 0.00 38.53 4.46
857 862 4.079901 TGGTAGTCCTCTGGGAGTAGTAAG 60.080 50.000 0.37 0.00 45.24 2.34
858 863 4.079844 GGTAGTCCTCTGGGAGTAGTAAGT 60.080 50.000 0.37 0.00 45.24 2.24
860 865 5.793034 AGTCCTCTGGGAGTAGTAAGTAA 57.207 43.478 0.00 0.00 43.03 2.24
862 867 6.559429 AGTCCTCTGGGAGTAGTAAGTAAAA 58.441 40.000 0.00 0.00 43.03 1.52
864 869 7.178805 AGTCCTCTGGGAGTAGTAAGTAAAAAG 59.821 40.741 0.00 0.00 43.03 2.27
867 872 7.363968 CCTCTGGGAGTAGTAAGTAAAAAGAGG 60.364 44.444 0.00 0.00 39.82 3.69
868 873 6.439692 TCTGGGAGTAGTAAGTAAAAAGAGGG 59.560 42.308 0.00 0.00 0.00 4.30
869 874 5.486419 TGGGAGTAGTAAGTAAAAAGAGGGG 59.514 44.000 0.00 0.00 0.00 4.79
874 879 9.565090 GAGTAGTAAGTAAAAAGAGGGGAAAAA 57.435 33.333 0.00 0.00 0.00 1.94
1186 1219 3.411351 CGTTCGGTTGTGGCTCCG 61.411 66.667 0.00 0.00 46.93 4.63
1188 1221 2.029964 TTCGGTTGTGGCTCCGTC 59.970 61.111 3.64 0.00 45.88 4.79
1341 1378 2.034066 TAAGGACGGTCGGACGGT 59.966 61.111 19.57 19.57 38.39 4.83
1398 1459 1.814793 GCCGCCTTCTTCTTCTTCTT 58.185 50.000 0.00 0.00 0.00 2.52
1400 1461 2.614229 GCCGCCTTCTTCTTCTTCTTCT 60.614 50.000 0.00 0.00 0.00 2.85
1403 1464 4.562552 CCGCCTTCTTCTTCTTCTTCTTCT 60.563 45.833 0.00 0.00 0.00 2.85
1406 1467 6.230472 GCCTTCTTCTTCTTCTTCTTCTTCT 58.770 40.000 0.00 0.00 0.00 2.85
1497 2702 1.153127 TCTGTTTTTCCGTGCCCGT 60.153 52.632 0.00 0.00 0.00 5.28
1537 2751 1.878522 CGCCGCAGCTACTACTTGG 60.879 63.158 0.00 0.00 36.60 3.61
1609 2824 1.268625 CAATCTGCAGCAAGCTGTTGA 59.731 47.619 21.75 18.84 45.24 3.18
1741 2957 2.783135 TCTCTCCTGTTGATGCAAACC 58.217 47.619 0.00 0.00 0.00 3.27
1790 3006 2.125753 CGCAGCCCTCTGTGTCTC 60.126 66.667 0.00 0.00 43.83 3.36
1792 3008 1.217779 GCAGCCCTCTGTGTCTCTC 59.782 63.158 0.00 0.00 42.29 3.20
1945 3176 0.106708 GCCAGAGATAATGCGGGTGA 59.893 55.000 0.00 0.00 0.00 4.02
2052 3283 1.413812 CCCCCAATGCCTAATTTCTGC 59.586 52.381 0.00 0.00 0.00 4.26
2114 3345 6.201044 CCAGAGGTAATTGCGTTAGTTATCTG 59.799 42.308 0.00 0.00 0.00 2.90
2115 3346 6.978659 CAGAGGTAATTGCGTTAGTTATCTGA 59.021 38.462 0.00 0.00 32.92 3.27
2262 3496 5.920273 GCTACTTTGTGCATGTTAATTGTGT 59.080 36.000 0.00 0.00 0.00 3.72
2263 3497 7.040755 AGCTACTTTGTGCATGTTAATTGTGTA 60.041 33.333 0.00 0.00 0.00 2.90
2264 3498 7.060633 GCTACTTTGTGCATGTTAATTGTGTAC 59.939 37.037 0.00 0.00 0.00 2.90
2265 3499 7.038154 ACTTTGTGCATGTTAATTGTGTACT 57.962 32.000 0.00 0.00 31.08 2.73
2266 3500 7.138736 ACTTTGTGCATGTTAATTGTGTACTC 58.861 34.615 0.00 0.00 31.08 2.59
2267 3501 5.621197 TGTGCATGTTAATTGTGTACTCC 57.379 39.130 0.00 0.00 31.08 3.85
2268 3502 4.457603 TGTGCATGTTAATTGTGTACTCCC 59.542 41.667 0.00 0.00 31.08 4.30
2269 3503 4.700213 GTGCATGTTAATTGTGTACTCCCT 59.300 41.667 0.00 0.00 0.00 4.20
2270 3504 4.941263 TGCATGTTAATTGTGTACTCCCTC 59.059 41.667 0.00 0.00 0.00 4.30
2271 3505 4.335594 GCATGTTAATTGTGTACTCCCTCC 59.664 45.833 0.00 0.00 0.00 4.30
2272 3506 4.196626 TGTTAATTGTGTACTCCCTCCG 57.803 45.455 0.00 0.00 0.00 4.63
2273 3507 3.579586 TGTTAATTGTGTACTCCCTCCGT 59.420 43.478 0.00 0.00 0.00 4.69
2274 3508 4.040706 TGTTAATTGTGTACTCCCTCCGTT 59.959 41.667 0.00 0.00 0.00 4.44
2275 3509 3.329929 AATTGTGTACTCCCTCCGTTC 57.670 47.619 0.00 0.00 0.00 3.95
2276 3510 0.971386 TTGTGTACTCCCTCCGTTCC 59.029 55.000 0.00 0.00 0.00 3.62
2277 3511 0.178955 TGTGTACTCCCTCCGTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
2278 3512 0.971386 GTGTACTCCCTCCGTTCCAA 59.029 55.000 0.00 0.00 0.00 3.53
2279 3513 1.345415 GTGTACTCCCTCCGTTCCAAA 59.655 52.381 0.00 0.00 0.00 3.28
2280 3514 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
2281 3515 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
2282 3516 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
2283 3517 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2284 3518 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2285 3519 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2286 3520 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2287 3521 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2288 3522 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2289 3523 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2290 3524 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2291 3525 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2292 3526 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2293 3527 4.644685 CCGTTCCAAAATAGATGACCCAAT 59.355 41.667 0.00 0.00 0.00 3.16
2294 3528 5.127031 CCGTTCCAAAATAGATGACCCAATT 59.873 40.000 0.00 0.00 0.00 2.32
2295 3529 6.350949 CCGTTCCAAAATAGATGACCCAATTT 60.351 38.462 0.00 0.00 0.00 1.82
2296 3530 7.096551 CGTTCCAAAATAGATGACCCAATTTT 58.903 34.615 0.00 0.00 33.07 1.82
2297 3531 7.063308 CGTTCCAAAATAGATGACCCAATTTTG 59.937 37.037 10.80 10.80 43.77 2.44
2298 3532 7.552050 TCCAAAATAGATGACCCAATTTTGT 57.448 32.000 14.67 0.00 43.14 2.83
2299 3533 8.657387 TCCAAAATAGATGACCCAATTTTGTA 57.343 30.769 14.67 1.18 43.14 2.41
2300 3534 8.527810 TCCAAAATAGATGACCCAATTTTGTAC 58.472 33.333 14.67 0.00 43.14 2.90
2301 3535 8.531146 CCAAAATAGATGACCCAATTTTGTACT 58.469 33.333 14.67 0.00 43.14 2.73
2338 3572 7.611213 AAGTTGGGTCATCTATTTTAGAACG 57.389 36.000 0.00 0.00 38.50 3.95
2339 3573 6.113411 AGTTGGGTCATCTATTTTAGAACGG 58.887 40.000 0.00 0.00 38.50 4.44
2340 3574 5.943349 TGGGTCATCTATTTTAGAACGGA 57.057 39.130 0.00 0.00 38.50 4.69
2341 3575 5.914033 TGGGTCATCTATTTTAGAACGGAG 58.086 41.667 0.00 0.00 38.50 4.63
2342 3576 5.163343 TGGGTCATCTATTTTAGAACGGAGG 60.163 44.000 0.00 0.00 38.50 4.30
2343 3577 5.070047 GGGTCATCTATTTTAGAACGGAGGA 59.930 44.000 0.00 0.00 38.50 3.71
2344 3578 6.407752 GGGTCATCTATTTTAGAACGGAGGAA 60.408 42.308 0.00 0.00 38.50 3.36
2345 3579 6.702282 GGTCATCTATTTTAGAACGGAGGAAG 59.298 42.308 0.00 0.00 38.50 3.46
2369 3603 8.248117 AGTACTTGTGTATCATTCCGTTTAAC 57.752 34.615 0.00 0.00 0.00 2.01
2614 3849 0.457035 ACAAAGTTGCAGTGCACTGG 59.543 50.000 39.92 26.45 43.94 4.00
2646 3881 5.701224 ACAGGTTCCTTTTATTCTGTTCCA 58.299 37.500 0.00 0.00 32.34 3.53
2661 3896 0.401738 TTCCACCTTTCCCTCTGCTG 59.598 55.000 0.00 0.00 0.00 4.41
2673 3908 1.133790 CCTCTGCTGTAAATGCTTGCC 59.866 52.381 0.00 0.00 0.00 4.52
2697 3932 5.390356 CGAAAATTGGCAAGTCTCTCTCTTC 60.390 44.000 5.96 1.15 0.00 2.87
2883 6012 9.793259 TCAAACTGAAGTTCTATAAATTCTGGT 57.207 29.630 4.17 3.68 39.33 4.00
2884 6013 9.831737 CAAACTGAAGTTCTATAAATTCTGGTG 57.168 33.333 4.17 6.33 37.51 4.17
2885 6014 8.567285 AACTGAAGTTCTATAAATTCTGGTGG 57.433 34.615 4.17 0.00 40.67 4.61
2886 6015 7.918076 ACTGAAGTTCTATAAATTCTGGTGGA 58.082 34.615 4.17 0.00 40.67 4.02
2936 6095 8.806429 TTGCTCCTGTTTTAGAATTCATATCA 57.194 30.769 8.44 0.00 0.00 2.15
3443 6613 7.849804 ACTTGCAATGTTTACTAGTATGGAG 57.150 36.000 2.79 0.00 0.00 3.86
3462 6641 9.982651 GTATGGAGTCATTATTTACTCTGCTTA 57.017 33.333 0.00 0.00 41.53 3.09
3464 6643 8.079211 TGGAGTCATTATTTACTCTGCTTACT 57.921 34.615 0.00 0.00 41.53 2.24
3465 6644 8.198109 TGGAGTCATTATTTACTCTGCTTACTC 58.802 37.037 0.00 0.00 41.53 2.59
3466 6645 8.417884 GGAGTCATTATTTACTCTGCTTACTCT 58.582 37.037 0.00 0.00 41.53 3.24
3467 6646 9.243637 GAGTCATTATTTACTCTGCTTACTCTG 57.756 37.037 0.00 0.00 39.24 3.35
3468 6647 7.708752 AGTCATTATTTACTCTGCTTACTCTGC 59.291 37.037 0.00 0.00 0.00 4.26
3469 6648 7.708752 GTCATTATTTACTCTGCTTACTCTGCT 59.291 37.037 0.00 0.00 0.00 4.24
3470 6649 8.260818 TCATTATTTACTCTGCTTACTCTGCTT 58.739 33.333 0.00 0.00 0.00 3.91
3471 6650 7.834068 TTATTTACTCTGCTTACTCTGCTTG 57.166 36.000 0.00 0.00 0.00 4.01
3472 6651 4.873746 TTACTCTGCTTACTCTGCTTGT 57.126 40.909 0.00 0.00 0.00 3.16
3646 6825 0.617413 CTCACTCTGGAACCTGGCAT 59.383 55.000 0.00 0.00 0.00 4.40
3734 6913 6.681729 AAGTTATACTTCCTGGTTGAGTCA 57.318 37.500 0.00 0.00 31.77 3.41
3735 6914 6.038997 AGTTATACTTCCTGGTTGAGTCAC 57.961 41.667 0.00 0.00 0.00 3.67
3736 6915 5.780793 AGTTATACTTCCTGGTTGAGTCACT 59.219 40.000 0.00 0.00 0.00 3.41
3737 6916 6.270231 AGTTATACTTCCTGGTTGAGTCACTT 59.730 38.462 0.00 0.00 0.00 3.16
3738 6917 7.453752 AGTTATACTTCCTGGTTGAGTCACTTA 59.546 37.037 0.00 0.00 0.00 2.24
3739 6918 6.875972 ATACTTCCTGGTTGAGTCACTTAT 57.124 37.500 0.00 0.00 0.00 1.73
3740 6919 5.568620 ACTTCCTGGTTGAGTCACTTATT 57.431 39.130 0.00 0.00 0.00 1.40
3741 6920 5.941788 ACTTCCTGGTTGAGTCACTTATTT 58.058 37.500 0.00 0.00 0.00 1.40
3742 6921 6.365520 ACTTCCTGGTTGAGTCACTTATTTT 58.634 36.000 0.00 0.00 0.00 1.82
3743 6922 6.263168 ACTTCCTGGTTGAGTCACTTATTTTG 59.737 38.462 0.00 0.00 0.00 2.44
3744 6923 5.070001 TCCTGGTTGAGTCACTTATTTTGG 58.930 41.667 0.00 0.00 0.00 3.28
3745 6924 4.218417 CCTGGTTGAGTCACTTATTTTGGG 59.782 45.833 0.00 0.00 0.00 4.12
3746 6925 5.055265 TGGTTGAGTCACTTATTTTGGGA 57.945 39.130 0.00 0.00 0.00 4.37
3747 6926 4.825085 TGGTTGAGTCACTTATTTTGGGAC 59.175 41.667 0.00 0.00 0.00 4.46
3748 6927 4.083484 GGTTGAGTCACTTATTTTGGGACG 60.083 45.833 0.00 0.00 33.84 4.79
3749 6928 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
3750 6929 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
3751 6930 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
3752 6931 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3753 6932 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
3754 6933 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3755 6934 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4095 7287 6.699575 ACAAAGTAGCAAGTTGAAACATCT 57.300 33.333 7.16 0.00 0.00 2.90
4096 7288 7.100458 ACAAAGTAGCAAGTTGAAACATCTT 57.900 32.000 7.16 0.00 0.00 2.40
4097 7289 8.220755 ACAAAGTAGCAAGTTGAAACATCTTA 57.779 30.769 7.16 0.00 0.00 2.10
4098 7290 8.682710 ACAAAGTAGCAAGTTGAAACATCTTAA 58.317 29.630 7.16 0.00 0.00 1.85
4099 7291 9.683069 CAAAGTAGCAAGTTGAAACATCTTAAT 57.317 29.630 7.16 0.00 0.00 1.40
4102 7294 8.656849 AGTAGCAAGTTGAAACATCTTAATACG 58.343 33.333 7.16 0.00 0.00 3.06
4103 7295 7.667043 AGCAAGTTGAAACATCTTAATACGA 57.333 32.000 7.16 0.00 0.00 3.43
4104 7296 7.743104 AGCAAGTTGAAACATCTTAATACGAG 58.257 34.615 7.16 0.00 0.00 4.18
4105 7297 7.387948 AGCAAGTTGAAACATCTTAATACGAGT 59.612 33.333 7.16 0.00 0.00 4.18
4106 7298 7.688578 GCAAGTTGAAACATCTTAATACGAGTC 59.311 37.037 7.16 0.00 0.00 3.36
4107 7299 7.829378 AGTTGAAACATCTTAATACGAGTCC 57.171 36.000 0.00 0.00 0.00 3.85
4108 7300 7.612677 AGTTGAAACATCTTAATACGAGTCCT 58.387 34.615 0.00 0.00 0.00 3.85
4109 7301 7.760340 AGTTGAAACATCTTAATACGAGTCCTC 59.240 37.037 0.00 0.00 0.00 3.71
4110 7302 6.570692 TGAAACATCTTAATACGAGTCCTCC 58.429 40.000 0.00 0.00 0.00 4.30
4111 7303 6.153851 TGAAACATCTTAATACGAGTCCTCCA 59.846 38.462 0.00 0.00 0.00 3.86
4112 7304 5.776173 ACATCTTAATACGAGTCCTCCAG 57.224 43.478 0.00 0.00 0.00 3.86
4113 7305 5.446860 ACATCTTAATACGAGTCCTCCAGA 58.553 41.667 0.00 0.00 0.00 3.86
4114 7306 5.533154 ACATCTTAATACGAGTCCTCCAGAG 59.467 44.000 0.00 0.00 0.00 3.35
4115 7307 5.369409 TCTTAATACGAGTCCTCCAGAGA 57.631 43.478 0.00 0.00 0.00 3.10
4116 7308 5.942961 TCTTAATACGAGTCCTCCAGAGAT 58.057 41.667 0.00 0.00 0.00 2.75
4117 7309 6.366340 TCTTAATACGAGTCCTCCAGAGATT 58.634 40.000 0.00 0.00 0.00 2.40
4118 7310 7.515586 TCTTAATACGAGTCCTCCAGAGATTA 58.484 38.462 0.00 0.00 0.00 1.75
4119 7311 7.662258 TCTTAATACGAGTCCTCCAGAGATTAG 59.338 40.741 0.00 0.00 0.00 1.73
4120 7312 2.303175 ACGAGTCCTCCAGAGATTAGC 58.697 52.381 0.00 0.00 0.00 3.09
4121 7313 2.302260 CGAGTCCTCCAGAGATTAGCA 58.698 52.381 0.00 0.00 0.00 3.49
4122 7314 2.890311 CGAGTCCTCCAGAGATTAGCAT 59.110 50.000 0.00 0.00 0.00 3.79
4123 7315 3.320541 CGAGTCCTCCAGAGATTAGCATT 59.679 47.826 0.00 0.00 0.00 3.56
4124 7316 4.520874 CGAGTCCTCCAGAGATTAGCATTA 59.479 45.833 0.00 0.00 0.00 1.90
4125 7317 5.184864 CGAGTCCTCCAGAGATTAGCATTAT 59.815 44.000 0.00 0.00 0.00 1.28
4126 7318 6.375736 CGAGTCCTCCAGAGATTAGCATTATA 59.624 42.308 0.00 0.00 0.00 0.98
4127 7319 7.475137 AGTCCTCCAGAGATTAGCATTATAC 57.525 40.000 0.00 0.00 0.00 1.47
4128 7320 7.245292 AGTCCTCCAGAGATTAGCATTATACT 58.755 38.462 0.00 0.00 0.00 2.12
4129 7321 7.396055 AGTCCTCCAGAGATTAGCATTATACTC 59.604 40.741 0.00 0.00 0.00 2.59
4130 7322 6.665680 TCCTCCAGAGATTAGCATTATACTCC 59.334 42.308 0.00 0.00 0.00 3.85
4131 7323 6.127196 CCTCCAGAGATTAGCATTATACTCCC 60.127 46.154 0.00 0.00 0.00 4.30
4132 7324 6.565974 TCCAGAGATTAGCATTATACTCCCT 58.434 40.000 0.00 0.00 0.00 4.20
4133 7325 7.019388 TCCAGAGATTAGCATTATACTCCCTT 58.981 38.462 0.00 0.00 0.00 3.95
4134 7326 7.179338 TCCAGAGATTAGCATTATACTCCCTTC 59.821 40.741 0.00 0.00 0.00 3.46
4135 7327 7.180051 CCAGAGATTAGCATTATACTCCCTTCT 59.820 40.741 0.00 0.00 0.00 2.85
4136 7328 9.249053 CAGAGATTAGCATTATACTCCCTTCTA 57.751 37.037 0.00 0.00 0.00 2.10
4139 7331 9.207868 AGATTAGCATTATACTCCCTTCTATCC 57.792 37.037 0.00 0.00 0.00 2.59
4140 7332 7.735326 TTAGCATTATACTCCCTTCTATCCC 57.265 40.000 0.00 0.00 0.00 3.85
4141 7333 5.665701 AGCATTATACTCCCTTCTATCCCA 58.334 41.667 0.00 0.00 0.00 4.37
4142 7334 6.275461 AGCATTATACTCCCTTCTATCCCAT 58.725 40.000 0.00 0.00 0.00 4.00
4143 7335 6.385467 AGCATTATACTCCCTTCTATCCCATC 59.615 42.308 0.00 0.00 0.00 3.51
4184 7376 7.180051 CCAGAGATTAGCATTATACTCCCTTCT 59.820 40.741 0.00 0.00 0.00 2.85
4188 7380 8.908903 AGATTAGCATTATACTCCCTTCTATCG 58.091 37.037 0.00 0.00 0.00 2.92
4230 7476 9.952188 GTTTTGAAATTAGCATTATACTCCCTC 57.048 33.333 0.00 0.00 0.00 4.30
4244 7490 4.152284 ACTCCCTCCGATCCAAAATAAC 57.848 45.455 0.00 0.00 0.00 1.89
4251 7497 2.675844 CCGATCCAAAATAACTGTCGCA 59.324 45.455 0.00 0.00 0.00 5.10
4252 7498 3.242413 CCGATCCAAAATAACTGTCGCAG 60.242 47.826 5.47 5.47 37.52 5.18
4265 7511 5.751243 ACTGTCGCAGTTTTGAACTAAAT 57.249 34.783 6.67 0.00 42.59 1.40
4266 7512 6.854496 ACTGTCGCAGTTTTGAACTAAATA 57.146 33.333 6.67 0.00 42.59 1.40
4267 7513 7.254227 ACTGTCGCAGTTTTGAACTAAATAA 57.746 32.000 6.67 0.00 42.59 1.40
4268 7514 7.352739 ACTGTCGCAGTTTTGAACTAAATAAG 58.647 34.615 6.67 0.00 42.59 1.73
4269 7515 7.012044 ACTGTCGCAGTTTTGAACTAAATAAGT 59.988 33.333 6.67 0.00 42.59 2.24
4270 7516 7.129622 TGTCGCAGTTTTGAACTAAATAAGTG 58.870 34.615 0.00 0.00 40.46 3.16
4271 7517 7.130269 GTCGCAGTTTTGAACTAAATAAGTGT 58.870 34.615 0.00 0.00 40.46 3.55
4272 7518 7.320560 GTCGCAGTTTTGAACTAAATAAGTGTC 59.679 37.037 0.00 0.00 40.46 3.67
4273 7519 6.299966 CGCAGTTTTGAACTAAATAAGTGTCG 59.700 38.462 0.00 0.00 40.46 4.35
4274 7520 6.086371 GCAGTTTTGAACTAAATAAGTGTCGC 59.914 38.462 0.00 0.00 40.46 5.19
4275 7521 7.129622 CAGTTTTGAACTAAATAAGTGTCGCA 58.870 34.615 0.00 0.00 40.46 5.10
4292 7538 4.201871 TGTCGCAGTTTTGAACTAAGGTTG 60.202 41.667 0.00 0.00 40.46 3.77
4293 7539 4.034742 GTCGCAGTTTTGAACTAAGGTTGA 59.965 41.667 0.00 0.00 40.46 3.18
4294 7540 4.636648 TCGCAGTTTTGAACTAAGGTTGAA 59.363 37.500 0.00 0.00 40.46 2.69
4295 7541 4.733405 CGCAGTTTTGAACTAAGGTTGAAC 59.267 41.667 0.00 0.00 40.46 3.18
4296 7542 5.448632 CGCAGTTTTGAACTAAGGTTGAACT 60.449 40.000 0.00 0.00 40.46 3.01
4316 7562 5.668558 ACTAACCTTAGTTCAAAACTGCG 57.331 39.130 2.65 0.00 40.96 5.18
4340 7644 4.130118 CACTTATTTTGGATCGGAGGGAG 58.870 47.826 0.00 0.00 0.00 4.30
4559 7870 6.169094 TCTGTCTTTCTAAATCTTGCCTCTG 58.831 40.000 0.00 0.00 0.00 3.35
4675 7986 0.107654 GTCTAAGCCCGCATCCAAGT 60.108 55.000 0.00 0.00 0.00 3.16
4856 8167 3.777478 CTTTCATGATGGTGTTGGCATC 58.223 45.455 0.00 0.00 0.00 3.91
5034 8354 1.448540 CGAGTTGCTGTGGGCTAGG 60.449 63.158 0.00 0.00 42.39 3.02
5143 8466 0.028505 CATTGCCGTAGTGCTGCATC 59.971 55.000 5.27 0.00 37.18 3.91
5211 8534 2.777459 ACCTAGGAATCGAGACCCAT 57.223 50.000 17.98 0.00 0.00 4.00
5219 8542 3.877508 GGAATCGAGACCCATTTTACCTG 59.122 47.826 0.00 0.00 0.00 4.00
5276 8599 3.117131 AGTCTTCATCAACCCCCAACTTT 60.117 43.478 0.00 0.00 0.00 2.66
5310 8633 1.675801 CAACTGCCCTCTCTGCTCA 59.324 57.895 0.00 0.00 0.00 4.26
5333 8656 1.130054 TCCTGCAGCAGTTCCTTCCT 61.130 55.000 21.26 0.00 0.00 3.36
5334 8657 0.251077 CCTGCAGCAGTTCCTTCCTT 60.251 55.000 21.26 0.00 0.00 3.36
5335 8658 1.163554 CTGCAGCAGTTCCTTCCTTC 58.836 55.000 14.90 0.00 0.00 3.46
5336 8659 0.250901 TGCAGCAGTTCCTTCCTTCC 60.251 55.000 0.00 0.00 0.00 3.46
5360 8683 4.966466 TGTTGCTGGTGCTACACAGCTT 62.966 50.000 16.35 0.00 46.51 3.74
5372 8695 1.203187 ACACAGCTTCTCCTAGGACCA 60.203 52.381 7.62 0.00 0.00 4.02
5404 8727 1.615424 GTTAGGGGCAGGGTCTCCA 60.615 63.158 0.00 0.00 34.83 3.86
5417 8740 3.631453 TCTCCAAAGACTTGCGCAT 57.369 47.368 12.75 0.00 0.00 4.73
5423 8746 1.741706 CAAAGACTTGCGCATGAGGAT 59.258 47.619 27.85 7.05 0.00 3.24
5428 8751 1.141657 ACTTGCGCATGAGGATATGGT 59.858 47.619 27.85 1.01 0.00 3.55
5431 8754 1.580845 GCGCATGAGGATATGGTGGC 61.581 60.000 0.30 0.00 0.00 5.01
5444 8767 0.464735 TGGTGGCGGTGTATTATGGC 60.465 55.000 0.00 0.00 0.00 4.40
5452 8775 2.682563 CGGTGTATTATGGCAAGGTGGT 60.683 50.000 0.00 0.00 0.00 4.16
5458 8781 0.107214 TATGGCAAGGTGGTAGCAGC 60.107 55.000 16.07 16.07 0.00 5.25
5505 8831 1.412226 CATCGGCATAATCGCGTCG 59.588 57.895 5.77 0.51 0.00 5.12
5507 8833 4.059459 CGGCATAATCGCGTCGGC 62.059 66.667 5.77 4.18 0.00 5.54
5508 8834 2.964925 GGCATAATCGCGTCGGCA 60.965 61.111 5.77 0.00 39.92 5.69
5509 8835 2.317609 GGCATAATCGCGTCGGCAT 61.318 57.895 5.77 0.00 39.92 4.40
5511 8837 0.093026 GCATAATCGCGTCGGCATAC 59.907 55.000 5.77 0.00 39.92 2.39
5512 8838 1.698165 CATAATCGCGTCGGCATACT 58.302 50.000 5.77 0.00 39.92 2.12
5513 8839 1.386748 CATAATCGCGTCGGCATACTG 59.613 52.381 5.77 0.00 39.92 2.74
5515 8841 1.145759 AATCGCGTCGGCATACTGTG 61.146 55.000 5.77 0.00 39.92 3.66
5517 8843 1.588932 CGCGTCGGCATACTGTGAT 60.589 57.895 0.00 0.00 39.92 3.06
5518 8844 1.145759 CGCGTCGGCATACTGTGATT 61.146 55.000 0.00 0.00 39.92 2.57
5519 8845 1.847818 GCGTCGGCATACTGTGATTA 58.152 50.000 0.00 0.00 39.62 1.75
5521 8847 2.543031 GCGTCGGCATACTGTGATTAGA 60.543 50.000 0.00 0.00 39.62 2.10
5523 8849 4.299155 CGTCGGCATACTGTGATTAGAAT 58.701 43.478 0.00 0.00 0.00 2.40
5524 8850 4.148871 CGTCGGCATACTGTGATTAGAATG 59.851 45.833 0.00 0.00 0.00 2.67
5525 8851 5.050490 GTCGGCATACTGTGATTAGAATGT 58.950 41.667 0.00 0.00 0.00 2.71
5526 8852 6.213677 GTCGGCATACTGTGATTAGAATGTA 58.786 40.000 0.00 0.00 0.00 2.29
5531 10242 6.239600 GCATACTGTGATTAGAATGTAGGGGA 60.240 42.308 0.00 0.00 0.00 4.81
5532 10243 7.689313 GCATACTGTGATTAGAATGTAGGGGAA 60.689 40.741 0.00 0.00 0.00 3.97
5546 10257 2.046217 GGAAAGGGTGTCGAGGGC 60.046 66.667 0.00 0.00 0.00 5.19
5560 10272 2.031768 GGGCGGAGATGAGGATGC 59.968 66.667 0.00 0.00 0.00 3.91
5561 10273 2.811514 GGGCGGAGATGAGGATGCA 61.812 63.158 0.00 0.00 0.00 3.96
5575 10287 2.830923 AGGATGCAGGAGAGAATATCCG 59.169 50.000 0.00 0.00 42.02 4.18
5586 10298 6.043706 AGGAGAGAATATCCGTTGGAAATCAT 59.956 38.462 0.00 0.00 42.02 2.45
5610 10322 9.950680 CATCAAGTTACAGTGAAAACTATGTTT 57.049 29.630 13.50 0.00 34.91 2.83
5620 10332 8.523464 CAGTGAAAACTATGTTTTGAAGTTTCG 58.477 33.333 12.32 0.00 41.36 3.46
5644 10366 7.274904 TCGAAAAAGTACGATATGTTCAGGAAG 59.725 37.037 0.00 0.00 33.62 3.46
5772 10494 5.876651 AATTTGGCCTCTTTGAAGTTCTT 57.123 34.783 3.32 0.00 0.00 2.52
5807 10529 8.689251 TGTTTTCATCAGATACTTCTCTTACG 57.311 34.615 0.00 0.00 0.00 3.18
5888 10610 3.149436 TGTTGTTTCTTGTGCTCTTGC 57.851 42.857 0.00 0.00 40.20 4.01
5896 10618 0.390340 TTGTGCTCTTGCTCCTAGCG 60.390 55.000 0.00 0.00 46.26 4.26
5897 10619 1.250840 TGTGCTCTTGCTCCTAGCGA 61.251 55.000 0.00 0.00 46.26 4.93
5899 10621 0.108615 TGCTCTTGCTCCTAGCGAAC 60.109 55.000 0.00 0.00 46.26 3.95
5921 10644 6.851222 ACAACAGTTTGTCATCTTACTCTG 57.149 37.500 0.00 0.00 42.67 3.35
5940 10663 1.072806 TGCTGGCTGCTATTGGGATAG 59.927 52.381 17.45 0.00 43.37 2.08
5941 10664 1.612726 GCTGGCTGCTATTGGGATAGG 60.613 57.143 9.31 0.00 36.54 2.57
5942 10665 1.004044 CTGGCTGCTATTGGGATAGGG 59.996 57.143 0.00 0.00 36.54 3.53
5943 10666 0.322906 GGCTGCTATTGGGATAGGGC 60.323 60.000 0.00 0.00 36.54 5.19
5944 10667 0.322906 GCTGCTATTGGGATAGGGCC 60.323 60.000 0.00 0.00 36.54 5.80
5945 10668 0.036010 CTGCTATTGGGATAGGGCCG 60.036 60.000 0.00 0.00 36.54 6.13
5946 10669 1.377333 GCTATTGGGATAGGGCCGC 60.377 63.158 0.00 0.00 36.54 6.53
5947 10670 1.079127 CTATTGGGATAGGGCCGCG 60.079 63.158 0.00 0.00 33.11 6.46
5948 10671 3.248446 TATTGGGATAGGGCCGCGC 62.248 63.158 0.00 0.00 0.00 6.86
5950 10673 4.926162 TGGGATAGGGCCGCGCTA 62.926 66.667 18.46 18.46 33.62 4.26
5951 10674 4.374645 GGGATAGGGCCGCGCTAC 62.375 72.222 18.52 12.32 31.96 3.58
5952 10675 4.719369 GGATAGGGCCGCGCTACG 62.719 72.222 18.52 0.00 43.15 3.51
5971 10694 2.026301 GGAAGATCCGTCGCCTCG 59.974 66.667 0.00 0.00 0.00 4.63
5987 10710 4.902308 CGGCAACCGTCAGATGTA 57.098 55.556 0.00 0.00 42.73 2.29
5988 10711 3.362581 CGGCAACCGTCAGATGTAT 57.637 52.632 0.00 0.00 42.73 2.29
5989 10712 2.502213 CGGCAACCGTCAGATGTATA 57.498 50.000 0.00 0.00 42.73 1.47
5990 10713 2.394708 CGGCAACCGTCAGATGTATAG 58.605 52.381 0.00 0.00 42.73 1.31
5991 10714 2.223735 CGGCAACCGTCAGATGTATAGT 60.224 50.000 0.00 0.00 42.73 2.12
5992 10715 3.737047 CGGCAACCGTCAGATGTATAGTT 60.737 47.826 0.00 0.00 42.73 2.24
5993 10716 4.498513 CGGCAACCGTCAGATGTATAGTTA 60.499 45.833 0.00 0.00 42.73 2.24
5994 10717 5.539048 GGCAACCGTCAGATGTATAGTTAT 58.461 41.667 0.00 0.00 0.00 1.89
5995 10718 5.634020 GGCAACCGTCAGATGTATAGTTATC 59.366 44.000 0.00 0.00 0.00 1.75
5996 10719 5.634020 GCAACCGTCAGATGTATAGTTATCC 59.366 44.000 0.00 0.00 0.00 2.59
5997 10720 6.737622 GCAACCGTCAGATGTATAGTTATCCA 60.738 42.308 0.00 0.00 0.00 3.41
5998 10721 6.576662 ACCGTCAGATGTATAGTTATCCAG 57.423 41.667 0.00 0.00 0.00 3.86
5999 10722 5.047943 ACCGTCAGATGTATAGTTATCCAGC 60.048 44.000 0.00 0.00 0.00 4.85
6000 10723 5.089411 CGTCAGATGTATAGTTATCCAGCG 58.911 45.833 0.00 0.00 0.00 5.18
6001 10724 5.334957 CGTCAGATGTATAGTTATCCAGCGT 60.335 44.000 0.00 0.00 0.00 5.07
6002 10725 6.448006 GTCAGATGTATAGTTATCCAGCGTT 58.552 40.000 0.00 0.00 0.00 4.84
6003 10726 6.583050 GTCAGATGTATAGTTATCCAGCGTTC 59.417 42.308 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 6.258068 GGTCATAACTAGTGACACATTTAGGC 59.742 42.308 8.59 1.44 45.99 3.93
17 18 2.766828 AGGGCAGGTCATAACTAGTGAC 59.233 50.000 0.00 0.00 44.01 3.67
28 29 1.452953 CGTATCGCTAGGGCAGGTCA 61.453 60.000 1.02 0.00 38.60 4.02
34 35 1.233019 TAGTGTCGTATCGCTAGGGC 58.767 55.000 1.02 0.00 0.00 5.19
69 70 4.081406 ACATACATGTTTCAGCACACCAT 58.919 39.130 2.30 0.00 37.90 3.55
78 79 8.535690 TGTGTAATAACGACATACATGTTTCA 57.464 30.769 2.30 0.00 41.95 2.69
148 149 1.682740 TGGGATAGTGTCGTATCGCA 58.317 50.000 6.55 6.55 45.26 5.10
166 167 1.432514 CACACCACGTCCTCAAGATG 58.567 55.000 0.00 0.00 37.53 2.90
171 172 1.681486 TTCAGCACACCACGTCCTCA 61.681 55.000 0.00 0.00 0.00 3.86
240 241 2.092968 CGGATGGTCAGATCTTTTGGGA 60.093 50.000 0.00 0.00 0.00 4.37
242 243 1.672881 GCGGATGGTCAGATCTTTTGG 59.327 52.381 0.00 0.00 0.00 3.28
243 244 1.672881 GGCGGATGGTCAGATCTTTTG 59.327 52.381 0.00 0.00 0.00 2.44
420 421 3.325201 GAATTCGGTGGCCCTCGGT 62.325 63.158 13.66 2.35 0.00 4.69
445 446 4.415881 TGTGGTGGTAATATAGCCAGTG 57.584 45.455 0.00 0.00 35.14 3.66
446 447 4.473559 AGTTGTGGTGGTAATATAGCCAGT 59.526 41.667 0.00 0.00 35.14 4.00
447 448 5.036117 AGTTGTGGTGGTAATATAGCCAG 57.964 43.478 0.00 0.00 35.14 4.85
465 466 4.317839 CGTCGAGTTACTGTTGGAAAGTTG 60.318 45.833 0.00 0.00 0.00 3.16
467 468 3.181483 ACGTCGAGTTACTGTTGGAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
493 494 3.737266 GTCGGTTCGTTGATAACTTGACA 59.263 43.478 0.00 0.00 34.87 3.58
525 526 5.755409 AGAGGGTGTGTAATGTGATTGTA 57.245 39.130 0.00 0.00 0.00 2.41
627 629 1.227674 CCCCGCTATGACTGGCTTC 60.228 63.158 0.00 0.00 0.00 3.86
629 631 2.041922 TCCCCGCTATGACTGGCT 60.042 61.111 0.00 0.00 0.00 4.75
642 644 1.931635 TGCAAAATTACCACCTCCCC 58.068 50.000 0.00 0.00 0.00 4.81
669 671 5.053145 CCATTATGTAGTGCTCCTCTGTTC 58.947 45.833 0.00 0.00 0.00 3.18
718 720 8.312564 TGAATTAATGTGCTCCATGATTTTGAA 58.687 29.630 0.00 0.00 32.82 2.69
719 721 7.760794 GTGAATTAATGTGCTCCATGATTTTGA 59.239 33.333 0.00 0.00 32.82 2.69
767 769 0.458669 GCAAGGGGCATGTCTTGATG 59.541 55.000 21.24 8.47 41.94 3.07
874 879 1.065418 CCTGCCCGGTCTTCTGTATTT 60.065 52.381 0.00 0.00 0.00 1.40
876 881 1.338136 CCCTGCCCGGTCTTCTGTAT 61.338 60.000 0.00 0.00 0.00 2.29
877 882 1.987855 CCCTGCCCGGTCTTCTGTA 60.988 63.158 0.00 0.00 0.00 2.74
878 883 3.322466 CCCTGCCCGGTCTTCTGT 61.322 66.667 0.00 0.00 0.00 3.41
879 884 4.785453 GCCCTGCCCGGTCTTCTG 62.785 72.222 0.00 0.00 0.00 3.02
881 886 3.645268 ATTGCCCTGCCCGGTCTTC 62.645 63.158 0.00 0.00 0.00 2.87
882 887 3.661648 ATTGCCCTGCCCGGTCTT 61.662 61.111 0.00 0.00 0.00 3.01
1186 1219 1.726853 CACCAATCGTGAGGGAAGAC 58.273 55.000 0.00 0.00 46.20 3.01
1188 1221 1.026718 GGCACCAATCGTGAGGGAAG 61.027 60.000 0.00 0.00 46.20 3.46
1248 1281 4.821589 GGGGAGAAGCAGGCGTCG 62.822 72.222 1.69 0.00 0.00 5.12
1382 1443 6.230472 AGAAGAAGAAGAAGAAGAAGAAGGC 58.770 40.000 0.00 0.00 0.00 4.35
1436 1962 3.591835 ACCCAGCAAAACGCACCG 61.592 61.111 0.00 0.00 46.13 4.94
1497 2702 2.106131 CGACGCCATCCAATCCGA 59.894 61.111 0.00 0.00 0.00 4.55
1528 2742 1.067142 CAACAGCTCCGCCAAGTAGTA 60.067 52.381 0.00 0.00 0.00 1.82
1537 2751 3.123620 CTCCTGCAACAGCTCCGC 61.124 66.667 0.00 0.00 0.00 5.54
1609 2824 2.659610 GAGGCTCTCACCGTTGCT 59.340 61.111 7.40 0.00 33.69 3.91
1695 2911 3.257561 CAATCAGGCGACGGCGAG 61.258 66.667 18.90 12.75 41.24 5.03
1741 2957 2.166821 AACAGAGTCAAGCAGAGCAG 57.833 50.000 0.00 0.00 0.00 4.24
1788 3004 1.880675 ACCTACGACACACACAGAGAG 59.119 52.381 0.00 0.00 0.00 3.20
1790 3006 1.880675 AGACCTACGACACACACAGAG 59.119 52.381 0.00 0.00 0.00 3.35
1792 3008 2.795175 AAGACCTACGACACACACAG 57.205 50.000 0.00 0.00 0.00 3.66
1971 3202 1.078848 CAGCCTCTCAAAGTCCCCG 60.079 63.158 0.00 0.00 0.00 5.73
2052 3283 1.080161 CGGGCCAAAACCATTTCCG 60.080 57.895 4.39 0.00 30.29 4.30
2114 3345 2.809665 GCCACCCTCATGTCATCATCTC 60.810 54.545 0.00 0.00 31.15 2.75
2115 3346 1.142465 GCCACCCTCATGTCATCATCT 59.858 52.381 0.00 0.00 31.15 2.90
2262 3496 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2263 3497 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2264 3498 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2265 3499 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2266 3500 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2267 3501 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2268 3502 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2269 3503 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2270 3504 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2271 3505 5.835113 ATTGGGTCATCTATTTTGGAACG 57.165 39.130 0.00 0.00 0.00 3.95
2272 3506 7.877612 ACAAAATTGGGTCATCTATTTTGGAAC 59.122 33.333 19.76 0.00 45.43 3.62
2273 3507 7.972301 ACAAAATTGGGTCATCTATTTTGGAA 58.028 30.769 19.76 0.00 45.43 3.53
2274 3508 7.552050 ACAAAATTGGGTCATCTATTTTGGA 57.448 32.000 19.76 0.00 45.43 3.53
2275 3509 8.531146 AGTACAAAATTGGGTCATCTATTTTGG 58.469 33.333 19.76 9.08 45.43 3.28
2312 3546 9.158233 CGTTCTAAAATAGATGACCCAACTTTA 57.842 33.333 0.00 0.00 34.22 1.85
2313 3547 7.120726 CCGTTCTAAAATAGATGACCCAACTTT 59.879 37.037 0.00 0.00 34.22 2.66
2314 3548 6.598064 CCGTTCTAAAATAGATGACCCAACTT 59.402 38.462 0.00 0.00 34.22 2.66
2315 3549 6.070424 TCCGTTCTAAAATAGATGACCCAACT 60.070 38.462 0.00 0.00 34.22 3.16
2316 3550 6.110707 TCCGTTCTAAAATAGATGACCCAAC 58.889 40.000 0.00 0.00 34.22 3.77
2317 3551 6.302535 TCCGTTCTAAAATAGATGACCCAA 57.697 37.500 0.00 0.00 34.22 4.12
2318 3552 5.163343 CCTCCGTTCTAAAATAGATGACCCA 60.163 44.000 0.00 0.00 34.22 4.51
2319 3553 5.070047 TCCTCCGTTCTAAAATAGATGACCC 59.930 44.000 0.00 0.00 34.22 4.46
2320 3554 6.158023 TCCTCCGTTCTAAAATAGATGACC 57.842 41.667 0.00 0.00 34.22 4.02
2321 3555 7.266400 ACTTCCTCCGTTCTAAAATAGATGAC 58.734 38.462 0.00 0.00 34.22 3.06
2322 3556 7.419711 ACTTCCTCCGTTCTAAAATAGATGA 57.580 36.000 0.00 0.00 34.22 2.92
2323 3557 8.414778 AGTACTTCCTCCGTTCTAAAATAGATG 58.585 37.037 0.00 0.00 34.22 2.90
2324 3558 8.536340 AGTACTTCCTCCGTTCTAAAATAGAT 57.464 34.615 0.00 0.00 34.22 1.98
2325 3559 7.951347 AGTACTTCCTCCGTTCTAAAATAGA 57.049 36.000 0.00 0.00 0.00 1.98
2326 3560 8.033626 ACAAGTACTTCCTCCGTTCTAAAATAG 58.966 37.037 4.77 0.00 0.00 1.73
2327 3561 7.816031 CACAAGTACTTCCTCCGTTCTAAAATA 59.184 37.037 4.77 0.00 0.00 1.40
2328 3562 6.649557 CACAAGTACTTCCTCCGTTCTAAAAT 59.350 38.462 4.77 0.00 0.00 1.82
2329 3563 5.987347 CACAAGTACTTCCTCCGTTCTAAAA 59.013 40.000 4.77 0.00 0.00 1.52
2330 3564 5.069516 ACACAAGTACTTCCTCCGTTCTAAA 59.930 40.000 4.77 0.00 0.00 1.85
2331 3565 4.586001 ACACAAGTACTTCCTCCGTTCTAA 59.414 41.667 4.77 0.00 0.00 2.10
2332 3566 4.147321 ACACAAGTACTTCCTCCGTTCTA 58.853 43.478 4.77 0.00 0.00 2.10
2333 3567 2.963782 ACACAAGTACTTCCTCCGTTCT 59.036 45.455 4.77 0.00 0.00 3.01
2334 3568 3.382048 ACACAAGTACTTCCTCCGTTC 57.618 47.619 4.77 0.00 0.00 3.95
2335 3569 4.525487 TGATACACAAGTACTTCCTCCGTT 59.475 41.667 4.77 0.00 31.96 4.44
2336 3570 4.084287 TGATACACAAGTACTTCCTCCGT 58.916 43.478 4.77 0.00 31.96 4.69
2337 3571 4.713824 TGATACACAAGTACTTCCTCCG 57.286 45.455 4.77 0.00 31.96 4.63
2338 3572 6.049790 GGAATGATACACAAGTACTTCCTCC 58.950 44.000 4.77 0.00 35.64 4.30
2339 3573 5.749109 CGGAATGATACACAAGTACTTCCTC 59.251 44.000 4.77 0.00 35.99 3.71
2340 3574 5.187186 ACGGAATGATACACAAGTACTTCCT 59.813 40.000 4.77 0.00 35.99 3.36
2341 3575 5.416947 ACGGAATGATACACAAGTACTTCC 58.583 41.667 4.77 0.00 35.42 3.46
2342 3576 6.963049 AACGGAATGATACACAAGTACTTC 57.037 37.500 4.77 0.00 31.96 3.01
2343 3577 8.715088 GTTAAACGGAATGATACACAAGTACTT 58.285 33.333 1.12 1.12 31.96 2.24
2344 3578 7.062605 CGTTAAACGGAATGATACACAAGTACT 59.937 37.037 0.00 0.00 38.08 2.73
2345 3579 7.062138 TCGTTAAACGGAATGATACACAAGTAC 59.938 37.037 0.00 0.00 42.81 2.73
2369 3603 5.004821 GCAACTTATCGCATCCATACTATCG 59.995 44.000 0.00 0.00 0.00 2.92
2479 3713 0.694771 AGCTCTGTCTCCATGGCAAA 59.305 50.000 6.96 0.00 0.00 3.68
2646 3881 3.690460 CATTTACAGCAGAGGGAAAGGT 58.310 45.455 0.00 0.00 0.00 3.50
2661 3896 4.582441 CCAATTTTCGGCAAGCATTTAC 57.418 40.909 0.00 0.00 0.00 2.01
2673 3908 3.999663 AGAGAGAGACTTGCCAATTTTCG 59.000 43.478 0.00 0.00 0.00 3.46
2690 3925 1.151668 CCTGGTGCGTTTGAAGAGAG 58.848 55.000 0.00 0.00 0.00 3.20
2697 3932 1.529226 TTATCCACCTGGTGCGTTTG 58.471 50.000 21.47 7.48 36.34 2.93
2780 5909 1.810151 GGCCACTGCGTTAATGAGAAA 59.190 47.619 0.00 0.00 38.85 2.52
2890 6019 7.833786 AGCAATCAATAAAGAAATCAGCTTCA 58.166 30.769 0.00 0.00 0.00 3.02
2891 6020 7.434602 GGAGCAATCAATAAAGAAATCAGCTTC 59.565 37.037 0.00 0.00 0.00 3.86
3443 6613 7.708752 AGCAGAGTAAGCAGAGTAAATAATGAC 59.291 37.037 0.00 0.00 0.00 3.06
3462 6641 4.960938 TGAACAAGTATGACAAGCAGAGT 58.039 39.130 0.00 0.00 0.00 3.24
3464 6643 4.960938 ACTGAACAAGTATGACAAGCAGA 58.039 39.130 0.00 0.00 37.36 4.26
3465 6644 5.237127 TGAACTGAACAAGTATGACAAGCAG 59.763 40.000 0.00 0.00 38.56 4.24
3466 6645 5.122519 TGAACTGAACAAGTATGACAAGCA 58.877 37.500 0.00 0.00 38.56 3.91
3467 6646 5.673337 TGAACTGAACAAGTATGACAAGC 57.327 39.130 0.00 0.00 38.56 4.01
3468 6647 9.520204 AAAATTGAACTGAACAAGTATGACAAG 57.480 29.630 0.00 0.00 38.56 3.16
3719 6898 6.294176 CCAAAATAAGTGACTCAACCAGGAAG 60.294 42.308 0.00 0.00 0.00 3.46
3720 6899 5.534654 CCAAAATAAGTGACTCAACCAGGAA 59.465 40.000 0.00 0.00 0.00 3.36
3721 6900 5.070001 CCAAAATAAGTGACTCAACCAGGA 58.930 41.667 0.00 0.00 0.00 3.86
3722 6901 4.218417 CCCAAAATAAGTGACTCAACCAGG 59.782 45.833 0.00 0.00 0.00 4.45
3723 6902 5.048713 GTCCCAAAATAAGTGACTCAACCAG 60.049 44.000 0.00 0.00 0.00 4.00
3724 6903 4.825085 GTCCCAAAATAAGTGACTCAACCA 59.175 41.667 0.00 0.00 0.00 3.67
3725 6904 4.083484 CGTCCCAAAATAAGTGACTCAACC 60.083 45.833 0.00 0.00 0.00 3.77
3726 6905 4.083484 CCGTCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
3727 6906 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3728 6907 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
3729 6908 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3730 6909 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3731 6910 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3732 6911 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3733 6912 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3734 6913 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3735 6914 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3736 6915 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3737 6916 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3738 6917 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3739 6918 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
3740 6919 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3741 6920 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
3742 6921 1.835531 GAAAATACTCCCTCCGTCCCA 59.164 52.381 0.00 0.00 0.00 4.37
3743 6922 1.202498 CGAAAATACTCCCTCCGTCCC 60.202 57.143 0.00 0.00 0.00 4.46
3744 6923 1.479730 ACGAAAATACTCCCTCCGTCC 59.520 52.381 0.00 0.00 0.00 4.79
3745 6924 2.955477 ACGAAAATACTCCCTCCGTC 57.045 50.000 0.00 0.00 0.00 4.79
3746 6925 3.359950 ACTACGAAAATACTCCCTCCGT 58.640 45.455 0.00 0.00 0.00 4.69
3747 6926 4.023365 CCTACTACGAAAATACTCCCTCCG 60.023 50.000 0.00 0.00 0.00 4.63
3748 6927 4.261952 GCCTACTACGAAAATACTCCCTCC 60.262 50.000 0.00 0.00 0.00 4.30
3749 6928 4.340381 TGCCTACTACGAAAATACTCCCTC 59.660 45.833 0.00 0.00 0.00 4.30
3750 6929 4.284178 TGCCTACTACGAAAATACTCCCT 58.716 43.478 0.00 0.00 0.00 4.20
3751 6930 4.660789 TGCCTACTACGAAAATACTCCC 57.339 45.455 0.00 0.00 0.00 4.30
3752 6931 5.658468 AGTTGCCTACTACGAAAATACTCC 58.342 41.667 0.00 0.00 34.56 3.85
3753 6932 6.455246 GCAAGTTGCCTACTACGAAAATACTC 60.455 42.308 17.36 0.00 37.42 2.59
3754 6933 5.350640 GCAAGTTGCCTACTACGAAAATACT 59.649 40.000 17.36 0.00 37.42 2.12
3755 6934 5.121142 TGCAAGTTGCCTACTACGAAAATAC 59.879 40.000 24.59 0.00 44.23 1.89
3798 6982 0.309922 CAGGCTTGCTGAACACACTG 59.690 55.000 0.00 0.00 0.00 3.66
4095 7287 6.207025 GCTAATCTCTGGAGGACTCGTATTAA 59.793 42.308 0.00 0.00 0.00 1.40
4096 7288 5.706369 GCTAATCTCTGGAGGACTCGTATTA 59.294 44.000 0.00 0.00 0.00 0.98
4097 7289 4.521256 GCTAATCTCTGGAGGACTCGTATT 59.479 45.833 0.00 0.00 0.00 1.89
4098 7290 4.076394 GCTAATCTCTGGAGGACTCGTAT 58.924 47.826 0.00 0.00 0.00 3.06
4099 7291 3.118000 TGCTAATCTCTGGAGGACTCGTA 60.118 47.826 0.00 0.00 0.00 3.43
4100 7292 2.303175 GCTAATCTCTGGAGGACTCGT 58.697 52.381 0.00 0.00 0.00 4.18
4101 7293 2.302260 TGCTAATCTCTGGAGGACTCG 58.698 52.381 0.00 0.00 0.00 4.18
4102 7294 4.953940 AATGCTAATCTCTGGAGGACTC 57.046 45.455 0.00 0.00 0.00 3.36
4103 7295 7.245292 AGTATAATGCTAATCTCTGGAGGACT 58.755 38.462 0.00 0.00 0.00 3.85
4104 7296 7.363443 GGAGTATAATGCTAATCTCTGGAGGAC 60.363 44.444 0.00 0.00 0.00 3.85
4105 7297 6.665680 GGAGTATAATGCTAATCTCTGGAGGA 59.334 42.308 0.00 0.00 0.00 3.71
4106 7298 6.127196 GGGAGTATAATGCTAATCTCTGGAGG 60.127 46.154 0.00 0.00 0.00 4.30
4107 7299 6.667414 AGGGAGTATAATGCTAATCTCTGGAG 59.333 42.308 0.00 0.00 25.97 3.86
4108 7300 6.565974 AGGGAGTATAATGCTAATCTCTGGA 58.434 40.000 0.00 0.00 25.97 3.86
4109 7301 6.865834 AGGGAGTATAATGCTAATCTCTGG 57.134 41.667 0.00 0.00 25.97 3.86
4110 7302 8.133024 AGAAGGGAGTATAATGCTAATCTCTG 57.867 38.462 0.00 0.00 27.58 3.35
4113 7305 9.207868 GGATAGAAGGGAGTATAATGCTAATCT 57.792 37.037 0.00 0.00 0.00 2.40
4114 7306 8.425703 GGGATAGAAGGGAGTATAATGCTAATC 58.574 40.741 0.00 0.00 0.00 1.75
4115 7307 7.906736 TGGGATAGAAGGGAGTATAATGCTAAT 59.093 37.037 0.00 0.00 0.00 1.73
4116 7308 7.253421 TGGGATAGAAGGGAGTATAATGCTAA 58.747 38.462 0.00 0.00 0.00 3.09
4117 7309 6.811574 TGGGATAGAAGGGAGTATAATGCTA 58.188 40.000 0.00 0.00 0.00 3.49
4118 7310 5.665701 TGGGATAGAAGGGAGTATAATGCT 58.334 41.667 0.00 0.00 0.00 3.79
4119 7311 6.385467 AGATGGGATAGAAGGGAGTATAATGC 59.615 42.308 0.00 0.00 0.00 3.56
4120 7312 7.986553 AGATGGGATAGAAGGGAGTATAATG 57.013 40.000 0.00 0.00 0.00 1.90
4125 7317 9.494055 CATATTAAGATGGGATAGAAGGGAGTA 57.506 37.037 1.97 0.00 0.00 2.59
4126 7318 8.186985 TCATATTAAGATGGGATAGAAGGGAGT 58.813 37.037 10.08 0.00 0.00 3.85
4127 7319 8.615360 TCATATTAAGATGGGATAGAAGGGAG 57.385 38.462 10.08 0.00 0.00 4.30
4128 7320 8.186985 ACTCATATTAAGATGGGATAGAAGGGA 58.813 37.037 16.72 0.00 31.25 4.20
4129 7321 8.386012 ACTCATATTAAGATGGGATAGAAGGG 57.614 38.462 16.72 0.00 31.25 3.95
4130 7322 8.482128 GGACTCATATTAAGATGGGATAGAAGG 58.518 40.741 16.72 0.00 31.25 3.46
4131 7323 9.265862 AGGACTCATATTAAGATGGGATAGAAG 57.734 37.037 16.72 4.35 31.25 2.85
4132 7324 9.261035 GAGGACTCATATTAAGATGGGATAGAA 57.739 37.037 16.72 0.00 31.25 2.10
4133 7325 7.841729 GGAGGACTCATATTAAGATGGGATAGA 59.158 40.741 16.72 0.00 31.25 1.98
4134 7326 7.621285 TGGAGGACTCATATTAAGATGGGATAG 59.379 40.741 16.72 6.03 31.25 2.08
4135 7327 7.487338 TGGAGGACTCATATTAAGATGGGATA 58.513 38.462 16.72 0.00 31.25 2.59
4136 7328 6.334296 TGGAGGACTCATATTAAGATGGGAT 58.666 40.000 16.72 2.27 31.25 3.85
4137 7329 5.726560 TGGAGGACTCATATTAAGATGGGA 58.273 41.667 16.72 0.00 31.25 4.37
4138 7330 5.782331 TCTGGAGGACTCATATTAAGATGGG 59.218 44.000 8.43 8.43 33.15 4.00
4139 7331 6.723515 TCTCTGGAGGACTCATATTAAGATGG 59.276 42.308 10.08 4.05 0.00 3.51
4140 7332 7.773489 TCTCTGGAGGACTCATATTAAGATG 57.227 40.000 3.60 3.60 0.00 2.90
4141 7333 8.971032 AATCTCTGGAGGACTCATATTAAGAT 57.029 34.615 1.32 0.00 0.00 2.40
4142 7334 9.527157 CTAATCTCTGGAGGACTCATATTAAGA 57.473 37.037 1.32 0.00 0.00 2.10
4143 7335 8.250332 GCTAATCTCTGGAGGACTCATATTAAG 58.750 40.741 1.32 0.00 0.00 1.85
4184 7376 3.772932 ACCGCGACACTTATTTTCGATA 58.227 40.909 8.23 0.00 34.62 2.92
4188 7380 4.529446 TCAAAACCGCGACACTTATTTTC 58.471 39.130 8.23 0.00 0.00 2.29
4230 7476 2.675844 TGCGACAGTTATTTTGGATCGG 59.324 45.455 0.00 0.00 0.00 4.18
4244 7490 7.321271 CACTTATTTAGTTCAAAACTGCGACAG 59.679 37.037 2.65 5.47 42.84 3.51
4251 7497 7.012044 ACTGCGACACTTATTTAGTTCAAAACT 59.988 33.333 0.00 0.00 45.40 2.66
4252 7498 7.130269 ACTGCGACACTTATTTAGTTCAAAAC 58.870 34.615 0.00 0.00 33.85 2.43
4253 7499 7.254227 ACTGCGACACTTATTTAGTTCAAAA 57.746 32.000 0.00 0.00 33.85 2.44
4254 7500 6.854496 ACTGCGACACTTATTTAGTTCAAA 57.146 33.333 0.00 0.00 33.85 2.69
4255 7501 6.854496 AACTGCGACACTTATTTAGTTCAA 57.146 33.333 0.00 0.00 33.85 2.69
4256 7502 6.854496 AAACTGCGACACTTATTTAGTTCA 57.146 33.333 0.00 0.00 33.85 3.18
4257 7503 7.349711 TCAAAACTGCGACACTTATTTAGTTC 58.650 34.615 0.00 0.00 33.85 3.01
4258 7504 7.254227 TCAAAACTGCGACACTTATTTAGTT 57.746 32.000 0.00 0.00 33.85 2.24
4259 7505 6.854496 TCAAAACTGCGACACTTATTTAGT 57.146 33.333 0.00 0.00 37.68 2.24
4260 7506 7.352739 AGTTCAAAACTGCGACACTTATTTAG 58.647 34.615 0.00 0.00 41.01 1.85
4261 7507 7.254227 AGTTCAAAACTGCGACACTTATTTA 57.746 32.000 0.00 0.00 41.01 1.40
4262 7508 6.131544 AGTTCAAAACTGCGACACTTATTT 57.868 33.333 0.00 0.00 41.01 1.40
4263 7509 5.751243 AGTTCAAAACTGCGACACTTATT 57.249 34.783 0.00 0.00 41.01 1.40
4264 7510 6.073222 CCTTAGTTCAAAACTGCGACACTTAT 60.073 38.462 2.65 0.00 42.84 1.73
4265 7511 5.235616 CCTTAGTTCAAAACTGCGACACTTA 59.764 40.000 2.65 0.00 42.84 2.24
4266 7512 4.035208 CCTTAGTTCAAAACTGCGACACTT 59.965 41.667 2.65 0.00 42.84 3.16
4267 7513 3.560068 CCTTAGTTCAAAACTGCGACACT 59.440 43.478 2.65 0.00 42.84 3.55
4268 7514 3.311596 ACCTTAGTTCAAAACTGCGACAC 59.688 43.478 2.65 0.00 42.84 3.67
4269 7515 3.537580 ACCTTAGTTCAAAACTGCGACA 58.462 40.909 2.65 0.00 42.84 4.35
4270 7516 4.034742 TCAACCTTAGTTCAAAACTGCGAC 59.965 41.667 2.65 0.00 42.84 5.19
4271 7517 4.193090 TCAACCTTAGTTCAAAACTGCGA 58.807 39.130 2.65 0.00 42.84 5.10
4272 7518 4.545823 TCAACCTTAGTTCAAAACTGCG 57.454 40.909 2.65 0.00 42.84 5.18
4273 7519 5.891451 AGTTCAACCTTAGTTCAAAACTGC 58.109 37.500 2.65 0.00 42.84 4.40
4274 7520 8.836959 GTTAGTTCAACCTTAGTTCAAAACTG 57.163 34.615 2.65 0.00 42.84 3.16
4294 7540 5.235831 GTCGCAGTTTTGAACTAAGGTTAGT 59.764 40.000 0.00 0.00 45.43 2.24
4295 7541 5.235616 TGTCGCAGTTTTGAACTAAGGTTAG 59.764 40.000 0.00 0.00 40.46 2.34
4296 7542 5.006941 GTGTCGCAGTTTTGAACTAAGGTTA 59.993 40.000 0.00 0.00 40.46 2.85
4316 7562 3.877508 CCCTCCGATCCAAAATAAGTGTC 59.122 47.826 0.00 0.00 0.00 3.67
4340 7644 9.813080 GGAAATACAATCAAGCGAAGATAATAC 57.187 33.333 0.00 0.00 0.00 1.89
4856 8167 0.233848 GTAACACAGGTTTCGCACGG 59.766 55.000 0.00 0.00 38.45 4.94
4981 8301 5.999600 CAGTGCCATATCTGATGATTACCAA 59.000 40.000 0.00 0.00 34.32 3.67
5034 8354 2.357952 GTCGGATAAAAATCCCAGCACC 59.642 50.000 0.00 0.00 37.43 5.01
5211 8534 9.330063 CATAAGATAGTCATCAAGCAGGTAAAA 57.670 33.333 0.00 0.00 33.21 1.52
5219 8542 6.107901 ACCCTCATAAGATAGTCATCAAGC 57.892 41.667 0.00 0.00 33.21 4.01
5276 8599 5.497474 GGCAGTTGGGAGTTCTATTTTAGA 58.503 41.667 0.00 0.00 0.00 2.10
5310 8633 2.753029 GAACTGCTGCAGGAGGGT 59.247 61.111 34.65 23.82 37.85 4.34
5333 8656 2.390306 TAGCACCAGCAACAGCGGAA 62.390 55.000 0.00 0.00 45.49 4.30
5334 8657 2.878089 TAGCACCAGCAACAGCGGA 61.878 57.895 0.00 0.00 45.49 5.54
5335 8658 2.358615 TAGCACCAGCAACAGCGG 60.359 61.111 0.00 0.00 45.49 5.52
5336 8659 1.960763 TGTAGCACCAGCAACAGCG 60.961 57.895 0.00 0.00 45.49 5.18
5360 8683 0.932211 GTAGGGGTGGTCCTAGGAGA 59.068 60.000 13.15 0.00 39.82 3.71
5366 8689 2.191981 CCTAATGTAGGGGTGGTCCT 57.808 55.000 0.00 0.00 42.42 3.85
5404 8727 2.119801 ATCCTCATGCGCAAGTCTTT 57.880 45.000 17.11 0.00 41.68 2.52
5417 8740 0.980754 ACACCGCCACCATATCCTCA 60.981 55.000 0.00 0.00 0.00 3.86
5423 8746 2.551287 GCCATAATACACCGCCACCATA 60.551 50.000 0.00 0.00 0.00 2.74
5428 8751 1.674359 CTTGCCATAATACACCGCCA 58.326 50.000 0.00 0.00 0.00 5.69
5431 8754 1.946768 CCACCTTGCCATAATACACCG 59.053 52.381 0.00 0.00 0.00 4.94
5444 8767 2.042831 GGCAGCTGCTACCACCTTG 61.043 63.158 35.82 0.00 41.70 3.61
5452 8775 1.071228 CCATGTATCAGGCAGCTGCTA 59.929 52.381 35.82 22.54 41.70 3.49
5458 8781 1.135094 ACCTCCCATGTATCAGGCAG 58.865 55.000 0.00 0.00 0.00 4.85
5497 8823 1.588932 CACAGTATGCCGACGCGAT 60.589 57.895 15.93 0.00 42.53 4.58
5499 8825 1.145759 AATCACAGTATGCCGACGCG 61.146 55.000 3.53 3.53 42.53 6.01
5500 8826 1.787155 CTAATCACAGTATGCCGACGC 59.213 52.381 0.00 0.00 42.53 5.19
5501 8827 3.349488 TCTAATCACAGTATGCCGACG 57.651 47.619 0.00 0.00 42.53 5.12
5502 8828 5.050490 ACATTCTAATCACAGTATGCCGAC 58.950 41.667 0.00 0.00 42.53 4.79
5505 8831 5.934625 CCCTACATTCTAATCACAGTATGCC 59.065 44.000 0.00 0.00 42.53 4.40
5507 8833 7.303182 TCCCCTACATTCTAATCACAGTATG 57.697 40.000 0.00 0.00 46.00 2.39
5508 8834 7.931015 TTCCCCTACATTCTAATCACAGTAT 57.069 36.000 0.00 0.00 0.00 2.12
5509 8835 7.147549 CCTTTCCCCTACATTCTAATCACAGTA 60.148 40.741 0.00 0.00 0.00 2.74
5511 8837 6.058183 CCTTTCCCCTACATTCTAATCACAG 58.942 44.000 0.00 0.00 0.00 3.66
5512 8838 5.104109 CCCTTTCCCCTACATTCTAATCACA 60.104 44.000 0.00 0.00 0.00 3.58
5513 8839 5.104067 ACCCTTTCCCCTACATTCTAATCAC 60.104 44.000 0.00 0.00 0.00 3.06
5515 8841 5.104067 ACACCCTTTCCCCTACATTCTAATC 60.104 44.000 0.00 0.00 0.00 1.75
5517 8843 4.180723 ACACCCTTTCCCCTACATTCTAA 58.819 43.478 0.00 0.00 0.00 2.10
5518 8844 3.778629 GACACCCTTTCCCCTACATTCTA 59.221 47.826 0.00 0.00 0.00 2.10
5519 8845 2.576648 GACACCCTTTCCCCTACATTCT 59.423 50.000 0.00 0.00 0.00 2.40
5521 8847 1.280998 CGACACCCTTTCCCCTACATT 59.719 52.381 0.00 0.00 0.00 2.71
5523 8849 0.178926 TCGACACCCTTTCCCCTACA 60.179 55.000 0.00 0.00 0.00 2.74
5524 8850 0.535797 CTCGACACCCTTTCCCCTAC 59.464 60.000 0.00 0.00 0.00 3.18
5525 8851 0.616679 CCTCGACACCCTTTCCCCTA 60.617 60.000 0.00 0.00 0.00 3.53
5526 8852 1.918800 CCTCGACACCCTTTCCCCT 60.919 63.158 0.00 0.00 0.00 4.79
5531 10242 4.016706 CCGCCCTCGACACCCTTT 62.017 66.667 0.00 0.00 38.10 3.11
5546 10257 0.317799 CTCCTGCATCCTCATCTCCG 59.682 60.000 0.00 0.00 0.00 4.63
5560 10272 4.672587 TTCCAACGGATATTCTCTCCTG 57.327 45.455 0.00 0.00 0.00 3.86
5561 10273 5.366768 TGATTTCCAACGGATATTCTCTCCT 59.633 40.000 0.00 0.00 0.00 3.69
5575 10287 7.202016 TCACTGTAACTTGATGATTTCCAAC 57.798 36.000 0.00 0.00 0.00 3.77
5586 10298 9.781834 CAAAACATAGTTTTCACTGTAACTTGA 57.218 29.630 4.99 0.00 36.16 3.02
5610 10322 8.767085 ACATATCGTACTTTTTCGAAACTTCAA 58.233 29.630 10.79 1.14 39.45 2.69
5620 10332 8.169268 CACTTCCTGAACATATCGTACTTTTTC 58.831 37.037 0.00 0.00 0.00 2.29
5682 10404 6.370718 GGTGGTGTTCTATTAACGTCTGAATT 59.629 38.462 0.00 0.00 0.00 2.17
5690 10412 4.872124 GGTAAGGGTGGTGTTCTATTAACG 59.128 45.833 0.00 0.00 0.00 3.18
5702 10424 6.397217 AAAATACAGTATGGTAAGGGTGGT 57.603 37.500 0.00 0.00 43.62 4.16
5741 10463 6.413892 TCAAAGAGGCCAAATTTGAAAGTTT 58.586 32.000 19.86 9.14 39.34 2.66
5745 10467 5.988287 ACTTCAAAGAGGCCAAATTTGAAA 58.012 33.333 28.04 18.53 46.51 2.69
5752 10474 4.023291 ACAAGAACTTCAAAGAGGCCAAA 58.977 39.130 5.01 0.00 0.00 3.28
5757 10479 9.884465 CAAGTTATAACAAGAACTTCAAAGAGG 57.116 33.333 17.65 0.00 42.57 3.69
5797 10519 1.324736 GCATCGTTGCCGTAAGAGAAG 59.675 52.381 7.24 0.00 43.38 2.85
5820 10542 7.408756 TTCTATCTGGAAAATCACCCATTTG 57.591 36.000 0.00 0.00 34.69 2.32
5838 10560 9.372369 CCCCAGAAATCGTATTTCTATTCTATC 57.628 37.037 16.99 0.00 36.69 2.08
5888 10610 3.131396 ACAAACTGTTGTTCGCTAGGAG 58.869 45.455 0.00 0.00 46.01 3.69
5899 10621 5.468072 AGCAGAGTAAGATGACAAACTGTTG 59.532 40.000 0.00 0.00 40.84 3.33
5921 10644 1.612726 CCTATCCCAATAGCAGCCAGC 60.613 57.143 0.00 0.00 46.19 4.85
5954 10677 2.026301 CGAGGCGACGGATCTTCC 59.974 66.667 0.00 0.00 0.00 3.46
5971 10694 3.454371 ACTATACATCTGACGGTTGCC 57.546 47.619 0.00 0.00 0.00 4.52
5972 10695 5.634020 GGATAACTATACATCTGACGGTTGC 59.366 44.000 0.00 0.00 0.00 4.17
5973 10696 6.745116 TGGATAACTATACATCTGACGGTTG 58.255 40.000 0.00 0.00 0.00 3.77
5974 10697 6.516860 GCTGGATAACTATACATCTGACGGTT 60.517 42.308 0.00 0.00 0.00 4.44
5975 10698 5.047943 GCTGGATAACTATACATCTGACGGT 60.048 44.000 0.00 0.00 0.00 4.83
5976 10699 5.403246 GCTGGATAACTATACATCTGACGG 58.597 45.833 0.00 0.00 0.00 4.79
5977 10700 5.089411 CGCTGGATAACTATACATCTGACG 58.911 45.833 0.00 0.00 0.00 4.35
5978 10701 6.015027 ACGCTGGATAACTATACATCTGAC 57.985 41.667 0.00 0.00 0.00 3.51
5979 10702 6.650427 AACGCTGGATAACTATACATCTGA 57.350 37.500 0.00 0.00 0.00 3.27
5980 10703 6.936222 GAACGCTGGATAACTATACATCTG 57.064 41.667 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.