Multiple sequence alignment - TraesCS1A01G296400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G296400 chr1A 100.000 2687 0 0 1 2687 491156802 491154116 0.000000e+00 4963.0
1 TraesCS1A01G296400 chr1A 92.411 224 16 1 2349 2572 28408894 28408672 4.320000e-83 318.0
2 TraesCS1A01G296400 chr1A 90.244 123 12 0 2560 2682 20602247 20602125 7.700000e-36 161.0
3 TraesCS1A01G296400 chr1A 92.500 80 6 0 2604 2683 20983041 20983120 6.080000e-22 115.0
4 TraesCS1A01G296400 chr5D 96.187 813 31 0 21 833 120419045 120418233 0.000000e+00 1330.0
5 TraesCS1A01G296400 chr5D 96.069 814 30 2 21 833 43918876 43919688 0.000000e+00 1325.0
6 TraesCS1A01G296400 chr5D 95.941 813 32 1 21 833 208104245 208103434 0.000000e+00 1317.0
7 TraesCS1A01G296400 chr5D 90.833 120 11 0 2564 2683 92912572 92912691 7.700000e-36 161.0
8 TraesCS1A01G296400 chr2D 96.192 814 28 3 21 833 337911167 337911978 0.000000e+00 1328.0
9 TraesCS1A01G296400 chr2D 87.734 856 96 3 1365 2214 485039841 485040693 0.000000e+00 990.0
10 TraesCS1A01G296400 chr2D 92.727 220 16 0 2348 2567 460298816 460299035 4.320000e-83 318.0
11 TraesCS1A01G296400 chr2D 72.642 742 156 36 1490 2216 247826797 247826088 4.540000e-48 202.0
12 TraesCS1A01G296400 chr2D 92.248 129 9 1 2556 2683 156598416 156598544 5.910000e-42 182.0
13 TraesCS1A01G296400 chr2D 89.922 129 12 1 2556 2683 22500520 22500648 5.950000e-37 165.0
14 TraesCS1A01G296400 chr2D 88.182 110 12 1 2268 2377 6194798 6194906 2.170000e-26 130.0
15 TraesCS1A01G296400 chr7D 96.187 813 28 3 22 833 592067326 592068136 0.000000e+00 1327.0
16 TraesCS1A01G296400 chr7D 92.000 125 9 1 2559 2683 475875411 475875534 9.890000e-40 174.0
17 TraesCS1A01G296400 chr7D 92.000 125 9 1 2559 2683 508420146 508420269 9.890000e-40 174.0
18 TraesCS1A01G296400 chr4D 95.631 824 35 1 21 844 95758177 95757355 0.000000e+00 1321.0
19 TraesCS1A01G296400 chr4D 75.039 641 109 35 1459 2083 12186173 12186778 1.600000e-62 250.0
20 TraesCS1A01G296400 chr4D 91.200 125 10 1 2559 2683 298846962 298846839 4.600000e-38 169.0
21 TraesCS1A01G296400 chr4D 88.372 129 13 2 2556 2683 7467486 7467359 1.290000e-33 154.0
22 TraesCS1A01G296400 chr4D 89.167 120 13 0 2564 2683 354049310 354049191 1.670000e-32 150.0
23 TraesCS1A01G296400 chr4D 83.824 136 9 4 2559 2683 329463404 329463537 1.690000e-22 117.0
24 TraesCS1A01G296400 chr4D 83.582 134 11 2 2560 2683 314583962 314583830 6.080000e-22 115.0
25 TraesCS1A01G296400 chr4D 82.836 134 13 1 2559 2682 480816242 480816375 7.860000e-21 111.0
26 TraesCS1A01G296400 chr6D 95.951 815 30 3 21 833 363915138 363915951 0.000000e+00 1319.0
27 TraesCS1A01G296400 chr6D 95.936 812 33 0 21 832 227346410 227345599 0.000000e+00 1317.0
28 TraesCS1A01G296400 chr6D 95.946 814 30 3 21 833 308989443 308988632 0.000000e+00 1317.0
29 TraesCS1A01G296400 chr6D 83.733 1002 140 17 1225 2214 125402103 125401113 0.000000e+00 926.0
30 TraesCS1A01G296400 chr6D 90.698 129 11 1 2556 2683 350262043 350262171 1.280000e-38 171.0
31 TraesCS1A01G296400 chr6D 89.600 125 12 1 2559 2683 411220827 411220950 9.960000e-35 158.0
32 TraesCS1A01G296400 chr6D 88.095 84 9 1 2559 2642 224427113 224427031 6.120000e-17 99.0
33 TraesCS1A01G296400 chr6D 81.343 134 14 2 2559 2682 364234388 364234256 6.120000e-17 99.0
34 TraesCS1A01G296400 chr6B 84.458 1274 152 24 982 2212 692329620 692330890 0.000000e+00 1214.0
35 TraesCS1A01G296400 chr6B 90.987 233 18 3 2335 2567 623382230 623382001 7.220000e-81 311.0
36 TraesCS1A01G296400 chr6B 91.860 86 7 0 2268 2353 279083737 279083652 1.310000e-23 121.0
37 TraesCS1A01G296400 chr3B 85.731 848 102 8 1377 2213 728217431 728216592 0.000000e+00 878.0
38 TraesCS1A01G296400 chr3B 83.518 631 85 12 1588 2214 593165754 593165139 3.000000e-159 571.0
39 TraesCS1A01G296400 chr3B 85.535 318 43 3 2286 2602 29755708 29755393 1.990000e-86 329.0
40 TraesCS1A01G296400 chr3B 89.691 97 8 2 2254 2350 72598850 72598944 3.630000e-24 122.0
41 TraesCS1A01G296400 chr3B 78.199 211 31 10 1624 1833 203547529 203547333 1.310000e-23 121.0
42 TraesCS1A01G296400 chr3B 91.667 84 7 0 2268 2351 777089959 777090042 1.690000e-22 117.0
43 TraesCS1A01G296400 chr3D 84.300 879 118 10 1338 2201 595229699 595228826 0.000000e+00 841.0
44 TraesCS1A01G296400 chr3D 85.489 634 76 11 1588 2213 451712034 451711409 0.000000e+00 647.0
45 TraesCS1A01G296400 chr3D 89.600 125 12 1 2559 2683 6301433 6301310 9.960000e-35 158.0
46 TraesCS1A01G296400 chr3D 89.600 125 9 3 2559 2683 135588634 135588514 3.580000e-34 156.0
47 TraesCS1A01G296400 chr3D 88.889 126 12 2 2559 2683 357965300 357965176 1.290000e-33 154.0
48 TraesCS1A01G296400 chr3D 90.123 81 8 0 2260 2340 500140059 500140139 3.660000e-19 106.0
49 TraesCS1A01G296400 chr2B 93.213 221 15 0 2347 2567 418970321 418970541 2.580000e-85 326.0
50 TraesCS1A01G296400 chr2B 74.103 641 116 32 1459 2083 531162077 531162683 4.500000e-53 219.0
51 TraesCS1A01G296400 chr2B 91.200 125 10 1 2559 2683 574077967 574078090 4.600000e-38 169.0
52 TraesCS1A01G296400 chr2B 89.691 97 8 2 2254 2350 668754602 668754696 3.630000e-24 122.0
53 TraesCS1A01G296400 chr2B 84.821 112 17 0 2266 2377 594061285 594061396 2.190000e-21 113.0
54 TraesCS1A01G296400 chr5B 92.478 226 16 1 2347 2572 461566848 461566624 3.340000e-84 322.0
55 TraesCS1A01G296400 chr5B 92.727 220 16 0 2348 2567 474043395 474043176 4.320000e-83 318.0
56 TraesCS1A01G296400 chr5B 91.129 124 10 1 2560 2683 477556179 477556301 1.650000e-37 167.0
57 TraesCS1A01G296400 chr2A 92.793 222 16 0 2346 2567 258346968 258346747 3.340000e-84 322.0
58 TraesCS1A01G296400 chr2A 82.759 116 13 7 2101 2213 744913367 744913478 2.200000e-16 97.1
59 TraesCS1A01G296400 chr3A 92.760 221 16 0 2347 2567 535225521 535225741 1.200000e-83 320.0
60 TraesCS1A01G296400 chr5A 90.625 128 11 1 2556 2683 295057949 295058075 4.600000e-38 169.0
61 TraesCS1A01G296400 chr7B 90.400 125 11 1 2559 2683 394068705 394068828 2.140000e-36 163.0
62 TraesCS1A01G296400 chr7B 95.775 71 3 0 2265 2335 44789076 44789146 6.080000e-22 115.0
63 TraesCS1A01G296400 chr7B 97.561 41 0 1 2118 2158 243286435 243286474 4.800000e-08 69.4
64 TraesCS1A01G296400 chr1D 89.147 129 13 1 2556 2683 356179239 356179111 2.770000e-35 159.0
65 TraesCS1A01G296400 chr1D 87.500 128 16 0 2556 2683 468312328 468312455 5.990000e-32 148.0
66 TraesCS1A01G296400 chr1D 85.714 70 9 1 886 954 394251487 394251556 3.710000e-09 73.1
67 TraesCS1A01G296400 chr4B 88.800 125 12 2 2559 2683 449525537 449525659 4.630000e-33 152.0
68 TraesCS1A01G296400 chr6A 87.597 129 15 1 2556 2683 555773572 555773444 5.990000e-32 148.0
69 TraesCS1A01G296400 chr1B 95.181 83 4 0 2268 2350 336126612 336126530 6.040000e-27 132.0
70 TraesCS1A01G296400 chr1B 95.181 83 4 0 2268 2350 396913373 396913455 6.040000e-27 132.0
71 TraesCS1A01G296400 chr1B 89.691 97 8 2 2254 2350 506074667 506074761 3.630000e-24 122.0
72 TraesCS1A01G296400 chr1B 84.821 112 17 0 2266 2377 496876137 496876026 2.190000e-21 113.0
73 TraesCS1A01G296400 chr1B 93.103 58 2 2 837 894 527852952 527852897 1.710000e-12 84.2
74 TraesCS1A01G296400 chr7A 91.765 85 5 1 2268 2350 449562903 449562987 1.690000e-22 117.0
75 TraesCS1A01G296400 chr7A 87.273 55 3 4 807 860 585277264 585277213 2.890000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G296400 chr1A 491154116 491156802 2686 True 4963 4963 100.000 1 2687 1 chr1A.!!$R3 2686
1 TraesCS1A01G296400 chr5D 120418233 120419045 812 True 1330 1330 96.187 21 833 1 chr5D.!!$R1 812
2 TraesCS1A01G296400 chr5D 43918876 43919688 812 False 1325 1325 96.069 21 833 1 chr5D.!!$F1 812
3 TraesCS1A01G296400 chr5D 208103434 208104245 811 True 1317 1317 95.941 21 833 1 chr5D.!!$R2 812
4 TraesCS1A01G296400 chr2D 337911167 337911978 811 False 1328 1328 96.192 21 833 1 chr2D.!!$F4 812
5 TraesCS1A01G296400 chr2D 485039841 485040693 852 False 990 990 87.734 1365 2214 1 chr2D.!!$F6 849
6 TraesCS1A01G296400 chr2D 247826088 247826797 709 True 202 202 72.642 1490 2216 1 chr2D.!!$R1 726
7 TraesCS1A01G296400 chr7D 592067326 592068136 810 False 1327 1327 96.187 22 833 1 chr7D.!!$F3 811
8 TraesCS1A01G296400 chr4D 95757355 95758177 822 True 1321 1321 95.631 21 844 1 chr4D.!!$R2 823
9 TraesCS1A01G296400 chr4D 12186173 12186778 605 False 250 250 75.039 1459 2083 1 chr4D.!!$F1 624
10 TraesCS1A01G296400 chr6D 363915138 363915951 813 False 1319 1319 95.951 21 833 1 chr6D.!!$F2 812
11 TraesCS1A01G296400 chr6D 227345599 227346410 811 True 1317 1317 95.936 21 832 1 chr6D.!!$R3 811
12 TraesCS1A01G296400 chr6D 308988632 308989443 811 True 1317 1317 95.946 21 833 1 chr6D.!!$R4 812
13 TraesCS1A01G296400 chr6D 125401113 125402103 990 True 926 926 83.733 1225 2214 1 chr6D.!!$R1 989
14 TraesCS1A01G296400 chr6B 692329620 692330890 1270 False 1214 1214 84.458 982 2212 1 chr6B.!!$F1 1230
15 TraesCS1A01G296400 chr3B 728216592 728217431 839 True 878 878 85.731 1377 2213 1 chr3B.!!$R4 836
16 TraesCS1A01G296400 chr3B 593165139 593165754 615 True 571 571 83.518 1588 2214 1 chr3B.!!$R3 626
17 TraesCS1A01G296400 chr3D 595228826 595229699 873 True 841 841 84.300 1338 2201 1 chr3D.!!$R5 863
18 TraesCS1A01G296400 chr3D 451711409 451712034 625 True 647 647 85.489 1588 2213 1 chr3D.!!$R4 625
19 TraesCS1A01G296400 chr2B 531162077 531162683 606 False 219 219 74.103 1459 2083 1 chr2B.!!$F2 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
972 975 0.104725 AGATGTGGATCTCCCCCTCC 60.105 60.0 0.0 0.0 33.2 4.3 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2251 2337 0.028505 GTCTTATACCGTCGCGCTGA 59.971 55.0 5.56 1.08 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
175 176 3.055747 TGTCATCGGTATGTTACTTGCCA 60.056 43.478 6.24 0.00 34.50 4.92
231 232 1.825090 TCTCGTTACCGGCAAGTCTA 58.175 50.000 0.00 0.00 33.95 2.59
373 375 8.300286 GTGACAAATCCTAATCTCGATCTATGA 58.700 37.037 0.00 0.00 0.00 2.15
378 380 6.576662 TCCTAATCTCGATCTATGACAACC 57.423 41.667 0.00 0.00 0.00 3.77
379 381 6.307776 TCCTAATCTCGATCTATGACAACCT 58.692 40.000 0.00 0.00 0.00 3.50
590 592 4.264253 TGGGTCAAGTCAATCACATCATC 58.736 43.478 0.00 0.00 0.00 2.92
684 687 3.353370 ACGAGCTAGTCAAGTAGAGGT 57.647 47.619 0.00 0.00 0.00 3.85
833 836 5.511386 CCTCTAGGGCATATTTCCTTCAT 57.489 43.478 0.00 0.00 34.75 2.57
834 837 6.627087 CCTCTAGGGCATATTTCCTTCATA 57.373 41.667 0.00 0.00 34.75 2.15
835 838 6.410540 CCTCTAGGGCATATTTCCTTCATAC 58.589 44.000 0.00 0.00 34.75 2.39
836 839 6.013379 CCTCTAGGGCATATTTCCTTCATACA 60.013 42.308 0.00 0.00 34.75 2.29
837 840 7.387265 TCTAGGGCATATTTCCTTCATACAA 57.613 36.000 0.00 0.00 34.75 2.41
838 841 7.811282 TCTAGGGCATATTTCCTTCATACAAA 58.189 34.615 0.00 0.00 34.75 2.83
839 842 8.278639 TCTAGGGCATATTTCCTTCATACAAAA 58.721 33.333 0.00 0.00 34.75 2.44
840 843 7.112452 AGGGCATATTTCCTTCATACAAAAC 57.888 36.000 0.00 0.00 0.00 2.43
841 844 6.667414 AGGGCATATTTCCTTCATACAAAACA 59.333 34.615 0.00 0.00 0.00 2.83
842 845 7.345392 AGGGCATATTTCCTTCATACAAAACAT 59.655 33.333 0.00 0.00 0.00 2.71
843 846 7.439056 GGGCATATTTCCTTCATACAAAACATG 59.561 37.037 0.00 0.00 0.00 3.21
844 847 7.439056 GGCATATTTCCTTCATACAAAACATGG 59.561 37.037 0.00 0.00 0.00 3.66
845 848 7.439056 GCATATTTCCTTCATACAAAACATGGG 59.561 37.037 0.00 0.00 0.00 4.00
846 849 4.799564 TTCCTTCATACAAAACATGGGC 57.200 40.909 0.00 0.00 0.00 5.36
847 850 3.772387 TCCTTCATACAAAACATGGGCA 58.228 40.909 0.00 0.00 0.00 5.36
848 851 3.509575 TCCTTCATACAAAACATGGGCAC 59.490 43.478 0.00 0.00 0.00 5.01
849 852 3.257873 CCTTCATACAAAACATGGGCACA 59.742 43.478 0.00 0.00 0.00 4.57
850 853 4.081531 CCTTCATACAAAACATGGGCACAT 60.082 41.667 0.00 0.00 37.99 3.21
851 854 5.480642 TTCATACAAAACATGGGCACATT 57.519 34.783 0.00 0.00 34.35 2.71
852 855 5.480642 TCATACAAAACATGGGCACATTT 57.519 34.783 0.00 0.00 34.35 2.32
853 856 6.596309 TCATACAAAACATGGGCACATTTA 57.404 33.333 0.00 0.00 34.35 1.40
854 857 6.393990 TCATACAAAACATGGGCACATTTAC 58.606 36.000 0.00 0.00 34.35 2.01
855 858 4.953940 ACAAAACATGGGCACATTTACT 57.046 36.364 0.00 0.00 34.35 2.24
856 859 7.394641 TCATACAAAACATGGGCACATTTACTA 59.605 33.333 0.00 0.00 34.35 1.82
857 860 6.024552 ACAAAACATGGGCACATTTACTAG 57.975 37.500 0.00 0.00 34.35 2.57
858 861 4.718940 AAACATGGGCACATTTACTAGC 57.281 40.909 0.00 0.00 34.35 3.42
859 862 3.364460 ACATGGGCACATTTACTAGCA 57.636 42.857 0.00 0.00 34.35 3.49
860 863 3.696045 ACATGGGCACATTTACTAGCAA 58.304 40.909 0.00 0.00 34.35 3.91
861 864 3.443681 ACATGGGCACATTTACTAGCAAC 59.556 43.478 0.00 0.00 34.35 4.17
862 865 3.147553 TGGGCACATTTACTAGCAACA 57.852 42.857 0.00 0.00 0.00 3.33
863 866 3.696045 TGGGCACATTTACTAGCAACAT 58.304 40.909 0.00 0.00 0.00 2.71
864 867 4.849518 TGGGCACATTTACTAGCAACATA 58.150 39.130 0.00 0.00 0.00 2.29
865 868 5.257262 TGGGCACATTTACTAGCAACATAA 58.743 37.500 0.00 0.00 0.00 1.90
866 869 5.712446 TGGGCACATTTACTAGCAACATAAA 59.288 36.000 0.00 0.00 0.00 1.40
867 870 6.209589 TGGGCACATTTACTAGCAACATAAAA 59.790 34.615 0.00 0.00 0.00 1.52
868 871 7.093992 GGGCACATTTACTAGCAACATAAAAA 58.906 34.615 0.00 0.00 0.00 1.94
869 872 7.062956 GGGCACATTTACTAGCAACATAAAAAC 59.937 37.037 0.00 0.00 0.00 2.43
870 873 7.596995 GGCACATTTACTAGCAACATAAAAACA 59.403 33.333 0.00 0.00 0.00 2.83
871 874 8.424731 GCACATTTACTAGCAACATAAAAACAC 58.575 33.333 0.00 0.00 0.00 3.32
872 875 9.457110 CACATTTACTAGCAACATAAAAACACA 57.543 29.630 0.00 0.00 0.00 3.72
873 876 9.458374 ACATTTACTAGCAACATAAAAACACAC 57.542 29.630 0.00 0.00 0.00 3.82
874 877 9.457110 CATTTACTAGCAACATAAAAACACACA 57.543 29.630 0.00 0.00 0.00 3.72
876 879 9.856488 TTTACTAGCAACATAAAAACACACAAA 57.144 25.926 0.00 0.00 0.00 2.83
913 916 8.295288 ACTAATATCCACGTGTTAGTATACTGC 58.705 37.037 21.22 8.73 36.06 4.40
914 917 3.788333 TCCACGTGTTAGTATACTGCC 57.212 47.619 15.90 6.20 0.00 4.85
915 918 3.359033 TCCACGTGTTAGTATACTGCCT 58.641 45.455 15.90 0.00 0.00 4.75
916 919 3.129813 TCCACGTGTTAGTATACTGCCTG 59.870 47.826 15.90 4.33 0.00 4.85
917 920 3.129813 CCACGTGTTAGTATACTGCCTGA 59.870 47.826 15.90 0.00 0.00 3.86
918 921 4.202121 CCACGTGTTAGTATACTGCCTGAT 60.202 45.833 15.90 0.00 0.00 2.90
919 922 5.009310 CCACGTGTTAGTATACTGCCTGATA 59.991 44.000 15.90 0.00 0.00 2.15
920 923 6.294564 CCACGTGTTAGTATACTGCCTGATAT 60.295 42.308 15.90 0.00 0.00 1.63
921 924 7.145985 CACGTGTTAGTATACTGCCTGATATT 58.854 38.462 15.90 0.00 0.00 1.28
922 925 7.326305 CACGTGTTAGTATACTGCCTGATATTC 59.674 40.741 15.90 0.00 0.00 1.75
923 926 7.013942 ACGTGTTAGTATACTGCCTGATATTCA 59.986 37.037 15.90 0.00 0.00 2.57
924 927 7.326305 CGTGTTAGTATACTGCCTGATATTCAC 59.674 40.741 15.90 5.76 0.00 3.18
925 928 7.326305 GTGTTAGTATACTGCCTGATATTCACG 59.674 40.741 15.90 0.00 0.00 4.35
926 929 7.013942 TGTTAGTATACTGCCTGATATTCACGT 59.986 37.037 15.90 0.00 0.00 4.49
927 930 8.509690 GTTAGTATACTGCCTGATATTCACGTA 58.490 37.037 15.90 0.00 0.00 3.57
928 931 6.910995 AGTATACTGCCTGATATTCACGTAC 58.089 40.000 4.10 0.00 0.00 3.67
929 932 3.079960 ACTGCCTGATATTCACGTACG 57.920 47.619 15.01 15.01 0.00 3.67
930 933 1.787155 CTGCCTGATATTCACGTACGC 59.213 52.381 16.72 0.00 0.00 4.42
931 934 1.135333 TGCCTGATATTCACGTACGCA 59.865 47.619 16.72 2.03 0.00 5.24
932 935 2.223947 TGCCTGATATTCACGTACGCAT 60.224 45.455 16.72 7.79 0.00 4.73
933 936 2.800544 GCCTGATATTCACGTACGCATT 59.199 45.455 16.72 1.37 0.00 3.56
934 937 3.247648 GCCTGATATTCACGTACGCATTT 59.752 43.478 16.72 0.21 0.00 2.32
935 938 4.446385 GCCTGATATTCACGTACGCATTTA 59.554 41.667 16.72 3.10 0.00 1.40
936 939 5.611844 GCCTGATATTCACGTACGCATTTAC 60.612 44.000 16.72 2.69 0.00 2.01
937 940 5.690409 CCTGATATTCACGTACGCATTTACT 59.310 40.000 16.72 0.00 0.00 2.24
938 941 6.859508 CCTGATATTCACGTACGCATTTACTA 59.140 38.462 16.72 0.00 0.00 1.82
939 942 7.060748 CCTGATATTCACGTACGCATTTACTAG 59.939 40.741 16.72 6.17 0.00 2.57
940 943 7.420002 TGATATTCACGTACGCATTTACTAGT 58.580 34.615 16.72 0.00 0.00 2.57
941 944 5.944049 ATTCACGTACGCATTTACTAGTG 57.056 39.130 16.72 1.78 0.00 2.74
942 945 4.424061 TCACGTACGCATTTACTAGTGT 57.576 40.909 16.72 0.00 0.00 3.55
943 946 4.797471 TCACGTACGCATTTACTAGTGTT 58.203 39.130 16.72 0.00 0.00 3.32
944 947 5.221880 TCACGTACGCATTTACTAGTGTTT 58.778 37.500 16.72 0.00 0.00 2.83
945 948 5.691305 TCACGTACGCATTTACTAGTGTTTT 59.309 36.000 16.72 0.00 0.00 2.43
946 949 5.781717 CACGTACGCATTTACTAGTGTTTTG 59.218 40.000 16.72 0.00 0.00 2.44
947 950 5.691305 ACGTACGCATTTACTAGTGTTTTGA 59.309 36.000 16.72 0.00 0.00 2.69
948 951 6.200665 ACGTACGCATTTACTAGTGTTTTGAA 59.799 34.615 16.72 0.00 0.00 2.69
949 952 7.064674 CGTACGCATTTACTAGTGTTTTGAAA 58.935 34.615 5.39 0.00 0.00 2.69
950 953 7.583401 CGTACGCATTTACTAGTGTTTTGAAAA 59.417 33.333 5.39 0.00 0.00 2.29
951 954 9.224058 GTACGCATTTACTAGTGTTTTGAAAAA 57.776 29.630 5.39 0.00 0.00 1.94
969 972 3.388552 AAAAAGATGTGGATCTCCCCC 57.611 47.619 0.00 0.00 38.03 5.40
970 973 2.293598 AAAGATGTGGATCTCCCCCT 57.706 50.000 0.00 0.00 38.03 4.79
971 974 1.813102 AAGATGTGGATCTCCCCCTC 58.187 55.000 0.00 0.00 38.03 4.30
972 975 0.104725 AGATGTGGATCTCCCCCTCC 60.105 60.000 0.00 0.00 33.20 4.30
973 976 1.073397 ATGTGGATCTCCCCCTCCC 60.073 63.158 0.00 0.00 34.29 4.30
974 977 2.448736 GTGGATCTCCCCCTCCCC 60.449 72.222 0.00 0.00 34.29 4.81
975 978 2.628465 TGGATCTCCCCCTCCCCT 60.628 66.667 0.00 0.00 34.29 4.79
976 979 2.205749 GGATCTCCCCCTCCCCTC 59.794 72.222 0.00 0.00 0.00 4.30
977 980 2.727071 GGATCTCCCCCTCCCCTCA 61.727 68.421 0.00 0.00 0.00 3.86
978 981 1.460497 GATCTCCCCCTCCCCTCAC 60.460 68.421 0.00 0.00 0.00 3.51
979 982 2.974435 GATCTCCCCCTCCCCTCACC 62.974 70.000 0.00 0.00 0.00 4.02
980 983 4.825679 CTCCCCCTCCCCTCACCC 62.826 77.778 0.00 0.00 0.00 4.61
1132 1161 2.972505 GTGTGGTGGTGCTGGTCG 60.973 66.667 0.00 0.00 0.00 4.79
1136 1165 2.262915 GGTGGTGCTGGTCGAGAG 59.737 66.667 0.00 0.00 0.00 3.20
1156 1185 3.319198 GCGGGGGAGGAGTTGTGA 61.319 66.667 0.00 0.00 0.00 3.58
1161 1190 0.257039 GGGGAGGAGTTGTGATGCAT 59.743 55.000 0.00 0.00 0.00 3.96
1162 1191 1.490490 GGGGAGGAGTTGTGATGCATA 59.510 52.381 0.00 0.00 0.00 3.14
1164 1193 2.945668 GGGAGGAGTTGTGATGCATAAC 59.054 50.000 7.30 7.30 36.07 1.89
1248 1277 3.838271 GAGATCTGGTGGCGGCGA 61.838 66.667 12.98 0.00 0.00 5.54
1261 1290 2.592861 GGCGACCCATGCTGATCC 60.593 66.667 0.00 0.00 0.00 3.36
1263 1292 2.814604 CGACCCATGCTGATCCGA 59.185 61.111 0.00 0.00 0.00 4.55
1273 1313 1.288439 CTGATCCGAGCCCGATCTG 59.712 63.158 0.00 0.00 38.22 2.90
1286 1326 1.000396 GATCTGGGCTTTGTGGGCT 60.000 57.895 0.00 0.00 0.00 5.19
1287 1327 1.304713 ATCTGGGCTTTGTGGGCTG 60.305 57.895 0.00 0.00 0.00 4.85
1291 1331 3.741476 GGCTTTGTGGGCTGCTCG 61.741 66.667 0.00 0.00 0.00 5.03
1372 1412 1.001760 GGTGGAGGACCCTCTGCTA 59.998 63.158 15.03 0.00 42.38 3.49
1412 1452 3.604629 GAGGCAGTGGTCTCGCTA 58.395 61.111 0.00 0.00 35.78 4.26
1443 1483 1.112916 TGGAAGACGGTGTGCTCTCA 61.113 55.000 0.00 0.00 0.00 3.27
1461 1501 2.360600 GCCATGCGGGTGTTGGTA 60.361 61.111 0.00 0.00 39.65 3.25
1494 1536 0.172578 CGGCTACAACGATGAGGTGA 59.827 55.000 0.00 0.00 40.93 4.02
1685 1736 3.356290 GCATCTTCCTTGCTTTCCCTTA 58.644 45.455 0.00 0.00 37.14 2.69
1743 1794 4.155733 TTGGATCGGCGCGATGGT 62.156 61.111 12.10 0.00 47.00 3.55
1797 1849 4.740934 GCATCATGTTAGGAGACACTACCC 60.741 50.000 0.00 0.00 31.30 3.69
1881 1935 3.902162 TACGTCGTTGCCGGTGAGC 62.902 63.158 1.78 0.00 33.95 4.26
1908 1964 0.882927 CGTGCTTTCCTTGGACCGAA 60.883 55.000 0.00 0.00 0.00 4.30
1917 1973 1.202770 CCTTGGACCGAACAAGTTCCT 60.203 52.381 7.32 0.00 42.84 3.36
1924 1980 2.028020 ACCGAACAAGTTCCTCCATCTC 60.028 50.000 7.32 0.00 36.27 2.75
1927 1983 1.290134 ACAAGTTCCTCCATCTCCCC 58.710 55.000 0.00 0.00 0.00 4.81
1928 1984 1.289160 CAAGTTCCTCCATCTCCCCA 58.711 55.000 0.00 0.00 0.00 4.96
2048 2129 5.181245 GTGTTGTTGCTTAGCTTTGGATAGA 59.819 40.000 5.60 0.00 0.00 1.98
2056 2139 6.154534 TGCTTAGCTTTGGATAGACACTTCTA 59.845 38.462 5.60 0.00 38.76 2.10
2085 2168 3.483808 TTGTGTTGTCTGTGATGGCTA 57.516 42.857 0.00 0.00 0.00 3.93
2087 2170 4.817318 TGTGTTGTCTGTGATGGCTATA 57.183 40.909 0.00 0.00 0.00 1.31
2116 2200 1.102978 GCTTGGGTGTGAAGTTGTGT 58.897 50.000 0.00 0.00 0.00 3.72
2132 2216 4.453136 AGTTGTGTTACACTTGTTGTTCGT 59.547 37.500 16.79 0.00 39.91 3.85
2232 2318 4.918810 AAAGAGATGTGTCAACCAAACC 57.081 40.909 0.00 0.00 0.00 3.27
2233 2319 3.576078 AGAGATGTGTCAACCAAACCA 57.424 42.857 0.00 0.00 0.00 3.67
2234 2320 3.897239 AGAGATGTGTCAACCAAACCAA 58.103 40.909 0.00 0.00 0.00 3.67
2235 2321 4.277476 AGAGATGTGTCAACCAAACCAAA 58.723 39.130 0.00 0.00 0.00 3.28
2236 2322 4.097892 AGAGATGTGTCAACCAAACCAAAC 59.902 41.667 0.00 0.00 0.00 2.93
2237 2323 3.766591 AGATGTGTCAACCAAACCAAACA 59.233 39.130 0.00 0.00 0.00 2.83
2238 2324 3.584406 TGTGTCAACCAAACCAAACAG 57.416 42.857 0.00 0.00 0.00 3.16
2239 2325 2.894126 TGTGTCAACCAAACCAAACAGT 59.106 40.909 0.00 0.00 0.00 3.55
2240 2326 3.249917 GTGTCAACCAAACCAAACAGTG 58.750 45.455 0.00 0.00 0.00 3.66
2241 2327 2.894126 TGTCAACCAAACCAAACAGTGT 59.106 40.909 0.00 0.00 0.00 3.55
2242 2328 3.057174 TGTCAACCAAACCAAACAGTGTC 60.057 43.478 0.00 0.00 0.00 3.67
2243 2329 2.162608 TCAACCAAACCAAACAGTGTCG 59.837 45.455 0.00 0.00 0.00 4.35
2244 2330 2.116827 ACCAAACCAAACAGTGTCGA 57.883 45.000 0.00 0.00 0.00 4.20
2245 2331 2.014128 ACCAAACCAAACAGTGTCGAG 58.986 47.619 0.00 0.00 0.00 4.04
2246 2332 2.285083 CCAAACCAAACAGTGTCGAGA 58.715 47.619 0.00 0.00 0.00 4.04
2247 2333 2.680841 CCAAACCAAACAGTGTCGAGAA 59.319 45.455 0.00 0.00 0.00 2.87
2248 2334 3.127895 CCAAACCAAACAGTGTCGAGAAA 59.872 43.478 0.00 0.00 0.00 2.52
2249 2335 4.095610 CAAACCAAACAGTGTCGAGAAAC 58.904 43.478 0.00 0.00 0.00 2.78
2250 2336 3.261981 ACCAAACAGTGTCGAGAAACT 57.738 42.857 0.00 0.00 0.00 2.66
2251 2337 3.606687 ACCAAACAGTGTCGAGAAACTT 58.393 40.909 0.00 0.00 0.00 2.66
2252 2338 3.621715 ACCAAACAGTGTCGAGAAACTTC 59.378 43.478 0.00 0.00 0.00 3.01
2253 2339 3.621268 CCAAACAGTGTCGAGAAACTTCA 59.379 43.478 0.00 0.00 0.00 3.02
2254 2340 4.260375 CCAAACAGTGTCGAGAAACTTCAG 60.260 45.833 0.00 0.00 0.00 3.02
2255 2341 2.474816 ACAGTGTCGAGAAACTTCAGC 58.525 47.619 0.00 0.00 0.00 4.26
2256 2342 1.453524 CAGTGTCGAGAAACTTCAGCG 59.546 52.381 0.00 0.00 0.00 5.18
2257 2343 0.161870 GTGTCGAGAAACTTCAGCGC 59.838 55.000 0.00 0.00 0.00 5.92
2258 2344 1.275471 TGTCGAGAAACTTCAGCGCG 61.275 55.000 0.00 0.00 0.00 6.86
2259 2345 1.002250 GTCGAGAAACTTCAGCGCGA 61.002 55.000 12.10 0.00 0.00 5.87
2260 2346 1.002250 TCGAGAAACTTCAGCGCGAC 61.002 55.000 12.10 0.04 0.00 5.19
2261 2347 1.412606 GAGAAACTTCAGCGCGACG 59.587 57.895 12.10 0.00 0.00 5.12
2262 2348 1.945776 GAGAAACTTCAGCGCGACGG 61.946 60.000 12.10 1.68 0.00 4.79
2263 2349 2.279918 AAACTTCAGCGCGACGGT 60.280 55.556 12.10 0.00 38.40 4.83
2264 2350 1.005294 GAAACTTCAGCGCGACGGTA 61.005 55.000 12.10 0.00 35.27 4.02
2265 2351 0.389426 AAACTTCAGCGCGACGGTAT 60.389 50.000 12.10 0.00 35.27 2.73
2266 2352 0.452987 AACTTCAGCGCGACGGTATA 59.547 50.000 12.10 0.00 35.27 1.47
2267 2353 0.452987 ACTTCAGCGCGACGGTATAA 59.547 50.000 12.10 0.00 35.27 0.98
2268 2354 1.121240 CTTCAGCGCGACGGTATAAG 58.879 55.000 12.10 0.00 35.27 1.73
2269 2355 0.734309 TTCAGCGCGACGGTATAAGA 59.266 50.000 12.10 0.00 35.27 2.10
2270 2356 0.028505 TCAGCGCGACGGTATAAGAC 59.971 55.000 12.10 0.00 35.27 3.01
2271 2357 0.029035 CAGCGCGACGGTATAAGACT 59.971 55.000 12.10 0.00 35.27 3.24
2272 2358 1.262417 CAGCGCGACGGTATAAGACTA 59.738 52.381 12.10 0.00 35.27 2.59
2273 2359 1.530293 AGCGCGACGGTATAAGACTAG 59.470 52.381 12.10 0.00 35.27 2.57
2274 2360 1.262683 GCGCGACGGTATAAGACTAGT 59.737 52.381 12.10 0.00 0.00 2.57
2275 2361 2.661439 GCGCGACGGTATAAGACTAGTC 60.661 54.545 15.41 15.41 34.51 2.59
2276 2362 2.541346 CGCGACGGTATAAGACTAGTCA 59.459 50.000 24.44 5.48 36.28 3.41
2277 2363 3.603401 CGCGACGGTATAAGACTAGTCAC 60.603 52.174 24.44 13.31 36.28 3.67
2278 2364 3.310774 GCGACGGTATAAGACTAGTCACA 59.689 47.826 24.44 11.85 36.28 3.58
2279 2365 4.552378 GCGACGGTATAAGACTAGTCACAG 60.552 50.000 24.44 15.73 36.28 3.66
2280 2366 4.569966 CGACGGTATAAGACTAGTCACAGT 59.430 45.833 24.44 18.55 36.28 3.55
2281 2367 5.502058 CGACGGTATAAGACTAGTCACAGTG 60.502 48.000 24.44 10.15 36.28 3.66
2282 2368 4.639310 ACGGTATAAGACTAGTCACAGTGG 59.361 45.833 24.44 10.23 0.00 4.00
2283 2369 4.880120 CGGTATAAGACTAGTCACAGTGGA 59.120 45.833 24.44 2.23 0.00 4.02
2284 2370 5.531659 CGGTATAAGACTAGTCACAGTGGAT 59.468 44.000 24.44 8.92 0.00 3.41
2285 2371 6.709397 CGGTATAAGACTAGTCACAGTGGATA 59.291 42.308 24.44 8.07 0.00 2.59
2286 2372 7.095144 CGGTATAAGACTAGTCACAGTGGATAG 60.095 44.444 24.44 6.11 0.00 2.08
2287 2373 7.720515 GGTATAAGACTAGTCACAGTGGATAGT 59.279 40.741 24.44 14.86 0.00 2.12
2288 2374 9.775854 GTATAAGACTAGTCACAGTGGATAGTA 57.224 37.037 24.44 4.83 0.00 1.82
2290 2376 7.393841 AAGACTAGTCACAGTGGATAGTAAC 57.606 40.000 24.44 7.29 0.00 2.50
2291 2377 6.723339 AGACTAGTCACAGTGGATAGTAACT 58.277 40.000 24.44 6.38 0.00 2.24
2292 2378 7.176490 AGACTAGTCACAGTGGATAGTAACTT 58.824 38.462 24.44 0.00 0.00 2.66
2293 2379 8.327271 AGACTAGTCACAGTGGATAGTAACTTA 58.673 37.037 24.44 0.00 0.00 2.24
2294 2380 8.508883 ACTAGTCACAGTGGATAGTAACTTAG 57.491 38.462 13.84 4.93 0.00 2.18
2295 2381 8.327271 ACTAGTCACAGTGGATAGTAACTTAGA 58.673 37.037 13.84 0.00 0.00 2.10
2296 2382 7.393841 AGTCACAGTGGATAGTAACTTAGAC 57.606 40.000 0.00 0.00 32.09 2.59
2297 2383 7.176490 AGTCACAGTGGATAGTAACTTAGACT 58.824 38.462 0.00 0.00 35.08 3.24
2298 2384 8.327271 AGTCACAGTGGATAGTAACTTAGACTA 58.673 37.037 0.00 0.00 36.74 2.59
2299 2385 8.614346 GTCACAGTGGATAGTAACTTAGACTAG 58.386 40.741 0.00 0.00 33.03 2.57
2300 2386 8.327271 TCACAGTGGATAGTAACTTAGACTAGT 58.673 37.037 0.00 0.00 33.03 2.57
2301 2387 9.610705 CACAGTGGATAGTAACTTAGACTAGTA 57.389 37.037 0.00 0.00 33.03 1.82
2307 2393 9.896263 GGATAGTAACTTAGACTAGTAACATGC 57.104 37.037 0.00 0.00 33.03 4.06
2314 2400 9.751542 AACTTAGACTAGTAACATGCATATGTC 57.248 33.333 0.00 0.00 46.54 3.06
2315 2401 8.914011 ACTTAGACTAGTAACATGCATATGTCA 58.086 33.333 0.00 3.51 46.54 3.58
2316 2402 9.186323 CTTAGACTAGTAACATGCATATGTCAC 57.814 37.037 0.00 0.00 46.54 3.67
2317 2403 7.353414 AGACTAGTAACATGCATATGTCACT 57.647 36.000 0.00 0.00 45.58 3.41
2318 2404 8.465273 AGACTAGTAACATGCATATGTCACTA 57.535 34.615 0.00 0.72 42.67 2.74
2322 2408 7.353414 AGTAACATGCATATGTCACTAGTCT 57.647 36.000 0.00 0.00 42.67 3.24
2323 2409 8.465273 AGTAACATGCATATGTCACTAGTCTA 57.535 34.615 0.00 0.00 42.67 2.59
2324 2410 9.083422 AGTAACATGCATATGTCACTAGTCTAT 57.917 33.333 0.00 0.00 42.67 1.98
2325 2411 9.133627 GTAACATGCATATGTCACTAGTCTATG 57.866 37.037 0.00 0.11 46.54 2.23
2326 2412 7.295322 ACATGCATATGTCACTAGTCTATGT 57.705 36.000 0.00 0.00 44.00 2.29
2327 2413 7.730084 ACATGCATATGTCACTAGTCTATGTT 58.270 34.615 0.00 0.00 44.00 2.71
2328 2414 8.860088 ACATGCATATGTCACTAGTCTATGTTA 58.140 33.333 0.00 0.00 44.00 2.41
2329 2415 9.133627 CATGCATATGTCACTAGTCTATGTTAC 57.866 37.037 0.00 0.00 0.00 2.50
2330 2416 8.465273 TGCATATGTCACTAGTCTATGTTACT 57.535 34.615 4.29 0.00 0.00 2.24
2331 2417 9.569122 TGCATATGTCACTAGTCTATGTTACTA 57.431 33.333 4.29 0.00 0.00 1.82
2332 2418 9.828852 GCATATGTCACTAGTCTATGTTACTAC 57.171 37.037 4.29 0.00 0.00 2.73
2336 2422 8.874744 TGTCACTAGTCTATGTTACTACCTTT 57.125 34.615 0.00 0.00 0.00 3.11
2337 2423 9.964354 TGTCACTAGTCTATGTTACTACCTTTA 57.036 33.333 0.00 0.00 0.00 1.85
2354 2440 9.152327 ACTACCTTTATATTGGGAAGTACTACC 57.848 37.037 9.10 9.10 0.00 3.18
2355 2441 9.377238 CTACCTTTATATTGGGAAGTACTACCT 57.623 37.037 15.31 2.02 0.00 3.08
2356 2442 8.260099 ACCTTTATATTGGGAAGTACTACCTC 57.740 38.462 15.31 3.62 0.00 3.85
2357 2443 7.291885 ACCTTTATATTGGGAAGTACTACCTCC 59.708 40.741 15.31 10.11 0.00 4.30
2358 2444 7.513091 CCTTTATATTGGGAAGTACTACCTCCT 59.487 40.741 15.31 5.25 0.00 3.69
2359 2445 8.865244 TTTATATTGGGAAGTACTACCTCCTT 57.135 34.615 15.31 4.01 0.00 3.36
2360 2446 6.997942 ATATTGGGAAGTACTACCTCCTTC 57.002 41.667 15.31 0.00 35.06 3.46
2361 2447 4.415224 TTGGGAAGTACTACCTCCTTCT 57.585 45.455 15.31 0.00 35.90 2.85
2362 2448 3.978610 TGGGAAGTACTACCTCCTTCTC 58.021 50.000 15.31 0.52 36.45 2.87
2363 2449 2.950975 GGGAAGTACTACCTCCTTCTCG 59.049 54.545 11.10 0.00 35.90 4.04
2364 2450 2.950975 GGAAGTACTACCTCCTTCTCGG 59.049 54.545 0.00 0.00 35.90 4.63
2365 2451 3.619419 GAAGTACTACCTCCTTCTCGGT 58.381 50.000 0.00 0.00 37.31 4.69
2366 2452 3.002038 AGTACTACCTCCTTCTCGGTG 57.998 52.381 0.00 0.00 34.76 4.94
2367 2453 2.575279 AGTACTACCTCCTTCTCGGTGA 59.425 50.000 0.00 0.00 34.76 4.02
2368 2454 2.599408 ACTACCTCCTTCTCGGTGAA 57.401 50.000 0.00 0.00 34.76 3.18
2369 2455 3.103080 ACTACCTCCTTCTCGGTGAAT 57.897 47.619 0.00 0.00 34.76 2.57
2370 2456 4.246712 ACTACCTCCTTCTCGGTGAATA 57.753 45.455 0.00 0.00 34.76 1.75
2371 2457 4.607239 ACTACCTCCTTCTCGGTGAATAA 58.393 43.478 0.00 0.00 34.76 1.40
2372 2458 4.645588 ACTACCTCCTTCTCGGTGAATAAG 59.354 45.833 0.00 0.00 34.76 1.73
2373 2459 3.442076 ACCTCCTTCTCGGTGAATAAGT 58.558 45.455 0.00 0.00 33.71 2.24
2374 2460 3.447944 ACCTCCTTCTCGGTGAATAAGTC 59.552 47.826 0.00 0.00 33.71 3.01
2375 2461 3.447586 CCTCCTTCTCGGTGAATAAGTCA 59.552 47.826 0.00 0.00 33.71 3.41
2376 2462 4.100189 CCTCCTTCTCGGTGAATAAGTCAT 59.900 45.833 0.00 0.00 38.90 3.06
2377 2463 5.395768 CCTCCTTCTCGGTGAATAAGTCATT 60.396 44.000 0.00 0.00 38.90 2.57
2378 2464 5.661458 TCCTTCTCGGTGAATAAGTCATTC 58.339 41.667 0.00 0.00 43.01 2.67
2395 2481 7.809546 AGTCATTCACATAGTTCTAGATCGA 57.190 36.000 0.00 0.00 0.00 3.59
2396 2482 7.644490 AGTCATTCACATAGTTCTAGATCGAC 58.356 38.462 0.00 0.00 0.00 4.20
2397 2483 7.500892 AGTCATTCACATAGTTCTAGATCGACT 59.499 37.037 0.00 0.00 0.00 4.18
2398 2484 8.775527 GTCATTCACATAGTTCTAGATCGACTA 58.224 37.037 5.46 5.46 0.00 2.59
2399 2485 9.508642 TCATTCACATAGTTCTAGATCGACTAT 57.491 33.333 9.02 9.02 37.14 2.12
2524 2610 9.831737 CATATTTATTTCCTCAAATCGATGACC 57.168 33.333 0.00 0.00 33.95 4.02
2525 2611 9.799106 ATATTTATTTCCTCAAATCGATGACCT 57.201 29.630 0.00 0.00 33.95 3.85
2527 2613 9.627123 ATTTATTTCCTCAAATCGATGACCTAA 57.373 29.630 0.00 0.00 33.95 2.69
2528 2614 9.456147 TTTATTTCCTCAAATCGATGACCTAAA 57.544 29.630 0.00 0.00 33.95 1.85
2529 2615 7.938140 ATTTCCTCAAATCGATGACCTAAAA 57.062 32.000 0.00 0.00 0.00 1.52
2530 2616 6.737254 TTCCTCAAATCGATGACCTAAAAC 57.263 37.500 0.00 0.00 0.00 2.43
2531 2617 6.049955 TCCTCAAATCGATGACCTAAAACT 57.950 37.500 0.00 0.00 0.00 2.66
2532 2618 7.177832 TCCTCAAATCGATGACCTAAAACTA 57.822 36.000 0.00 0.00 0.00 2.24
2533 2619 7.039882 TCCTCAAATCGATGACCTAAAACTAC 58.960 38.462 0.00 0.00 0.00 2.73
2534 2620 6.019801 CCTCAAATCGATGACCTAAAACTACG 60.020 42.308 0.00 0.00 0.00 3.51
2535 2621 5.290158 TCAAATCGATGACCTAAAACTACGC 59.710 40.000 0.00 0.00 0.00 4.42
2536 2622 2.789208 TCGATGACCTAAAACTACGCG 58.211 47.619 3.53 3.53 0.00 6.01
2537 2623 2.419673 TCGATGACCTAAAACTACGCGA 59.580 45.455 15.93 0.00 0.00 5.87
2538 2624 3.119884 TCGATGACCTAAAACTACGCGAA 60.120 43.478 15.93 0.00 0.00 4.70
2539 2625 3.795101 CGATGACCTAAAACTACGCGAAT 59.205 43.478 15.93 0.00 0.00 3.34
2540 2626 4.317139 CGATGACCTAAAACTACGCGAATG 60.317 45.833 15.93 4.47 0.00 2.67
2541 2627 4.177165 TGACCTAAAACTACGCGAATGA 57.823 40.909 15.93 0.00 0.00 2.57
2542 2628 3.922240 TGACCTAAAACTACGCGAATGAC 59.078 43.478 15.93 0.00 0.00 3.06
2543 2629 4.171754 GACCTAAAACTACGCGAATGACT 58.828 43.478 15.93 0.00 0.00 3.41
2544 2630 4.563061 ACCTAAAACTACGCGAATGACTT 58.437 39.130 15.93 0.94 0.00 3.01
2545 2631 5.713025 ACCTAAAACTACGCGAATGACTTA 58.287 37.500 15.93 2.18 0.00 2.24
2546 2632 6.335777 ACCTAAAACTACGCGAATGACTTAT 58.664 36.000 15.93 0.00 0.00 1.73
2547 2633 6.815142 ACCTAAAACTACGCGAATGACTTATT 59.185 34.615 15.93 0.00 0.00 1.40
2548 2634 7.009907 ACCTAAAACTACGCGAATGACTTATTC 59.990 37.037 15.93 0.00 41.46 1.75
2549 2635 6.715344 AAAACTACGCGAATGACTTATTCA 57.285 33.333 15.93 0.00 44.42 2.57
2550 2636 5.697848 AACTACGCGAATGACTTATTCAC 57.302 39.130 15.93 0.00 44.42 3.18
2551 2637 4.110482 ACTACGCGAATGACTTATTCACC 58.890 43.478 15.93 0.00 44.42 4.02
2552 2638 1.924524 ACGCGAATGACTTATTCACCG 59.075 47.619 15.93 0.00 44.42 4.94
2553 2639 2.190161 CGCGAATGACTTATTCACCGA 58.810 47.619 0.00 0.00 44.42 4.69
2554 2640 2.216488 CGCGAATGACTTATTCACCGAG 59.784 50.000 0.00 0.00 44.42 4.63
2555 2641 3.444916 GCGAATGACTTATTCACCGAGA 58.555 45.455 0.00 0.00 44.42 4.04
2556 2642 3.243177 GCGAATGACTTATTCACCGAGAC 59.757 47.826 0.00 0.00 44.42 3.36
2557 2643 4.421058 CGAATGACTTATTCACCGAGACA 58.579 43.478 0.00 0.00 44.42 3.41
2558 2644 4.500837 CGAATGACTTATTCACCGAGACAG 59.499 45.833 0.00 0.00 44.42 3.51
2559 2645 3.868757 TGACTTATTCACCGAGACAGG 57.131 47.619 0.00 0.00 37.30 4.00
2560 2646 2.496070 TGACTTATTCACCGAGACAGGG 59.504 50.000 0.00 0.00 35.02 4.45
2561 2647 1.831736 ACTTATTCACCGAGACAGGGG 59.168 52.381 0.00 0.00 35.56 4.79
2562 2648 1.831736 CTTATTCACCGAGACAGGGGT 59.168 52.381 0.00 0.00 35.77 4.95
2563 2649 2.832643 TATTCACCGAGACAGGGGTA 57.167 50.000 0.00 0.00 35.77 3.69
2564 2650 1.486211 ATTCACCGAGACAGGGGTAG 58.514 55.000 0.00 0.00 35.77 3.18
2565 2651 0.113776 TTCACCGAGACAGGGGTAGT 59.886 55.000 0.00 0.00 35.77 2.73
2566 2652 0.994247 TCACCGAGACAGGGGTAGTA 59.006 55.000 0.00 0.00 35.77 1.82
2567 2653 1.355381 TCACCGAGACAGGGGTAGTAA 59.645 52.381 0.00 0.00 35.77 2.24
2568 2654 1.475682 CACCGAGACAGGGGTAGTAAC 59.524 57.143 0.00 0.00 33.95 2.50
2569 2655 1.076024 ACCGAGACAGGGGTAGTAACA 59.924 52.381 0.00 0.00 33.95 2.41
2570 2656 2.292061 ACCGAGACAGGGGTAGTAACAT 60.292 50.000 0.00 0.00 33.95 2.71
2571 2657 3.053395 ACCGAGACAGGGGTAGTAACATA 60.053 47.826 0.00 0.00 33.95 2.29
2572 2658 4.150359 CCGAGACAGGGGTAGTAACATAT 58.850 47.826 0.00 0.00 0.00 1.78
2573 2659 4.022242 CCGAGACAGGGGTAGTAACATATG 60.022 50.000 0.00 0.00 0.00 1.78
2574 2660 4.583489 CGAGACAGGGGTAGTAACATATGT 59.417 45.833 1.41 1.41 0.00 2.29
2575 2661 5.507482 CGAGACAGGGGTAGTAACATATGTG 60.507 48.000 9.63 0.00 0.00 3.21
2576 2662 5.525484 AGACAGGGGTAGTAACATATGTGA 58.475 41.667 9.63 0.00 0.00 3.58
2577 2663 5.598830 AGACAGGGGTAGTAACATATGTGAG 59.401 44.000 9.63 0.00 0.00 3.51
2578 2664 4.654262 ACAGGGGTAGTAACATATGTGAGG 59.346 45.833 9.63 0.00 0.00 3.86
2579 2665 4.654262 CAGGGGTAGTAACATATGTGAGGT 59.346 45.833 9.63 0.00 0.00 3.85
2580 2666 4.654262 AGGGGTAGTAACATATGTGAGGTG 59.346 45.833 9.63 0.00 0.00 4.00
2581 2667 4.407945 GGGGTAGTAACATATGTGAGGTGT 59.592 45.833 9.63 0.00 0.00 4.16
2582 2668 5.452917 GGGGTAGTAACATATGTGAGGTGTC 60.453 48.000 9.63 0.00 0.00 3.67
2583 2669 5.128171 GGGTAGTAACATATGTGAGGTGTCA 59.872 44.000 9.63 0.00 0.00 3.58
2584 2670 6.183360 GGGTAGTAACATATGTGAGGTGTCAT 60.183 42.308 9.63 0.00 34.36 3.06
2585 2671 6.701841 GGTAGTAACATATGTGAGGTGTCATG 59.298 42.308 9.63 0.00 34.36 3.07
2586 2672 5.118990 AGTAACATATGTGAGGTGTCATGC 58.881 41.667 9.63 0.00 34.36 4.06
2587 2673 3.632643 ACATATGTGAGGTGTCATGCA 57.367 42.857 7.78 0.00 34.36 3.96
2588 2674 3.954200 ACATATGTGAGGTGTCATGCAA 58.046 40.909 7.78 0.00 34.36 4.08
2589 2675 4.529897 ACATATGTGAGGTGTCATGCAAT 58.470 39.130 7.78 0.00 34.36 3.56
2590 2676 5.683681 ACATATGTGAGGTGTCATGCAATA 58.316 37.500 7.78 0.00 34.36 1.90
2591 2677 5.761726 ACATATGTGAGGTGTCATGCAATAG 59.238 40.000 7.78 0.00 34.36 1.73
2592 2678 3.979101 TGTGAGGTGTCATGCAATAGA 57.021 42.857 0.00 0.00 34.36 1.98
2593 2679 4.492494 TGTGAGGTGTCATGCAATAGAT 57.508 40.909 0.00 0.00 34.36 1.98
2594 2680 4.445453 TGTGAGGTGTCATGCAATAGATC 58.555 43.478 0.00 0.00 34.36 2.75
2595 2681 4.080975 TGTGAGGTGTCATGCAATAGATCA 60.081 41.667 0.00 0.00 34.36 2.92
2596 2682 5.061853 GTGAGGTGTCATGCAATAGATCAT 58.938 41.667 0.00 0.00 34.36 2.45
2597 2683 5.530171 GTGAGGTGTCATGCAATAGATCATT 59.470 40.000 0.00 0.00 34.36 2.57
2598 2684 6.039047 GTGAGGTGTCATGCAATAGATCATTT 59.961 38.462 0.00 0.00 34.36 2.32
2599 2685 7.227314 GTGAGGTGTCATGCAATAGATCATTTA 59.773 37.037 0.00 0.00 34.36 1.40
2600 2686 7.940688 TGAGGTGTCATGCAATAGATCATTTAT 59.059 33.333 0.00 0.00 0.00 1.40
2601 2687 8.701908 AGGTGTCATGCAATAGATCATTTATT 57.298 30.769 0.00 0.00 0.00 1.40
2602 2688 9.797642 AGGTGTCATGCAATAGATCATTTATTA 57.202 29.630 0.00 0.00 0.00 0.98
2605 2691 9.797642 TGTCATGCAATAGATCATTTATTAGGT 57.202 29.630 0.00 0.00 0.00 3.08
2626 2712 7.962995 AGGTTATAGACTCATCTTGTCTTGA 57.037 36.000 1.67 0.00 41.45 3.02
2627 2713 8.546083 AGGTTATAGACTCATCTTGTCTTGAT 57.454 34.615 1.67 0.00 41.45 2.57
2628 2714 9.647918 AGGTTATAGACTCATCTTGTCTTGATA 57.352 33.333 1.67 0.00 41.45 2.15
2629 2715 9.685828 GGTTATAGACTCATCTTGTCTTGATAC 57.314 37.037 1.67 0.00 41.45 2.24
2630 2716 9.388346 GTTATAGACTCATCTTGTCTTGATACG 57.612 37.037 1.67 0.00 41.45 3.06
2631 2717 5.906113 AGACTCATCTTGTCTTGATACGT 57.094 39.130 0.00 0.00 41.45 3.57
2632 2718 5.645624 AGACTCATCTTGTCTTGATACGTG 58.354 41.667 0.00 0.00 41.45 4.49
2633 2719 5.184096 AGACTCATCTTGTCTTGATACGTGT 59.816 40.000 0.00 0.00 41.45 4.49
2634 2720 5.164233 ACTCATCTTGTCTTGATACGTGTG 58.836 41.667 0.00 0.00 0.00 3.82
2635 2721 5.048013 ACTCATCTTGTCTTGATACGTGTGA 60.048 40.000 0.00 0.00 0.00 3.58
2636 2722 5.965922 TCATCTTGTCTTGATACGTGTGAT 58.034 37.500 0.00 0.00 0.00 3.06
2637 2723 5.807011 TCATCTTGTCTTGATACGTGTGATG 59.193 40.000 0.00 0.00 0.00 3.07
2638 2724 5.134202 TCTTGTCTTGATACGTGTGATGT 57.866 39.130 0.00 0.00 0.00 3.06
2639 2725 5.538118 TCTTGTCTTGATACGTGTGATGTT 58.462 37.500 0.00 0.00 0.00 2.71
2640 2726 6.683715 TCTTGTCTTGATACGTGTGATGTTA 58.316 36.000 0.00 0.00 0.00 2.41
2641 2727 6.584942 TCTTGTCTTGATACGTGTGATGTTAC 59.415 38.462 0.00 0.00 0.00 2.50
2642 2728 5.774630 TGTCTTGATACGTGTGATGTTACA 58.225 37.500 0.00 0.00 0.00 2.41
2643 2729 5.861787 TGTCTTGATACGTGTGATGTTACAG 59.138 40.000 0.00 0.00 0.00 2.74
2644 2730 5.862323 GTCTTGATACGTGTGATGTTACAGT 59.138 40.000 0.00 0.00 0.00 3.55
2645 2731 7.025365 GTCTTGATACGTGTGATGTTACAGTA 58.975 38.462 0.00 0.00 0.00 2.74
2646 2732 7.539710 GTCTTGATACGTGTGATGTTACAGTAA 59.460 37.037 0.00 0.00 0.00 2.24
2647 2733 7.539710 TCTTGATACGTGTGATGTTACAGTAAC 59.460 37.037 15.58 15.58 39.11 2.50
2648 2734 6.916440 TGATACGTGTGATGTTACAGTAACT 58.084 36.000 21.56 9.41 39.38 2.24
2649 2735 8.042944 TGATACGTGTGATGTTACAGTAACTA 57.957 34.615 21.56 10.50 39.38 2.24
2650 2736 8.179615 TGATACGTGTGATGTTACAGTAACTAG 58.820 37.037 21.56 9.30 39.38 2.57
2651 2737 6.323203 ACGTGTGATGTTACAGTAACTAGT 57.677 37.500 21.56 9.82 39.38 2.57
2652 2738 6.742109 ACGTGTGATGTTACAGTAACTAGTT 58.258 36.000 21.56 13.68 39.38 2.24
2653 2739 7.874940 ACGTGTGATGTTACAGTAACTAGTTA 58.125 34.615 21.56 11.38 39.38 2.24
2654 2740 8.517878 ACGTGTGATGTTACAGTAACTAGTTAT 58.482 33.333 21.56 8.59 39.38 1.89
2655 2741 8.795341 CGTGTGATGTTACAGTAACTAGTTATG 58.205 37.037 21.56 17.28 39.38 1.90
2656 2742 9.635520 GTGTGATGTTACAGTAACTAGTTATGT 57.364 33.333 21.56 21.00 39.38 2.29
2662 2748 9.912634 TGTTACAGTAACTAGTTATGTTACCAC 57.087 33.333 24.69 19.04 46.31 4.16
2663 2749 9.912634 GTTACAGTAACTAGTTATGTTACCACA 57.087 33.333 23.58 11.00 46.31 4.17
2665 2751 8.997621 ACAGTAACTAGTTATGTTACCACATG 57.002 34.615 18.03 5.09 46.31 3.21
2666 2752 7.548075 ACAGTAACTAGTTATGTTACCACATGC 59.452 37.037 18.03 1.38 46.31 4.06
2667 2753 7.011109 CAGTAACTAGTTATGTTACCACATGCC 59.989 40.741 18.03 0.98 46.31 4.40
2668 2754 4.777463 ACTAGTTATGTTACCACATGCCC 58.223 43.478 0.00 0.00 43.92 5.36
2669 2755 3.012934 AGTTATGTTACCACATGCCCC 57.987 47.619 0.00 0.00 43.92 5.80
2670 2756 2.580783 AGTTATGTTACCACATGCCCCT 59.419 45.455 0.00 0.00 43.92 4.79
2671 2757 2.949644 GTTATGTTACCACATGCCCCTC 59.050 50.000 0.00 0.00 43.92 4.30
2672 2758 1.298953 ATGTTACCACATGCCCCTCT 58.701 50.000 0.00 0.00 42.46 3.69
2673 2759 1.072266 TGTTACCACATGCCCCTCTT 58.928 50.000 0.00 0.00 0.00 2.85
2674 2760 1.427368 TGTTACCACATGCCCCTCTTT 59.573 47.619 0.00 0.00 0.00 2.52
2675 2761 2.092323 GTTACCACATGCCCCTCTTTC 58.908 52.381 0.00 0.00 0.00 2.62
2676 2762 0.623723 TACCACATGCCCCTCTTTCC 59.376 55.000 0.00 0.00 0.00 3.13
2677 2763 1.142688 ACCACATGCCCCTCTTTCCT 61.143 55.000 0.00 0.00 0.00 3.36
2678 2764 0.394899 CCACATGCCCCTCTTTCCTC 60.395 60.000 0.00 0.00 0.00 3.71
2679 2765 0.329261 CACATGCCCCTCTTTCCTCA 59.671 55.000 0.00 0.00 0.00 3.86
2680 2766 1.064166 CACATGCCCCTCTTTCCTCAT 60.064 52.381 0.00 0.00 0.00 2.90
2681 2767 1.642762 ACATGCCCCTCTTTCCTCATT 59.357 47.619 0.00 0.00 0.00 2.57
2682 2768 2.852449 ACATGCCCCTCTTTCCTCATTA 59.148 45.455 0.00 0.00 0.00 1.90
2683 2769 3.217626 CATGCCCCTCTTTCCTCATTAC 58.782 50.000 0.00 0.00 0.00 1.89
2684 2770 2.562296 TGCCCCTCTTTCCTCATTACT 58.438 47.619 0.00 0.00 0.00 2.24
2685 2771 2.505819 TGCCCCTCTTTCCTCATTACTC 59.494 50.000 0.00 0.00 0.00 2.59
2686 2772 2.158740 GCCCCTCTTTCCTCATTACTCC 60.159 54.545 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 9.129209 CGGTCATGTCTACACAGTTATATTATG 57.871 37.037 0.00 0.00 35.41 1.90
13 14 9.074576 TCGGTCATGTCTACACAGTTATATTAT 57.925 33.333 0.00 0.00 35.41 1.28
14 15 8.454570 TCGGTCATGTCTACACAGTTATATTA 57.545 34.615 0.00 0.00 35.41 0.98
15 16 7.284716 TCTCGGTCATGTCTACACAGTTATATT 59.715 37.037 0.00 0.00 35.41 1.28
16 17 6.771267 TCTCGGTCATGTCTACACAGTTATAT 59.229 38.462 0.00 0.00 35.41 0.86
17 18 6.037940 GTCTCGGTCATGTCTACACAGTTATA 59.962 42.308 0.00 0.00 35.41 0.98
18 19 4.948004 TCTCGGTCATGTCTACACAGTTAT 59.052 41.667 0.00 0.00 35.41 1.89
19 20 4.155462 GTCTCGGTCATGTCTACACAGTTA 59.845 45.833 0.00 0.00 35.41 2.24
24 25 2.747989 TGAGTCTCGGTCATGTCTACAC 59.252 50.000 0.00 0.00 0.00 2.90
66 67 1.496060 TATGAGCATCCAGGTTCCGT 58.504 50.000 0.00 0.00 0.00 4.69
175 176 3.400255 TGATACCGACGATCGAATCTCT 58.600 45.455 24.34 0.00 43.74 3.10
373 375 3.811083 TCGATGGTGTTTGTTAGGTTGT 58.189 40.909 0.00 0.00 0.00 3.32
378 380 4.084013 GGTGTCTTCGATGGTGTTTGTTAG 60.084 45.833 0.00 0.00 0.00 2.34
379 381 3.810941 GGTGTCTTCGATGGTGTTTGTTA 59.189 43.478 0.00 0.00 0.00 2.41
476 478 9.533831 TCCTATGACTATGAGATTATGCAACTA 57.466 33.333 0.00 0.00 0.00 2.24
590 592 4.202253 TGAACGGGATCACATCATTAGAGG 60.202 45.833 0.00 0.00 0.00 3.69
634 637 7.660208 TCAAAGATGGTTAAGTTTCCTAGACAC 59.340 37.037 0.00 0.00 0.00 3.67
684 687 7.997773 AGACAAACAGAGTGTCACTAGTATA 57.002 36.000 5.21 0.00 46.44 1.47
794 797 7.707104 CCCTAGAGGCAATAATAAAGTTGTTG 58.293 38.462 0.00 0.00 0.00 3.33
833 836 6.349777 GCTAGTAAATGTGCCCATGTTTTGTA 60.350 38.462 0.00 0.00 0.00 2.41
834 837 4.953940 AGTAAATGTGCCCATGTTTTGT 57.046 36.364 0.00 0.00 0.00 2.83
835 838 4.864247 GCTAGTAAATGTGCCCATGTTTTG 59.136 41.667 0.00 0.00 0.00 2.44
836 839 4.526262 TGCTAGTAAATGTGCCCATGTTTT 59.474 37.500 0.00 0.00 0.00 2.43
837 840 4.085733 TGCTAGTAAATGTGCCCATGTTT 58.914 39.130 0.00 0.00 0.00 2.83
838 841 3.696045 TGCTAGTAAATGTGCCCATGTT 58.304 40.909 0.00 0.00 0.00 2.71
839 842 3.364460 TGCTAGTAAATGTGCCCATGT 57.636 42.857 0.00 0.00 0.00 3.21
840 843 3.443329 TGTTGCTAGTAAATGTGCCCATG 59.557 43.478 0.00 0.00 0.00 3.66
841 844 3.696045 TGTTGCTAGTAAATGTGCCCAT 58.304 40.909 0.00 0.00 0.00 4.00
842 845 3.147553 TGTTGCTAGTAAATGTGCCCA 57.852 42.857 0.00 0.00 0.00 5.36
843 846 5.828299 TTATGTTGCTAGTAAATGTGCCC 57.172 39.130 0.00 0.00 0.00 5.36
844 847 7.596995 TGTTTTTATGTTGCTAGTAAATGTGCC 59.403 33.333 0.00 0.00 0.00 5.01
845 848 8.424731 GTGTTTTTATGTTGCTAGTAAATGTGC 58.575 33.333 0.00 0.00 0.00 4.57
846 849 9.457110 TGTGTTTTTATGTTGCTAGTAAATGTG 57.543 29.630 0.00 0.00 0.00 3.21
847 850 9.458374 GTGTGTTTTTATGTTGCTAGTAAATGT 57.542 29.630 0.00 0.00 0.00 2.71
848 851 9.457110 TGTGTGTTTTTATGTTGCTAGTAAATG 57.543 29.630 0.00 0.00 0.00 2.32
850 853 9.856488 TTTGTGTGTTTTTATGTTGCTAGTAAA 57.144 25.926 0.00 0.00 0.00 2.01
887 890 8.295288 GCAGTATACTAACACGTGGATATTAGT 58.705 37.037 24.14 24.14 40.21 2.24
888 891 7.754027 GGCAGTATACTAACACGTGGATATTAG 59.246 40.741 21.57 19.06 0.00 1.73
889 892 7.449395 AGGCAGTATACTAACACGTGGATATTA 59.551 37.037 21.57 11.12 0.00 0.98
890 893 6.267014 AGGCAGTATACTAACACGTGGATATT 59.733 38.462 21.57 7.45 0.00 1.28
891 894 5.773680 AGGCAGTATACTAACACGTGGATAT 59.226 40.000 21.57 13.23 0.00 1.63
892 895 5.009310 CAGGCAGTATACTAACACGTGGATA 59.991 44.000 21.57 11.54 0.00 2.59
893 896 3.958798 AGGCAGTATACTAACACGTGGAT 59.041 43.478 21.57 10.94 0.00 3.41
894 897 3.129813 CAGGCAGTATACTAACACGTGGA 59.870 47.826 21.57 6.36 0.00 4.02
895 898 3.129813 TCAGGCAGTATACTAACACGTGG 59.870 47.826 21.57 4.47 0.00 4.94
896 899 4.365899 TCAGGCAGTATACTAACACGTG 57.634 45.455 15.48 15.48 0.00 4.49
897 900 6.896021 ATATCAGGCAGTATACTAACACGT 57.104 37.500 4.74 0.00 0.00 4.49
898 901 7.326305 GTGAATATCAGGCAGTATACTAACACG 59.674 40.741 4.74 0.00 0.00 4.49
899 902 7.326305 CGTGAATATCAGGCAGTATACTAACAC 59.674 40.741 4.74 3.42 0.00 3.32
900 903 7.013942 ACGTGAATATCAGGCAGTATACTAACA 59.986 37.037 4.74 0.00 35.83 2.41
901 904 7.368833 ACGTGAATATCAGGCAGTATACTAAC 58.631 38.462 4.74 1.45 35.83 2.34
902 905 7.520451 ACGTGAATATCAGGCAGTATACTAA 57.480 36.000 4.74 0.00 35.83 2.24
903 906 7.148523 CGTACGTGAATATCAGGCAGTATACTA 60.149 40.741 7.22 0.00 35.83 1.82
904 907 6.348295 CGTACGTGAATATCAGGCAGTATACT 60.348 42.308 7.22 0.00 35.83 2.12
905 908 5.793952 CGTACGTGAATATCAGGCAGTATAC 59.206 44.000 7.22 0.00 35.83 1.47
906 909 5.618418 GCGTACGTGAATATCAGGCAGTATA 60.618 44.000 17.90 0.00 35.83 1.47
907 910 4.795268 CGTACGTGAATATCAGGCAGTAT 58.205 43.478 7.22 0.00 35.83 2.12
908 911 3.549423 GCGTACGTGAATATCAGGCAGTA 60.549 47.826 17.90 0.00 35.83 2.74
909 912 2.798499 GCGTACGTGAATATCAGGCAGT 60.798 50.000 17.90 0.00 35.83 4.40
910 913 1.787155 GCGTACGTGAATATCAGGCAG 59.213 52.381 17.90 0.00 35.83 4.85
911 914 1.135333 TGCGTACGTGAATATCAGGCA 59.865 47.619 17.90 0.00 35.83 4.75
912 915 1.847818 TGCGTACGTGAATATCAGGC 58.152 50.000 17.90 0.00 35.83 4.85
913 916 5.690409 AGTAAATGCGTACGTGAATATCAGG 59.310 40.000 17.90 0.00 38.16 3.86
914 917 6.749216 AGTAAATGCGTACGTGAATATCAG 57.251 37.500 17.90 0.00 0.00 2.90
915 918 7.377662 CACTAGTAAATGCGTACGTGAATATCA 59.622 37.037 17.90 4.48 0.00 2.15
916 919 7.377928 ACACTAGTAAATGCGTACGTGAATATC 59.622 37.037 17.90 0.00 0.00 1.63
917 920 7.198390 ACACTAGTAAATGCGTACGTGAATAT 58.802 34.615 17.90 1.55 0.00 1.28
918 921 6.554419 ACACTAGTAAATGCGTACGTGAATA 58.446 36.000 17.90 3.18 0.00 1.75
919 922 5.404946 ACACTAGTAAATGCGTACGTGAAT 58.595 37.500 17.90 5.80 0.00 2.57
920 923 4.797471 ACACTAGTAAATGCGTACGTGAA 58.203 39.130 17.90 3.43 0.00 3.18
921 924 4.424061 ACACTAGTAAATGCGTACGTGA 57.576 40.909 17.90 4.24 0.00 4.35
922 925 5.505165 AAACACTAGTAAATGCGTACGTG 57.495 39.130 17.90 5.41 0.00 4.49
923 926 5.691305 TCAAAACACTAGTAAATGCGTACGT 59.309 36.000 17.90 0.00 0.00 3.57
924 927 6.143349 TCAAAACACTAGTAAATGCGTACG 57.857 37.500 11.84 11.84 0.00 3.67
925 928 8.770850 TTTTCAAAACACTAGTAAATGCGTAC 57.229 30.769 0.00 0.00 0.00 3.67
949 952 2.929043 AGGGGGAGATCCACATCTTTTT 59.071 45.455 3.02 0.00 42.98 1.94
950 953 2.511637 GAGGGGGAGATCCACATCTTTT 59.488 50.000 8.51 0.00 46.08 2.27
951 954 2.131023 GAGGGGGAGATCCACATCTTT 58.869 52.381 8.51 0.00 46.08 2.52
952 955 1.813102 GAGGGGGAGATCCACATCTT 58.187 55.000 8.51 0.00 46.08 2.40
953 956 3.567902 GAGGGGGAGATCCACATCT 57.432 57.895 8.51 0.00 46.08 2.90
955 958 1.073397 GGGAGGGGGAGATCCACAT 60.073 63.158 3.02 0.00 42.98 3.21
956 959 2.372688 GGGAGGGGGAGATCCACA 59.627 66.667 3.02 0.00 42.98 4.17
957 960 2.448736 GGGGAGGGGGAGATCCAC 60.449 72.222 0.47 0.00 39.99 4.02
958 961 2.628465 AGGGGAGGGGGAGATCCA 60.628 66.667 0.47 0.00 37.33 3.41
959 962 2.205749 GAGGGGAGGGGGAGATCC 59.794 72.222 0.00 0.00 34.64 3.36
960 963 1.460497 GTGAGGGGAGGGGGAGATC 60.460 68.421 0.00 0.00 0.00 2.75
961 964 2.706071 GTGAGGGGAGGGGGAGAT 59.294 66.667 0.00 0.00 0.00 2.75
962 965 3.695825 GGTGAGGGGAGGGGGAGA 61.696 72.222 0.00 0.00 0.00 3.71
963 966 4.825679 GGGTGAGGGGAGGGGGAG 62.826 77.778 0.00 0.00 0.00 4.30
967 970 4.693915 TTGGGGGTGAGGGGAGGG 62.694 72.222 0.00 0.00 0.00 4.30
968 971 1.735455 TTTTTGGGGGTGAGGGGAGG 61.735 60.000 0.00 0.00 0.00 4.30
969 972 1.857777 TTTTTGGGGGTGAGGGGAG 59.142 57.895 0.00 0.00 0.00 4.30
970 973 4.125590 TTTTTGGGGGTGAGGGGA 57.874 55.556 0.00 0.00 0.00 4.81
1082 1101 4.373116 TTGTCACCTCGCCTCCGC 62.373 66.667 0.00 0.00 0.00 5.54
1083 1102 2.125912 CTTGTCACCTCGCCTCCG 60.126 66.667 0.00 0.00 0.00 4.63
1084 1103 2.435059 GCTTGTCACCTCGCCTCC 60.435 66.667 0.00 0.00 0.00 4.30
1085 1104 2.811317 CGCTTGTCACCTCGCCTC 60.811 66.667 0.00 0.00 0.00 4.70
1109 1128 2.032681 GCACCACCACACCTCCTC 59.967 66.667 0.00 0.00 0.00 3.71
1110 1129 2.448542 AGCACCACCACACCTCCT 60.449 61.111 0.00 0.00 0.00 3.69
1111 1130 2.281761 CAGCACCACCACACCTCC 60.282 66.667 0.00 0.00 0.00 4.30
1113 1132 3.096495 ACCAGCACCACCACACCT 61.096 61.111 0.00 0.00 0.00 4.00
1115 1134 2.972505 CGACCAGCACCACCACAC 60.973 66.667 0.00 0.00 0.00 3.82
1118 1147 2.523168 TCTCGACCAGCACCACCA 60.523 61.111 0.00 0.00 0.00 4.17
1156 1185 2.515901 GGGGCCTCCGTTATGCAT 59.484 61.111 3.79 3.79 0.00 3.96
1175 1204 4.035102 GGACCTCCACAGCCCCAC 62.035 72.222 0.00 0.00 35.64 4.61
1176 1205 4.270153 AGGACCTCCACAGCCCCA 62.270 66.667 0.00 0.00 38.89 4.96
1177 1206 3.721706 CAGGACCTCCACAGCCCC 61.722 72.222 0.00 0.00 38.89 5.80
1179 1208 2.607750 TCCAGGACCTCCACAGCC 60.608 66.667 0.00 0.00 38.89 4.85
1183 1212 2.985456 CTGCTCCAGGACCTCCAC 59.015 66.667 0.00 0.00 38.89 4.02
1218 1247 1.841103 GATCTCCTCCAGGGCCCTC 60.841 68.421 25.77 3.12 35.41 4.30
1222 1251 1.383803 ACCAGATCTCCTCCAGGGC 60.384 63.158 0.00 0.00 35.41 5.19
1223 1252 1.053264 CCACCAGATCTCCTCCAGGG 61.053 65.000 0.00 0.00 35.41 4.45
1248 1277 2.507944 GCTCGGATCAGCATGGGT 59.492 61.111 0.31 0.00 39.43 4.51
1250 1279 2.281345 GGGCTCGGATCAGCATGG 60.281 66.667 7.30 0.00 41.65 3.66
1252 1281 2.164865 GATCGGGCTCGGATCAGCAT 62.165 60.000 5.94 0.00 41.65 3.79
1253 1282 2.839632 ATCGGGCTCGGATCAGCA 60.840 61.111 5.94 0.00 41.65 4.41
1273 1313 3.376918 GAGCAGCCCACAAAGCCC 61.377 66.667 0.00 0.00 0.00 5.19
1307 1347 1.377725 CCAGCTTCGAGTGGCCAAT 60.378 57.895 7.24 5.98 0.00 3.16
1308 1348 2.032528 CCAGCTTCGAGTGGCCAA 59.967 61.111 7.24 0.00 0.00 4.52
1355 1395 0.755686 CATAGCAGAGGGTCCTCCAC 59.244 60.000 12.99 6.15 43.70 4.02
1372 1412 2.692368 ACCATCCACCTCCCGCAT 60.692 61.111 0.00 0.00 0.00 4.73
1411 1451 0.541063 TCTTCCACCTCCTGCACGTA 60.541 55.000 0.00 0.00 0.00 3.57
1412 1452 1.837051 TCTTCCACCTCCTGCACGT 60.837 57.895 0.00 0.00 0.00 4.49
1443 1483 2.819984 CTACCAACACCCGCATGGCT 62.820 60.000 0.00 0.00 37.77 4.75
1461 1501 0.892358 TAGCCGTGAAGTCGTGGTCT 60.892 55.000 0.00 0.00 0.00 3.85
1555 1597 2.030823 CGTCCGTATAGTCGCACAACTA 59.969 50.000 0.00 0.00 36.24 2.24
1619 1661 1.271163 GGAGGAAAACGACACCCATGA 60.271 52.381 0.00 0.00 0.00 3.07
1685 1736 1.456287 GGAGACAACTGCCAACCCT 59.544 57.895 0.00 0.00 0.00 4.34
1797 1849 0.872021 GAGCGCCACATAGAACCTCG 60.872 60.000 2.29 0.00 0.00 4.63
1887 1941 1.971695 GGTCCAAGGAAAGCACGGG 60.972 63.158 0.00 0.00 0.00 5.28
1889 1943 0.882927 TTCGGTCCAAGGAAAGCACG 60.883 55.000 0.00 0.00 0.00 5.34
1908 1964 1.290134 GGGGAGATGGAGGAACTTGT 58.710 55.000 0.00 0.00 41.55 3.16
1917 1973 0.914417 GAAGGTGGTGGGGAGATGGA 60.914 60.000 0.00 0.00 0.00 3.41
1924 1980 1.891011 GCCTAAAAGAAGGTGGTGGGG 60.891 57.143 0.00 0.00 39.02 4.96
1927 1983 3.420893 TGATGCCTAAAAGAAGGTGGTG 58.579 45.455 0.00 0.00 39.02 4.17
1928 1984 3.806949 TGATGCCTAAAAGAAGGTGGT 57.193 42.857 0.00 0.00 39.02 4.16
2048 2129 8.276252 ACAACACAAATACAAAGTAGAAGTGT 57.724 30.769 0.00 0.00 39.13 3.55
2056 2139 6.751514 TCACAGACAACACAAATACAAAGT 57.248 33.333 0.00 0.00 0.00 2.66
2085 2168 4.161565 TCACACCCAAGCTAGTTCGAATAT 59.838 41.667 0.00 0.00 0.00 1.28
2087 2170 2.301870 TCACACCCAAGCTAGTTCGAAT 59.698 45.455 0.00 0.00 0.00 3.34
2116 2200 5.398176 CTTGCTACGAACAACAAGTGTAA 57.602 39.130 0.00 0.00 40.60 2.41
2132 2216 4.873746 ACAAGAGAGCTACAACTTGCTA 57.126 40.909 16.20 0.00 42.00 3.49
2216 2302 4.111916 CTGTTTGGTTTGGTTGACACATC 58.888 43.478 0.00 0.00 0.00 3.06
2217 2303 3.513515 ACTGTTTGGTTTGGTTGACACAT 59.486 39.130 0.00 0.00 0.00 3.21
2218 2304 2.894126 ACTGTTTGGTTTGGTTGACACA 59.106 40.909 0.00 0.00 0.00 3.72
2219 2305 3.249917 CACTGTTTGGTTTGGTTGACAC 58.750 45.455 0.00 0.00 0.00 3.67
2220 2306 2.894126 ACACTGTTTGGTTTGGTTGACA 59.106 40.909 0.00 0.00 0.00 3.58
2221 2307 3.507786 GACACTGTTTGGTTTGGTTGAC 58.492 45.455 0.00 0.00 0.00 3.18
2222 2308 2.162608 CGACACTGTTTGGTTTGGTTGA 59.837 45.455 0.00 0.00 0.00 3.18
2223 2309 2.162608 TCGACACTGTTTGGTTTGGTTG 59.837 45.455 0.00 0.00 0.00 3.77
2224 2310 2.422127 CTCGACACTGTTTGGTTTGGTT 59.578 45.455 0.00 0.00 0.00 3.67
2225 2311 2.014128 CTCGACACTGTTTGGTTTGGT 58.986 47.619 0.00 0.00 0.00 3.67
2226 2312 2.285083 TCTCGACACTGTTTGGTTTGG 58.715 47.619 0.00 0.00 0.00 3.28
2227 2313 4.095610 GTTTCTCGACACTGTTTGGTTTG 58.904 43.478 0.00 0.00 0.00 2.93
2228 2314 4.007659 AGTTTCTCGACACTGTTTGGTTT 58.992 39.130 0.00 0.00 0.00 3.27
2229 2315 3.606687 AGTTTCTCGACACTGTTTGGTT 58.393 40.909 0.00 0.00 0.00 3.67
2230 2316 3.261981 AGTTTCTCGACACTGTTTGGT 57.738 42.857 0.00 0.00 0.00 3.67
2231 2317 3.621268 TGAAGTTTCTCGACACTGTTTGG 59.379 43.478 0.00 0.00 0.00 3.28
2232 2318 4.783450 GCTGAAGTTTCTCGACACTGTTTG 60.783 45.833 0.00 0.00 0.00 2.93
2233 2319 3.309954 GCTGAAGTTTCTCGACACTGTTT 59.690 43.478 0.00 0.00 0.00 2.83
2234 2320 2.866762 GCTGAAGTTTCTCGACACTGTT 59.133 45.455 0.00 0.00 0.00 3.16
2235 2321 2.474816 GCTGAAGTTTCTCGACACTGT 58.525 47.619 0.00 0.00 0.00 3.55
2236 2322 1.453524 CGCTGAAGTTTCTCGACACTG 59.546 52.381 0.00 0.00 0.00 3.66
2237 2323 1.772182 CGCTGAAGTTTCTCGACACT 58.228 50.000 0.00 0.00 0.00 3.55
2238 2324 0.161870 GCGCTGAAGTTTCTCGACAC 59.838 55.000 0.00 0.00 0.00 3.67
2239 2325 1.275471 CGCGCTGAAGTTTCTCGACA 61.275 55.000 5.56 0.00 0.00 4.35
2240 2326 1.002250 TCGCGCTGAAGTTTCTCGAC 61.002 55.000 5.56 3.28 0.00 4.20
2241 2327 1.002250 GTCGCGCTGAAGTTTCTCGA 61.002 55.000 5.56 0.00 0.00 4.04
2242 2328 1.412606 GTCGCGCTGAAGTTTCTCG 59.587 57.895 5.56 0.00 0.00 4.04
2243 2329 1.412606 CGTCGCGCTGAAGTTTCTC 59.587 57.895 5.56 0.00 0.00 2.87
2244 2330 2.022129 CCGTCGCGCTGAAGTTTCT 61.022 57.895 5.56 0.00 0.00 2.52
2245 2331 1.005294 TACCGTCGCGCTGAAGTTTC 61.005 55.000 5.56 0.00 0.00 2.78
2246 2332 0.389426 ATACCGTCGCGCTGAAGTTT 60.389 50.000 5.56 0.00 0.00 2.66
2247 2333 0.452987 TATACCGTCGCGCTGAAGTT 59.547 50.000 5.56 0.00 0.00 2.66
2248 2334 0.452987 TTATACCGTCGCGCTGAAGT 59.547 50.000 5.56 8.38 0.00 3.01
2249 2335 1.121240 CTTATACCGTCGCGCTGAAG 58.879 55.000 5.56 7.01 0.00 3.02
2250 2336 0.734309 TCTTATACCGTCGCGCTGAA 59.266 50.000 5.56 0.00 0.00 3.02
2251 2337 0.028505 GTCTTATACCGTCGCGCTGA 59.971 55.000 5.56 1.08 0.00 4.26
2252 2338 0.029035 AGTCTTATACCGTCGCGCTG 59.971 55.000 5.56 0.00 0.00 5.18
2253 2339 1.530293 CTAGTCTTATACCGTCGCGCT 59.470 52.381 5.56 0.00 0.00 5.92
2254 2340 1.262683 ACTAGTCTTATACCGTCGCGC 59.737 52.381 0.00 0.00 0.00 6.86
2255 2341 2.541346 TGACTAGTCTTATACCGTCGCG 59.459 50.000 23.01 0.00 33.78 5.87
2256 2342 3.310774 TGTGACTAGTCTTATACCGTCGC 59.689 47.826 23.01 1.58 38.78 5.19
2257 2343 4.569966 ACTGTGACTAGTCTTATACCGTCG 59.430 45.833 23.01 5.24 33.78 5.12
2258 2344 5.220815 CCACTGTGACTAGTCTTATACCGTC 60.221 48.000 23.01 4.23 32.46 4.79
2259 2345 4.639310 CCACTGTGACTAGTCTTATACCGT 59.361 45.833 23.01 12.27 0.00 4.83
2260 2346 4.880120 TCCACTGTGACTAGTCTTATACCG 59.120 45.833 23.01 11.68 0.00 4.02
2261 2347 6.963083 ATCCACTGTGACTAGTCTTATACC 57.037 41.667 23.01 5.58 0.00 2.73
2262 2348 8.680039 ACTATCCACTGTGACTAGTCTTATAC 57.320 38.462 23.01 13.35 0.00 1.47
2264 2350 9.122779 GTTACTATCCACTGTGACTAGTCTTAT 57.877 37.037 23.01 4.28 0.00 1.73
2265 2351 8.327271 AGTTACTATCCACTGTGACTAGTCTTA 58.673 37.037 23.01 11.22 32.48 2.10
2266 2352 7.176490 AGTTACTATCCACTGTGACTAGTCTT 58.824 38.462 23.01 3.04 32.48 3.01
2267 2353 6.723339 AGTTACTATCCACTGTGACTAGTCT 58.277 40.000 23.01 12.00 32.48 3.24
2268 2354 7.393841 AAGTTACTATCCACTGTGACTAGTC 57.606 40.000 16.32 16.32 32.96 2.59
2269 2355 8.327271 TCTAAGTTACTATCCACTGTGACTAGT 58.673 37.037 19.20 19.20 32.96 2.57
2270 2356 8.614346 GTCTAAGTTACTATCCACTGTGACTAG 58.386 40.741 9.86 11.39 32.96 2.57
2271 2357 8.327271 AGTCTAAGTTACTATCCACTGTGACTA 58.673 37.037 9.86 0.00 35.96 2.59
2272 2358 7.176490 AGTCTAAGTTACTATCCACTGTGACT 58.824 38.462 9.86 0.00 35.08 3.41
2273 2359 7.393841 AGTCTAAGTTACTATCCACTGTGAC 57.606 40.000 9.86 0.00 0.00 3.67
2274 2360 8.327271 ACTAGTCTAAGTTACTATCCACTGTGA 58.673 37.037 9.86 0.00 0.00 3.58
2275 2361 8.508883 ACTAGTCTAAGTTACTATCCACTGTG 57.491 38.462 0.00 0.00 0.00 3.66
2281 2367 9.896263 GCATGTTACTAGTCTAAGTTACTATCC 57.104 37.037 0.00 0.00 31.82 2.59
2288 2374 9.751542 GACATATGCATGTTACTAGTCTAAGTT 57.248 33.333 10.16 0.00 45.58 2.66
2289 2375 8.914011 TGACATATGCATGTTACTAGTCTAAGT 58.086 33.333 10.16 0.00 45.58 2.24
2290 2376 9.186323 GTGACATATGCATGTTACTAGTCTAAG 57.814 37.037 10.16 0.00 45.58 2.18
2299 2385 9.133627 CATAGACTAGTGACATATGCATGTTAC 57.866 37.037 10.16 8.36 45.58 2.50
2300 2386 8.860088 ACATAGACTAGTGACATATGCATGTTA 58.140 33.333 10.16 0.00 45.58 2.41
2301 2387 7.730084 ACATAGACTAGTGACATATGCATGTT 58.270 34.615 10.16 0.00 45.58 2.71
2303 2389 9.133627 GTAACATAGACTAGTGACATATGCATG 57.866 37.037 10.16 0.00 38.21 4.06
2304 2390 9.083422 AGTAACATAGACTAGTGACATATGCAT 57.917 33.333 3.79 3.79 0.00 3.96
2305 2391 8.465273 AGTAACATAGACTAGTGACATATGCA 57.535 34.615 0.00 0.00 0.00 3.96
2306 2392 9.828852 GTAGTAACATAGACTAGTGACATATGC 57.171 37.037 0.00 0.00 30.08 3.14
2310 2396 9.476928 AAAGGTAGTAACATAGACTAGTGACAT 57.523 33.333 0.00 0.00 30.08 3.06
2311 2397 8.874744 AAAGGTAGTAACATAGACTAGTGACA 57.125 34.615 0.00 0.00 30.08 3.58
2328 2414 9.152327 GGTAGTACTTCCCAATATAAAGGTAGT 57.848 37.037 7.29 0.00 0.00 2.73
2329 2415 9.377238 AGGTAGTACTTCCCAATATAAAGGTAG 57.623 37.037 14.44 0.00 0.00 3.18
2330 2416 9.372189 GAGGTAGTACTTCCCAATATAAAGGTA 57.628 37.037 14.44 0.00 0.00 3.08
2331 2417 7.291885 GGAGGTAGTACTTCCCAATATAAAGGT 59.708 40.741 18.53 0.00 38.32 3.50
2332 2418 7.513091 AGGAGGTAGTACTTCCCAATATAAAGG 59.487 40.741 23.96 0.00 44.66 3.11
2333 2419 8.493787 AGGAGGTAGTACTTCCCAATATAAAG 57.506 38.462 23.96 0.00 44.66 1.85
2334 2420 8.865244 AAGGAGGTAGTACTTCCCAATATAAA 57.135 34.615 23.96 0.00 44.66 1.40
2335 2421 8.294690 AGAAGGAGGTAGTACTTCCCAATATAA 58.705 37.037 23.96 0.00 44.66 0.98
2336 2422 7.834046 AGAAGGAGGTAGTACTTCCCAATATA 58.166 38.462 23.96 0.00 44.66 0.86
2337 2423 6.694611 AGAAGGAGGTAGTACTTCCCAATAT 58.305 40.000 23.96 8.78 44.66 1.28
2338 2424 6.101274 AGAAGGAGGTAGTACTTCCCAATA 57.899 41.667 23.96 0.00 44.66 1.90
2339 2425 4.961585 AGAAGGAGGTAGTACTTCCCAAT 58.038 43.478 23.96 13.16 44.66 3.16
2340 2426 4.351127 GAGAAGGAGGTAGTACTTCCCAA 58.649 47.826 23.96 0.00 44.66 4.12
2341 2427 3.624205 CGAGAAGGAGGTAGTACTTCCCA 60.624 52.174 23.96 0.00 44.66 4.37
2342 2428 2.950975 CGAGAAGGAGGTAGTACTTCCC 59.049 54.545 23.96 12.37 44.66 3.97
2343 2429 2.950975 CCGAGAAGGAGGTAGTACTTCC 59.049 54.545 21.03 21.03 43.98 3.46
2344 2430 3.377798 CACCGAGAAGGAGGTAGTACTTC 59.622 52.174 0.00 3.85 45.00 3.01
2345 2431 3.009916 TCACCGAGAAGGAGGTAGTACTT 59.990 47.826 0.00 0.00 45.00 2.24
2346 2432 2.575279 TCACCGAGAAGGAGGTAGTACT 59.425 50.000 0.00 0.00 45.00 2.73
2347 2433 2.996631 TCACCGAGAAGGAGGTAGTAC 58.003 52.381 0.00 0.00 45.00 2.73
2348 2434 3.726557 TTCACCGAGAAGGAGGTAGTA 57.273 47.619 0.00 0.00 45.00 1.82
2349 2435 2.599408 TTCACCGAGAAGGAGGTAGT 57.401 50.000 0.00 0.00 45.00 2.73
2350 2436 4.645588 ACTTATTCACCGAGAAGGAGGTAG 59.354 45.833 0.00 0.00 45.00 3.18
2351 2437 4.607239 ACTTATTCACCGAGAAGGAGGTA 58.393 43.478 0.00 0.00 45.00 3.08
2352 2438 3.442076 ACTTATTCACCGAGAAGGAGGT 58.558 45.455 0.00 0.00 45.00 3.85
2353 2439 3.447586 TGACTTATTCACCGAGAAGGAGG 59.552 47.826 0.00 0.00 45.00 4.30
2354 2440 4.720649 TGACTTATTCACCGAGAAGGAG 57.279 45.455 0.00 0.00 45.00 3.69
2355 2441 5.661458 GAATGACTTATTCACCGAGAAGGA 58.339 41.667 0.00 0.00 43.79 3.36
2356 2442 5.975410 GAATGACTTATTCACCGAGAAGG 57.025 43.478 0.00 0.00 43.79 3.46
2369 2455 9.338622 TCGATCTAGAACTATGTGAATGACTTA 57.661 33.333 0.00 0.00 0.00 2.24
2370 2456 8.132362 GTCGATCTAGAACTATGTGAATGACTT 58.868 37.037 0.00 0.00 0.00 3.01
2371 2457 7.500892 AGTCGATCTAGAACTATGTGAATGACT 59.499 37.037 0.00 0.00 0.00 3.41
2372 2458 7.644490 AGTCGATCTAGAACTATGTGAATGAC 58.356 38.462 0.00 0.00 0.00 3.06
2373 2459 7.809546 AGTCGATCTAGAACTATGTGAATGA 57.190 36.000 0.00 0.00 0.00 2.57
2498 2584 9.831737 GGTCATCGATTTGAGGAAATAAATATG 57.168 33.333 0.00 0.00 39.46 1.78
2499 2585 9.799106 AGGTCATCGATTTGAGGAAATAAATAT 57.201 29.630 0.00 0.00 39.46 1.28
2501 2587 9.627123 TTAGGTCATCGATTTGAGGAAATAAAT 57.373 29.630 0.00 0.00 39.46 1.40
2502 2588 9.456147 TTTAGGTCATCGATTTGAGGAAATAAA 57.544 29.630 0.00 0.00 39.46 1.40
2503 2589 9.456147 TTTTAGGTCATCGATTTGAGGAAATAA 57.544 29.630 0.00 0.00 39.46 1.40
2504 2590 8.889717 GTTTTAGGTCATCGATTTGAGGAAATA 58.110 33.333 0.00 0.00 39.46 1.40
2505 2591 7.611855 AGTTTTAGGTCATCGATTTGAGGAAAT 59.388 33.333 0.00 0.00 39.46 2.17
2506 2592 6.940298 AGTTTTAGGTCATCGATTTGAGGAAA 59.060 34.615 0.00 0.00 39.46 3.13
2507 2593 6.472887 AGTTTTAGGTCATCGATTTGAGGAA 58.527 36.000 0.00 0.00 39.46 3.36
2508 2594 6.049955 AGTTTTAGGTCATCGATTTGAGGA 57.950 37.500 0.00 0.00 34.44 3.71
2509 2595 6.019801 CGTAGTTTTAGGTCATCGATTTGAGG 60.020 42.308 0.00 0.00 0.00 3.86
2510 2596 6.508088 GCGTAGTTTTAGGTCATCGATTTGAG 60.508 42.308 0.00 0.00 0.00 3.02
2511 2597 5.290158 GCGTAGTTTTAGGTCATCGATTTGA 59.710 40.000 0.00 0.00 0.00 2.69
2512 2598 5.490213 GCGTAGTTTTAGGTCATCGATTTG 58.510 41.667 0.00 0.00 0.00 2.32
2513 2599 4.266976 CGCGTAGTTTTAGGTCATCGATTT 59.733 41.667 0.00 0.00 0.00 2.17
2514 2600 3.795101 CGCGTAGTTTTAGGTCATCGATT 59.205 43.478 0.00 0.00 0.00 3.34
2515 2601 3.065786 TCGCGTAGTTTTAGGTCATCGAT 59.934 43.478 5.77 0.00 0.00 3.59
2516 2602 2.419673 TCGCGTAGTTTTAGGTCATCGA 59.580 45.455 5.77 0.00 0.00 3.59
2517 2603 2.789208 TCGCGTAGTTTTAGGTCATCG 58.211 47.619 5.77 0.00 0.00 3.84
2518 2604 4.802039 TCATTCGCGTAGTTTTAGGTCATC 59.198 41.667 5.77 0.00 0.00 2.92
2519 2605 4.565564 GTCATTCGCGTAGTTTTAGGTCAT 59.434 41.667 5.77 0.00 0.00 3.06
2520 2606 3.922240 GTCATTCGCGTAGTTTTAGGTCA 59.078 43.478 5.77 0.00 0.00 4.02
2521 2607 4.171754 AGTCATTCGCGTAGTTTTAGGTC 58.828 43.478 5.77 0.00 0.00 3.85
2522 2608 4.184079 AGTCATTCGCGTAGTTTTAGGT 57.816 40.909 5.77 0.00 0.00 3.08
2523 2609 6.823678 ATAAGTCATTCGCGTAGTTTTAGG 57.176 37.500 5.77 0.00 0.00 2.69
2524 2610 7.839837 GTGAATAAGTCATTCGCGTAGTTTTAG 59.160 37.037 5.77 0.00 45.25 1.85
2525 2611 7.669098 GTGAATAAGTCATTCGCGTAGTTTTA 58.331 34.615 5.77 0.20 45.25 1.52
2526 2612 6.531439 GTGAATAAGTCATTCGCGTAGTTTT 58.469 36.000 5.77 0.00 45.25 2.43
2527 2613 6.091123 GTGAATAAGTCATTCGCGTAGTTT 57.909 37.500 5.77 0.00 45.25 2.66
2528 2614 5.697848 GTGAATAAGTCATTCGCGTAGTT 57.302 39.130 5.77 2.59 45.25 2.24
2535 2621 4.421058 TGTCTCGGTGAATAAGTCATTCG 58.579 43.478 0.00 0.00 45.25 3.34
2536 2622 4.806247 CCTGTCTCGGTGAATAAGTCATTC 59.194 45.833 0.00 0.00 43.01 2.67
2537 2623 4.383118 CCCTGTCTCGGTGAATAAGTCATT 60.383 45.833 0.00 0.00 38.90 2.57
2538 2624 3.133003 CCCTGTCTCGGTGAATAAGTCAT 59.867 47.826 0.00 0.00 38.90 3.06
2539 2625 2.496070 CCCTGTCTCGGTGAATAAGTCA 59.504 50.000 0.00 0.00 0.00 3.41
2540 2626 2.159085 CCCCTGTCTCGGTGAATAAGTC 60.159 54.545 0.00 0.00 0.00 3.01
2541 2627 1.831736 CCCCTGTCTCGGTGAATAAGT 59.168 52.381 0.00 0.00 0.00 2.24
2542 2628 1.831736 ACCCCTGTCTCGGTGAATAAG 59.168 52.381 0.00 0.00 0.00 1.73
2543 2629 1.946984 ACCCCTGTCTCGGTGAATAA 58.053 50.000 0.00 0.00 0.00 1.40
2544 2630 2.024655 ACTACCCCTGTCTCGGTGAATA 60.025 50.000 0.00 0.00 33.36 1.75
2545 2631 1.273098 ACTACCCCTGTCTCGGTGAAT 60.273 52.381 0.00 0.00 33.36 2.57
2546 2632 0.113776 ACTACCCCTGTCTCGGTGAA 59.886 55.000 0.00 0.00 33.36 3.18
2547 2633 0.994247 TACTACCCCTGTCTCGGTGA 59.006 55.000 0.00 0.00 33.36 4.02
2548 2634 1.475682 GTTACTACCCCTGTCTCGGTG 59.524 57.143 0.00 0.00 33.36 4.94
2549 2635 1.076024 TGTTACTACCCCTGTCTCGGT 59.924 52.381 0.00 0.00 36.08 4.69
2550 2636 1.843368 TGTTACTACCCCTGTCTCGG 58.157 55.000 0.00 0.00 0.00 4.63
2551 2637 4.583489 ACATATGTTACTACCCCTGTCTCG 59.417 45.833 1.41 0.00 0.00 4.04
2552 2638 5.597182 TCACATATGTTACTACCCCTGTCTC 59.403 44.000 5.37 0.00 0.00 3.36
2553 2639 5.525484 TCACATATGTTACTACCCCTGTCT 58.475 41.667 5.37 0.00 0.00 3.41
2554 2640 5.221461 CCTCACATATGTTACTACCCCTGTC 60.221 48.000 5.37 0.00 0.00 3.51
2555 2641 4.654262 CCTCACATATGTTACTACCCCTGT 59.346 45.833 5.37 0.00 0.00 4.00
2556 2642 4.654262 ACCTCACATATGTTACTACCCCTG 59.346 45.833 5.37 0.00 0.00 4.45
2557 2643 4.654262 CACCTCACATATGTTACTACCCCT 59.346 45.833 5.37 0.00 0.00 4.79
2558 2644 4.407945 ACACCTCACATATGTTACTACCCC 59.592 45.833 5.37 0.00 0.00 4.95
2559 2645 5.128171 TGACACCTCACATATGTTACTACCC 59.872 44.000 5.37 0.00 0.00 3.69
2560 2646 6.216801 TGACACCTCACATATGTTACTACC 57.783 41.667 5.37 0.00 0.00 3.18
2561 2647 6.201044 GCATGACACCTCACATATGTTACTAC 59.799 42.308 5.37 0.00 0.00 2.73
2562 2648 6.127196 TGCATGACACCTCACATATGTTACTA 60.127 38.462 5.37 0.00 0.00 1.82
2563 2649 5.118990 GCATGACACCTCACATATGTTACT 58.881 41.667 5.37 0.00 0.00 2.24
2564 2650 4.875536 TGCATGACACCTCACATATGTTAC 59.124 41.667 5.37 0.00 0.00 2.50
2565 2651 5.096443 TGCATGACACCTCACATATGTTA 57.904 39.130 5.37 0.00 0.00 2.41
2566 2652 3.954200 TGCATGACACCTCACATATGTT 58.046 40.909 5.37 0.00 0.00 2.71
2567 2653 3.632643 TGCATGACACCTCACATATGT 57.367 42.857 1.41 1.41 0.00 2.29
2568 2654 5.993441 TCTATTGCATGACACCTCACATATG 59.007 40.000 0.00 0.00 0.00 1.78
2569 2655 6.178607 TCTATTGCATGACACCTCACATAT 57.821 37.500 0.00 0.00 0.00 1.78
2570 2656 5.612725 TCTATTGCATGACACCTCACATA 57.387 39.130 0.00 0.00 0.00 2.29
2571 2657 4.492494 TCTATTGCATGACACCTCACAT 57.508 40.909 0.00 0.00 0.00 3.21
2572 2658 3.979101 TCTATTGCATGACACCTCACA 57.021 42.857 0.00 0.00 0.00 3.58
2573 2659 4.445453 TGATCTATTGCATGACACCTCAC 58.555 43.478 0.00 0.00 0.00 3.51
2574 2660 4.758773 TGATCTATTGCATGACACCTCA 57.241 40.909 0.00 0.00 0.00 3.86
2575 2661 6.630444 AAATGATCTATTGCATGACACCTC 57.370 37.500 0.00 0.00 0.00 3.85
2576 2662 8.701908 AATAAATGATCTATTGCATGACACCT 57.298 30.769 0.00 0.00 0.00 4.00
2579 2665 9.797642 ACCTAATAAATGATCTATTGCATGACA 57.202 29.630 0.00 0.00 0.00 3.58
2600 2686 9.475620 TCAAGACAAGATGAGTCTATAACCTAA 57.524 33.333 0.00 0.00 45.11 2.69
2601 2687 9.647918 ATCAAGACAAGATGAGTCTATAACCTA 57.352 33.333 0.00 0.00 45.11 3.08
2602 2688 7.962995 TCAAGACAAGATGAGTCTATAACCT 57.037 36.000 0.00 0.00 45.11 3.50
2603 2689 9.685828 GTATCAAGACAAGATGAGTCTATAACC 57.314 37.037 0.00 0.00 45.11 2.85
2604 2690 9.388346 CGTATCAAGACAAGATGAGTCTATAAC 57.612 37.037 0.00 0.00 45.11 1.89
2605 2691 9.121658 ACGTATCAAGACAAGATGAGTCTATAA 57.878 33.333 0.00 0.00 45.11 0.98
2606 2692 8.560374 CACGTATCAAGACAAGATGAGTCTATA 58.440 37.037 0.00 0.00 45.11 1.31
2607 2693 7.067615 ACACGTATCAAGACAAGATGAGTCTAT 59.932 37.037 0.00 0.00 45.11 1.98
2608 2694 6.374613 ACACGTATCAAGACAAGATGAGTCTA 59.625 38.462 0.00 0.00 45.11 2.59
2610 2696 5.287274 CACACGTATCAAGACAAGATGAGTC 59.713 44.000 0.00 0.00 36.26 3.36
2611 2697 5.048013 TCACACGTATCAAGACAAGATGAGT 60.048 40.000 0.00 0.00 0.00 3.41
2612 2698 5.402398 TCACACGTATCAAGACAAGATGAG 58.598 41.667 0.00 0.00 0.00 2.90
2613 2699 5.385509 TCACACGTATCAAGACAAGATGA 57.614 39.130 0.00 0.00 0.00 2.92
2614 2700 5.578336 ACATCACACGTATCAAGACAAGATG 59.422 40.000 0.00 0.00 36.24 2.90
2615 2701 5.724328 ACATCACACGTATCAAGACAAGAT 58.276 37.500 0.00 0.00 0.00 2.40
2616 2702 5.134202 ACATCACACGTATCAAGACAAGA 57.866 39.130 0.00 0.00 0.00 3.02
2617 2703 5.845985 AACATCACACGTATCAAGACAAG 57.154 39.130 0.00 0.00 0.00 3.16
2618 2704 6.217294 TGTAACATCACACGTATCAAGACAA 58.783 36.000 0.00 0.00 0.00 3.18
2619 2705 5.774630 TGTAACATCACACGTATCAAGACA 58.225 37.500 0.00 0.00 0.00 3.41
2620 2706 5.862323 ACTGTAACATCACACGTATCAAGAC 59.138 40.000 0.00 0.00 0.00 3.01
2621 2707 6.020971 ACTGTAACATCACACGTATCAAGA 57.979 37.500 0.00 0.00 0.00 3.02
2622 2708 7.541091 AGTTACTGTAACATCACACGTATCAAG 59.459 37.037 27.12 0.00 41.07 3.02
2623 2709 7.372714 AGTTACTGTAACATCACACGTATCAA 58.627 34.615 27.12 0.00 41.07 2.57
2624 2710 6.916440 AGTTACTGTAACATCACACGTATCA 58.084 36.000 27.12 0.00 41.07 2.15
2625 2711 8.180267 ACTAGTTACTGTAACATCACACGTATC 58.820 37.037 27.12 1.55 41.07 2.24
2626 2712 8.048534 ACTAGTTACTGTAACATCACACGTAT 57.951 34.615 27.12 9.43 41.07 3.06
2627 2713 7.439157 ACTAGTTACTGTAACATCACACGTA 57.561 36.000 27.12 11.12 41.07 3.57
2628 2714 6.323203 ACTAGTTACTGTAACATCACACGT 57.677 37.500 27.12 10.64 41.07 4.49
2629 2715 8.795341 CATAACTAGTTACTGTAACATCACACG 58.205 37.037 27.12 10.87 41.07 4.49
2630 2716 9.635520 ACATAACTAGTTACTGTAACATCACAC 57.364 33.333 27.12 4.72 41.07 3.82
2655 2741 2.092323 GAAAGAGGGGCATGTGGTAAC 58.908 52.381 0.00 0.00 0.00 2.50
2656 2742 1.005450 GGAAAGAGGGGCATGTGGTAA 59.995 52.381 0.00 0.00 0.00 2.85
2657 2743 0.623723 GGAAAGAGGGGCATGTGGTA 59.376 55.000 0.00 0.00 0.00 3.25
2658 2744 1.142688 AGGAAAGAGGGGCATGTGGT 61.143 55.000 0.00 0.00 0.00 4.16
2659 2745 0.394899 GAGGAAAGAGGGGCATGTGG 60.395 60.000 0.00 0.00 0.00 4.17
2660 2746 0.329261 TGAGGAAAGAGGGGCATGTG 59.671 55.000 0.00 0.00 0.00 3.21
2661 2747 1.302907 ATGAGGAAAGAGGGGCATGT 58.697 50.000 0.00 0.00 0.00 3.21
2662 2748 2.449137 AATGAGGAAAGAGGGGCATG 57.551 50.000 0.00 0.00 0.00 4.06
2663 2749 3.126453 AGTAATGAGGAAAGAGGGGCAT 58.874 45.455 0.00 0.00 0.00 4.40
2664 2750 2.505819 GAGTAATGAGGAAAGAGGGGCA 59.494 50.000 0.00 0.00 0.00 5.36
2665 2751 2.158740 GGAGTAATGAGGAAAGAGGGGC 60.159 54.545 0.00 0.00 0.00 5.80
2666 2752 3.847671 GGAGTAATGAGGAAAGAGGGG 57.152 52.381 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.