Multiple sequence alignment - TraesCS1A01G299400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G299400 chr1A 100.000 4959 0 0 1 4959 494436454 494441412 0.000000e+00 9158.0
1 TraesCS1A01G299400 chr1D 92.629 1940 101 13 2335 4258 397068634 397070547 0.000000e+00 2752.0
2 TraesCS1A01G299400 chr1D 85.529 1465 88 45 1 1376 397066556 397067985 0.000000e+00 1417.0
3 TraesCS1A01G299400 chr1D 88.795 589 58 6 1370 1954 397068021 397068605 0.000000e+00 715.0
4 TraesCS1A01G299400 chr1D 86.131 685 67 16 4264 4925 397070595 397071274 0.000000e+00 713.0
5 TraesCS1A01G299400 chr1D 91.971 137 10 1 1998 2134 156133494 156133359 1.820000e-44 191.0
6 TraesCS1A01G299400 chr1B 90.243 1814 125 31 2230 4031 532162088 532163861 0.000000e+00 2322.0
7 TraesCS1A01G299400 chr1B 88.980 1098 64 27 607 1661 532160451 532161534 0.000000e+00 1304.0
8 TraesCS1A01G299400 chr1B 85.045 448 36 12 149 574 532159899 532160337 1.280000e-115 427.0
9 TraesCS1A01G299400 chr1B 88.991 327 29 4 1644 1966 532161712 532162035 1.000000e-106 398.0
10 TraesCS1A01G299400 chr1B 86.667 150 10 6 1 149 532154202 532154342 1.850000e-34 158.0
11 TraesCS1A01G299400 chr1B 97.674 43 1 0 4210 4252 677776600 677776558 1.910000e-09 75.0
12 TraesCS1A01G299400 chr1B 97.674 43 1 0 4210 4252 677866569 677866527 1.910000e-09 75.0
13 TraesCS1A01G299400 chr7D 82.609 690 89 18 4296 4959 553812094 553811410 9.250000e-162 580.0
14 TraesCS1A01G299400 chr7D 93.233 133 9 0 2002 2134 454079079 454079211 3.920000e-46 196.0
15 TraesCS1A01G299400 chr7B 81.137 721 106 17 4264 4959 600996618 600997333 7.260000e-153 551.0
16 TraesCS1A01G299400 chr6A 79.718 710 112 23 4267 4959 567143991 567144685 7.460000e-133 484.0
17 TraesCS1A01G299400 chr6A 91.971 137 9 1 1998 2134 184388175 184388309 1.820000e-44 191.0
18 TraesCS1A01G299400 chr6B 83.093 485 74 8 4477 4959 638493632 638494110 7.620000e-118 435.0
19 TraesCS1A01G299400 chr6B 92.308 143 10 1 1992 2134 537553833 537553974 8.420000e-48 202.0
20 TraesCS1A01G299400 chr6B 75.669 411 92 8 4534 4939 648704845 648704438 1.090000e-46 198.0
21 TraesCS1A01G299400 chr6B 84.000 125 20 0 4815 4939 246872186 246872062 2.420000e-23 121.0
22 TraesCS1A01G299400 chr6B 96.774 31 1 0 2132 2162 642939782 642939752 9.000000e-03 52.8
23 TraesCS1A01G299400 chr7A 84.097 371 53 5 4458 4827 526617526 526617891 2.200000e-93 353.0
24 TraesCS1A01G299400 chr3D 85.849 212 28 2 4543 4752 395814370 395814581 1.800000e-54 224.0
25 TraesCS1A01G299400 chr4B 94.737 133 6 1 2002 2134 146469218 146469349 6.510000e-49 206.0
26 TraesCS1A01G299400 chr6D 92.701 137 9 1 1997 2133 221843149 221843014 3.920000e-46 196.0
27 TraesCS1A01G299400 chr6D 91.549 142 10 2 1994 2134 392273067 392273207 1.410000e-45 195.0
28 TraesCS1A01G299400 chr5B 89.933 149 10 4 1994 2138 230883375 230883522 2.360000e-43 187.0
29 TraesCS1A01G299400 chr5A 90.210 143 14 0 1990 2132 633855042 633855184 2.360000e-43 187.0
30 TraesCS1A01G299400 chrUn 83.140 172 26 3 4523 4691 103433500 103433329 2.390000e-33 154.0
31 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 229641319 229641277 1.910000e-09 75.0
32 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 238697139 238697181 1.910000e-09 75.0
33 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 265515481 265515439 1.910000e-09 75.0
34 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 343846863 343846905 1.910000e-09 75.0
35 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 368732484 368732442 1.910000e-09 75.0
36 TraesCS1A01G299400 chrUn 97.674 43 1 0 4210 4252 436856673 436856631 1.910000e-09 75.0
37 TraesCS1A01G299400 chr3B 91.765 85 7 0 4596 4680 521184408 521184492 8.720000e-23 119.0
38 TraesCS1A01G299400 chr4A 97.872 47 0 1 4209 4254 574848028 574847982 4.120000e-11 80.5
39 TraesCS1A01G299400 chr4A 94.286 35 1 1 2132 2166 473770123 473770156 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G299400 chr1A 494436454 494441412 4958 False 9158.00 9158 100.00000 1 4959 1 chr1A.!!$F1 4958
1 TraesCS1A01G299400 chr1D 397066556 397071274 4718 False 1399.25 2752 88.27100 1 4925 4 chr1D.!!$F1 4924
2 TraesCS1A01G299400 chr1B 532159899 532163861 3962 False 1112.75 2322 88.31475 149 4031 4 chr1B.!!$F2 3882
3 TraesCS1A01G299400 chr7D 553811410 553812094 684 True 580.00 580 82.60900 4296 4959 1 chr7D.!!$R1 663
4 TraesCS1A01G299400 chr7B 600996618 600997333 715 False 551.00 551 81.13700 4264 4959 1 chr7B.!!$F1 695
5 TraesCS1A01G299400 chr6A 567143991 567144685 694 False 484.00 484 79.71800 4267 4959 1 chr6A.!!$F2 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
870 1044 0.396974 AGCCAAAGGAAACACTGCCA 60.397 50.0 0.0 0.0 0.0 4.92 F
2015 2482 0.400213 AAATGCTCCCTCCGTTCACA 59.600 50.0 0.0 0.0 0.0 3.58 F
2964 3432 0.318699 GCAAAAGACCCGAAACCTGC 60.319 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2208 2675 0.179000 AGCCGCTGCAAAGCTAGTAT 59.821 50.0 2.05 0.0 41.13 2.12 R
3359 3827 0.390472 GCCTCGTCCACTCTTTCCAG 60.390 60.0 0.00 0.0 0.00 3.86 R
4403 4936 0.462759 CTGGCGATGGAGAAAGACCC 60.463 60.0 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.172342 ACTACACTATAGCAAGGATAGGAGAG 58.828 42.308 0.00 0.00 32.14 3.20
41 42 6.207509 ACACTATAGCAAGGATAGGAGAGA 57.792 41.667 0.00 0.00 32.14 3.10
42 43 6.245408 ACACTATAGCAAGGATAGGAGAGAG 58.755 44.000 0.00 0.00 32.14 3.20
43 44 5.652014 CACTATAGCAAGGATAGGAGAGAGG 59.348 48.000 0.00 0.00 32.14 3.69
74 75 4.277258 GTTAGCGCTCAAATCACATGATG 58.723 43.478 16.34 0.00 34.49 3.07
85 86 4.713824 ATCACATGATGAACCTGCAAAG 57.286 40.909 0.00 0.00 41.93 2.77
87 88 1.547372 ACATGATGAACCTGCAAAGCC 59.453 47.619 0.00 0.00 0.00 4.35
99 100 2.821969 CTGCAAAGCCATAGTGGAAACT 59.178 45.455 0.00 0.00 40.96 2.66
137 138 2.672996 GCCTGCCACCGACATTGT 60.673 61.111 0.00 0.00 0.00 2.71
139 140 1.644786 GCCTGCCACCGACATTGTAC 61.645 60.000 0.00 0.00 0.00 2.90
283 290 2.203266 GGGCCTCATAGCAGCACC 60.203 66.667 0.84 0.00 0.00 5.01
440 460 6.090763 TGCAGCTTTATATTATCACGGAATCG 59.909 38.462 0.00 0.00 43.02 3.34
441 461 6.455646 GCAGCTTTATATTATCACGGAATCGG 60.456 42.308 0.00 0.00 41.39 4.18
475 505 4.363990 CGACCTGCAGCCGTCAGT 62.364 66.667 19.16 7.24 0.00 3.41
482 523 0.882927 TGCAGCCGTCAGTGTTAACC 60.883 55.000 2.48 0.00 0.00 2.85
503 544 2.709999 CCCGTAACACGTCGCGTTC 61.710 63.158 5.77 0.00 40.58 3.95
513 554 1.130613 GTCGCGTTCACATCACAGC 59.869 57.895 5.77 0.00 0.00 4.40
519 560 1.462283 CGTTCACATCACAGCCAGAAG 59.538 52.381 0.00 0.00 0.00 2.85
526 596 3.265791 CATCACAGCCAGAAGTAGAACC 58.734 50.000 0.00 0.00 0.00 3.62
585 692 3.259374 GGAGGAGTGAGTTCAGATTGACA 59.741 47.826 0.00 0.00 0.00 3.58
592 699 5.245751 AGTGAGTTCAGATTGACAGATCACT 59.754 40.000 0.00 0.00 39.86 3.41
620 771 0.570734 CTAAACGGCGCGATACACAG 59.429 55.000 12.10 0.00 0.00 3.66
664 815 1.112113 CCCTACCTGCATGTCGTACT 58.888 55.000 0.00 0.00 0.00 2.73
665 816 1.067212 CCCTACCTGCATGTCGTACTC 59.933 57.143 0.00 0.00 0.00 2.59
826 989 2.716398 CCGCGCTAAAAAGGCTTTATC 58.284 47.619 13.77 2.16 0.00 1.75
827 990 2.540973 CCGCGCTAAAAAGGCTTTATCC 60.541 50.000 13.77 1.71 0.00 2.59
828 991 2.540973 CGCGCTAAAAAGGCTTTATCCC 60.541 50.000 13.77 2.06 0.00 3.85
852 1026 2.202623 GCTACCGGACACAGCGAG 60.203 66.667 9.46 0.00 0.00 5.03
870 1044 0.396974 AGCCAAAGGAAACACTGCCA 60.397 50.000 0.00 0.00 0.00 4.92
923 1097 2.438434 CCCCACGCCCTCATTCAC 60.438 66.667 0.00 0.00 0.00 3.18
924 1098 2.350895 CCCACGCCCTCATTCACA 59.649 61.111 0.00 0.00 0.00 3.58
928 1102 1.003355 ACGCCCTCATTCACACCAG 60.003 57.895 0.00 0.00 0.00 4.00
930 1104 0.742281 CGCCCTCATTCACACCAGAG 60.742 60.000 0.00 0.00 0.00 3.35
936 1110 1.546029 TCATTCACACCAGAGTCTCCG 59.454 52.381 0.00 0.00 0.00 4.63
943 1117 1.680651 CCAGAGTCTCCGCTCCACT 60.681 63.158 0.00 0.00 36.20 4.00
956 1130 4.087892 CCACTCCACTCCCGCTGG 62.088 72.222 0.00 0.00 0.00 4.85
978 1152 0.402887 TACCGTCTCACTCTCACCCA 59.597 55.000 0.00 0.00 0.00 4.51
1228 1436 2.673368 CGCATCTATTATCCCGCCTTTC 59.327 50.000 0.00 0.00 0.00 2.62
1235 1443 2.596904 TATCCCGCCTTTCTCTTTCG 57.403 50.000 0.00 0.00 0.00 3.46
1320 1538 6.431198 TCTCATTTCTGCGTTTTATAACCC 57.569 37.500 0.00 0.00 0.00 4.11
1382 1602 2.404789 CGCCGCAAATCGCAATCT 59.595 55.556 0.00 0.00 42.60 2.40
1392 1655 4.500477 GCAAATCGCAATCTCAAACATACC 59.500 41.667 0.00 0.00 41.79 2.73
1394 1657 2.276201 TCGCAATCTCAAACATACCCG 58.724 47.619 0.00 0.00 0.00 5.28
1409 1674 1.982938 CCCGGTCTCCTCTTCGGTT 60.983 63.158 0.00 0.00 40.78 4.44
1415 1680 1.887198 GTCTCCTCTTCGGTTGAGTGA 59.113 52.381 0.00 0.00 0.00 3.41
1427 1692 0.798389 TTGAGTGATTCGAGCGAGCG 60.798 55.000 0.00 0.00 0.00 5.03
1589 1860 1.271856 TGAGGCTGATTGGTTACGGA 58.728 50.000 0.00 0.00 0.00 4.69
1672 2139 2.540265 AATTGAGGGATAGCTGAGCG 57.460 50.000 0.00 0.00 0.00 5.03
1673 2140 0.683973 ATTGAGGGATAGCTGAGCGG 59.316 55.000 0.00 0.00 0.00 5.52
1685 2152 2.009042 GCTGAGCGGTGAGTAGCATTT 61.009 52.381 2.42 0.00 34.64 2.32
1688 2155 2.093500 TGAGCGGTGAGTAGCATTTCAT 60.093 45.455 0.00 0.00 35.48 2.57
1726 2193 1.404391 GGAACTGCAAGATCATGCCAG 59.596 52.381 19.47 17.36 45.83 4.85
1767 2234 2.046023 TGCTTGGGCATCACGAGG 60.046 61.111 0.00 0.00 44.28 4.63
1821 2288 5.730296 ACAGAGCAAGTGAAGTACTACAT 57.270 39.130 0.00 0.00 39.18 2.29
1882 2349 2.616634 TTTGTACGTGTTGGGCACTA 57.383 45.000 0.00 0.00 45.57 2.74
1930 2397 1.067142 TGGATTGTGTAGTGAGGACGC 60.067 52.381 0.00 0.00 0.00 5.19
1937 2404 2.029649 GTGTAGTGAGGACGCTTTGGTA 60.030 50.000 0.00 0.00 37.97 3.25
1945 2412 4.764823 TGAGGACGCTTTGGTATGAAATTT 59.235 37.500 0.00 0.00 0.00 1.82
1946 2413 5.059404 AGGACGCTTTGGTATGAAATTTG 57.941 39.130 0.00 0.00 0.00 2.32
1948 2415 3.584834 ACGCTTTGGTATGAAATTTGGC 58.415 40.909 0.00 0.00 0.00 4.52
1949 2416 2.598192 CGCTTTGGTATGAAATTTGGCG 59.402 45.455 0.00 0.00 0.00 5.69
1951 2418 3.612423 GCTTTGGTATGAAATTTGGCGAC 59.388 43.478 0.00 0.00 0.00 5.19
1952 2419 4.804108 CTTTGGTATGAAATTTGGCGACA 58.196 39.130 0.00 0.00 39.83 4.35
1953 2420 5.398603 TTTGGTATGAAATTTGGCGACAT 57.601 34.783 0.00 0.00 42.32 3.06
1956 2423 4.219507 TGGTATGAAATTTGGCGACATTGT 59.780 37.500 0.00 0.00 42.32 2.71
1959 2426 6.147000 GGTATGAAATTTGGCGACATTGTTTT 59.853 34.615 0.00 0.00 42.32 2.43
1961 2428 5.804173 TGAAATTTGGCGACATTGTTTTTG 58.196 33.333 0.00 0.00 42.32 2.44
1962 2429 4.809815 AATTTGGCGACATTGTTTTTGG 57.190 36.364 0.00 0.00 42.32 3.28
1965 2432 1.269517 TGGCGACATTGTTTTTGGCTC 60.270 47.619 0.00 0.00 33.40 4.70
1967 2434 1.334599 GCGACATTGTTTTTGGCTCGA 60.335 47.619 0.00 0.00 0.00 4.04
1968 2435 2.856720 GCGACATTGTTTTTGGCTCGAA 60.857 45.455 0.00 0.00 0.00 3.71
1969 2436 2.973224 CGACATTGTTTTTGGCTCGAAG 59.027 45.455 0.00 0.00 0.00 3.79
1970 2437 3.548014 CGACATTGTTTTTGGCTCGAAGT 60.548 43.478 0.00 0.00 0.00 3.01
1974 2441 1.864711 TGTTTTTGGCTCGAAGTCTCG 59.135 47.619 0.00 0.00 46.87 4.04
1987 2454 3.966154 GAAGTCTCGAACACTGTTCTCA 58.034 45.455 17.81 5.55 0.00 3.27
1989 2456 2.688446 AGTCTCGAACACTGTTCTCACA 59.312 45.455 17.81 1.32 0.00 3.58
2001 2468 5.462034 CTGTTCTCACAGCTAGTAAATGC 57.538 43.478 0.00 0.00 44.16 3.56
2002 2469 5.152623 TGTTCTCACAGCTAGTAAATGCT 57.847 39.130 0.00 0.00 40.54 3.79
2003 2470 5.171476 TGTTCTCACAGCTAGTAAATGCTC 58.829 41.667 0.00 0.00 37.44 4.26
2004 2471 4.392921 TCTCACAGCTAGTAAATGCTCC 57.607 45.455 0.00 0.00 37.44 4.70
2005 2472 3.133003 TCTCACAGCTAGTAAATGCTCCC 59.867 47.826 0.00 0.00 37.44 4.30
2006 2473 3.107601 TCACAGCTAGTAAATGCTCCCT 58.892 45.455 0.00 0.00 37.44 4.20
2007 2474 3.133003 TCACAGCTAGTAAATGCTCCCTC 59.867 47.826 0.00 0.00 37.44 4.30
2008 2475 2.436173 ACAGCTAGTAAATGCTCCCTCC 59.564 50.000 0.00 0.00 37.44 4.30
2009 2476 1.689273 AGCTAGTAAATGCTCCCTCCG 59.311 52.381 0.00 0.00 33.90 4.63
2010 2477 1.413077 GCTAGTAAATGCTCCCTCCGT 59.587 52.381 0.00 0.00 0.00 4.69
2012 2479 2.693267 AGTAAATGCTCCCTCCGTTC 57.307 50.000 0.00 0.00 0.00 3.95
2014 2481 2.007608 GTAAATGCTCCCTCCGTTCAC 58.992 52.381 0.00 0.00 0.00 3.18
2015 2482 0.400213 AAATGCTCCCTCCGTTCACA 59.600 50.000 0.00 0.00 0.00 3.58
2016 2483 0.400213 AATGCTCCCTCCGTTCACAA 59.600 50.000 0.00 0.00 0.00 3.33
2018 2485 0.400213 TGCTCCCTCCGTTCACAAAT 59.600 50.000 0.00 0.00 0.00 2.32
2020 2487 2.238646 TGCTCCCTCCGTTCACAAATAT 59.761 45.455 0.00 0.00 0.00 1.28
2021 2488 3.452990 TGCTCCCTCCGTTCACAAATATA 59.547 43.478 0.00 0.00 0.00 0.86
2022 2489 4.080807 TGCTCCCTCCGTTCACAAATATAA 60.081 41.667 0.00 0.00 0.00 0.98
2023 2490 4.511826 GCTCCCTCCGTTCACAAATATAAG 59.488 45.833 0.00 0.00 0.00 1.73
2024 2491 5.684030 GCTCCCTCCGTTCACAAATATAAGA 60.684 44.000 0.00 0.00 0.00 2.10
2025 2492 6.494666 TCCCTCCGTTCACAAATATAAGAT 57.505 37.500 0.00 0.00 0.00 2.40
2026 2493 6.288294 TCCCTCCGTTCACAAATATAAGATG 58.712 40.000 0.00 0.00 0.00 2.90
2027 2494 6.055588 CCCTCCGTTCACAAATATAAGATGT 58.944 40.000 0.00 0.00 0.00 3.06
2028 2495 6.542370 CCCTCCGTTCACAAATATAAGATGTT 59.458 38.462 0.00 0.00 0.00 2.71
2029 2496 7.254795 CCCTCCGTTCACAAATATAAGATGTTC 60.255 40.741 0.00 0.00 0.00 3.18
2030 2497 7.495934 CCTCCGTTCACAAATATAAGATGTTCT 59.504 37.037 0.00 0.00 0.00 3.01
2031 2498 9.529325 CTCCGTTCACAAATATAAGATGTTCTA 57.471 33.333 0.00 0.00 0.00 2.10
2032 2499 9.878667 TCCGTTCACAAATATAAGATGTTCTAA 57.121 29.630 0.00 0.00 0.00 2.10
2033 2500 9.916397 CCGTTCACAAATATAAGATGTTCTAAC 57.084 33.333 0.00 0.00 0.00 2.34
2062 2529 9.913310 TTTTTGTGAATGGGATGTATATAGACA 57.087 29.630 2.07 2.07 0.00 3.41
2064 2531 9.506018 TTTGTGAATGGGATGTATATAGACATG 57.494 33.333 17.40 0.00 40.18 3.21
2065 2532 8.206126 TGTGAATGGGATGTATATAGACATGT 57.794 34.615 17.40 0.00 40.18 3.21
2066 2533 8.659527 TGTGAATGGGATGTATATAGACATGTT 58.340 33.333 17.40 7.10 40.18 2.71
2067 2534 9.507329 GTGAATGGGATGTATATAGACATGTTT 57.493 33.333 17.40 5.79 40.18 2.83
2072 2539 9.996554 TGGGATGTATATAGACATGTTTTAGTG 57.003 33.333 17.40 0.00 40.18 2.74
2073 2540 9.998106 GGGATGTATATAGACATGTTTTAGTGT 57.002 33.333 17.40 0.00 40.18 3.55
2082 2549 9.719355 ATAGACATGTTTTAGTGTGTATGTTCA 57.281 29.630 0.00 0.00 34.64 3.18
2083 2550 7.861630 AGACATGTTTTAGTGTGTATGTTCAC 58.138 34.615 0.00 0.00 38.63 3.18
2084 2551 7.715249 AGACATGTTTTAGTGTGTATGTTCACT 59.285 33.333 0.00 0.00 45.21 3.41
2085 2552 7.861630 ACATGTTTTAGTGTGTATGTTCACTC 58.138 34.615 0.00 0.00 42.77 3.51
2086 2553 7.497579 ACATGTTTTAGTGTGTATGTTCACTCA 59.502 33.333 0.00 0.00 42.77 3.41
2087 2554 8.506437 CATGTTTTAGTGTGTATGTTCACTCAT 58.494 33.333 1.08 0.00 42.77 2.90
2088 2555 8.445275 TGTTTTAGTGTGTATGTTCACTCATT 57.555 30.769 1.08 0.00 42.77 2.57
2089 2556 8.898761 TGTTTTAGTGTGTATGTTCACTCATTT 58.101 29.630 1.08 0.00 42.77 2.32
2090 2557 9.382244 GTTTTAGTGTGTATGTTCACTCATTTC 57.618 33.333 1.08 0.00 42.77 2.17
2091 2558 8.669946 TTTAGTGTGTATGTTCACTCATTTCA 57.330 30.769 1.08 0.00 42.77 2.69
2092 2559 6.791887 AGTGTGTATGTTCACTCATTTCAG 57.208 37.500 0.00 0.00 40.28 3.02
2093 2560 6.291377 AGTGTGTATGTTCACTCATTTCAGT 58.709 36.000 0.00 0.00 40.28 3.41
2094 2561 6.425114 AGTGTGTATGTTCACTCATTTCAGTC 59.575 38.462 0.00 0.00 40.28 3.51
2095 2562 6.425114 GTGTGTATGTTCACTCATTTCAGTCT 59.575 38.462 0.00 0.00 38.90 3.24
2096 2563 6.424812 TGTGTATGTTCACTCATTTCAGTCTG 59.575 38.462 0.00 0.00 38.90 3.51
2097 2564 6.425114 GTGTATGTTCACTCATTTCAGTCTGT 59.575 38.462 0.00 0.00 35.68 3.41
2098 2565 7.598869 GTGTATGTTCACTCATTTCAGTCTGTA 59.401 37.037 0.00 0.00 35.68 2.74
2099 2566 8.314021 TGTATGTTCACTCATTTCAGTCTGTAT 58.686 33.333 0.00 0.00 0.00 2.29
2100 2567 7.606858 ATGTTCACTCATTTCAGTCTGTATG 57.393 36.000 0.00 5.69 0.00 2.39
2101 2568 6.524734 TGTTCACTCATTTCAGTCTGTATGT 58.475 36.000 13.61 0.32 0.00 2.29
2102 2569 7.666623 TGTTCACTCATTTCAGTCTGTATGTA 58.333 34.615 13.61 4.80 0.00 2.29
2103 2570 7.814587 TGTTCACTCATTTCAGTCTGTATGTAG 59.185 37.037 13.61 12.22 0.00 2.74
2104 2571 7.468141 TCACTCATTTCAGTCTGTATGTAGT 57.532 36.000 13.61 12.61 0.00 2.73
2105 2572 7.539436 TCACTCATTTCAGTCTGTATGTAGTC 58.461 38.462 13.61 0.00 0.00 2.59
2106 2573 6.754209 CACTCATTTCAGTCTGTATGTAGTCC 59.246 42.308 13.61 0.00 0.00 3.85
2107 2574 6.437477 ACTCATTTCAGTCTGTATGTAGTCCA 59.563 38.462 13.61 0.00 0.00 4.02
2108 2575 7.124901 ACTCATTTCAGTCTGTATGTAGTCCAT 59.875 37.037 13.61 0.00 37.58 3.41
2109 2576 8.533569 TCATTTCAGTCTGTATGTAGTCCATA 57.466 34.615 13.61 0.00 34.86 2.74
2110 2577 9.147732 TCATTTCAGTCTGTATGTAGTCCATAT 57.852 33.333 13.61 0.00 38.29 1.78
2111 2578 9.770097 CATTTCAGTCTGTATGTAGTCCATATT 57.230 33.333 0.00 0.00 38.29 1.28
2112 2579 9.770097 ATTTCAGTCTGTATGTAGTCCATATTG 57.230 33.333 0.00 0.00 38.29 1.90
2113 2580 8.533569 TTCAGTCTGTATGTAGTCCATATTGA 57.466 34.615 0.00 0.00 38.29 2.57
2114 2581 8.533569 TCAGTCTGTATGTAGTCCATATTGAA 57.466 34.615 0.00 0.00 38.29 2.69
2115 2582 8.977412 TCAGTCTGTATGTAGTCCATATTGAAA 58.023 33.333 0.00 0.00 38.29 2.69
2116 2583 9.770097 CAGTCTGTATGTAGTCCATATTGAAAT 57.230 33.333 0.00 0.00 38.29 2.17
2117 2584 9.770097 AGTCTGTATGTAGTCCATATTGAAATG 57.230 33.333 0.00 0.00 38.29 2.32
2118 2585 9.547753 GTCTGTATGTAGTCCATATTGAAATGT 57.452 33.333 0.00 0.00 38.29 2.71
2121 2588 9.898152 TGTATGTAGTCCATATTGAAATGTTCA 57.102 29.630 0.00 0.00 38.29 3.18
2142 2609 7.762615 TGTTCAAAACATCTTATACTCCCTACG 59.237 37.037 0.00 0.00 36.25 3.51
2143 2610 7.414222 TCAAAACATCTTATACTCCCTACGT 57.586 36.000 0.00 0.00 0.00 3.57
2144 2611 8.523915 TCAAAACATCTTATACTCCCTACGTA 57.476 34.615 0.00 0.00 0.00 3.57
2145 2612 9.139734 TCAAAACATCTTATACTCCCTACGTAT 57.860 33.333 0.00 0.00 0.00 3.06
2146 2613 9.408069 CAAAACATCTTATACTCCCTACGTATC 57.592 37.037 0.00 0.00 0.00 2.24
2147 2614 8.701908 AAACATCTTATACTCCCTACGTATCA 57.298 34.615 0.00 0.00 0.00 2.15
2148 2615 8.701908 AACATCTTATACTCCCTACGTATCAA 57.298 34.615 0.00 0.00 0.00 2.57
2149 2616 8.701908 ACATCTTATACTCCCTACGTATCAAA 57.298 34.615 0.00 0.00 0.00 2.69
2150 2617 9.139734 ACATCTTATACTCCCTACGTATCAAAA 57.860 33.333 0.00 0.00 0.00 2.44
2159 2626 8.295288 ACTCCCTACGTATCAAAATATAAGACG 58.705 37.037 0.00 0.00 35.10 4.18
2160 2627 8.169977 TCCCTACGTATCAAAATATAAGACGT 57.830 34.615 0.00 0.00 43.67 4.34
2161 2628 8.632679 TCCCTACGTATCAAAATATAAGACGTT 58.367 33.333 0.00 0.00 41.72 3.99
2162 2629 8.909671 CCCTACGTATCAAAATATAAGACGTTC 58.090 37.037 0.00 0.00 41.72 3.95
2163 2630 9.674824 CCTACGTATCAAAATATAAGACGTTCT 57.325 33.333 0.00 0.00 41.72 3.01
2167 2634 9.632969 CGTATCAAAATATAAGACGTTCTTTGG 57.367 33.333 5.74 0.00 37.89 3.28
2171 2638 9.491675 TCAAAATATAAGACGTTCTTTGGTACA 57.508 29.630 5.74 0.00 37.89 2.90
2172 2639 9.755064 CAAAATATAAGACGTTCTTTGGTACAG 57.245 33.333 5.74 0.00 42.39 2.74
2173 2640 9.715121 AAAATATAAGACGTTCTTTGGTACAGA 57.285 29.630 5.74 0.00 42.39 3.41
2174 2641 8.928270 AATATAAGACGTTCTTTGGTACAGAG 57.072 34.615 5.74 0.00 42.44 3.35
2175 2642 3.662247 AGACGTTCTTTGGTACAGAGG 57.338 47.619 0.00 0.00 41.30 3.69
2176 2643 2.963782 AGACGTTCTTTGGTACAGAGGT 59.036 45.455 0.00 0.00 41.30 3.85
2177 2644 4.147321 AGACGTTCTTTGGTACAGAGGTA 58.853 43.478 0.00 0.00 41.30 3.08
2178 2645 4.217983 AGACGTTCTTTGGTACAGAGGTAG 59.782 45.833 0.00 0.00 41.30 3.18
2179 2646 3.893813 ACGTTCTTTGGTACAGAGGTAGT 59.106 43.478 0.00 0.00 41.30 2.73
2180 2647 5.072741 ACGTTCTTTGGTACAGAGGTAGTA 58.927 41.667 0.00 0.00 41.30 1.82
2181 2648 5.713861 ACGTTCTTTGGTACAGAGGTAGTAT 59.286 40.000 0.00 0.00 41.30 2.12
2182 2649 6.210185 ACGTTCTTTGGTACAGAGGTAGTATT 59.790 38.462 0.00 0.00 41.30 1.89
2183 2650 7.095270 CGTTCTTTGGTACAGAGGTAGTATTT 58.905 38.462 0.00 0.00 41.30 1.40
2184 2651 7.063074 CGTTCTTTGGTACAGAGGTAGTATTTG 59.937 40.741 0.00 0.00 41.30 2.32
2185 2652 7.549147 TCTTTGGTACAGAGGTAGTATTTGT 57.451 36.000 0.00 0.00 41.30 2.83
2186 2653 7.383687 TCTTTGGTACAGAGGTAGTATTTGTG 58.616 38.462 0.00 0.00 41.30 3.33
2187 2654 6.921486 TTGGTACAGAGGTAGTATTTGTGA 57.079 37.500 0.00 0.00 42.39 3.58
2188 2655 6.921486 TGGTACAGAGGTAGTATTTGTGAA 57.079 37.500 0.00 0.00 0.00 3.18
2189 2656 7.490657 TGGTACAGAGGTAGTATTTGTGAAT 57.509 36.000 0.00 0.00 0.00 2.57
2190 2657 7.327975 TGGTACAGAGGTAGTATTTGTGAATG 58.672 38.462 0.00 0.00 0.00 2.67
2191 2658 6.761714 GGTACAGAGGTAGTATTTGTGAATGG 59.238 42.308 0.00 0.00 0.00 3.16
2192 2659 6.620877 ACAGAGGTAGTATTTGTGAATGGA 57.379 37.500 0.00 0.00 0.00 3.41
2193 2660 6.644347 ACAGAGGTAGTATTTGTGAATGGAG 58.356 40.000 0.00 0.00 0.00 3.86
2194 2661 6.213600 ACAGAGGTAGTATTTGTGAATGGAGT 59.786 38.462 0.00 0.00 0.00 3.85
2195 2662 7.399191 ACAGAGGTAGTATTTGTGAATGGAGTA 59.601 37.037 0.00 0.00 0.00 2.59
2196 2663 8.258007 CAGAGGTAGTATTTGTGAATGGAGTAA 58.742 37.037 0.00 0.00 0.00 2.24
2197 2664 8.822805 AGAGGTAGTATTTGTGAATGGAGTAAA 58.177 33.333 0.00 0.00 0.00 2.01
2198 2665 8.788325 AGGTAGTATTTGTGAATGGAGTAAAC 57.212 34.615 0.00 0.00 0.00 2.01
2199 2666 8.603304 AGGTAGTATTTGTGAATGGAGTAAACT 58.397 33.333 0.00 0.00 0.00 2.66
2200 2667 9.880157 GGTAGTATTTGTGAATGGAGTAAACTA 57.120 33.333 0.00 0.00 0.00 2.24
2203 2670 9.654663 AGTATTTGTGAATGGAGTAAACTAGTC 57.345 33.333 0.00 0.00 0.00 2.59
2204 2671 9.431887 GTATTTGTGAATGGAGTAAACTAGTCA 57.568 33.333 0.00 0.00 0.00 3.41
2205 2672 7.724305 TTTGTGAATGGAGTAAACTAGTCAC 57.276 36.000 0.00 0.00 43.07 3.67
2207 2674 6.822442 TGTGAATGGAGTAAACTAGTCACAA 58.178 36.000 11.64 0.45 46.68 3.33
2208 2675 7.276658 TGTGAATGGAGTAAACTAGTCACAAA 58.723 34.615 11.64 0.00 46.68 2.83
2209 2676 7.936847 TGTGAATGGAGTAAACTAGTCACAAAT 59.063 33.333 11.64 0.00 46.68 2.32
2210 2677 9.431887 GTGAATGGAGTAAACTAGTCACAAATA 57.568 33.333 0.00 0.00 42.60 1.40
2211 2678 9.431887 TGAATGGAGTAAACTAGTCACAAATAC 57.568 33.333 0.00 0.00 0.00 1.89
2212 2679 9.654663 GAATGGAGTAAACTAGTCACAAATACT 57.345 33.333 0.00 0.00 0.00 2.12
2215 2682 8.248945 TGGAGTAAACTAGTCACAAATACTAGC 58.751 37.037 9.58 0.00 46.88 3.42
2216 2683 8.468399 GGAGTAAACTAGTCACAAATACTAGCT 58.532 37.037 9.58 0.00 46.88 3.32
2217 2684 9.857957 GAGTAAACTAGTCACAAATACTAGCTT 57.142 33.333 9.58 7.04 46.88 3.74
2220 2687 6.969828 ACTAGTCACAAATACTAGCTTTGC 57.030 37.500 14.95 3.58 46.88 3.68
2221 2688 6.464222 ACTAGTCACAAATACTAGCTTTGCA 58.536 36.000 14.95 0.00 46.88 4.08
2222 2689 5.869753 AGTCACAAATACTAGCTTTGCAG 57.130 39.130 14.95 10.00 37.15 4.41
2223 2690 8.743186 ACTAGTCACAAATACTAGCTTTGCAGC 61.743 40.741 14.95 7.79 46.88 5.25
2246 2713 0.604578 TCATCCTGCCTTTTTGCTGC 59.395 50.000 0.00 0.00 0.00 5.25
2248 2715 1.001633 CATCCTGCCTTTTTGCTGCTT 59.998 47.619 0.00 0.00 0.00 3.91
2249 2716 0.390124 TCCTGCCTTTTTGCTGCTTG 59.610 50.000 0.00 0.00 0.00 4.01
2250 2717 0.390124 CCTGCCTTTTTGCTGCTTGA 59.610 50.000 0.00 0.00 0.00 3.02
2254 2721 1.802365 GCCTTTTTGCTGCTTGATTGG 59.198 47.619 0.00 0.00 0.00 3.16
2260 2727 6.347888 CCTTTTTGCTGCTTGATTGGTTATTG 60.348 38.462 0.00 0.00 0.00 1.90
2265 2732 5.098211 GCTGCTTGATTGGTTATTGACTTC 58.902 41.667 0.00 0.00 0.00 3.01
2267 2734 5.324409 TGCTTGATTGGTTATTGACTTCCT 58.676 37.500 0.00 0.00 0.00 3.36
2268 2735 5.415701 TGCTTGATTGGTTATTGACTTCCTC 59.584 40.000 0.00 0.00 0.00 3.71
2270 2737 6.623767 GCTTGATTGGTTATTGACTTCCTCAC 60.624 42.308 0.00 0.00 0.00 3.51
2273 2740 4.927267 TGGTTATTGACTTCCTCACCAT 57.073 40.909 0.00 0.00 0.00 3.55
2277 2744 7.235079 TGGTTATTGACTTCCTCACCATTTTA 58.765 34.615 0.00 0.00 0.00 1.52
2278 2745 7.393234 TGGTTATTGACTTCCTCACCATTTTAG 59.607 37.037 0.00 0.00 0.00 1.85
2295 2762 7.087007 CCATTTTAGAAAGAAGGCTCTTGAAC 58.913 38.462 0.00 0.00 41.23 3.18
2302 2769 4.500499 AGAAGGCTCTTGAACTGCATAT 57.500 40.909 0.00 0.00 0.00 1.78
2303 2770 5.620738 AGAAGGCTCTTGAACTGCATATA 57.379 39.130 0.00 0.00 0.00 0.86
2308 2775 4.818546 GGCTCTTGAACTGCATATACACAT 59.181 41.667 0.00 0.00 0.00 3.21
2309 2776 5.049818 GGCTCTTGAACTGCATATACACATC 60.050 44.000 0.00 0.00 0.00 3.06
2310 2777 5.525012 GCTCTTGAACTGCATATACACATCA 59.475 40.000 0.00 0.00 0.00 3.07
2311 2778 6.510799 GCTCTTGAACTGCATATACACATCAC 60.511 42.308 0.00 0.00 0.00 3.06
2312 2779 5.519927 TCTTGAACTGCATATACACATCACG 59.480 40.000 0.00 0.00 0.00 4.35
2313 2780 4.754322 TGAACTGCATATACACATCACGT 58.246 39.130 0.00 0.00 0.00 4.49
2331 2798 9.607285 ACATCACGTGTTCTTTTATTTGATAAC 57.393 29.630 16.51 0.00 38.01 1.89
2333 2800 8.155821 TCACGTGTTCTTTTATTTGATAACCA 57.844 30.769 16.51 0.00 0.00 3.67
2354 2821 8.877864 AACCAGGTCATATTTTGTTGAAGATA 57.122 30.769 0.00 0.00 0.00 1.98
2388 2855 6.925610 TCCTTATTCCATTGTCGATTTCAG 57.074 37.500 0.00 0.00 0.00 3.02
2394 2861 4.191544 TCCATTGTCGATTTCAGCTTAGG 58.808 43.478 0.00 0.00 0.00 2.69
2399 2866 4.245660 TGTCGATTTCAGCTTAGGAGTTG 58.754 43.478 0.00 0.00 35.63 3.16
2419 2886 6.711277 AGTTGAAGTCATGTTCCTGCTATAA 58.289 36.000 0.00 0.00 0.00 0.98
2509 2977 5.067805 ACTCATGAAAGTTGAGGAACAAACC 59.932 40.000 0.00 0.00 43.95 3.27
2608 3076 6.072286 AGCAGGTTATTGATGACTTGAAGTTG 60.072 38.462 0.00 0.00 0.00 3.16
2697 3165 4.524714 ACATCCACCTCCTGATATAGAACG 59.475 45.833 0.00 0.00 0.00 3.95
2702 3170 5.509840 CCACCTCCTGATATAGAACGGAAAG 60.510 48.000 0.00 0.00 0.00 2.62
2707 3175 5.068723 TCCTGATATAGAACGGAAAGTGGAC 59.931 44.000 0.00 0.00 0.00 4.02
2741 3209 3.252701 GCCACTGATCCAGAGCATAAATG 59.747 47.826 0.45 0.00 35.55 2.32
2821 3289 4.067896 ACATGGACACTGTCAAGATGTTC 58.932 43.478 11.34 0.00 33.68 3.18
2854 3322 1.416030 GAGGAGGAGAAAGCATCCCTC 59.584 57.143 13.77 13.77 41.32 4.30
2887 3355 4.441495 CGTGAGAGGGTGCAGTTGAATATA 60.441 45.833 0.00 0.00 0.00 0.86
2964 3432 0.318699 GCAAAAGACCCGAAACCTGC 60.319 55.000 0.00 0.00 0.00 4.85
3067 3535 3.242220 CGAAGCTCGAGATTGGTGAATTG 60.242 47.826 22.47 0.00 43.74 2.32
3088 3556 2.618241 GACTTCCACAATTGAGCACACA 59.382 45.455 13.59 0.00 0.00 3.72
3091 3559 2.929641 TCCACAATTGAGCACACAAGA 58.070 42.857 13.59 0.00 33.22 3.02
3133 3601 1.115326 TCAGGATCGTCATGGCCGAT 61.115 55.000 17.35 17.35 46.91 4.18
3136 3604 1.691976 AGGATCGTCATGGCCGATAAA 59.308 47.619 17.35 0.00 44.48 1.40
3169 3637 1.002011 AAGGCGGGGAGAAGCTTTC 60.002 57.895 0.00 0.04 0.00 2.62
3191 3659 2.358860 TCGCGGCGATGGGAAAAA 60.359 55.556 22.69 0.00 0.00 1.94
3217 3685 3.462678 GTGGAGGACCCGGAGAGC 61.463 72.222 0.73 0.00 37.93 4.09
3225 3693 2.336809 CCCGGAGAGCGCTACATC 59.663 66.667 11.50 9.24 0.00 3.06
3244 3712 1.135527 TCCGACGTCACACTTTCTGTT 59.864 47.619 17.16 0.00 0.00 3.16
3271 3739 4.441695 TCCAAGCTCCTGCGCGAG 62.442 66.667 12.10 5.30 45.42 5.03
3328 3796 4.189188 GCGGCAATGCAGGAGCTG 62.189 66.667 7.79 11.14 42.74 4.24
3359 3827 1.351350 ACCAGGGCAAGGTAGAACTTC 59.649 52.381 0.00 0.00 37.67 3.01
3472 3940 2.202851 CTCGCAGCCGAAGATGCT 60.203 61.111 1.58 0.00 43.87 3.79
3502 3970 2.014128 CTGCGGTCCGACCAAATAATT 58.986 47.619 17.49 0.00 38.47 1.40
3537 4005 0.884704 ACCGGCAACAGTAACAGCAG 60.885 55.000 0.00 0.00 0.00 4.24
3538 4006 0.602638 CCGGCAACAGTAACAGCAGA 60.603 55.000 0.00 0.00 0.00 4.26
3542 4010 3.435327 CGGCAACAGTAACAGCAGAAATA 59.565 43.478 0.00 0.00 0.00 1.40
3543 4011 4.083537 CGGCAACAGTAACAGCAGAAATAA 60.084 41.667 0.00 0.00 0.00 1.40
3544 4012 5.391950 CGGCAACAGTAACAGCAGAAATAAT 60.392 40.000 0.00 0.00 0.00 1.28
3545 4013 6.389906 GGCAACAGTAACAGCAGAAATAATT 58.610 36.000 0.00 0.00 0.00 1.40
3658 4129 2.747855 CCGAAGAGCACCAAGGCC 60.748 66.667 0.00 0.00 0.00 5.19
3703 4174 2.890808 TGAAGCTCGACTGTGAGTTT 57.109 45.000 8.30 8.30 41.36 2.66
3715 4186 1.486310 TGTGAGTTTGAGACTGCCACT 59.514 47.619 0.00 0.00 39.19 4.00
3742 4216 1.093159 CTACTGGTAAGACGGCGAGT 58.907 55.000 16.62 7.20 0.00 4.18
3746 4220 0.242825 TGGTAAGACGGCGAGTTCAG 59.757 55.000 16.62 0.00 0.00 3.02
3758 4232 1.989165 CGAGTTCAGCGAAGAAGAAGG 59.011 52.381 0.00 0.00 0.00 3.46
3781 4255 1.145819 GTCTCTGGGGCAGATGCTC 59.854 63.158 4.59 0.00 39.92 4.26
3817 4291 2.265589 TGTACTCGCCGATGAGGATA 57.734 50.000 8.44 0.00 45.00 2.59
3820 4294 2.208132 ACTCGCCGATGAGGATAGAT 57.792 50.000 8.44 0.00 45.00 1.98
3823 4297 2.687425 CTCGCCGATGAGGATAGATCAT 59.313 50.000 0.00 0.00 45.00 2.45
3826 4300 3.067883 CGCCGATGAGGATAGATCATGAT 59.932 47.826 8.25 8.25 45.00 2.45
3850 4324 2.032528 TCCCGCAAGCAGTTCCAG 59.967 61.111 0.00 0.00 0.00 3.86
3925 4402 1.601759 GCACAGGAAGAGGCAGCAA 60.602 57.895 0.00 0.00 0.00 3.91
3959 4436 1.291877 CTGCACCAAGGTCGTGTAGC 61.292 60.000 0.00 0.00 37.19 3.58
3960 4437 1.301401 GCACCAAGGTCGTGTAGCA 60.301 57.895 0.00 0.00 33.61 3.49
3970 4447 4.015084 AGGTCGTGTAGCATAGTGTAGTT 58.985 43.478 0.00 0.00 0.00 2.24
3971 4448 5.188434 AGGTCGTGTAGCATAGTGTAGTTA 58.812 41.667 0.00 0.00 0.00 2.24
3972 4449 5.296283 AGGTCGTGTAGCATAGTGTAGTTAG 59.704 44.000 0.00 0.00 0.00 2.34
3998 4481 6.259550 TCTTTCCAGACCGTAGTACTTTAC 57.740 41.667 0.00 0.00 0.00 2.01
4042 4532 3.737559 ATAAATGGTGCTCCTGGTTCA 57.262 42.857 6.34 0.00 34.23 3.18
4053 4543 1.133199 TCCTGGTTCAGCCCACAATTT 60.133 47.619 0.00 0.00 36.04 1.82
4069 4559 5.349543 CCACAATTTACAACCGGAGTACTAC 59.650 44.000 9.46 0.00 0.00 2.73
4070 4560 6.161381 CACAATTTACAACCGGAGTACTACT 58.839 40.000 9.46 0.00 0.00 2.57
4071 4561 6.090358 CACAATTTACAACCGGAGTACTACTG 59.910 42.308 9.46 0.00 0.00 2.74
4072 4562 5.990120 ATTTACAACCGGAGTACTACTGT 57.010 39.130 9.46 0.00 0.00 3.55
4073 4563 7.039784 ACAATTTACAACCGGAGTACTACTGTA 60.040 37.037 9.46 2.27 0.00 2.74
4074 4564 5.880054 TTACAACCGGAGTACTACTGTAC 57.120 43.478 9.46 0.00 46.89 2.90
4140 4630 1.352352 AGGTGGATGTTTAGCAGCTGT 59.648 47.619 16.64 4.79 33.29 4.40
4186 4676 9.444600 GGTGTGATAACCTGTAAATTTTCTCTA 57.555 33.333 0.00 0.00 37.24 2.43
4204 4694 3.775654 CCGGGACTCACTGAGGGC 61.776 72.222 10.86 2.27 33.35 5.19
4205 4695 2.997315 CGGGACTCACTGAGGGCA 60.997 66.667 10.86 0.00 33.35 5.36
4206 4696 2.362369 CGGGACTCACTGAGGGCAT 61.362 63.158 10.86 0.00 33.35 4.40
4207 4697 1.903877 CGGGACTCACTGAGGGCATT 61.904 60.000 10.86 0.00 33.35 3.56
4208 4698 0.329596 GGGACTCACTGAGGGCATTT 59.670 55.000 10.86 0.00 33.35 2.32
4209 4699 1.457346 GGACTCACTGAGGGCATTTG 58.543 55.000 10.86 0.00 33.35 2.32
4210 4700 1.457346 GACTCACTGAGGGCATTTGG 58.543 55.000 10.86 0.00 33.35 3.28
4211 4701 0.610232 ACTCACTGAGGGCATTTGGC 60.610 55.000 10.86 0.00 35.87 4.52
4235 4725 3.738830 TCTAACCGATCCCAATAACCG 57.261 47.619 0.00 0.00 0.00 4.44
4236 4726 2.366266 TCTAACCGATCCCAATAACCGG 59.634 50.000 0.00 0.00 45.09 5.28
4242 4732 3.554337 CCGATCCCAATAACCGGTTAGAG 60.554 52.174 29.49 22.96 35.83 2.43
4243 4733 3.554337 CGATCCCAATAACCGGTTAGAGG 60.554 52.174 29.49 28.88 0.00 3.69
4245 4735 3.036091 TCCCAATAACCGGTTAGAGGAG 58.964 50.000 33.31 25.84 0.00 3.69
4258 4748 4.222810 GGTTAGAGGAGTAAAACCCGGTTA 59.777 45.833 2.39 0.00 36.24 2.85
4259 4749 5.414360 GTTAGAGGAGTAAAACCCGGTTAG 58.586 45.833 2.39 0.00 0.00 2.34
4260 4750 3.514539 AGAGGAGTAAAACCCGGTTAGT 58.485 45.455 2.39 0.00 0.00 2.24
4261 4751 4.677182 AGAGGAGTAAAACCCGGTTAGTA 58.323 43.478 2.39 0.00 0.00 1.82
4262 4752 4.464244 AGAGGAGTAAAACCCGGTTAGTAC 59.536 45.833 2.39 9.25 0.00 2.73
4315 4847 3.613432 CGCCCTATATTTACTCCACCGTC 60.613 52.174 0.00 0.00 0.00 4.79
4316 4848 3.613432 GCCCTATATTTACTCCACCGTCG 60.613 52.174 0.00 0.00 0.00 5.12
4317 4849 3.822735 CCCTATATTTACTCCACCGTCGA 59.177 47.826 0.00 0.00 0.00 4.20
4321 4853 0.037975 TTTACTCCACCGTCGAAGGC 60.038 55.000 17.91 0.00 33.69 4.35
4397 4930 3.706373 GCTGGCGACTCCTCCCAA 61.706 66.667 0.00 0.00 35.26 4.12
4399 4932 3.316573 CTGGCGACTCCTCCCAACC 62.317 68.421 0.00 0.00 35.26 3.77
4400 4933 4.097361 GGCGACTCCTCCCAACCC 62.097 72.222 0.00 0.00 0.00 4.11
4401 4934 4.097361 GCGACTCCTCCCAACCCC 62.097 72.222 0.00 0.00 0.00 4.95
4403 4936 3.400054 GACTCCTCCCAACCCCCG 61.400 72.222 0.00 0.00 0.00 5.73
4431 4987 4.519437 CATCGCCAGCGCTCCTCA 62.519 66.667 7.13 0.00 39.59 3.86
4436 4992 4.379243 CCAGCGCTCCTCACCGTT 62.379 66.667 7.13 0.00 0.00 4.44
4559 5115 2.756283 CGACTTCCCCGAGCTCCT 60.756 66.667 8.47 0.00 0.00 3.69
4675 5231 1.064825 AAAGTGGACCGGGTCATTCT 58.935 50.000 27.32 18.05 33.68 2.40
4791 5349 4.962836 ACCTCGTCCCGTCGGTGT 62.963 66.667 11.06 0.00 32.81 4.16
4810 5368 3.239253 GGGTGTGGTGACCTCGGT 61.239 66.667 2.11 0.00 36.14 4.69
4845 5403 1.153745 CAGGAGGCGAGGAAGAACG 60.154 63.158 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 5.652014 CCTCTCTCCTATCCTTGCTATAGTG 59.348 48.000 0.84 0.00 0.00 2.74
20 21 5.553953 TCCTCTCTCCTATCCTTGCTATAGT 59.446 44.000 0.84 0.00 0.00 2.12
21 22 6.073447 TCCTCTCTCCTATCCTTGCTATAG 57.927 45.833 0.00 0.00 0.00 1.31
22 23 5.044476 CCTCCTCTCTCCTATCCTTGCTATA 60.044 48.000 0.00 0.00 0.00 1.31
23 24 4.264352 CCTCCTCTCTCCTATCCTTGCTAT 60.264 50.000 0.00 0.00 0.00 2.97
26 27 2.158385 TCCTCCTCTCTCCTATCCTTGC 60.158 54.545 0.00 0.00 0.00 4.01
34 35 1.693799 ACCTCTTCCTCCTCTCTCCT 58.306 55.000 0.00 0.00 0.00 3.69
40 41 0.103390 GCGCTAACCTCTTCCTCCTC 59.897 60.000 0.00 0.00 0.00 3.71
41 42 0.324830 AGCGCTAACCTCTTCCTCCT 60.325 55.000 8.99 0.00 0.00 3.69
42 43 0.103390 GAGCGCTAACCTCTTCCTCC 59.897 60.000 11.50 0.00 0.00 4.30
43 44 0.818296 TGAGCGCTAACCTCTTCCTC 59.182 55.000 11.50 0.00 0.00 3.71
74 75 1.474077 CCACTATGGCTTTGCAGGTTC 59.526 52.381 0.00 0.00 0.00 3.62
85 86 1.544724 TTGGCAGTTTCCACTATGGC 58.455 50.000 0.00 0.00 37.47 4.40
87 88 3.763360 TGGATTTGGCAGTTTCCACTATG 59.237 43.478 10.09 0.00 35.50 2.23
99 100 1.304381 GGGCTCTGTGGATTTGGCA 60.304 57.895 0.00 0.00 0.00 4.92
137 138 4.447290 AGTGCCATGCATATGTTTACGTA 58.553 39.130 0.00 0.00 41.91 3.57
139 140 3.969117 AGTGCCATGCATATGTTTACG 57.031 42.857 0.00 0.00 41.91 3.18
283 290 4.510340 CCCAACTTATAATCGGAAAGTCGG 59.490 45.833 0.00 0.00 32.42 4.79
320 327 1.944676 CGCCGTTCATCTCCTACGC 60.945 63.158 0.00 0.00 34.16 4.42
323 330 1.141019 GCACGCCGTTCATCTCCTA 59.859 57.895 0.00 0.00 0.00 2.94
330 337 2.280457 TGTCATGCACGCCGTTCA 60.280 55.556 0.00 0.00 0.00 3.18
331 338 2.173382 GTGTCATGCACGCCGTTC 59.827 61.111 0.00 0.00 38.45 3.95
419 439 6.812160 AGACCGATTCCGTGATAATATAAAGC 59.188 38.462 0.00 0.00 0.00 3.51
440 460 6.293462 GCAGGTCGATGGATTATTTTTAGACC 60.293 42.308 2.88 2.88 44.14 3.85
441 461 6.260050 TGCAGGTCGATGGATTATTTTTAGAC 59.740 38.462 0.00 0.00 0.00 2.59
475 505 0.602372 GTGTTACGGGCCGGTTAACA 60.602 55.000 28.05 28.05 0.00 2.41
503 544 3.599730 TCTACTTCTGGCTGTGATGTG 57.400 47.619 0.00 0.00 0.00 3.21
513 554 6.289064 AGTAAAACAGTGGTTCTACTTCTGG 58.711 40.000 0.00 0.00 37.47 3.86
519 560 4.386954 GGCGTAGTAAAACAGTGGTTCTAC 59.613 45.833 8.92 8.92 35.82 2.59
526 596 1.073177 CCCGGCGTAGTAAAACAGTG 58.927 55.000 6.01 0.00 0.00 3.66
585 692 4.393062 CCGTTTAGCATTTCACAGTGATCT 59.607 41.667 3.45 2.64 0.00 2.75
592 699 0.109964 GCGCCGTTTAGCATTTCACA 60.110 50.000 0.00 0.00 0.00 3.58
643 794 1.682451 TACGACATGCAGGTAGGGCC 61.682 60.000 15.89 0.00 37.58 5.80
717 873 0.395724 AAAGATCGTTGGATGGGGCC 60.396 55.000 0.00 0.00 31.51 5.80
826 989 2.915659 TCCGGTAGCGCCTATGGG 60.916 66.667 9.24 0.00 34.25 4.00
827 990 2.338984 GTCCGGTAGCGCCTATGG 59.661 66.667 9.24 1.04 34.25 2.74
828 991 1.299926 GTGTCCGGTAGCGCCTATG 60.300 63.158 9.24 0.00 34.25 2.23
852 1026 0.249447 GTGGCAGTGTTTCCTTTGGC 60.249 55.000 0.00 0.00 36.72 4.52
905 1079 3.727258 TGAATGAGGGCGTGGGGG 61.727 66.667 0.00 0.00 0.00 5.40
909 1083 1.300971 CTGGTGTGAATGAGGGCGTG 61.301 60.000 0.00 0.00 0.00 5.34
919 1093 0.827925 AGCGGAGACTCTGGTGTGAA 60.828 55.000 15.15 0.00 31.36 3.18
923 1097 1.979155 TGGAGCGGAGACTCTGGTG 60.979 63.158 20.46 0.89 32.96 4.17
924 1098 1.979693 GTGGAGCGGAGACTCTGGT 60.980 63.158 15.81 15.81 35.97 4.00
928 1102 1.679305 TGGAGTGGAGCGGAGACTC 60.679 63.158 0.00 0.00 36.22 3.36
930 1104 1.939769 GAGTGGAGTGGAGCGGAGAC 61.940 65.000 0.00 0.00 0.00 3.36
936 1110 4.459089 GCGGGAGTGGAGTGGAGC 62.459 72.222 0.00 0.00 0.00 4.70
956 1130 0.452585 GTGAGAGTGAGACGGTAGCC 59.547 60.000 0.00 0.00 0.00 3.93
1065 1270 2.805353 CGCACGGACTCGAACTGG 60.805 66.667 0.00 0.00 40.11 4.00
1204 1412 1.090052 GCGGGATAATAGATGCGGGC 61.090 60.000 0.00 0.00 0.00 6.13
1228 1436 2.357517 ACCACCTGCGCGAAAGAG 60.358 61.111 12.10 3.31 0.00 2.85
1255 1470 3.907260 ATGTGACGGCCACCAGCAG 62.907 63.158 2.24 0.00 46.50 4.24
1382 1602 1.829222 GAGGAGACCGGGTATGTTTGA 59.171 52.381 6.32 0.00 0.00 2.69
1392 1655 1.215647 CAACCGAAGAGGAGACCGG 59.784 63.158 0.00 0.00 45.00 5.28
1394 1657 1.067495 CACTCAACCGAAGAGGAGACC 60.067 57.143 0.00 0.00 45.00 3.85
1409 1674 1.226407 CGCTCGCTCGAATCACTCA 60.226 57.895 0.00 0.00 0.00 3.41
1548 1813 6.507900 TCAAGATCCAATAGTCGAGCTTTAG 58.492 40.000 0.00 0.00 32.63 1.85
1552 1817 3.320541 CCTCAAGATCCAATAGTCGAGCT 59.679 47.826 0.00 0.00 0.00 4.09
1589 1860 1.913419 ACAACCTATTCCACCGGATGT 59.087 47.619 9.46 0.00 0.00 3.06
1597 1868 3.655777 AGGGAAAGTGACAACCTATTCCA 59.344 43.478 4.90 0.00 36.48 3.53
1599 1870 4.652822 ACAGGGAAAGTGACAACCTATTC 58.347 43.478 0.00 0.00 0.00 1.75
1672 2139 3.129287 CCAACCATGAAATGCTACTCACC 59.871 47.826 0.00 0.00 44.97 4.02
1673 2140 3.758554 ACCAACCATGAAATGCTACTCAC 59.241 43.478 0.00 0.00 44.97 3.51
1685 2152 0.747644 CCGCAGCATACCAACCATGA 60.748 55.000 0.00 0.00 0.00 3.07
1688 2155 1.078497 CTCCGCAGCATACCAACCA 60.078 57.895 0.00 0.00 0.00 3.67
1726 2193 1.482593 ACACCACTAGGCTAGCATCAC 59.517 52.381 21.26 0.00 39.06 3.06
1821 2288 3.497332 AGGACACACACTAGCAGAGTAA 58.503 45.455 0.00 0.00 35.64 2.24
1930 2397 4.804108 TGTCGCCAAATTTCATACCAAAG 58.196 39.130 0.00 0.00 0.00 2.77
1937 2404 6.428799 CAAAAACAATGTCGCCAAATTTCAT 58.571 32.000 0.00 0.00 0.00 2.57
1945 2412 0.749649 AGCCAAAAACAATGTCGCCA 59.250 45.000 0.00 0.00 0.00 5.69
1946 2413 1.418373 GAGCCAAAAACAATGTCGCC 58.582 50.000 0.00 0.00 0.00 5.54
1948 2415 2.679355 TCGAGCCAAAAACAATGTCG 57.321 45.000 0.00 0.00 0.00 4.35
1949 2416 3.964909 ACTTCGAGCCAAAAACAATGTC 58.035 40.909 0.00 0.00 0.00 3.06
1951 2418 4.222114 GAGACTTCGAGCCAAAAACAATG 58.778 43.478 0.00 0.00 0.00 2.82
1952 2419 4.489679 GAGACTTCGAGCCAAAAACAAT 57.510 40.909 0.00 0.00 0.00 2.71
1953 2420 3.963383 GAGACTTCGAGCCAAAAACAA 57.037 42.857 0.00 0.00 0.00 2.83
1967 2434 3.130516 TGTGAGAACAGTGTTCGAGACTT 59.869 43.478 26.17 11.06 0.00 3.01
1968 2435 2.688446 TGTGAGAACAGTGTTCGAGACT 59.312 45.455 26.17 11.75 0.00 3.24
1969 2436 3.046390 CTGTGAGAACAGTGTTCGAGAC 58.954 50.000 26.17 22.53 33.32 3.36
1970 2437 2.543861 GCTGTGAGAACAGTGTTCGAGA 60.544 50.000 26.17 16.11 39.76 4.04
1974 2441 3.983741 ACTAGCTGTGAGAACAGTGTTC 58.016 45.455 25.51 25.51 39.76 3.18
1987 2454 2.436173 GGAGGGAGCATTTACTAGCTGT 59.564 50.000 0.00 0.00 42.04 4.40
1989 2456 1.689273 CGGAGGGAGCATTTACTAGCT 59.311 52.381 0.00 0.00 45.25 3.32
2000 2467 2.396590 TATTTGTGAACGGAGGGAGC 57.603 50.000 0.00 0.00 0.00 4.70
2001 2468 5.914033 TCTTATATTTGTGAACGGAGGGAG 58.086 41.667 0.00 0.00 0.00 4.30
2002 2469 5.943349 TCTTATATTTGTGAACGGAGGGA 57.057 39.130 0.00 0.00 0.00 4.20
2003 2470 6.055588 ACATCTTATATTTGTGAACGGAGGG 58.944 40.000 0.00 0.00 0.00 4.30
2004 2471 7.495934 AGAACATCTTATATTTGTGAACGGAGG 59.504 37.037 0.00 0.00 0.00 4.30
2005 2472 8.425577 AGAACATCTTATATTTGTGAACGGAG 57.574 34.615 0.00 0.00 0.00 4.63
2006 2473 9.878667 TTAGAACATCTTATATTTGTGAACGGA 57.121 29.630 0.00 0.00 0.00 4.69
2007 2474 9.916397 GTTAGAACATCTTATATTTGTGAACGG 57.084 33.333 0.00 0.00 0.00 4.44
2036 2503 9.913310 TGTCTATATACATCCCATTCACAAAAA 57.087 29.630 0.00 0.00 0.00 1.94
2038 2505 9.506018 CATGTCTATATACATCCCATTCACAAA 57.494 33.333 0.94 0.00 38.01 2.83
2039 2506 8.659527 ACATGTCTATATACATCCCATTCACAA 58.340 33.333 0.94 0.00 38.01 3.33
2040 2507 8.206126 ACATGTCTATATACATCCCATTCACA 57.794 34.615 0.94 0.00 38.01 3.58
2041 2508 9.507329 AAACATGTCTATATACATCCCATTCAC 57.493 33.333 0.00 0.00 38.01 3.18
2046 2513 9.996554 CACTAAAACATGTCTATATACATCCCA 57.003 33.333 0.00 0.00 38.01 4.37
2047 2514 9.998106 ACACTAAAACATGTCTATATACATCCC 57.002 33.333 0.00 0.00 38.01 3.85
2056 2523 9.719355 TGAACATACACACTAAAACATGTCTAT 57.281 29.630 0.00 0.00 0.00 1.98
2057 2524 8.984764 GTGAACATACACACTAAAACATGTCTA 58.015 33.333 0.00 0.00 40.11 2.59
2058 2525 7.715249 AGTGAACATACACACTAAAACATGTCT 59.285 33.333 0.00 0.00 44.06 3.41
2059 2526 7.861630 AGTGAACATACACACTAAAACATGTC 58.138 34.615 0.00 0.00 44.06 3.06
2060 2527 7.497579 TGAGTGAACATACACACTAAAACATGT 59.502 33.333 0.00 0.00 45.54 3.21
2061 2528 7.860613 TGAGTGAACATACACACTAAAACATG 58.139 34.615 0.00 0.00 45.54 3.21
2062 2529 8.621532 ATGAGTGAACATACACACTAAAACAT 57.378 30.769 0.00 0.00 45.54 2.71
2063 2530 8.445275 AATGAGTGAACATACACACTAAAACA 57.555 30.769 0.00 0.00 45.54 2.83
2064 2531 9.382244 GAAATGAGTGAACATACACACTAAAAC 57.618 33.333 0.00 0.00 45.54 2.43
2065 2532 9.114952 TGAAATGAGTGAACATACACACTAAAA 57.885 29.630 0.00 0.00 45.54 1.52
2066 2533 8.669946 TGAAATGAGTGAACATACACACTAAA 57.330 30.769 0.00 0.00 45.54 1.85
2067 2534 7.931407 ACTGAAATGAGTGAACATACACACTAA 59.069 33.333 0.00 0.00 45.54 2.24
2068 2535 7.441836 ACTGAAATGAGTGAACATACACACTA 58.558 34.615 0.00 0.00 45.54 2.74
2070 2537 6.425114 AGACTGAAATGAGTGAACATACACAC 59.575 38.462 0.00 0.00 42.45 3.82
2071 2538 6.424812 CAGACTGAAATGAGTGAACATACACA 59.575 38.462 0.00 0.00 42.45 3.72
2072 2539 6.425114 ACAGACTGAAATGAGTGAACATACAC 59.575 38.462 10.08 0.00 40.60 2.90
2073 2540 6.524734 ACAGACTGAAATGAGTGAACATACA 58.475 36.000 10.08 0.00 0.00 2.29
2074 2541 8.598924 CATACAGACTGAAATGAGTGAACATAC 58.401 37.037 10.08 0.00 0.00 2.39
2075 2542 8.314021 ACATACAGACTGAAATGAGTGAACATA 58.686 33.333 21.47 0.00 0.00 2.29
2076 2543 7.164122 ACATACAGACTGAAATGAGTGAACAT 58.836 34.615 21.47 0.00 0.00 2.71
2077 2544 6.524734 ACATACAGACTGAAATGAGTGAACA 58.475 36.000 21.47 0.00 0.00 3.18
2078 2545 7.815068 ACTACATACAGACTGAAATGAGTGAAC 59.185 37.037 21.47 0.00 0.00 3.18
2079 2546 7.896811 ACTACATACAGACTGAAATGAGTGAA 58.103 34.615 21.47 7.35 0.00 3.18
2080 2547 7.363007 GGACTACATACAGACTGAAATGAGTGA 60.363 40.741 21.47 8.83 0.00 3.41
2081 2548 6.754209 GGACTACATACAGACTGAAATGAGTG 59.246 42.308 21.47 14.86 0.00 3.51
2082 2549 6.437477 TGGACTACATACAGACTGAAATGAGT 59.563 38.462 21.47 18.93 0.00 3.41
2083 2550 6.867550 TGGACTACATACAGACTGAAATGAG 58.132 40.000 21.47 17.00 0.00 2.90
2084 2551 6.850752 TGGACTACATACAGACTGAAATGA 57.149 37.500 21.47 9.94 0.00 2.57
2085 2552 9.770097 AATATGGACTACATACAGACTGAAATG 57.230 33.333 10.08 14.00 44.41 2.32
2086 2553 9.770097 CAATATGGACTACATACAGACTGAAAT 57.230 33.333 10.08 0.00 44.41 2.17
2087 2554 8.977412 TCAATATGGACTACATACAGACTGAAA 58.023 33.333 10.08 0.00 44.41 2.69
2088 2555 8.533569 TCAATATGGACTACATACAGACTGAA 57.466 34.615 10.08 0.00 44.41 3.02
2089 2556 8.533569 TTCAATATGGACTACATACAGACTGA 57.466 34.615 10.08 0.00 44.41 3.41
2090 2557 9.770097 ATTTCAATATGGACTACATACAGACTG 57.230 33.333 0.00 0.00 44.41 3.51
2091 2558 9.770097 CATTTCAATATGGACTACATACAGACT 57.230 33.333 0.00 0.00 44.41 3.24
2092 2559 9.547753 ACATTTCAATATGGACTACATACAGAC 57.452 33.333 0.00 0.00 44.41 3.51
2095 2562 9.898152 TGAACATTTCAATATGGACTACATACA 57.102 29.630 0.00 0.00 38.61 2.29
2116 2583 7.762615 CGTAGGGAGTATAAGATGTTTTGAACA 59.237 37.037 0.00 0.00 46.94 3.18
2117 2584 7.763071 ACGTAGGGAGTATAAGATGTTTTGAAC 59.237 37.037 0.00 0.00 0.00 3.18
2118 2585 7.844009 ACGTAGGGAGTATAAGATGTTTTGAA 58.156 34.615 0.00 0.00 0.00 2.69
2119 2586 7.414222 ACGTAGGGAGTATAAGATGTTTTGA 57.586 36.000 0.00 0.00 0.00 2.69
2120 2587 9.408069 GATACGTAGGGAGTATAAGATGTTTTG 57.592 37.037 0.08 0.00 35.19 2.44
2121 2588 9.139734 TGATACGTAGGGAGTATAAGATGTTTT 57.860 33.333 0.08 0.00 35.19 2.43
2122 2589 8.701908 TGATACGTAGGGAGTATAAGATGTTT 57.298 34.615 0.08 0.00 35.19 2.83
2123 2590 8.701908 TTGATACGTAGGGAGTATAAGATGTT 57.298 34.615 0.08 0.00 35.19 2.71
2124 2591 8.701908 TTTGATACGTAGGGAGTATAAGATGT 57.298 34.615 0.08 0.00 35.19 3.06
2133 2600 8.295288 CGTCTTATATTTTGATACGTAGGGAGT 58.705 37.037 0.08 0.00 0.00 3.85
2134 2601 8.295288 ACGTCTTATATTTTGATACGTAGGGAG 58.705 37.037 0.08 0.00 39.98 4.30
2135 2602 8.169977 ACGTCTTATATTTTGATACGTAGGGA 57.830 34.615 0.08 0.00 39.98 4.20
2136 2603 8.807667 AACGTCTTATATTTTGATACGTAGGG 57.192 34.615 0.08 0.00 40.79 3.53
2137 2604 9.674824 AGAACGTCTTATATTTTGATACGTAGG 57.325 33.333 0.08 0.00 40.79 3.18
2141 2608 9.632969 CCAAAGAACGTCTTATATTTTGATACG 57.367 33.333 0.00 0.00 35.27 3.06
2145 2612 9.491675 TGTACCAAAGAACGTCTTATATTTTGA 57.508 29.630 0.00 0.00 35.27 2.69
2146 2613 9.755064 CTGTACCAAAGAACGTCTTATATTTTG 57.245 33.333 0.00 0.00 35.27 2.44
2147 2614 9.715121 TCTGTACCAAAGAACGTCTTATATTTT 57.285 29.630 0.00 0.00 35.27 1.82
2148 2615 9.367444 CTCTGTACCAAAGAACGTCTTATATTT 57.633 33.333 0.00 0.00 35.27 1.40
2149 2616 7.980099 CCTCTGTACCAAAGAACGTCTTATATT 59.020 37.037 0.00 0.00 35.27 1.28
2150 2617 7.123847 ACCTCTGTACCAAAGAACGTCTTATAT 59.876 37.037 0.00 0.00 35.27 0.86
2151 2618 6.435277 ACCTCTGTACCAAAGAACGTCTTATA 59.565 38.462 0.00 0.00 35.27 0.98
2152 2619 5.245526 ACCTCTGTACCAAAGAACGTCTTAT 59.754 40.000 0.00 0.00 35.27 1.73
2153 2620 4.586001 ACCTCTGTACCAAAGAACGTCTTA 59.414 41.667 0.00 0.00 35.27 2.10
2154 2621 3.387050 ACCTCTGTACCAAAGAACGTCTT 59.613 43.478 0.00 0.00 38.59 3.01
2155 2622 2.963782 ACCTCTGTACCAAAGAACGTCT 59.036 45.455 0.00 0.00 0.00 4.18
2156 2623 3.382048 ACCTCTGTACCAAAGAACGTC 57.618 47.619 0.00 0.00 0.00 4.34
2157 2624 3.893813 ACTACCTCTGTACCAAAGAACGT 59.106 43.478 0.00 0.00 0.00 3.99
2158 2625 4.516365 ACTACCTCTGTACCAAAGAACG 57.484 45.455 0.00 0.00 0.00 3.95
2159 2626 7.876582 ACAAATACTACCTCTGTACCAAAGAAC 59.123 37.037 0.00 0.00 0.00 3.01
2160 2627 7.876068 CACAAATACTACCTCTGTACCAAAGAA 59.124 37.037 0.00 0.00 0.00 2.52
2161 2628 7.233962 TCACAAATACTACCTCTGTACCAAAGA 59.766 37.037 0.00 0.00 0.00 2.52
2162 2629 7.383687 TCACAAATACTACCTCTGTACCAAAG 58.616 38.462 0.00 0.00 0.00 2.77
2163 2630 7.305813 TCACAAATACTACCTCTGTACCAAA 57.694 36.000 0.00 0.00 0.00 3.28
2164 2631 6.921486 TCACAAATACTACCTCTGTACCAA 57.079 37.500 0.00 0.00 0.00 3.67
2165 2632 6.921486 TTCACAAATACTACCTCTGTACCA 57.079 37.500 0.00 0.00 0.00 3.25
2166 2633 6.761714 CCATTCACAAATACTACCTCTGTACC 59.238 42.308 0.00 0.00 0.00 3.34
2167 2634 7.553334 TCCATTCACAAATACTACCTCTGTAC 58.447 38.462 0.00 0.00 0.00 2.90
2168 2635 7.399191 ACTCCATTCACAAATACTACCTCTGTA 59.601 37.037 0.00 0.00 0.00 2.74
2169 2636 6.213600 ACTCCATTCACAAATACTACCTCTGT 59.786 38.462 0.00 0.00 0.00 3.41
2170 2637 6.644347 ACTCCATTCACAAATACTACCTCTG 58.356 40.000 0.00 0.00 0.00 3.35
2171 2638 6.875972 ACTCCATTCACAAATACTACCTCT 57.124 37.500 0.00 0.00 0.00 3.69
2172 2639 8.880750 GTTTACTCCATTCACAAATACTACCTC 58.119 37.037 0.00 0.00 0.00 3.85
2173 2640 8.603304 AGTTTACTCCATTCACAAATACTACCT 58.397 33.333 0.00 0.00 0.00 3.08
2174 2641 8.788325 AGTTTACTCCATTCACAAATACTACC 57.212 34.615 0.00 0.00 0.00 3.18
2177 2644 9.654663 GACTAGTTTACTCCATTCACAAATACT 57.345 33.333 0.00 0.00 0.00 2.12
2178 2645 9.431887 TGACTAGTTTACTCCATTCACAAATAC 57.568 33.333 0.00 0.00 0.00 1.89
2179 2646 9.431887 GTGACTAGTTTACTCCATTCACAAATA 57.568 33.333 0.00 0.00 0.00 1.40
2180 2647 7.936847 TGTGACTAGTTTACTCCATTCACAAAT 59.063 33.333 0.00 0.00 32.48 2.32
2181 2648 7.276658 TGTGACTAGTTTACTCCATTCACAAA 58.723 34.615 0.00 0.00 32.48 2.83
2182 2649 6.822442 TGTGACTAGTTTACTCCATTCACAA 58.178 36.000 0.00 0.00 32.48 3.33
2183 2650 6.413783 TGTGACTAGTTTACTCCATTCACA 57.586 37.500 0.00 0.00 32.89 3.58
2184 2651 7.724305 TTTGTGACTAGTTTACTCCATTCAC 57.276 36.000 0.00 0.00 0.00 3.18
2185 2652 9.431887 GTATTTGTGACTAGTTTACTCCATTCA 57.568 33.333 0.00 0.00 0.00 2.57
2186 2653 9.654663 AGTATTTGTGACTAGTTTACTCCATTC 57.345 33.333 0.00 0.00 0.00 2.67
2189 2656 8.248945 GCTAGTATTTGTGACTAGTTTACTCCA 58.751 37.037 10.60 0.00 45.51 3.86
2190 2657 8.468399 AGCTAGTATTTGTGACTAGTTTACTCC 58.532 37.037 10.60 0.00 45.51 3.85
2191 2658 9.857957 AAGCTAGTATTTGTGACTAGTTTACTC 57.142 33.333 9.34 0.00 44.35 2.59
2194 2661 8.932791 GCAAAGCTAGTATTTGTGACTAGTTTA 58.067 33.333 18.05 0.00 44.98 2.01
2195 2662 7.444183 TGCAAAGCTAGTATTTGTGACTAGTTT 59.556 33.333 18.05 8.40 46.59 2.66
2196 2663 6.934645 TGCAAAGCTAGTATTTGTGACTAGTT 59.065 34.615 18.05 3.14 45.51 2.24
2197 2664 6.464222 TGCAAAGCTAGTATTTGTGACTAGT 58.536 36.000 18.05 0.00 45.51 2.57
2198 2665 6.456181 GCTGCAAAGCTAGTATTTGTGACTAG 60.456 42.308 18.05 5.62 46.18 2.57
2199 2666 5.351465 GCTGCAAAGCTAGTATTTGTGACTA 59.649 40.000 18.05 0.00 39.36 2.59
2200 2667 4.154918 GCTGCAAAGCTAGTATTTGTGACT 59.845 41.667 18.05 0.00 39.36 3.41
2201 2668 4.406943 GCTGCAAAGCTAGTATTTGTGAC 58.593 43.478 18.05 7.56 39.36 3.67
2202 2669 3.125146 CGCTGCAAAGCTAGTATTTGTGA 59.875 43.478 18.05 8.94 39.36 3.58
2203 2670 3.419915 CGCTGCAAAGCTAGTATTTGTG 58.580 45.455 18.05 13.87 39.36 3.33
2204 2671 2.420022 CCGCTGCAAAGCTAGTATTTGT 59.580 45.455 18.05 0.00 39.36 2.83
2205 2672 2.792542 GCCGCTGCAAAGCTAGTATTTG 60.793 50.000 14.62 14.62 39.99 2.32
2206 2673 1.401905 GCCGCTGCAAAGCTAGTATTT 59.598 47.619 0.00 0.00 37.47 1.40
2207 2674 1.017387 GCCGCTGCAAAGCTAGTATT 58.983 50.000 0.00 0.00 37.47 1.89
2208 2675 0.179000 AGCCGCTGCAAAGCTAGTAT 59.821 50.000 2.05 0.00 41.13 2.12
2209 2676 0.460284 GAGCCGCTGCAAAGCTAGTA 60.460 55.000 0.00 0.00 41.13 1.82
2210 2677 1.743252 GAGCCGCTGCAAAGCTAGT 60.743 57.895 0.00 0.00 41.13 2.57
2211 2678 1.094073 ATGAGCCGCTGCAAAGCTAG 61.094 55.000 0.00 0.00 41.13 3.42
2212 2679 1.078214 ATGAGCCGCTGCAAAGCTA 60.078 52.632 0.00 0.20 41.13 3.32
2213 2680 2.360852 ATGAGCCGCTGCAAAGCT 60.361 55.556 0.00 8.35 41.13 3.74
2214 2681 2.101770 GATGAGCCGCTGCAAAGC 59.898 61.111 0.00 0.00 41.13 3.51
2215 2682 1.748122 AGGATGAGCCGCTGCAAAG 60.748 57.895 0.00 0.00 43.43 2.77
2216 2683 2.042259 CAGGATGAGCCGCTGCAAA 61.042 57.895 0.00 0.00 43.43 3.68
2217 2684 2.437180 CAGGATGAGCCGCTGCAA 60.437 61.111 0.00 0.00 43.43 4.08
2225 2692 0.893447 AGCAAAAAGGCAGGATGAGC 59.107 50.000 0.00 0.00 39.69 4.26
2226 2693 1.403780 GCAGCAAAAAGGCAGGATGAG 60.404 52.381 0.00 0.00 39.69 2.90
2227 2694 0.604578 GCAGCAAAAAGGCAGGATGA 59.395 50.000 0.00 0.00 39.69 2.92
2228 2695 0.606604 AGCAGCAAAAAGGCAGGATG 59.393 50.000 0.00 0.00 40.87 3.51
2246 2713 6.127897 GGTGAGGAAGTCAATAACCAATCAAG 60.128 42.308 0.00 0.00 36.74 3.02
2248 2715 5.222027 TGGTGAGGAAGTCAATAACCAATCA 60.222 40.000 0.00 0.00 36.74 2.57
2249 2716 5.253330 TGGTGAGGAAGTCAATAACCAATC 58.747 41.667 0.00 0.00 36.74 2.67
2250 2717 5.255397 TGGTGAGGAAGTCAATAACCAAT 57.745 39.130 0.00 0.00 36.74 3.16
2254 2721 8.561738 TCTAAAATGGTGAGGAAGTCAATAAC 57.438 34.615 0.00 0.00 36.74 1.89
2260 2727 7.094592 CCTTCTTTCTAAAATGGTGAGGAAGTC 60.095 40.741 0.00 0.00 29.31 3.01
2265 2732 5.012893 AGCCTTCTTTCTAAAATGGTGAGG 58.987 41.667 0.00 0.00 0.00 3.86
2267 2734 5.880901 AGAGCCTTCTTTCTAAAATGGTGA 58.119 37.500 0.00 0.00 0.00 4.02
2268 2735 6.207417 TCAAGAGCCTTCTTTCTAAAATGGTG 59.793 38.462 0.00 0.00 41.71 4.17
2270 2737 6.824305 TCAAGAGCCTTCTTTCTAAAATGG 57.176 37.500 0.00 0.00 41.71 3.16
2273 2740 6.238759 GCAGTTCAAGAGCCTTCTTTCTAAAA 60.239 38.462 0.00 0.00 41.71 1.52
2277 2744 3.145286 GCAGTTCAAGAGCCTTCTTTCT 58.855 45.455 0.00 0.00 41.71 2.52
2278 2745 2.880890 TGCAGTTCAAGAGCCTTCTTTC 59.119 45.455 0.00 0.00 41.71 2.62
2308 2775 8.155821 TGGTTATCAAATAAAAGAACACGTGA 57.844 30.769 25.01 0.00 0.00 4.35
2309 2776 7.537306 CCTGGTTATCAAATAAAAGAACACGTG 59.463 37.037 15.48 15.48 0.00 4.49
2310 2777 7.229907 ACCTGGTTATCAAATAAAAGAACACGT 59.770 33.333 0.00 0.00 0.00 4.49
2311 2778 7.590279 ACCTGGTTATCAAATAAAAGAACACG 58.410 34.615 0.00 0.00 0.00 4.49
2312 2779 8.573035 TGACCTGGTTATCAAATAAAAGAACAC 58.427 33.333 0.00 0.00 0.00 3.32
2313 2780 8.698973 TGACCTGGTTATCAAATAAAAGAACA 57.301 30.769 0.00 0.00 0.00 3.18
2331 2798 9.740239 CAATATCTTCAACAAAATATGACCTGG 57.260 33.333 0.00 0.00 0.00 4.45
2354 2821 8.137745 ACAATGGAATAAGGAACATGAACAAT 57.862 30.769 0.00 0.00 0.00 2.71
2388 2855 4.393371 GGAACATGACTTCAACTCCTAAGC 59.607 45.833 0.00 0.00 0.00 3.09
2394 2861 3.406764 AGCAGGAACATGACTTCAACTC 58.593 45.455 0.00 0.00 0.00 3.01
2399 2866 8.443953 AAGATTTATAGCAGGAACATGACTTC 57.556 34.615 0.00 0.00 0.00 3.01
2455 2923 3.371917 CCTGGAAGAAATGGCACCATAGA 60.372 47.826 1.81 0.00 32.79 1.98
2456 2924 2.954318 CCTGGAAGAAATGGCACCATAG 59.046 50.000 1.81 0.00 32.79 2.23
2458 2926 1.358787 TCCTGGAAGAAATGGCACCAT 59.641 47.619 0.00 0.00 34.92 3.55
2464 2932 4.226168 AGTTCTACCTCCTGGAAGAAATGG 59.774 45.833 10.16 3.73 34.07 3.16
2509 2977 1.141881 CCCCATCTCGACCTTCACG 59.858 63.158 0.00 0.00 0.00 4.35
2608 3076 3.801698 TGATGTTGCCTTCTCTATCTGC 58.198 45.455 0.00 0.00 0.00 4.26
2707 3175 4.457496 AGTGGCTCGGCATGGTCG 62.457 66.667 0.00 0.00 0.00 4.79
2714 3182 2.202987 CTGGATCAGTGGCTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
2716 3184 1.227205 GCTCTGGATCAGTGGCTCG 60.227 63.158 0.00 0.00 32.48 5.03
2718 3186 1.798626 TATGCTCTGGATCAGTGGCT 58.201 50.000 0.00 5.69 34.60 4.75
2741 3209 1.069358 GGCTAGTGGAGACTGTATGGC 59.931 57.143 0.00 0.00 33.21 4.40
2821 3289 2.364970 CTCCTCCTCTATCTGGCACTTG 59.635 54.545 0.00 0.00 0.00 3.16
2854 3322 1.658686 CCCTCTCACGGGTTCTCTCG 61.659 65.000 0.00 0.00 39.51 4.04
2887 3355 3.430042 TCCAATGCTGAAGCTTTCTCT 57.570 42.857 0.00 0.00 42.66 3.10
2964 3432 3.748048 CCATATGTCATAAGGTTCCAGCG 59.252 47.826 6.02 0.00 0.00 5.18
3010 3478 3.312421 TCTTCCTGTGCTTGTCTTTTTCG 59.688 43.478 0.00 0.00 0.00 3.46
3067 3535 2.618241 TGTGTGCTCAATTGTGGAAGTC 59.382 45.455 5.13 0.00 0.00 3.01
3088 3556 4.707448 TGAAGAGTCTTCGCCTTAGATCTT 59.293 41.667 24.32 0.00 0.00 2.40
3091 3559 4.020543 ACTGAAGAGTCTTCGCCTTAGAT 58.979 43.478 24.32 7.20 0.00 1.98
3180 3648 2.031157 ACGTTGCTTCTTTTTCCCATCG 60.031 45.455 0.00 0.00 0.00 3.84
3191 3659 1.371558 GGTCCTCCACGTTGCTTCT 59.628 57.895 0.00 0.00 0.00 2.85
3217 3685 1.132199 GTGTGACGTCGGATGTAGCG 61.132 60.000 11.62 0.00 0.00 4.26
3225 3693 1.257936 CAACAGAAAGTGTGACGTCGG 59.742 52.381 11.62 0.00 40.26 4.79
3244 3712 2.050144 AGGAGCTTGGAGTGTTCTTCA 58.950 47.619 0.00 0.00 0.00 3.02
3271 3739 1.373570 CAACCTCTGATTCTTCCGCC 58.626 55.000 0.00 0.00 0.00 6.13
3328 3796 2.054453 GCCCTGGTTTGCCTGATCC 61.054 63.158 0.00 0.00 35.96 3.36
3359 3827 0.390472 GCCTCGTCCACTCTTTCCAG 60.390 60.000 0.00 0.00 0.00 3.86
3437 3905 1.535462 GAGCTTAGCTTTGTTTGCGGA 59.465 47.619 8.58 0.00 39.88 5.54
3502 3970 2.649034 GTCGGTCGCCAGTTCAGA 59.351 61.111 0.00 0.00 0.00 3.27
3537 4005 8.787852 AGGTCTTGAACTTCACAGAATTATTTC 58.212 33.333 0.00 0.00 0.00 2.17
3538 4006 8.697507 AGGTCTTGAACTTCACAGAATTATTT 57.302 30.769 0.00 0.00 0.00 1.40
3542 4010 4.752101 CGAGGTCTTGAACTTCACAGAATT 59.248 41.667 0.00 0.00 33.70 2.17
3543 4011 4.310769 CGAGGTCTTGAACTTCACAGAAT 58.689 43.478 0.00 0.00 33.70 2.40
3544 4012 3.492656 CCGAGGTCTTGAACTTCACAGAA 60.493 47.826 0.00 0.00 33.70 3.02
3545 4013 2.035961 CCGAGGTCTTGAACTTCACAGA 59.964 50.000 0.00 0.00 33.70 3.41
3586 4054 3.264845 ATCCCCGTGCCCACCTTT 61.265 61.111 0.00 0.00 0.00 3.11
3591 4059 3.151710 CGTAGATCCCCGTGCCCA 61.152 66.667 0.00 0.00 0.00 5.36
3658 4129 0.604780 GGATCTGCCCGATGGACATG 60.605 60.000 0.00 0.00 30.84 3.21
3703 4174 0.471780 TCTTCCCAGTGGCAGTCTCA 60.472 55.000 2.61 0.00 0.00 3.27
3715 4186 3.087031 CGTCTTACCAGTAGTCTTCCCA 58.913 50.000 0.00 0.00 0.00 4.37
3742 4216 1.971357 ACCTCCTTCTTCTTCGCTGAA 59.029 47.619 0.00 0.00 0.00 3.02
3746 4220 1.273886 AGACACCTCCTTCTTCTTCGC 59.726 52.381 0.00 0.00 0.00 4.70
3758 4232 0.980231 ATCTGCCCCAGAGACACCTC 60.980 60.000 1.20 0.00 44.08 3.85
3781 4255 2.949451 ACATCTCGTACTTCTGGCTG 57.051 50.000 0.00 0.00 0.00 4.85
3817 4291 1.301244 GGACGCGCCATCATGATCT 60.301 57.895 5.73 0.00 36.34 2.75
3959 4436 9.953697 GTCTGGAAAGATACTAACTACACTATG 57.046 37.037 0.00 0.00 0.00 2.23
3960 4437 9.134055 GGTCTGGAAAGATACTAACTACACTAT 57.866 37.037 0.00 0.00 0.00 2.12
3970 4447 6.893583 AGTACTACGGTCTGGAAAGATACTA 58.106 40.000 0.00 0.00 0.00 1.82
3971 4448 5.753716 AGTACTACGGTCTGGAAAGATACT 58.246 41.667 0.00 0.00 0.00 2.12
3972 4449 6.448207 AAGTACTACGGTCTGGAAAGATAC 57.552 41.667 0.00 0.00 0.00 2.24
3998 4481 4.273969 TCCGGTTGTAAAAACACAGCTTAG 59.726 41.667 0.00 0.00 31.06 2.18
4042 4532 1.202952 TCCGGTTGTAAATTGTGGGCT 60.203 47.619 0.00 0.00 0.00 5.19
4180 4670 1.353358 TCAGTGAGTCCCGGTAGAGAA 59.647 52.381 0.00 0.00 0.00 2.87
4186 4676 2.283966 CCCTCAGTGAGTCCCGGT 60.284 66.667 18.74 0.00 0.00 5.28
4204 4694 4.499696 GGGATCGGTTAGAAATGCCAAATG 60.500 45.833 0.00 0.00 31.72 2.32
4205 4695 3.636764 GGGATCGGTTAGAAATGCCAAAT 59.363 43.478 0.00 0.00 31.72 2.32
4206 4696 3.020984 GGGATCGGTTAGAAATGCCAAA 58.979 45.455 0.00 0.00 31.72 3.28
4207 4697 2.025793 TGGGATCGGTTAGAAATGCCAA 60.026 45.455 0.00 0.00 37.87 4.52
4208 4698 1.562008 TGGGATCGGTTAGAAATGCCA 59.438 47.619 0.00 0.00 38.41 4.92
4209 4699 2.341846 TGGGATCGGTTAGAAATGCC 57.658 50.000 0.00 0.00 0.00 4.40
4210 4700 5.278315 GGTTATTGGGATCGGTTAGAAATGC 60.278 44.000 0.00 0.00 0.00 3.56
4211 4701 5.049680 CGGTTATTGGGATCGGTTAGAAATG 60.050 44.000 0.00 0.00 0.00 2.32
4235 4725 2.568956 ACCGGGTTTTACTCCTCTAACC 59.431 50.000 6.32 0.00 39.41 2.85
4236 4726 3.969287 ACCGGGTTTTACTCCTCTAAC 57.031 47.619 6.32 0.00 0.00 2.34
4242 4732 4.220602 TCTGTACTAACCGGGTTTTACTCC 59.779 45.833 19.02 2.74 0.00 3.85
4243 4733 5.391312 TCTGTACTAACCGGGTTTTACTC 57.609 43.478 19.02 6.33 0.00 2.59
4245 4735 8.546597 TTTATTCTGTACTAACCGGGTTTTAC 57.453 34.615 19.02 18.38 0.00 2.01
4258 4748 7.934120 GTGGCTGAGGATAATTTATTCTGTACT 59.066 37.037 1.76 0.00 0.00 2.73
4259 4749 7.715249 TGTGGCTGAGGATAATTTATTCTGTAC 59.285 37.037 1.76 0.00 0.00 2.90
4260 4750 7.715249 GTGTGGCTGAGGATAATTTATTCTGTA 59.285 37.037 1.76 0.00 0.00 2.74
4261 4751 6.543831 GTGTGGCTGAGGATAATTTATTCTGT 59.456 38.462 1.76 0.00 0.00 3.41
4262 4752 6.016777 GGTGTGGCTGAGGATAATTTATTCTG 60.017 42.308 1.76 0.00 0.00 3.02
4294 4826 3.613432 CGACGGTGGAGTAAATATAGGGC 60.613 52.174 0.00 0.00 0.00 5.19
4348 4881 1.007842 GGGAGGAGAAGAGGAAGAGGT 59.992 57.143 0.00 0.00 0.00 3.85
4382 4915 3.319198 GGTTGGGAGGAGTCGCCA 61.319 66.667 0.00 0.00 40.02 5.69
4399 4932 1.527370 GATGGAGAAAGACCCGGGG 59.473 63.158 27.92 12.73 0.00 5.73
4400 4933 1.144057 CGATGGAGAAAGACCCGGG 59.856 63.158 22.25 22.25 0.00 5.73
4401 4934 1.521681 GCGATGGAGAAAGACCCGG 60.522 63.158 0.00 0.00 0.00 5.73
4403 4936 0.462759 CTGGCGATGGAGAAAGACCC 60.463 60.000 0.00 0.00 0.00 4.46
4404 4937 1.092345 GCTGGCGATGGAGAAAGACC 61.092 60.000 0.00 0.00 0.00 3.85
4405 4938 1.424493 CGCTGGCGATGGAGAAAGAC 61.424 60.000 9.51 0.00 42.83 3.01
4406 4939 1.153568 CGCTGGCGATGGAGAAAGA 60.154 57.895 9.51 0.00 42.83 2.52
4407 4940 2.817423 GCGCTGGCGATGGAGAAAG 61.817 63.158 19.31 0.00 42.83 2.62
4408 4941 2.819595 GCGCTGGCGATGGAGAAA 60.820 61.111 19.31 0.00 42.83 2.52
4409 4942 3.723235 GAGCGCTGGCGATGGAGAA 62.723 63.158 18.48 0.00 46.35 2.87
4410 4943 4.212913 GAGCGCTGGCGATGGAGA 62.213 66.667 18.48 0.00 46.35 3.71
4429 4985 1.374125 CGCTGTGGATCAACGGTGA 60.374 57.895 16.45 5.17 38.91 4.02
4431 4987 1.667830 CACGCTGTGGATCAACGGT 60.668 57.895 10.84 0.00 39.56 4.83
4470 5026 1.959226 GCCGCTTGAAGACGAACCA 60.959 57.895 9.86 0.00 0.00 3.67
4664 5220 1.520787 GCCGTGTAGAATGACCCGG 60.521 63.158 0.00 0.00 38.45 5.73
4675 5231 3.807538 GACGAGCTCCGCCGTGTA 61.808 66.667 8.47 0.00 43.32 2.90
4742 5299 3.562635 CCAAACGGGAAGTCGAGC 58.437 61.111 0.00 0.00 40.01 5.03
4788 5346 2.280592 GGTCACCACACCCGACAC 60.281 66.667 0.00 0.00 0.00 3.67
4789 5347 2.445085 AGGTCACCACACCCGACA 60.445 61.111 0.00 0.00 37.09 4.35
4791 5349 3.299977 CGAGGTCACCACACCCGA 61.300 66.667 0.00 0.00 37.09 5.14
4810 5368 2.764128 GGTCCTCCCGAGCCATCA 60.764 66.667 0.00 0.00 32.53 3.07
4865 5423 2.481441 AGGTCTGCCATGTATTCCTCA 58.519 47.619 0.00 0.00 37.19 3.86
4915 5473 2.989639 CGAAGATGGCCCACTCCA 59.010 61.111 0.00 0.00 40.97 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.