Multiple sequence alignment - TraesCS1A01G289500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G289500 chr1A 100.000 3413 0 0 1 3413 486698264 486694852 0.000000e+00 6303
1 TraesCS1A01G289500 chr1B 93.119 1744 94 15 787 2521 520362721 520360995 0.000000e+00 2532
2 TraesCS1A01G289500 chr1B 86.176 680 84 8 1245 1920 641621607 641620934 0.000000e+00 726
3 TraesCS1A01G289500 chr1B 98.374 123 2 0 2505 2627 520359606 520359484 2.060000e-52 217
4 TraesCS1A01G289500 chr1D 93.016 902 59 2 1403 2303 386937031 386936133 0.000000e+00 1314
5 TraesCS1A01G289500 chr1D 95.705 745 29 3 1 744 60171078 60171820 0.000000e+00 1195
6 TraesCS1A01G289500 chr1D 95.687 742 30 2 1 741 205133959 205134699 0.000000e+00 1192
7 TraesCS1A01G289500 chr1D 95.405 740 33 1 1 739 247505020 247505759 0.000000e+00 1177
8 TraesCS1A01G289500 chr1D 96.137 466 17 1 942 1407 386937570 386937106 0.000000e+00 760
9 TraesCS1A01G289500 chr1D 83.567 785 97 15 1002 1774 464858435 464857671 0.000000e+00 706
10 TraesCS1A01G289500 chr1D 84.375 672 82 12 1796 2465 464857683 464857033 3.710000e-179 638
11 TraesCS1A01G289500 chr1D 87.579 475 51 3 2765 3232 104565983 104565510 8.330000e-151 544
12 TraesCS1A01G289500 chr1D 92.977 299 20 1 2335 2632 386904625 386904327 5.230000e-118 435
13 TraesCS1A01G289500 chr1D 85.514 214 13 5 753 966 386939869 386939674 1.240000e-49 207
14 TraesCS1A01G289500 chr1D 90.780 141 10 1 3230 3370 5462481 5462344 5.820000e-43 185
15 TraesCS1A01G289500 chr7D 95.213 752 32 4 4 754 497561640 497560892 0.000000e+00 1186
16 TraesCS1A01G289500 chr7D 86.994 469 57 4 2765 3232 563605753 563605288 3.020000e-145 525
17 TraesCS1A01G289500 chr7D 93.007 143 10 0 3228 3370 131823636 131823778 3.450000e-50 209
18 TraesCS1A01G289500 chr7D 90.728 151 11 3 3228 3377 575343729 575343581 7.470000e-47 198
19 TraesCS1A01G289500 chr3D 95.547 741 31 2 1 740 584700654 584701393 0.000000e+00 1184
20 TraesCS1A01G289500 chr3D 86.624 471 57 5 2765 3232 611503085 611502618 1.820000e-142 516
21 TraesCS1A01G289500 chr2D 95.541 740 32 1 1 739 73126134 73126873 0.000000e+00 1182
22 TraesCS1A01G289500 chr2D 86.170 470 62 3 2765 3232 650719184 650718716 3.930000e-139 505
23 TraesCS1A01G289500 chr6D 94.452 757 38 4 1 754 142135954 142136709 0.000000e+00 1162
24 TraesCS1A01G289500 chr6D 94.892 744 34 3 1 742 57790405 57791146 0.000000e+00 1160
25 TraesCS1A01G289500 chr6D 79.805 1233 198 20 1202 2420 23632064 23630869 0.000000e+00 850
26 TraesCS1A01G289500 chr6D 79.767 1201 195 26 1229 2417 23642078 23640914 0.000000e+00 828
27 TraesCS1A01G289500 chr6D 79.409 947 151 24 1458 2400 23748587 23747681 2.240000e-176 628
28 TraesCS1A01G289500 chr6D 81.732 739 115 11 1669 2403 81738563 81737841 1.750000e-167 599
29 TraesCS1A01G289500 chr6D 86.266 466 64 0 2767 3232 45814193 45814658 1.090000e-139 507
30 TraesCS1A01G289500 chr6D 86.141 469 63 2 2765 3232 103039386 103038919 3.930000e-139 505
31 TraesCS1A01G289500 chr7B 94.533 750 39 2 1 749 720162652 720163400 0.000000e+00 1157
32 TraesCS1A01G289500 chr6A 82.084 1161 161 22 1259 2406 22171958 22173084 0.000000e+00 948
33 TraesCS1A01G289500 chr6A 80.293 1228 194 18 1202 2417 22193376 22192185 0.000000e+00 883
34 TraesCS1A01G289500 chr6A 81.622 740 117 12 1669 2403 98187421 98186696 2.270000e-166 595
35 TraesCS1A01G289500 chr6B 81.784 1054 160 15 1233 2280 46654085 46655112 0.000000e+00 854
36 TraesCS1A01G289500 chr6B 79.699 1197 195 24 1233 2417 37652841 37651681 0.000000e+00 821
37 TraesCS1A01G289500 chr6B 79.040 1250 201 21 1187 2414 37035547 37036757 0.000000e+00 800
38 TraesCS1A01G289500 chr6B 80.405 740 123 13 1669 2403 156404724 156404002 8.330000e-151 544
39 TraesCS1A01G289500 chr6B 77.156 893 168 17 1537 2417 38565225 38564357 1.420000e-133 486
40 TraesCS1A01G289500 chr2A 87.742 465 56 1 2767 3231 384989947 384989484 3.000000e-150 542
41 TraesCS1A01G289500 chr2A 93.617 141 9 0 3230 3370 75292939 75293079 9.600000e-51 211
42 TraesCS1A01G289500 chr2B 86.752 468 60 2 2765 3232 461605522 461605057 1.400000e-143 520
43 TraesCS1A01G289500 chr7A 86.481 466 62 1 2768 3232 194790034 194789569 8.450000e-141 510
44 TraesCS1A01G289500 chr7A 86.232 138 17 1 3233 3370 38116255 38116120 7.630000e-32 148
45 TraesCS1A01G289500 chr5D 92.806 139 9 1 3230 3368 385694729 385694866 2.080000e-47 200
46 TraesCS1A01G289500 chr4B 89.362 141 15 0 3230 3370 546574508 546574648 9.730000e-41 178
47 TraesCS1A01G289500 chr4B 86.429 140 19 0 3230 3369 616805604 616805743 1.640000e-33 154
48 TraesCS1A01G289500 chr4A 88.406 138 12 3 3233 3368 730695014 730694879 2.730000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G289500 chr1A 486694852 486698264 3412 True 6303.000000 6303 100.000000 1 3413 1 chr1A.!!$R1 3412
1 TraesCS1A01G289500 chr1B 520359484 520362721 3237 True 1374.500000 2532 95.746500 787 2627 2 chr1B.!!$R2 1840
2 TraesCS1A01G289500 chr1B 641620934 641621607 673 True 726.000000 726 86.176000 1245 1920 1 chr1B.!!$R1 675
3 TraesCS1A01G289500 chr1D 60171078 60171820 742 False 1195.000000 1195 95.705000 1 744 1 chr1D.!!$F1 743
4 TraesCS1A01G289500 chr1D 205133959 205134699 740 False 1192.000000 1192 95.687000 1 741 1 chr1D.!!$F2 740
5 TraesCS1A01G289500 chr1D 247505020 247505759 739 False 1177.000000 1177 95.405000 1 739 1 chr1D.!!$F3 738
6 TraesCS1A01G289500 chr1D 386936133 386939869 3736 True 760.333333 1314 91.555667 753 2303 3 chr1D.!!$R4 1550
7 TraesCS1A01G289500 chr1D 464857033 464858435 1402 True 672.000000 706 83.971000 1002 2465 2 chr1D.!!$R5 1463
8 TraesCS1A01G289500 chr7D 497560892 497561640 748 True 1186.000000 1186 95.213000 4 754 1 chr7D.!!$R1 750
9 TraesCS1A01G289500 chr3D 584700654 584701393 739 False 1184.000000 1184 95.547000 1 740 1 chr3D.!!$F1 739
10 TraesCS1A01G289500 chr2D 73126134 73126873 739 False 1182.000000 1182 95.541000 1 739 1 chr2D.!!$F1 738
11 TraesCS1A01G289500 chr6D 142135954 142136709 755 False 1162.000000 1162 94.452000 1 754 1 chr6D.!!$F3 753
12 TraesCS1A01G289500 chr6D 57790405 57791146 741 False 1160.000000 1160 94.892000 1 742 1 chr6D.!!$F2 741
13 TraesCS1A01G289500 chr6D 23630869 23632064 1195 True 850.000000 850 79.805000 1202 2420 1 chr6D.!!$R1 1218
14 TraesCS1A01G289500 chr6D 23640914 23642078 1164 True 828.000000 828 79.767000 1229 2417 1 chr6D.!!$R2 1188
15 TraesCS1A01G289500 chr6D 23747681 23748587 906 True 628.000000 628 79.409000 1458 2400 1 chr6D.!!$R3 942
16 TraesCS1A01G289500 chr6D 81737841 81738563 722 True 599.000000 599 81.732000 1669 2403 1 chr6D.!!$R4 734
17 TraesCS1A01G289500 chr7B 720162652 720163400 748 False 1157.000000 1157 94.533000 1 749 1 chr7B.!!$F1 748
18 TraesCS1A01G289500 chr6A 22171958 22173084 1126 False 948.000000 948 82.084000 1259 2406 1 chr6A.!!$F1 1147
19 TraesCS1A01G289500 chr6A 22192185 22193376 1191 True 883.000000 883 80.293000 1202 2417 1 chr6A.!!$R1 1215
20 TraesCS1A01G289500 chr6A 98186696 98187421 725 True 595.000000 595 81.622000 1669 2403 1 chr6A.!!$R2 734
21 TraesCS1A01G289500 chr6B 46654085 46655112 1027 False 854.000000 854 81.784000 1233 2280 1 chr6B.!!$F2 1047
22 TraesCS1A01G289500 chr6B 37651681 37652841 1160 True 821.000000 821 79.699000 1233 2417 1 chr6B.!!$R1 1184
23 TraesCS1A01G289500 chr6B 37035547 37036757 1210 False 800.000000 800 79.040000 1187 2414 1 chr6B.!!$F1 1227
24 TraesCS1A01G289500 chr6B 156404002 156404724 722 True 544.000000 544 80.405000 1669 2403 1 chr6B.!!$R3 734
25 TraesCS1A01G289500 chr6B 38564357 38565225 868 True 486.000000 486 77.156000 1537 2417 1 chr6B.!!$R2 880

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
138 139 0.249489 GTCCTGCGCATCGTATCCTT 60.249 55.000 12.24 0.0 0.0 3.36 F
1166 3303 1.004745 CCCTTACAGTTCCAGCCATGT 59.995 52.381 0.00 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2136 4403 1.291877 CTTCGAAAGCCCTGGTGACG 61.292 60.0 0.00 0.0 0.00 4.35 R
3016 6706 0.036765 GCTACACCACCGGTCATGAA 60.037 55.0 19.23 0.0 31.02 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 5.480422 GTCCAAAATTTAGTCTGGATTGGGT 59.520 40.000 11.53 0.00 40.03 4.51
138 139 0.249489 GTCCTGCGCATCGTATCCTT 60.249 55.000 12.24 0.00 0.00 3.36
152 153 4.161295 CCTTCATGGAGGCGCCGA 62.161 66.667 23.20 9.13 40.66 5.54
166 168 1.299976 GCCGATTGGGAGGAACTGT 59.700 57.895 0.00 0.00 38.47 3.55
484 488 3.626924 GGCGTGTGACCCAGTCCT 61.627 66.667 0.00 0.00 0.00 3.85
537 541 3.270877 AGATGTTAGGATTTGGTGCGAC 58.729 45.455 0.00 0.00 0.00 5.19
595 599 2.339769 GCATCAAGGGGGTAGGAGTAT 58.660 52.381 0.00 0.00 0.00 2.12
643 647 5.230306 GCTTCAAGCTTACTGATGTACTACG 59.770 44.000 0.71 0.00 38.45 3.51
651 655 7.120285 AGCTTACTGATGTACTACGTTGTAAGA 59.880 37.037 22.93 2.42 37.03 2.10
776 780 1.084370 ATTCAGCCACGTTAGCGAGC 61.084 55.000 5.81 8.28 42.00 5.03
780 784 3.023591 GCCACGTTAGCGAGCAACC 62.024 63.158 5.81 0.00 42.00 3.77
812 816 7.154435 TCTAAGTAAACGAGCTTACTGATGT 57.846 36.000 9.12 0.00 40.47 3.06
835 842 7.224290 GTGTGGTTTTTATTGGTTTACACAC 57.776 36.000 0.00 0.00 45.87 3.82
884 891 5.680594 ATTGATGAGAGATCCTATCCTGC 57.319 43.478 0.00 0.00 0.00 4.85
896 903 2.689983 CCTATCCTGCCATTCACCAAAC 59.310 50.000 0.00 0.00 0.00 2.93
898 905 1.619654 TCCTGCCATTCACCAAACAG 58.380 50.000 0.00 0.00 0.00 3.16
922 929 2.696187 GCTTCTTCTACCTCTACCTGGG 59.304 54.545 0.00 0.00 0.00 4.45
945 952 2.202756 GCCTCGATGGACGGACAC 60.203 66.667 5.24 0.00 42.82 3.67
965 3099 2.224548 ACTGGGCTCAAAGGTCAACTAC 60.225 50.000 0.00 0.00 0.00 2.73
1166 3303 1.004745 CCCTTACAGTTCCAGCCATGT 59.995 52.381 0.00 0.00 0.00 3.21
1917 4166 1.952133 CAAGAACGACGGCGACCAA 60.952 57.895 22.49 0.00 41.64 3.67
1968 4232 2.428085 GCTTCTCCTCCTCCCGGAC 61.428 68.421 0.73 0.00 34.92 4.79
1969 4233 2.044252 TTCTCCTCCTCCCGGACG 60.044 66.667 0.73 0.00 34.92 4.79
1970 4234 3.657038 TTCTCCTCCTCCCGGACGG 62.657 68.421 0.73 3.25 34.92 4.79
2136 4403 2.467826 GGACATGCAGAAGCTCGGC 61.468 63.158 0.00 0.00 42.74 5.54
2202 4472 1.533711 CGGGGATGGGCTCTTCATT 59.466 57.895 1.42 0.00 0.00 2.57
2282 4558 1.671054 CAACGGCCGTGGTCATCTT 60.671 57.895 34.95 10.92 0.00 2.40
2326 4611 2.433491 CGGTGGATTTCGTGGCGA 60.433 61.111 0.00 0.00 0.00 5.54
2370 4655 0.108585 TTGAGGAGAAAACCAGCGCT 59.891 50.000 2.64 2.64 0.00 5.92
2400 4685 1.684983 CTTGGCCATGTGATCAATCCC 59.315 52.381 6.09 0.00 0.00 3.85
2434 4719 3.091545 GCAATTGACTCTGGGATTTGGA 58.908 45.455 10.34 0.00 0.00 3.53
2470 4755 2.971901 AAAGAATTCCGGTGAACCCT 57.028 45.000 0.00 0.00 32.13 4.34
2565 6255 9.778993 GATCATCATGATTAATTTATGTTCCCG 57.221 33.333 5.16 0.00 37.20 5.14
2599 6289 2.441750 TCTGTTGGACAAGTTTAGGCCT 59.558 45.455 11.78 11.78 0.00 5.19
2627 6317 2.954318 CCCCATTGGTGAATAAGCTCTG 59.046 50.000 1.20 0.00 0.00 3.35
2628 6318 3.624777 CCCATTGGTGAATAAGCTCTGT 58.375 45.455 1.20 0.00 0.00 3.41
2629 6319 4.385199 CCCCATTGGTGAATAAGCTCTGTA 60.385 45.833 1.20 0.00 0.00 2.74
2630 6320 5.380043 CCCATTGGTGAATAAGCTCTGTAT 58.620 41.667 1.20 0.00 0.00 2.29
2631 6321 5.829924 CCCATTGGTGAATAAGCTCTGTATT 59.170 40.000 1.20 0.00 0.00 1.89
2632 6322 6.016777 CCCATTGGTGAATAAGCTCTGTATTC 60.017 42.308 8.96 8.96 38.11 1.75
2633 6323 6.769822 CCATTGGTGAATAAGCTCTGTATTCT 59.230 38.462 14.67 0.00 38.33 2.40
2634 6324 7.284034 CCATTGGTGAATAAGCTCTGTATTCTT 59.716 37.037 14.67 0.00 38.33 2.52
2635 6325 8.680903 CATTGGTGAATAAGCTCTGTATTCTTT 58.319 33.333 14.67 0.00 38.33 2.52
2636 6326 9.905713 ATTGGTGAATAAGCTCTGTATTCTTTA 57.094 29.630 14.67 2.57 38.33 1.85
2637 6327 9.905713 TTGGTGAATAAGCTCTGTATTCTTTAT 57.094 29.630 14.67 0.00 38.33 1.40
2638 6328 9.330063 TGGTGAATAAGCTCTGTATTCTTTATG 57.670 33.333 14.67 0.00 38.33 1.90
2639 6329 8.778358 GGTGAATAAGCTCTGTATTCTTTATGG 58.222 37.037 14.67 0.00 38.33 2.74
2640 6330 9.331282 GTGAATAAGCTCTGTATTCTTTATGGT 57.669 33.333 14.67 0.00 38.33 3.55
2641 6331 9.330063 TGAATAAGCTCTGTATTCTTTATGGTG 57.670 33.333 14.67 0.00 38.33 4.17
2642 6332 9.547753 GAATAAGCTCTGTATTCTTTATGGTGA 57.452 33.333 8.72 0.00 35.80 4.02
2643 6333 9.905713 AATAAGCTCTGTATTCTTTATGGTGAA 57.094 29.630 0.00 0.00 0.00 3.18
2646 6336 9.553064 AAGCTCTGTATTCTTTATGGTGAATAG 57.447 33.333 0.00 0.00 36.29 1.73
2647 6337 8.153550 AGCTCTGTATTCTTTATGGTGAATAGG 58.846 37.037 0.00 0.00 36.29 2.57
2648 6338 7.095017 GCTCTGTATTCTTTATGGTGAATAGGC 60.095 40.741 0.00 0.00 36.29 3.93
2649 6339 8.034313 TCTGTATTCTTTATGGTGAATAGGCT 57.966 34.615 0.00 0.00 36.29 4.58
2650 6340 9.154632 TCTGTATTCTTTATGGTGAATAGGCTA 57.845 33.333 0.00 0.00 36.29 3.93
2651 6341 9.950496 CTGTATTCTTTATGGTGAATAGGCTAT 57.050 33.333 0.00 0.00 36.29 2.97
2652 6342 9.725019 TGTATTCTTTATGGTGAATAGGCTATG 57.275 33.333 7.99 0.00 36.29 2.23
2653 6343 9.726438 GTATTCTTTATGGTGAATAGGCTATGT 57.274 33.333 7.99 0.00 36.29 2.29
2655 6345 8.677148 TTCTTTATGGTGAATAGGCTATGTTC 57.323 34.615 7.99 4.37 0.00 3.18
2656 6346 7.801104 TCTTTATGGTGAATAGGCTATGTTCA 58.199 34.615 7.99 7.12 36.75 3.18
2657 6347 8.439971 TCTTTATGGTGAATAGGCTATGTTCAT 58.560 33.333 7.99 11.64 40.61 2.57
2658 6348 7.984422 TTATGGTGAATAGGCTATGTTCATG 57.016 36.000 7.99 0.00 40.61 3.07
2659 6349 4.717877 TGGTGAATAGGCTATGTTCATGG 58.282 43.478 7.99 0.00 40.61 3.66
2660 6350 4.411869 TGGTGAATAGGCTATGTTCATGGA 59.588 41.667 7.99 0.00 40.61 3.41
2661 6351 5.073554 TGGTGAATAGGCTATGTTCATGGAT 59.926 40.000 7.99 0.00 40.61 3.41
2662 6352 5.413833 GGTGAATAGGCTATGTTCATGGATG 59.586 44.000 7.99 0.00 40.61 3.51
2663 6353 5.413833 GTGAATAGGCTATGTTCATGGATGG 59.586 44.000 7.99 0.00 40.61 3.51
2664 6354 5.310331 TGAATAGGCTATGTTCATGGATGGA 59.690 40.000 7.99 0.00 34.45 3.41
2665 6355 3.498774 AGGCTATGTTCATGGATGGAC 57.501 47.619 0.00 0.00 36.81 4.02
2676 6366 8.821686 TGTTCATGGATGGACACTAAATAATT 57.178 30.769 0.00 0.00 41.21 1.40
2677 6367 8.902806 TGTTCATGGATGGACACTAAATAATTC 58.097 33.333 0.00 0.00 41.21 2.17
2678 6368 8.352942 GTTCATGGATGGACACTAAATAATTCC 58.647 37.037 0.00 0.00 36.29 3.01
2679 6369 7.581814 TCATGGATGGACACTAAATAATTCCA 58.418 34.615 0.00 0.00 40.61 3.53
2681 6371 8.863086 CATGGATGGACACTAAATAATTCCATT 58.137 33.333 3.04 0.00 45.27 3.16
2682 6372 8.837099 TGGATGGACACTAAATAATTCCATTT 57.163 30.769 3.04 0.00 45.27 2.32
2683 6373 9.928618 TGGATGGACACTAAATAATTCCATTTA 57.071 29.630 3.04 0.00 45.27 1.40
2699 6389 9.675464 AATTCCATTTACTTTTACCGACTATCA 57.325 29.630 0.00 0.00 0.00 2.15
2700 6390 8.483307 TTCCATTTACTTTTACCGACTATCAC 57.517 34.615 0.00 0.00 0.00 3.06
2701 6391 7.613585 TCCATTTACTTTTACCGACTATCACA 58.386 34.615 0.00 0.00 0.00 3.58
2702 6392 8.262227 TCCATTTACTTTTACCGACTATCACAT 58.738 33.333 0.00 0.00 0.00 3.21
2703 6393 8.548721 CCATTTACTTTTACCGACTATCACATC 58.451 37.037 0.00 0.00 0.00 3.06
2704 6394 9.093970 CATTTACTTTTACCGACTATCACATCA 57.906 33.333 0.00 0.00 0.00 3.07
2705 6395 9.661563 ATTTACTTTTACCGACTATCACATCAA 57.338 29.630 0.00 0.00 0.00 2.57
2706 6396 9.491675 TTTACTTTTACCGACTATCACATCAAA 57.508 29.630 0.00 0.00 0.00 2.69
2707 6397 9.661563 TTACTTTTACCGACTATCACATCAAAT 57.338 29.630 0.00 0.00 0.00 2.32
2708 6398 8.561738 ACTTTTACCGACTATCACATCAAATT 57.438 30.769 0.00 0.00 0.00 1.82
2709 6399 9.661563 ACTTTTACCGACTATCACATCAAATTA 57.338 29.630 0.00 0.00 0.00 1.40
2712 6402 9.438228 TTTACCGACTATCACATCAAATTAACA 57.562 29.630 0.00 0.00 0.00 2.41
2713 6403 7.539712 ACCGACTATCACATCAAATTAACAG 57.460 36.000 0.00 0.00 0.00 3.16
2714 6404 7.327975 ACCGACTATCACATCAAATTAACAGA 58.672 34.615 0.00 0.00 0.00 3.41
2715 6405 7.822334 ACCGACTATCACATCAAATTAACAGAA 59.178 33.333 0.00 0.00 0.00 3.02
2716 6406 8.664798 CCGACTATCACATCAAATTAACAGAAA 58.335 33.333 0.00 0.00 0.00 2.52
2734 6424 8.567285 AACAGAAAACTATACCTGATTGGAAG 57.433 34.615 0.00 0.00 39.71 3.46
2735 6425 7.112779 ACAGAAAACTATACCTGATTGGAAGG 58.887 38.462 0.00 0.00 40.93 3.46
2737 6427 7.611855 CAGAAAACTATACCTGATTGGAAGGTT 59.388 37.037 0.00 0.00 46.14 3.50
2738 6428 8.170730 AGAAAACTATACCTGATTGGAAGGTTT 58.829 33.333 0.00 0.00 46.14 3.27
2739 6429 8.721133 AAAACTATACCTGATTGGAAGGTTTT 57.279 30.769 0.00 0.00 46.14 2.43
2740 6430 9.816787 AAAACTATACCTGATTGGAAGGTTTTA 57.183 29.630 0.00 0.00 46.14 1.52
2741 6431 9.990868 AAACTATACCTGATTGGAAGGTTTTAT 57.009 29.630 0.00 0.00 46.14 1.40
2742 6432 9.628500 AACTATACCTGATTGGAAGGTTTTATC 57.372 33.333 0.00 0.00 46.14 1.75
2743 6433 8.778059 ACTATACCTGATTGGAAGGTTTTATCA 58.222 33.333 0.00 0.00 46.14 2.15
2744 6434 9.627123 CTATACCTGATTGGAAGGTTTTATCAA 57.373 33.333 0.00 0.00 46.14 2.57
2748 6438 9.136323 ACCTGATTGGAAGGTTTTATCAATATC 57.864 33.333 0.00 0.00 46.14 1.63
2749 6439 9.359653 CCTGATTGGAAGGTTTTATCAATATCT 57.640 33.333 0.00 0.00 38.35 1.98
2762 6452 8.812147 TTTATCAATATCTAGTACACAAGGCG 57.188 34.615 0.00 0.00 0.00 5.52
2763 6453 6.650427 ATCAATATCTAGTACACAAGGCGA 57.350 37.500 0.00 0.00 0.00 5.54
2764 6454 5.828747 TCAATATCTAGTACACAAGGCGAC 58.171 41.667 0.00 0.00 0.00 5.19
2765 6455 4.850347 ATATCTAGTACACAAGGCGACC 57.150 45.455 0.00 0.00 0.00 4.79
2766 6456 2.211250 TCTAGTACACAAGGCGACCT 57.789 50.000 0.00 0.00 33.87 3.85
2767 6457 2.089980 TCTAGTACACAAGGCGACCTC 58.910 52.381 0.00 0.00 30.89 3.85
2768 6458 1.134560 CTAGTACACAAGGCGACCTCC 59.865 57.143 0.00 0.00 30.89 4.30
2769 6459 1.079336 GTACACAAGGCGACCTCCC 60.079 63.158 0.00 0.00 30.89 4.30
2770 6460 2.288025 TACACAAGGCGACCTCCCC 61.288 63.158 0.00 0.00 30.89 4.81
2771 6461 2.741878 TACACAAGGCGACCTCCCCT 62.742 60.000 0.00 0.00 30.89 4.79
2772 6462 3.003763 ACAAGGCGACCTCCCCTC 61.004 66.667 0.00 0.00 30.89 4.30
2773 6463 4.148825 CAAGGCGACCTCCCCTCG 62.149 72.222 0.00 0.00 30.89 4.63
2810 6500 4.115199 GCGTCAAGGGCCCCAGAT 62.115 66.667 21.43 0.00 0.00 2.90
2811 6501 2.190578 CGTCAAGGGCCCCAGATC 59.809 66.667 21.43 10.39 0.00 2.75
2812 6502 2.597903 GTCAAGGGCCCCAGATCC 59.402 66.667 21.43 1.75 0.00 3.36
2813 6503 2.696125 TCAAGGGCCCCAGATCCC 60.696 66.667 21.43 0.00 42.94 3.85
2817 6507 3.253061 GGGCCCCAGATCCCTAGC 61.253 72.222 12.23 0.00 39.46 3.42
2818 6508 3.253061 GGCCCCAGATCCCTAGCC 61.253 72.222 0.00 0.00 0.00 3.93
2819 6509 3.631046 GCCCCAGATCCCTAGCCG 61.631 72.222 0.00 0.00 0.00 5.52
2820 6510 3.631046 CCCCAGATCCCTAGCCGC 61.631 72.222 0.00 0.00 0.00 6.53
2821 6511 3.631046 CCCAGATCCCTAGCCGCC 61.631 72.222 0.00 0.00 0.00 6.13
2822 6512 2.844362 CCAGATCCCTAGCCGCCA 60.844 66.667 0.00 0.00 0.00 5.69
2823 6513 2.739784 CAGATCCCTAGCCGCCAG 59.260 66.667 0.00 0.00 0.00 4.85
2824 6514 2.136878 CAGATCCCTAGCCGCCAGT 61.137 63.158 0.00 0.00 0.00 4.00
2825 6515 1.834822 AGATCCCTAGCCGCCAGTC 60.835 63.158 0.00 0.00 0.00 3.51
2826 6516 2.844839 ATCCCTAGCCGCCAGTCC 60.845 66.667 0.00 0.00 0.00 3.85
2829 6519 3.541713 CCTAGCCGCCAGTCCCTC 61.542 72.222 0.00 0.00 0.00 4.30
2830 6520 3.541713 CTAGCCGCCAGTCCCTCC 61.542 72.222 0.00 0.00 0.00 4.30
2836 6526 4.106925 GCCAGTCCCTCCCTGCTG 62.107 72.222 0.00 0.00 0.00 4.41
2837 6527 4.106925 CCAGTCCCTCCCTGCTGC 62.107 72.222 0.00 0.00 0.00 5.25
2838 6528 3.007920 CAGTCCCTCCCTGCTGCT 61.008 66.667 0.00 0.00 0.00 4.24
2839 6529 2.686835 AGTCCCTCCCTGCTGCTC 60.687 66.667 0.00 0.00 0.00 4.26
2840 6530 3.791586 GTCCCTCCCTGCTGCTCC 61.792 72.222 0.00 0.00 0.00 4.70
2841 6531 4.337304 TCCCTCCCTGCTGCTCCA 62.337 66.667 0.00 0.00 0.00 3.86
2842 6532 3.333219 CCCTCCCTGCTGCTCCAA 61.333 66.667 0.00 0.00 0.00 3.53
2843 6533 2.045536 CCTCCCTGCTGCTCCAAC 60.046 66.667 0.00 0.00 0.00 3.77
2844 6534 2.435586 CTCCCTGCTGCTCCAACG 60.436 66.667 0.00 0.00 0.00 4.10
2845 6535 4.704833 TCCCTGCTGCTCCAACGC 62.705 66.667 0.00 0.00 0.00 4.84
2848 6538 3.429141 CTGCTGCTCCAACGCCAG 61.429 66.667 0.00 0.00 0.00 4.85
2857 6547 4.688419 CAACGCCAGCCGCTGTTG 62.688 66.667 18.98 12.76 41.78 3.33
2907 6597 2.034532 TGCACTGCAGGTCCATGG 59.965 61.111 19.93 4.97 33.32 3.66
2908 6598 3.446570 GCACTGCAGGTCCATGGC 61.447 66.667 19.93 1.78 0.00 4.40
2909 6599 3.129502 CACTGCAGGTCCATGGCG 61.130 66.667 19.93 0.00 0.00 5.69
2910 6600 4.415150 ACTGCAGGTCCATGGCGG 62.415 66.667 19.93 2.17 39.77 6.13
2914 6604 4.802051 CAGGTCCATGGCGGGTGG 62.802 72.222 6.96 0.00 38.11 4.61
2916 6606 4.796495 GGTCCATGGCGGGTGGTC 62.796 72.222 6.96 0.00 37.96 4.02
2936 6626 4.457496 CGCAGCGGACCCTGTGAT 62.457 66.667 7.00 0.00 44.09 3.06
2937 6627 2.821366 GCAGCGGACCCTGTGATG 60.821 66.667 10.54 0.00 35.28 3.07
2938 6628 2.821366 CAGCGGACCCTGTGATGC 60.821 66.667 2.66 0.00 0.00 3.91
2939 6629 4.457496 AGCGGACCCTGTGATGCG 62.457 66.667 0.00 0.00 0.00 4.73
2941 6631 3.770040 CGGACCCTGTGATGCGGA 61.770 66.667 0.00 0.00 0.00 5.54
2942 6632 2.187946 GGACCCTGTGATGCGGAG 59.812 66.667 0.00 0.00 0.00 4.63
2943 6633 2.187946 GACCCTGTGATGCGGAGG 59.812 66.667 0.00 0.00 0.00 4.30
2944 6634 4.101448 ACCCTGTGATGCGGAGGC 62.101 66.667 0.00 0.00 40.52 4.70
2954 6644 4.521062 GCGGAGGCAGCGTCTCAT 62.521 66.667 14.60 0.00 35.78 2.90
2955 6645 3.120105 CGGAGGCAGCGTCTCATA 58.880 61.111 14.60 0.00 35.78 2.15
2956 6646 1.299468 CGGAGGCAGCGTCTCATAC 60.299 63.158 14.60 0.00 35.78 2.39
2966 6656 1.067582 GTCTCATACGGGAAGGCCG 59.932 63.158 0.00 0.00 33.83 6.13
2967 6657 2.131709 TCTCATACGGGAAGGCCGG 61.132 63.158 0.00 0.00 40.16 6.13
2968 6658 3.158648 TCATACGGGAAGGCCGGG 61.159 66.667 2.18 0.00 38.72 5.73
2969 6659 4.250305 CATACGGGAAGGCCGGGG 62.250 72.222 2.18 0.00 38.72 5.73
3021 6711 3.207669 GCGCTGGGAGCCTTCATG 61.208 66.667 0.00 0.00 38.18 3.07
3022 6712 2.586245 CGCTGGGAGCCTTCATGA 59.414 61.111 0.00 0.00 38.18 3.07
3023 6713 1.817099 CGCTGGGAGCCTTCATGAC 60.817 63.158 0.00 0.00 38.18 3.06
3024 6714 1.452833 GCTGGGAGCCTTCATGACC 60.453 63.158 0.00 0.00 34.48 4.02
3025 6715 1.153289 CTGGGAGCCTTCATGACCG 60.153 63.158 0.00 0.00 0.00 4.79
3026 6716 2.190578 GGGAGCCTTCATGACCGG 59.809 66.667 0.00 0.00 0.00 5.28
3027 6717 2.670148 GGGAGCCTTCATGACCGGT 61.670 63.158 6.92 6.92 0.00 5.28
3028 6718 1.450312 GGAGCCTTCATGACCGGTG 60.450 63.158 14.63 0.00 0.00 4.94
3029 6719 1.450312 GAGCCTTCATGACCGGTGG 60.450 63.158 14.63 6.99 0.00 4.61
3030 6720 2.185310 GAGCCTTCATGACCGGTGGT 62.185 60.000 14.63 0.00 39.44 4.16
3031 6721 2.040544 GCCTTCATGACCGGTGGTG 61.041 63.158 14.63 11.07 35.25 4.17
3032 6722 1.374947 CCTTCATGACCGGTGGTGT 59.625 57.895 14.63 0.00 35.25 4.16
3033 6723 0.611200 CCTTCATGACCGGTGGTGTA 59.389 55.000 14.63 3.15 35.25 2.90
3034 6724 1.405526 CCTTCATGACCGGTGGTGTAG 60.406 57.143 14.63 13.31 35.25 2.74
3035 6725 0.036765 TTCATGACCGGTGGTGTAGC 60.037 55.000 14.63 0.00 35.25 3.58
3058 6748 3.857854 CGTGCGCATGAGTGGCTC 61.858 66.667 25.38 0.62 0.00 4.70
3059 6749 3.503363 GTGCGCATGAGTGGCTCC 61.503 66.667 15.91 0.00 0.00 4.70
3061 6751 4.819761 GCGCATGAGTGGCTCCGA 62.820 66.667 0.30 0.00 0.00 4.55
3062 6752 2.107750 CGCATGAGTGGCTCCGAT 59.892 61.111 0.00 0.00 0.00 4.18
3063 6753 2.242572 CGCATGAGTGGCTCCGATG 61.243 63.158 0.00 0.00 0.00 3.84
3064 6754 1.890979 GCATGAGTGGCTCCGATGG 60.891 63.158 0.00 0.00 0.00 3.51
3065 6755 1.890979 CATGAGTGGCTCCGATGGC 60.891 63.158 0.00 0.00 0.00 4.40
3066 6756 2.068821 ATGAGTGGCTCCGATGGCT 61.069 57.895 0.00 0.00 0.00 4.75
3067 6757 2.202987 GAGTGGCTCCGATGGCTG 60.203 66.667 0.00 0.00 0.00 4.85
3068 6758 4.479993 AGTGGCTCCGATGGCTGC 62.480 66.667 0.00 0.00 0.00 5.25
3076 6766 2.664185 CGATGGCTGCGGATCTGG 60.664 66.667 3.14 0.00 0.00 3.86
3077 6767 2.976903 GATGGCTGCGGATCTGGC 60.977 66.667 3.14 2.97 39.21 4.85
3078 6768 4.923942 ATGGCTGCGGATCTGGCG 62.924 66.667 3.14 0.00 41.17 5.69
3082 6772 3.842923 CTGCGGATCTGGCGTCCT 61.843 66.667 3.14 0.00 33.46 3.85
3083 6773 3.376935 CTGCGGATCTGGCGTCCTT 62.377 63.158 3.14 0.00 33.46 3.36
3084 6774 2.125106 GCGGATCTGGCGTCCTTT 60.125 61.111 3.14 0.00 33.46 3.11
3085 6775 1.745489 GCGGATCTGGCGTCCTTTT 60.745 57.895 3.14 0.00 33.46 2.27
3086 6776 1.706287 GCGGATCTGGCGTCCTTTTC 61.706 60.000 3.14 0.00 33.46 2.29
3087 6777 0.391130 CGGATCTGGCGTCCTTTTCA 60.391 55.000 0.00 0.00 33.46 2.69
3088 6778 1.373570 GGATCTGGCGTCCTTTTCAG 58.626 55.000 0.00 0.00 32.85 3.02
3089 6779 1.066143 GGATCTGGCGTCCTTTTCAGA 60.066 52.381 0.00 0.00 40.04 3.27
3090 6780 2.420687 GGATCTGGCGTCCTTTTCAGAT 60.421 50.000 4.59 4.59 46.04 2.90
3091 6781 2.386661 TCTGGCGTCCTTTTCAGATC 57.613 50.000 0.00 0.00 32.10 2.75
3092 6782 1.066143 TCTGGCGTCCTTTTCAGATCC 60.066 52.381 0.00 0.00 32.10 3.36
3093 6783 0.391130 TGGCGTCCTTTTCAGATCCG 60.391 55.000 0.00 0.00 0.00 4.18
3094 6784 0.391263 GGCGTCCTTTTCAGATCCGT 60.391 55.000 0.00 0.00 0.00 4.69
3095 6785 1.000145 GCGTCCTTTTCAGATCCGTC 59.000 55.000 0.00 0.00 0.00 4.79
3096 6786 1.404315 GCGTCCTTTTCAGATCCGTCT 60.404 52.381 0.00 0.00 34.14 4.18
3097 6787 2.531206 CGTCCTTTTCAGATCCGTCTC 58.469 52.381 0.00 0.00 30.42 3.36
3098 6788 2.531206 GTCCTTTTCAGATCCGTCTCG 58.469 52.381 0.00 0.00 30.42 4.04
3108 6798 2.758737 CCGTCTCGGTAGGGCCTT 60.759 66.667 13.45 0.00 42.73 4.35
3109 6799 2.494918 CGTCTCGGTAGGGCCTTG 59.505 66.667 13.45 1.95 34.25 3.61
3110 6800 2.901042 GTCTCGGTAGGGCCTTGG 59.099 66.667 13.45 0.84 34.25 3.61
3111 6801 3.081409 TCTCGGTAGGGCCTTGGC 61.081 66.667 13.45 2.49 34.25 4.52
3140 6830 3.827898 GCGAGGAGGACCGGTGAG 61.828 72.222 14.63 0.00 41.83 3.51
3142 6832 2.760385 GAGGAGGACCGGTGAGGG 60.760 72.222 14.63 0.00 46.96 4.30
3143 6833 4.400251 AGGAGGACCGGTGAGGGG 62.400 72.222 14.63 0.00 46.96 4.79
3152 6842 4.785453 GGTGAGGGGCGGCTTGAG 62.785 72.222 9.56 0.00 0.00 3.02
3153 6843 4.785453 GTGAGGGGCGGCTTGAGG 62.785 72.222 9.56 0.00 0.00 3.86
3158 6848 4.847444 GGGCGGCTTGAGGCTCTC 62.847 72.222 16.72 4.84 41.46 3.20
3159 6849 3.780173 GGCGGCTTGAGGCTCTCT 61.780 66.667 16.72 0.00 41.46 3.10
3160 6850 2.427245 GGCGGCTTGAGGCTCTCTA 61.427 63.158 16.72 0.28 41.46 2.43
3161 6851 1.227118 GCGGCTTGAGGCTCTCTAC 60.227 63.158 16.72 2.58 41.46 2.59
3162 6852 1.439644 CGGCTTGAGGCTCTCTACC 59.560 63.158 16.72 10.71 41.46 3.18
3163 6853 1.439644 GGCTTGAGGCTCTCTACCG 59.560 63.158 16.72 0.00 41.46 4.02
3164 6854 1.439644 GCTTGAGGCTCTCTACCGG 59.560 63.158 16.72 0.00 38.06 5.28
3165 6855 1.439644 CTTGAGGCTCTCTACCGGC 59.560 63.158 16.72 0.00 0.00 6.13
3166 6856 1.304962 TTGAGGCTCTCTACCGGCA 60.305 57.895 16.72 0.00 0.00 5.69
3167 6857 0.687757 TTGAGGCTCTCTACCGGCAT 60.688 55.000 16.72 0.00 0.00 4.40
3168 6858 1.365633 GAGGCTCTCTACCGGCATG 59.634 63.158 7.40 0.00 0.00 4.06
3169 6859 2.280457 GGCTCTCTACCGGCATGC 60.280 66.667 9.90 9.90 0.00 4.06
3170 6860 2.280457 GCTCTCTACCGGCATGCC 60.280 66.667 27.67 27.67 0.00 4.40
3201 6891 2.486042 GTCTCCACGACGAGGCTC 59.514 66.667 6.43 3.87 31.52 4.70
3202 6892 2.750637 TCTCCACGACGAGGCTCC 60.751 66.667 9.32 0.00 0.00 4.70
3203 6893 4.180946 CTCCACGACGAGGCTCCG 62.181 72.222 9.32 10.25 0.00 4.63
3205 6895 4.052229 CCACGACGAGGCTCCGTT 62.052 66.667 14.77 0.00 43.49 4.44
3206 6896 2.504244 CACGACGAGGCTCCGTTC 60.504 66.667 14.77 5.84 43.49 3.95
3207 6897 4.099170 ACGACGAGGCTCCGTTCG 62.099 66.667 20.23 20.23 43.49 3.95
3208 6898 4.831307 CGACGAGGCTCCGTTCGG 62.831 72.222 9.32 4.74 43.49 4.30
3209 6899 3.745803 GACGAGGCTCCGTTCGGT 61.746 66.667 9.32 0.00 43.49 4.69
3210 6900 3.278592 GACGAGGCTCCGTTCGGTT 62.279 63.158 9.32 0.00 43.49 4.44
3211 6901 2.506438 CGAGGCTCCGTTCGGTTC 60.506 66.667 9.32 4.41 33.39 3.62
3212 6902 2.125633 GAGGCTCCGTTCGGTTCC 60.126 66.667 2.15 12.35 0.00 3.62
3213 6903 2.920912 AGGCTCCGTTCGGTTCCA 60.921 61.111 19.42 0.37 0.00 3.53
3214 6904 2.434359 GGCTCCGTTCGGTTCCAG 60.434 66.667 11.04 2.58 0.00 3.86
3215 6905 3.119096 GCTCCGTTCGGTTCCAGC 61.119 66.667 11.04 8.73 0.00 4.85
3216 6906 2.434359 CTCCGTTCGGTTCCAGCC 60.434 66.667 11.04 0.00 0.00 4.85
3217 6907 3.234630 CTCCGTTCGGTTCCAGCCA 62.235 63.158 11.04 0.00 0.00 4.75
3218 6908 2.742372 CCGTTCGGTTCCAGCCAG 60.742 66.667 2.82 0.00 0.00 4.85
3219 6909 3.423154 CGTTCGGTTCCAGCCAGC 61.423 66.667 0.00 0.00 0.00 4.85
3220 6910 2.032681 GTTCGGTTCCAGCCAGCT 59.967 61.111 0.00 0.00 0.00 4.24
3221 6911 2.032528 TTCGGTTCCAGCCAGCTG 59.967 61.111 12.78 12.78 43.26 4.24
3222 6912 4.704833 TCGGTTCCAGCCAGCTGC 62.705 66.667 14.26 3.91 42.35 5.25
3236 6926 3.565905 CAGCTGCTAAGTTGGGAAAAG 57.434 47.619 0.00 0.00 31.38 2.27
3237 6927 2.887152 CAGCTGCTAAGTTGGGAAAAGT 59.113 45.455 0.00 0.00 31.38 2.66
3238 6928 3.057946 CAGCTGCTAAGTTGGGAAAAGTC 60.058 47.826 0.00 0.00 31.38 3.01
3239 6929 3.149981 GCTGCTAAGTTGGGAAAAGTCT 58.850 45.455 0.00 0.00 0.00 3.24
3240 6930 4.041691 AGCTGCTAAGTTGGGAAAAGTCTA 59.958 41.667 0.00 0.00 0.00 2.59
3241 6931 4.760204 GCTGCTAAGTTGGGAAAAGTCTAA 59.240 41.667 0.00 0.00 0.00 2.10
3242 6932 5.240844 GCTGCTAAGTTGGGAAAAGTCTAAA 59.759 40.000 0.00 0.00 0.00 1.85
3243 6933 6.238925 GCTGCTAAGTTGGGAAAAGTCTAAAA 60.239 38.462 0.00 0.00 0.00 1.52
3244 6934 7.523873 GCTGCTAAGTTGGGAAAAGTCTAAAAT 60.524 37.037 0.00 0.00 0.00 1.82
3245 6935 8.927675 TGCTAAGTTGGGAAAAGTCTAAAATA 57.072 30.769 0.00 0.00 0.00 1.40
3246 6936 9.357161 TGCTAAGTTGGGAAAAGTCTAAAATAA 57.643 29.630 0.00 0.00 0.00 1.40
3250 6940 8.777578 AGTTGGGAAAAGTCTAAAATAAACCT 57.222 30.769 0.00 0.00 0.00 3.50
3251 6941 9.209048 AGTTGGGAAAAGTCTAAAATAAACCTT 57.791 29.630 0.00 0.00 0.00 3.50
3252 6942 9.256477 GTTGGGAAAAGTCTAAAATAAACCTTG 57.744 33.333 0.00 0.00 0.00 3.61
3253 6943 8.770010 TGGGAAAAGTCTAAAATAAACCTTGA 57.230 30.769 0.00 0.00 0.00 3.02
3254 6944 9.203163 TGGGAAAAGTCTAAAATAAACCTTGAA 57.797 29.630 0.00 0.00 0.00 2.69
3255 6945 9.472361 GGGAAAAGTCTAAAATAAACCTTGAAC 57.528 33.333 0.00 0.00 0.00 3.18
3269 6959 5.500645 ACCTTGAACTTGTAGACAAAAGC 57.499 39.130 0.00 0.00 35.15 3.51
3270 6960 5.193679 ACCTTGAACTTGTAGACAAAAGCT 58.806 37.500 0.00 0.00 35.15 3.74
3271 6961 6.354130 ACCTTGAACTTGTAGACAAAAGCTA 58.646 36.000 0.00 0.00 35.15 3.32
3272 6962 6.826741 ACCTTGAACTTGTAGACAAAAGCTAA 59.173 34.615 0.00 0.00 35.15 3.09
3273 6963 7.338449 ACCTTGAACTTGTAGACAAAAGCTAAA 59.662 33.333 0.00 0.00 35.15 1.85
3274 6964 8.352942 CCTTGAACTTGTAGACAAAAGCTAAAT 58.647 33.333 0.00 0.00 35.15 1.40
3275 6965 9.387123 CTTGAACTTGTAGACAAAAGCTAAATC 57.613 33.333 0.00 0.00 35.15 2.17
3276 6966 8.445275 TGAACTTGTAGACAAAAGCTAAATCA 57.555 30.769 0.00 0.00 35.15 2.57
3277 6967 8.898761 TGAACTTGTAGACAAAAGCTAAATCAA 58.101 29.630 0.00 0.00 35.15 2.57
3278 6968 9.730420 GAACTTGTAGACAAAAGCTAAATCAAA 57.270 29.630 0.00 0.00 35.15 2.69
3279 6969 9.516314 AACTTGTAGACAAAAGCTAAATCAAAC 57.484 29.630 0.00 0.00 35.15 2.93
3280 6970 8.135529 ACTTGTAGACAAAAGCTAAATCAAACC 58.864 33.333 0.00 0.00 35.15 3.27
3281 6971 6.977213 TGTAGACAAAAGCTAAATCAAACCC 58.023 36.000 0.00 0.00 0.00 4.11
3282 6972 6.775629 TGTAGACAAAAGCTAAATCAAACCCT 59.224 34.615 0.00 0.00 0.00 4.34
3283 6973 6.089249 AGACAAAAGCTAAATCAAACCCTG 57.911 37.500 0.00 0.00 0.00 4.45
3284 6974 5.833131 AGACAAAAGCTAAATCAAACCCTGA 59.167 36.000 0.00 0.00 38.81 3.86
3285 6975 6.323739 AGACAAAAGCTAAATCAAACCCTGAA 59.676 34.615 0.00 0.00 37.67 3.02
3286 6976 7.015584 AGACAAAAGCTAAATCAAACCCTGAAT 59.984 33.333 0.00 0.00 37.67 2.57
3287 6977 7.508687 ACAAAAGCTAAATCAAACCCTGAATT 58.491 30.769 0.00 0.00 37.67 2.17
3288 6978 7.992608 ACAAAAGCTAAATCAAACCCTGAATTT 59.007 29.630 0.00 0.00 37.67 1.82
3289 6979 8.839343 CAAAAGCTAAATCAAACCCTGAATTTT 58.161 29.630 0.00 0.00 37.67 1.82
3290 6980 7.967890 AAGCTAAATCAAACCCTGAATTTTG 57.032 32.000 0.00 0.00 37.67 2.44
3291 6981 7.301868 AGCTAAATCAAACCCTGAATTTTGA 57.698 32.000 0.00 0.00 43.89 2.69
3292 6982 7.734942 AGCTAAATCAAACCCTGAATTTTGAA 58.265 30.769 1.20 0.00 43.20 2.69
3293 6983 8.377799 AGCTAAATCAAACCCTGAATTTTGAAT 58.622 29.630 1.20 0.00 43.20 2.57
3294 6984 8.659491 GCTAAATCAAACCCTGAATTTTGAATC 58.341 33.333 1.20 0.00 43.20 2.52
3295 6985 7.984422 AAATCAAACCCTGAATTTTGAATCC 57.016 32.000 1.20 0.00 43.20 3.01
3296 6986 6.940430 ATCAAACCCTGAATTTTGAATCCT 57.060 33.333 1.20 0.00 43.20 3.24
3297 6987 6.745794 TCAAACCCTGAATTTTGAATCCTT 57.254 33.333 0.00 0.00 38.48 3.36
3298 6988 7.847711 TCAAACCCTGAATTTTGAATCCTTA 57.152 32.000 0.00 0.00 38.48 2.69
3299 6989 8.256356 TCAAACCCTGAATTTTGAATCCTTAA 57.744 30.769 0.00 0.00 38.48 1.85
3300 6990 8.709308 TCAAACCCTGAATTTTGAATCCTTAAA 58.291 29.630 0.00 0.00 38.48 1.52
3301 6991 9.336171 CAAACCCTGAATTTTGAATCCTTAAAA 57.664 29.630 0.00 0.00 35.13 1.52
3303 6993 9.725019 AACCCTGAATTTTGAATCCTTAAAATC 57.275 29.630 0.00 0.00 35.94 2.17
3304 6994 8.879227 ACCCTGAATTTTGAATCCTTAAAATCA 58.121 29.630 0.00 0.00 35.94 2.57
3305 6995 9.374838 CCCTGAATTTTGAATCCTTAAAATCAG 57.625 33.333 0.00 0.00 35.94 2.90
3306 6996 8.876790 CCTGAATTTTGAATCCTTAAAATCAGC 58.123 33.333 0.00 0.00 35.94 4.26
3307 6997 9.426837 CTGAATTTTGAATCCTTAAAATCAGCA 57.573 29.630 0.00 0.00 35.94 4.41
3308 6998 9.206870 TGAATTTTGAATCCTTAAAATCAGCAC 57.793 29.630 0.00 0.00 35.94 4.40
3309 6999 9.206870 GAATTTTGAATCCTTAAAATCAGCACA 57.793 29.630 0.00 0.00 35.94 4.57
3310 7000 7.945033 TTTTGAATCCTTAAAATCAGCACAC 57.055 32.000 0.00 0.00 0.00 3.82
3311 7001 6.899393 TTGAATCCTTAAAATCAGCACACT 57.101 33.333 0.00 0.00 0.00 3.55
3312 7002 6.258230 TGAATCCTTAAAATCAGCACACTG 57.742 37.500 0.00 0.00 45.95 3.66
3326 7016 5.220710 AGCACACTGAACTATATGATCCC 57.779 43.478 0.00 0.00 0.00 3.85
3327 7017 3.990469 GCACACTGAACTATATGATCCCG 59.010 47.826 0.00 0.00 0.00 5.14
3328 7018 4.560128 CACACTGAACTATATGATCCCGG 58.440 47.826 0.00 0.00 0.00 5.73
3329 7019 4.039245 CACACTGAACTATATGATCCCGGT 59.961 45.833 0.00 0.00 0.00 5.28
3330 7020 4.281182 ACACTGAACTATATGATCCCGGTC 59.719 45.833 0.00 0.00 0.00 4.79
3331 7021 4.524714 CACTGAACTATATGATCCCGGTCT 59.475 45.833 0.00 0.00 0.00 3.85
3332 7022 5.710567 CACTGAACTATATGATCCCGGTCTA 59.289 44.000 0.00 0.00 0.00 2.59
3333 7023 6.378564 CACTGAACTATATGATCCCGGTCTAT 59.621 42.308 0.00 0.00 0.00 1.98
3334 7024 6.954684 ACTGAACTATATGATCCCGGTCTATT 59.045 38.462 0.00 0.00 0.00 1.73
3335 7025 7.455008 ACTGAACTATATGATCCCGGTCTATTT 59.545 37.037 0.00 0.00 0.00 1.40
3336 7026 8.202461 TGAACTATATGATCCCGGTCTATTTT 57.798 34.615 0.00 0.00 0.00 1.82
3337 7027 9.316594 TGAACTATATGATCCCGGTCTATTTTA 57.683 33.333 0.00 0.00 0.00 1.52
3342 7032 8.855804 ATATGATCCCGGTCTATTTTATACCT 57.144 34.615 0.00 0.00 0.00 3.08
3343 7033 7.569599 ATGATCCCGGTCTATTTTATACCTT 57.430 36.000 0.00 0.00 0.00 3.50
3344 7034 6.765403 TGATCCCGGTCTATTTTATACCTTG 58.235 40.000 0.00 0.00 0.00 3.61
3345 7035 6.555738 TGATCCCGGTCTATTTTATACCTTGA 59.444 38.462 0.00 0.00 0.00 3.02
3346 7036 6.415206 TCCCGGTCTATTTTATACCTTGAG 57.585 41.667 0.00 0.00 0.00 3.02
3347 7037 5.901276 TCCCGGTCTATTTTATACCTTGAGT 59.099 40.000 0.00 0.00 0.00 3.41
3348 7038 5.989777 CCCGGTCTATTTTATACCTTGAGTG 59.010 44.000 0.00 0.00 0.00 3.51
3349 7039 5.465724 CCGGTCTATTTTATACCTTGAGTGC 59.534 44.000 0.00 0.00 0.00 4.40
3350 7040 6.046593 CGGTCTATTTTATACCTTGAGTGCA 58.953 40.000 0.00 0.00 0.00 4.57
3351 7041 6.706270 CGGTCTATTTTATACCTTGAGTGCAT 59.294 38.462 0.00 0.00 0.00 3.96
3352 7042 7.226720 CGGTCTATTTTATACCTTGAGTGCATT 59.773 37.037 0.00 0.00 0.00 3.56
3353 7043 8.560374 GGTCTATTTTATACCTTGAGTGCATTC 58.440 37.037 1.56 1.56 0.00 2.67
3354 7044 8.560374 GTCTATTTTATACCTTGAGTGCATTCC 58.440 37.037 6.77 0.00 0.00 3.01
3355 7045 6.715347 ATTTTATACCTTGAGTGCATTCCC 57.285 37.500 6.77 0.00 0.00 3.97
3356 7046 4.853468 TTATACCTTGAGTGCATTCCCA 57.147 40.909 6.77 0.00 0.00 4.37
3357 7047 3.737559 ATACCTTGAGTGCATTCCCAA 57.262 42.857 6.77 0.39 0.00 4.12
3358 7048 2.380064 ACCTTGAGTGCATTCCCAAA 57.620 45.000 6.77 0.00 0.00 3.28
3359 7049 1.963515 ACCTTGAGTGCATTCCCAAAC 59.036 47.619 6.77 0.00 0.00 2.93
3360 7050 1.962807 CCTTGAGTGCATTCCCAAACA 59.037 47.619 6.77 0.00 0.00 2.83
3361 7051 2.364970 CCTTGAGTGCATTCCCAAACAA 59.635 45.455 6.77 0.00 0.00 2.83
3362 7052 3.553508 CCTTGAGTGCATTCCCAAACAAG 60.554 47.826 6.77 3.26 33.75 3.16
3363 7053 1.962807 TGAGTGCATTCCCAAACAAGG 59.037 47.619 6.77 0.00 0.00 3.61
3364 7054 2.238521 GAGTGCATTCCCAAACAAGGA 58.761 47.619 0.00 0.00 0.00 3.36
3365 7055 2.827921 GAGTGCATTCCCAAACAAGGAT 59.172 45.455 0.00 0.00 32.10 3.24
3366 7056 3.242011 AGTGCATTCCCAAACAAGGATT 58.758 40.909 0.00 0.00 32.10 3.01
3384 7074 8.647143 CAAGGATTGTTTTGAATGTTTGTAGT 57.353 30.769 0.00 0.00 42.34 2.73
3385 7075 9.743057 CAAGGATTGTTTTGAATGTTTGTAGTA 57.257 29.630 0.00 0.00 42.34 1.82
3386 7076 9.965824 AAGGATTGTTTTGAATGTTTGTAGTAG 57.034 29.630 0.00 0.00 0.00 2.57
3387 7077 9.349713 AGGATTGTTTTGAATGTTTGTAGTAGA 57.650 29.630 0.00 0.00 0.00 2.59
3405 7095 9.817809 TGTAGTAGATCTACCAAATTCATTGAC 57.182 33.333 25.93 5.83 45.99 3.18
3406 7096 9.262358 GTAGTAGATCTACCAAATTCATTGACC 57.738 37.037 25.93 0.00 42.13 4.02
3407 7097 7.861629 AGTAGATCTACCAAATTCATTGACCA 58.138 34.615 25.93 0.00 39.07 4.02
3408 7098 7.989741 AGTAGATCTACCAAATTCATTGACCAG 59.010 37.037 25.93 0.00 39.07 4.00
3409 7099 6.125029 AGATCTACCAAATTCATTGACCAGG 58.875 40.000 0.00 0.00 41.85 4.45
3410 7100 5.512942 TCTACCAAATTCATTGACCAGGA 57.487 39.130 0.00 0.00 41.85 3.86
3411 7101 5.500234 TCTACCAAATTCATTGACCAGGAG 58.500 41.667 0.00 0.00 41.85 3.69
3412 7102 4.387026 ACCAAATTCATTGACCAGGAGA 57.613 40.909 0.00 0.00 41.85 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 1.622607 CCGCCACCCAATCCAGACTA 61.623 60.000 0.00 0.00 0.00 2.59
138 139 2.203056 CAATCGGCGCCTCCATGA 60.203 61.111 26.68 14.60 34.01 3.07
152 153 3.490348 CTGAACAACAGTTCCTCCCAAT 58.510 45.455 5.96 0.00 40.69 3.16
166 168 2.711009 ACAACATCTCTCCCCTGAACAA 59.289 45.455 0.00 0.00 0.00 2.83
172 174 1.842562 CATCCACAACATCTCTCCCCT 59.157 52.381 0.00 0.00 0.00 4.79
265 267 1.404181 CCACCACTCGTCGTCAATGAT 60.404 52.381 0.00 0.00 0.00 2.45
315 317 2.514592 CGTCCATCCAGCCGCATT 60.515 61.111 0.00 0.00 0.00 3.56
484 488 1.434188 CCCATCCTAGCCACATACCA 58.566 55.000 0.00 0.00 0.00 3.25
537 541 3.615496 CCGAACCTAATACCAAACAGACG 59.385 47.826 0.00 0.00 0.00 4.18
595 599 3.023832 TCATCTAGGCAACATCTGTCGA 58.976 45.455 0.00 0.00 41.41 4.20
625 629 5.640189 ACAACGTAGTACATCAGTAAGCT 57.360 39.130 0.38 0.00 45.00 3.74
680 684 1.040646 ATCTGGACGATGCATACGGT 58.959 50.000 18.34 9.62 34.93 4.83
703 707 0.832135 GAGGATGCACCCCCGATCTA 60.832 60.000 0.00 0.00 40.05 1.98
706 710 3.171388 GGAGGATGCACCCCCGAT 61.171 66.667 0.00 0.00 40.05 4.18
707 711 3.943137 AAGGAGGATGCACCCCCGA 62.943 63.158 0.00 0.00 40.05 5.14
744 748 7.209471 ACGTGGCTGAATGAGTTTTATTTTA 57.791 32.000 0.00 0.00 0.00 1.52
766 770 0.731514 TTCGAGGTTGCTCGCTAACG 60.732 55.000 0.00 0.00 45.45 3.18
776 780 5.916883 TCGTTTACTTAGAACTTCGAGGTTG 59.083 40.000 18.48 5.81 0.00 3.77
780 784 5.392286 AGCTCGTTTACTTAGAACTTCGAG 58.608 41.667 0.00 0.00 43.78 4.04
783 787 7.806960 TCAGTAAGCTCGTTTACTTAGAACTTC 59.193 37.037 3.81 0.00 40.86 3.01
812 816 7.171630 AGTGTGTAAACCAATAAAAACCACA 57.828 32.000 0.00 0.00 0.00 4.17
835 842 7.757173 TCGATCTCAACTCTCAAGTAAATCAAG 59.243 37.037 0.00 0.00 33.48 3.02
847 854 6.502652 TCTCATCAATTCGATCTCAACTCTC 58.497 40.000 0.00 0.00 29.21 3.20
884 891 3.508793 AGAAGCATCTGTTTGGTGAATGG 59.491 43.478 0.00 0.00 33.59 3.16
896 903 4.892934 AGGTAGAGGTAGAAGAAGCATCTG 59.107 45.833 0.00 0.00 35.59 2.90
898 905 4.038642 CCAGGTAGAGGTAGAAGAAGCATC 59.961 50.000 0.00 0.00 0.00 3.91
945 952 2.039084 AGTAGTTGACCTTTGAGCCCAG 59.961 50.000 0.00 0.00 0.00 4.45
965 3099 1.220206 CAGGGTGCAGACTAGCCAG 59.780 63.158 0.00 0.00 38.15 4.85
1485 3712 2.805353 CACGCGAAGGACGTCTGG 60.805 66.667 15.93 0.00 42.96 3.86
2061 4328 4.752879 ACCATGAACCGCCCGACG 62.753 66.667 0.00 0.00 43.15 5.12
2136 4403 1.291877 CTTCGAAAGCCCTGGTGACG 61.292 60.000 0.00 0.00 0.00 4.35
2282 4558 2.669569 GCGCCCTTGCACTCTGAA 60.670 61.111 0.00 0.00 37.32 3.02
2326 4611 1.525442 CGAATAGGAAGGGCCGGTT 59.475 57.895 1.90 0.00 43.43 4.44
2370 4655 1.153524 ATGGCCAAGGAACAGCACA 59.846 52.632 10.96 0.00 0.00 4.57
2434 4719 5.853572 TTCTTTATACCCACTCCCAAAGT 57.146 39.130 0.00 0.00 39.44 2.66
2470 4755 2.745102 TCACGAAAATACACACGAGCA 58.255 42.857 0.00 0.00 0.00 4.26
2565 6255 3.059800 GTCCAACAGAAGTTTGTAGACGC 60.060 47.826 0.00 0.00 35.28 5.19
2627 6317 9.726438 ACATAGCCTATTCACCATAAAGAATAC 57.274 33.333 0.00 0.00 36.07 1.89
2629 6319 9.289782 GAACATAGCCTATTCACCATAAAGAAT 57.710 33.333 0.00 0.00 38.05 2.40
2630 6320 8.271458 TGAACATAGCCTATTCACCATAAAGAA 58.729 33.333 0.00 0.00 0.00 2.52
2631 6321 7.801104 TGAACATAGCCTATTCACCATAAAGA 58.199 34.615 0.00 0.00 0.00 2.52
2632 6322 8.509690 CATGAACATAGCCTATTCACCATAAAG 58.490 37.037 0.00 0.00 35.28 1.85
2633 6323 7.448161 CCATGAACATAGCCTATTCACCATAAA 59.552 37.037 0.00 0.00 35.28 1.40
2634 6324 6.942005 CCATGAACATAGCCTATTCACCATAA 59.058 38.462 0.00 0.00 35.28 1.90
2635 6325 6.272090 TCCATGAACATAGCCTATTCACCATA 59.728 38.462 0.00 0.00 35.28 2.74
2636 6326 5.073554 TCCATGAACATAGCCTATTCACCAT 59.926 40.000 0.00 0.00 35.28 3.55
2637 6327 4.411869 TCCATGAACATAGCCTATTCACCA 59.588 41.667 0.00 0.00 35.28 4.17
2638 6328 4.973168 TCCATGAACATAGCCTATTCACC 58.027 43.478 0.00 0.00 35.28 4.02
2639 6329 5.413833 CCATCCATGAACATAGCCTATTCAC 59.586 44.000 0.00 0.00 35.28 3.18
2640 6330 5.310331 TCCATCCATGAACATAGCCTATTCA 59.690 40.000 0.00 0.00 36.81 2.57
2641 6331 5.645497 GTCCATCCATGAACATAGCCTATTC 59.355 44.000 0.00 0.00 0.00 1.75
2642 6332 5.073554 TGTCCATCCATGAACATAGCCTATT 59.926 40.000 0.00 0.00 0.00 1.73
2643 6333 4.598807 TGTCCATCCATGAACATAGCCTAT 59.401 41.667 0.00 0.00 0.00 2.57
2644 6334 3.973305 TGTCCATCCATGAACATAGCCTA 59.027 43.478 0.00 0.00 0.00 3.93
2645 6335 2.779430 TGTCCATCCATGAACATAGCCT 59.221 45.455 0.00 0.00 0.00 4.58
2646 6336 2.880890 GTGTCCATCCATGAACATAGCC 59.119 50.000 0.00 0.00 0.00 3.93
2647 6337 3.813443 AGTGTCCATCCATGAACATAGC 58.187 45.455 0.00 0.00 0.00 2.97
2648 6338 9.559732 TTATTTAGTGTCCATCCATGAACATAG 57.440 33.333 0.00 0.00 0.00 2.23
2650 6340 9.425248 AATTATTTAGTGTCCATCCATGAACAT 57.575 29.630 0.00 0.00 0.00 2.71
2651 6341 8.821686 AATTATTTAGTGTCCATCCATGAACA 57.178 30.769 0.00 0.00 0.00 3.18
2652 6342 8.352942 GGAATTATTTAGTGTCCATCCATGAAC 58.647 37.037 0.00 0.00 0.00 3.18
2653 6343 8.058235 TGGAATTATTTAGTGTCCATCCATGAA 58.942 33.333 0.00 0.00 33.43 2.57
2654 6344 7.581814 TGGAATTATTTAGTGTCCATCCATGA 58.418 34.615 0.00 0.00 33.43 3.07
2655 6345 7.822161 TGGAATTATTTAGTGTCCATCCATG 57.178 36.000 0.00 0.00 33.43 3.66
2656 6346 9.438163 AAATGGAATTATTTAGTGTCCATCCAT 57.562 29.630 4.07 0.00 46.11 3.41
2657 6347 8.837099 AAATGGAATTATTTAGTGTCCATCCA 57.163 30.769 4.07 0.00 46.11 3.41
2673 6363 9.675464 TGATAGTCGGTAAAAGTAAATGGAATT 57.325 29.630 0.00 0.00 38.98 2.17
2674 6364 9.106070 GTGATAGTCGGTAAAAGTAAATGGAAT 57.894 33.333 0.00 0.00 0.00 3.01
2675 6365 8.095792 TGTGATAGTCGGTAAAAGTAAATGGAA 58.904 33.333 0.00 0.00 0.00 3.53
2676 6366 7.613585 TGTGATAGTCGGTAAAAGTAAATGGA 58.386 34.615 0.00 0.00 0.00 3.41
2677 6367 7.837202 TGTGATAGTCGGTAAAAGTAAATGG 57.163 36.000 0.00 0.00 0.00 3.16
2678 6368 9.093970 TGATGTGATAGTCGGTAAAAGTAAATG 57.906 33.333 0.00 0.00 0.00 2.32
2679 6369 9.661563 TTGATGTGATAGTCGGTAAAAGTAAAT 57.338 29.630 0.00 0.00 0.00 1.40
2680 6370 9.491675 TTTGATGTGATAGTCGGTAAAAGTAAA 57.508 29.630 0.00 0.00 0.00 2.01
2681 6371 9.661563 ATTTGATGTGATAGTCGGTAAAAGTAA 57.338 29.630 0.00 0.00 0.00 2.24
2682 6372 9.661563 AATTTGATGTGATAGTCGGTAAAAGTA 57.338 29.630 0.00 0.00 0.00 2.24
2683 6373 8.561738 AATTTGATGTGATAGTCGGTAAAAGT 57.438 30.769 0.00 0.00 0.00 2.66
2686 6376 9.438228 TGTTAATTTGATGTGATAGTCGGTAAA 57.562 29.630 0.00 0.00 0.00 2.01
2687 6377 9.093970 CTGTTAATTTGATGTGATAGTCGGTAA 57.906 33.333 0.00 0.00 0.00 2.85
2688 6378 8.471609 TCTGTTAATTTGATGTGATAGTCGGTA 58.528 33.333 0.00 0.00 0.00 4.02
2689 6379 7.327975 TCTGTTAATTTGATGTGATAGTCGGT 58.672 34.615 0.00 0.00 0.00 4.69
2690 6380 7.770801 TCTGTTAATTTGATGTGATAGTCGG 57.229 36.000 0.00 0.00 0.00 4.79
2708 6398 9.667107 CTTCCAATCAGGTATAGTTTTCTGTTA 57.333 33.333 0.00 0.00 39.02 2.41
2709 6399 7.611855 CCTTCCAATCAGGTATAGTTTTCTGTT 59.388 37.037 0.00 0.00 39.02 3.16
2710 6400 7.112779 CCTTCCAATCAGGTATAGTTTTCTGT 58.887 38.462 0.00 0.00 39.02 3.41
2711 6401 7.112779 ACCTTCCAATCAGGTATAGTTTTCTG 58.887 38.462 0.00 0.00 43.34 3.02
2712 6402 7.272144 ACCTTCCAATCAGGTATAGTTTTCT 57.728 36.000 0.00 0.00 43.34 2.52
2713 6403 7.939784 AACCTTCCAATCAGGTATAGTTTTC 57.060 36.000 0.00 0.00 44.48 2.29
2714 6404 8.721133 AAAACCTTCCAATCAGGTATAGTTTT 57.279 30.769 0.00 0.00 44.48 2.43
2715 6405 9.990868 ATAAAACCTTCCAATCAGGTATAGTTT 57.009 29.630 0.00 0.00 44.48 2.66
2716 6406 9.628500 GATAAAACCTTCCAATCAGGTATAGTT 57.372 33.333 0.00 0.00 44.48 2.24
2717 6407 8.778059 TGATAAAACCTTCCAATCAGGTATAGT 58.222 33.333 0.00 0.00 44.48 2.12
2718 6408 9.627123 TTGATAAAACCTTCCAATCAGGTATAG 57.373 33.333 0.00 0.00 44.48 1.31
2723 6413 9.359653 AGATATTGATAAAACCTTCCAATCAGG 57.640 33.333 0.00 0.00 37.45 3.86
2736 6426 9.256477 CGCCTTGTGTACTAGATATTGATAAAA 57.744 33.333 0.00 0.00 0.00 1.52
2737 6427 8.635328 TCGCCTTGTGTACTAGATATTGATAAA 58.365 33.333 0.00 0.00 0.00 1.40
2738 6428 8.080417 GTCGCCTTGTGTACTAGATATTGATAA 58.920 37.037 0.00 0.00 0.00 1.75
2739 6429 7.309012 GGTCGCCTTGTGTACTAGATATTGATA 60.309 40.741 0.00 0.00 0.00 2.15
2740 6430 6.448006 GTCGCCTTGTGTACTAGATATTGAT 58.552 40.000 0.00 0.00 0.00 2.57
2741 6431 5.221185 GGTCGCCTTGTGTACTAGATATTGA 60.221 44.000 0.00 0.00 0.00 2.57
2742 6432 4.982916 GGTCGCCTTGTGTACTAGATATTG 59.017 45.833 0.00 0.00 0.00 1.90
2743 6433 4.894114 AGGTCGCCTTGTGTACTAGATATT 59.106 41.667 0.00 0.00 0.00 1.28
2744 6434 4.471548 AGGTCGCCTTGTGTACTAGATAT 58.528 43.478 0.00 0.00 0.00 1.63
2745 6435 3.881688 GAGGTCGCCTTGTGTACTAGATA 59.118 47.826 0.00 0.00 31.76 1.98
2746 6436 2.688958 GAGGTCGCCTTGTGTACTAGAT 59.311 50.000 0.00 0.00 31.76 1.98
2747 6437 2.089980 GAGGTCGCCTTGTGTACTAGA 58.910 52.381 0.00 0.00 31.76 2.43
2748 6438 1.134560 GGAGGTCGCCTTGTGTACTAG 59.865 57.143 0.00 0.00 31.76 2.57
2749 6439 1.180029 GGAGGTCGCCTTGTGTACTA 58.820 55.000 0.00 0.00 31.76 1.82
2750 6440 1.542187 GGGAGGTCGCCTTGTGTACT 61.542 60.000 0.00 0.00 31.76 2.73
2751 6441 1.079336 GGGAGGTCGCCTTGTGTAC 60.079 63.158 0.00 0.00 31.76 2.90
2752 6442 2.288025 GGGGAGGTCGCCTTGTGTA 61.288 63.158 5.84 0.00 44.66 2.90
2753 6443 3.637273 GGGGAGGTCGCCTTGTGT 61.637 66.667 5.84 0.00 44.66 3.72
2793 6483 4.115199 ATCTGGGGCCCTTGACGC 62.115 66.667 25.93 3.69 0.00 5.19
2794 6484 2.190578 GATCTGGGGCCCTTGACG 59.809 66.667 25.93 7.08 0.00 4.35
2795 6485 2.597903 GGATCTGGGGCCCTTGAC 59.402 66.667 25.93 12.59 0.00 3.18
2796 6486 2.696125 GGGATCTGGGGCCCTTGA 60.696 66.667 25.93 21.55 41.31 3.02
2800 6490 3.253061 GCTAGGGATCTGGGGCCC 61.253 72.222 18.17 18.17 45.04 5.80
2801 6491 3.253061 GGCTAGGGATCTGGGGCC 61.253 72.222 0.00 0.00 0.00 5.80
2802 6492 3.631046 CGGCTAGGGATCTGGGGC 61.631 72.222 0.00 0.00 0.00 5.80
2803 6493 3.631046 GCGGCTAGGGATCTGGGG 61.631 72.222 0.00 0.00 0.00 4.96
2804 6494 3.631046 GGCGGCTAGGGATCTGGG 61.631 72.222 0.00 0.00 0.00 4.45
2805 6495 2.844362 TGGCGGCTAGGGATCTGG 60.844 66.667 11.43 0.00 0.00 3.86
2806 6496 2.093537 GACTGGCGGCTAGGGATCTG 62.094 65.000 17.93 0.00 0.00 2.90
2807 6497 1.834822 GACTGGCGGCTAGGGATCT 60.835 63.158 17.93 0.00 0.00 2.75
2808 6498 2.737830 GACTGGCGGCTAGGGATC 59.262 66.667 17.93 2.61 0.00 3.36
2809 6499 2.844839 GGACTGGCGGCTAGGGAT 60.845 66.667 17.93 0.00 0.00 3.85
2812 6502 3.541713 GAGGGACTGGCGGCTAGG 61.542 72.222 17.93 2.99 41.55 3.02
2813 6503 3.541713 GGAGGGACTGGCGGCTAG 61.542 72.222 12.15 12.15 41.55 3.42
2819 6509 4.106925 CAGCAGGGAGGGACTGGC 62.107 72.222 0.00 0.00 41.55 4.85
2820 6510 4.106925 GCAGCAGGGAGGGACTGG 62.107 72.222 0.00 0.00 41.55 4.00
2821 6511 3.007920 AGCAGCAGGGAGGGACTG 61.008 66.667 0.00 0.00 41.55 3.51
2823 6513 3.791586 GGAGCAGCAGGGAGGGAC 61.792 72.222 0.00 0.00 0.00 4.46
2824 6514 3.870607 TTGGAGCAGCAGGGAGGGA 62.871 63.158 0.00 0.00 0.00 4.20
2825 6515 3.333219 TTGGAGCAGCAGGGAGGG 61.333 66.667 0.00 0.00 0.00 4.30
2826 6516 2.045536 GTTGGAGCAGCAGGGAGG 60.046 66.667 0.00 0.00 0.00 4.30
2827 6517 2.435586 CGTTGGAGCAGCAGGGAG 60.436 66.667 0.00 0.00 0.00 4.30
2828 6518 4.704833 GCGTTGGAGCAGCAGGGA 62.705 66.667 0.00 0.00 37.05 4.20
2831 6521 3.429141 CTGGCGTTGGAGCAGCAG 61.429 66.667 0.00 0.00 39.27 4.24
2891 6581 3.446570 GCCATGGACCTGCAGTGC 61.447 66.667 18.40 8.58 37.33 4.40
2892 6582 3.129502 CGCCATGGACCTGCAGTG 61.130 66.667 18.40 6.81 0.00 3.66
2893 6583 4.415150 CCGCCATGGACCTGCAGT 62.415 66.667 18.40 0.11 42.00 4.40
2897 6587 4.802051 CCACCCGCCATGGACCTG 62.802 72.222 18.40 4.01 42.00 4.00
2899 6589 4.796495 GACCACCCGCCATGGACC 62.796 72.222 18.40 0.00 42.00 4.46
2919 6609 4.457496 ATCACAGGGTCCGCTGCG 62.457 66.667 16.34 16.34 0.00 5.18
2920 6610 2.821366 CATCACAGGGTCCGCTGC 60.821 66.667 10.88 0.00 0.00 5.25
2921 6611 2.821366 GCATCACAGGGTCCGCTG 60.821 66.667 9.54 9.54 0.00 5.18
2922 6612 4.457496 CGCATCACAGGGTCCGCT 62.457 66.667 0.00 0.00 0.00 5.52
2924 6614 3.723235 CTCCGCATCACAGGGTCCG 62.723 68.421 0.00 0.00 0.00 4.79
2925 6615 2.187946 CTCCGCATCACAGGGTCC 59.812 66.667 0.00 0.00 0.00 4.46
2926 6616 2.187946 CCTCCGCATCACAGGGTC 59.812 66.667 0.00 0.00 0.00 4.46
2927 6617 4.101448 GCCTCCGCATCACAGGGT 62.101 66.667 0.00 0.00 34.03 4.34
2928 6618 4.100084 TGCCTCCGCATCACAGGG 62.100 66.667 0.00 0.00 41.12 4.45
2929 6619 2.513204 CTGCCTCCGCATCACAGG 60.513 66.667 0.00 0.00 46.11 4.00
2930 6620 3.200593 GCTGCCTCCGCATCACAG 61.201 66.667 0.00 0.00 46.11 3.66
2933 6623 4.819761 GACGCTGCCTCCGCATCA 62.820 66.667 0.00 0.00 46.11 3.07
2934 6624 4.521062 AGACGCTGCCTCCGCATC 62.521 66.667 0.00 0.00 46.11 3.91
2935 6625 4.521062 GAGACGCTGCCTCCGCAT 62.521 66.667 0.00 0.00 46.11 4.73
2937 6627 3.138930 TATGAGACGCTGCCTCCGC 62.139 63.158 3.91 0.00 0.00 5.54
2938 6628 1.299468 GTATGAGACGCTGCCTCCG 60.299 63.158 3.91 0.00 0.00 4.63
2939 6629 1.299468 CGTATGAGACGCTGCCTCC 60.299 63.158 3.91 0.00 46.27 4.30
2940 6630 4.310672 CGTATGAGACGCTGCCTC 57.689 61.111 0.00 0.00 46.27 4.70
3003 6693 4.496336 ATGAAGGCTCCCAGCGCC 62.496 66.667 2.29 0.00 43.62 6.53
3004 6694 3.207669 CATGAAGGCTCCCAGCGC 61.208 66.667 0.00 0.00 43.62 5.92
3005 6695 1.817099 GTCATGAAGGCTCCCAGCG 60.817 63.158 0.00 0.00 43.62 5.18
3006 6696 1.452833 GGTCATGAAGGCTCCCAGC 60.453 63.158 0.00 0.00 41.46 4.85
3007 6697 1.153289 CGGTCATGAAGGCTCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
3008 6698 2.669133 CCGGTCATGAAGGCTCCCA 61.669 63.158 0.00 0.00 0.00 4.37
3009 6699 2.190578 CCGGTCATGAAGGCTCCC 59.809 66.667 0.00 0.00 0.00 4.30
3010 6700 1.450312 CACCGGTCATGAAGGCTCC 60.450 63.158 2.59 4.09 0.00 4.70
3011 6701 1.450312 CCACCGGTCATGAAGGCTC 60.450 63.158 2.59 0.00 0.00 4.70
3012 6702 2.224159 ACCACCGGTCATGAAGGCT 61.224 57.895 2.59 3.88 0.00 4.58
3013 6703 2.040544 CACCACCGGTCATGAAGGC 61.041 63.158 2.59 0.00 31.02 4.35
3014 6704 0.611200 TACACCACCGGTCATGAAGG 59.389 55.000 19.23 12.58 31.02 3.46
3015 6705 2.007049 GCTACACCACCGGTCATGAAG 61.007 57.143 19.23 9.49 31.02 3.02
3016 6706 0.036765 GCTACACCACCGGTCATGAA 60.037 55.000 19.23 0.00 31.02 2.57
3017 6707 1.594833 GCTACACCACCGGTCATGA 59.405 57.895 19.23 0.00 31.02 3.07
3018 6708 1.809619 CGCTACACCACCGGTCATG 60.810 63.158 2.59 8.85 31.02 3.07
3019 6709 1.327690 ATCGCTACACCACCGGTCAT 61.328 55.000 2.59 0.00 31.02 3.06
3020 6710 1.537814 AATCGCTACACCACCGGTCA 61.538 55.000 2.59 0.00 31.02 4.02
3021 6711 1.082117 CAATCGCTACACCACCGGTC 61.082 60.000 2.59 0.00 31.02 4.79
3022 6712 1.079405 CAATCGCTACACCACCGGT 60.079 57.895 0.00 0.00 35.62 5.28
3023 6713 2.461110 GCAATCGCTACACCACCGG 61.461 63.158 0.00 0.00 34.30 5.28
3024 6714 2.798501 CGCAATCGCTACACCACCG 61.799 63.158 0.00 0.00 35.30 4.94
3025 6715 1.740296 ACGCAATCGCTACACCACC 60.740 57.895 0.00 0.00 39.84 4.61
3026 6716 1.419922 CACGCAATCGCTACACCAC 59.580 57.895 0.00 0.00 39.84 4.16
3027 6717 2.387445 GCACGCAATCGCTACACCA 61.387 57.895 0.00 0.00 39.84 4.17
3028 6718 2.399611 GCACGCAATCGCTACACC 59.600 61.111 0.00 0.00 39.84 4.16
3029 6719 2.020016 CGCACGCAATCGCTACAC 59.980 61.111 0.00 0.00 39.84 2.90
3030 6720 3.848830 GCGCACGCAATCGCTACA 61.849 61.111 10.65 0.00 46.92 2.74
3041 6731 3.857854 GAGCCACTCATGCGCACG 61.858 66.667 14.90 3.71 0.00 5.34
3042 6732 3.503363 GGAGCCACTCATGCGCAC 61.503 66.667 14.90 0.00 31.08 5.34
3044 6734 4.819761 TCGGAGCCACTCATGCGC 62.820 66.667 0.00 0.00 31.08 6.09
3045 6735 2.107750 ATCGGAGCCACTCATGCG 59.892 61.111 0.00 0.00 31.08 4.73
3046 6736 1.890979 CCATCGGAGCCACTCATGC 60.891 63.158 0.00 0.00 31.08 4.06
3047 6737 1.890979 GCCATCGGAGCCACTCATG 60.891 63.158 0.00 0.00 31.08 3.07
3048 6738 2.068821 AGCCATCGGAGCCACTCAT 61.069 57.895 0.00 0.00 31.08 2.90
3049 6739 2.685017 AGCCATCGGAGCCACTCA 60.685 61.111 0.00 0.00 31.08 3.41
3050 6740 2.202987 CAGCCATCGGAGCCACTC 60.203 66.667 0.00 0.00 0.00 3.51
3051 6741 4.479993 GCAGCCATCGGAGCCACT 62.480 66.667 0.00 0.00 0.00 4.00
3059 6749 2.664185 CCAGATCCGCAGCCATCG 60.664 66.667 0.00 0.00 0.00 3.84
3060 6750 2.976903 GCCAGATCCGCAGCCATC 60.977 66.667 0.00 0.00 0.00 3.51
3061 6751 4.923942 CGCCAGATCCGCAGCCAT 62.924 66.667 3.53 0.00 0.00 4.40
3065 6755 2.859273 AAAGGACGCCAGATCCGCAG 62.859 60.000 3.53 0.00 41.52 5.18
3066 6756 2.463589 AAAAGGACGCCAGATCCGCA 62.464 55.000 3.53 0.00 41.52 5.69
3067 6757 1.706287 GAAAAGGACGCCAGATCCGC 61.706 60.000 0.00 0.00 41.52 5.54
3068 6758 0.391130 TGAAAAGGACGCCAGATCCG 60.391 55.000 0.00 0.00 41.52 4.18
3069 6759 1.066143 TCTGAAAAGGACGCCAGATCC 60.066 52.381 0.00 0.00 36.38 3.36
3070 6760 2.386661 TCTGAAAAGGACGCCAGATC 57.613 50.000 0.00 0.00 31.45 2.75
3071 6761 2.420687 GGATCTGAAAAGGACGCCAGAT 60.421 50.000 0.00 0.00 45.77 2.90
3072 6762 1.066143 GGATCTGAAAAGGACGCCAGA 60.066 52.381 0.00 0.00 39.60 3.86
3073 6763 1.373570 GGATCTGAAAAGGACGCCAG 58.626 55.000 0.00 0.00 0.00 4.85
3074 6764 0.391130 CGGATCTGAAAAGGACGCCA 60.391 55.000 0.00 0.00 0.00 5.69
3075 6765 0.391263 ACGGATCTGAAAAGGACGCC 60.391 55.000 9.00 0.00 0.00 5.68
3076 6766 1.000145 GACGGATCTGAAAAGGACGC 59.000 55.000 9.00 0.00 0.00 5.19
3077 6767 2.531206 GAGACGGATCTGAAAAGGACG 58.469 52.381 9.00 0.00 34.34 4.79
3078 6768 2.531206 CGAGACGGATCTGAAAAGGAC 58.469 52.381 9.00 0.00 34.34 3.85
3079 6769 2.941453 CGAGACGGATCTGAAAAGGA 57.059 50.000 9.00 0.00 34.34 3.36
3092 6782 2.494918 CAAGGCCCTACCGAGACG 59.505 66.667 0.00 0.00 46.52 4.18
3093 6783 2.901042 CCAAGGCCCTACCGAGAC 59.099 66.667 0.00 0.00 46.52 3.36
3094 6784 3.081409 GCCAAGGCCCTACCGAGA 61.081 66.667 0.00 0.00 46.52 4.04
3123 6813 3.827898 CTCACCGGTCCTCCTCGC 61.828 72.222 2.59 0.00 0.00 5.03
3124 6814 3.141488 CCTCACCGGTCCTCCTCG 61.141 72.222 2.59 0.00 0.00 4.63
3125 6815 2.760385 CCCTCACCGGTCCTCCTC 60.760 72.222 2.59 0.00 0.00 3.71
3126 6816 4.400251 CCCCTCACCGGTCCTCCT 62.400 72.222 2.59 0.00 0.00 3.69
3135 6825 4.785453 CTCAAGCCGCCCCTCACC 62.785 72.222 0.00 0.00 0.00 4.02
3136 6826 4.785453 CCTCAAGCCGCCCCTCAC 62.785 72.222 0.00 0.00 0.00 3.51
3141 6831 4.847444 GAGAGCCTCAAGCCGCCC 62.847 72.222 0.00 0.00 45.47 6.13
3142 6832 2.427245 TAGAGAGCCTCAAGCCGCC 61.427 63.158 0.00 0.00 45.47 6.13
3143 6833 1.227118 GTAGAGAGCCTCAAGCCGC 60.227 63.158 0.00 0.00 45.47 6.53
3144 6834 1.439644 GGTAGAGAGCCTCAAGCCG 59.560 63.158 0.00 0.00 45.47 5.52
3145 6835 1.439644 CGGTAGAGAGCCTCAAGCC 59.560 63.158 0.00 3.47 45.47 4.35
3146 6836 1.439644 CCGGTAGAGAGCCTCAAGC 59.560 63.158 0.00 0.00 44.25 4.01
3147 6837 1.323271 TGCCGGTAGAGAGCCTCAAG 61.323 60.000 1.90 0.00 32.06 3.02
3148 6838 0.687757 ATGCCGGTAGAGAGCCTCAA 60.688 55.000 1.90 0.00 32.06 3.02
3149 6839 1.075970 ATGCCGGTAGAGAGCCTCA 60.076 57.895 1.90 0.00 32.06 3.86
3150 6840 1.365633 CATGCCGGTAGAGAGCCTC 59.634 63.158 1.90 0.00 0.00 4.70
3151 6841 2.801631 GCATGCCGGTAGAGAGCCT 61.802 63.158 6.36 0.00 0.00 4.58
3152 6842 2.280457 GCATGCCGGTAGAGAGCC 60.280 66.667 6.36 0.00 0.00 4.70
3153 6843 2.280457 GGCATGCCGGTAGAGAGC 60.280 66.667 23.48 1.61 0.00 4.09
3184 6874 2.486042 GAGCCTCGTCGTGGAGAC 59.514 66.667 17.27 3.74 46.16 3.36
3185 6875 2.750637 GGAGCCTCGTCGTGGAGA 60.751 66.667 17.27 0.00 36.08 3.71
3186 6876 4.180946 CGGAGCCTCGTCGTGGAG 62.181 72.222 17.27 1.51 0.00 3.86
3188 6878 3.966026 GAACGGAGCCTCGTCGTGG 62.966 68.421 9.00 9.00 43.07 4.94
3189 6879 2.504244 GAACGGAGCCTCGTCGTG 60.504 66.667 2.43 0.00 43.07 4.35
3190 6880 4.099170 CGAACGGAGCCTCGTCGT 62.099 66.667 2.43 0.00 43.07 4.34
3191 6881 4.831307 CCGAACGGAGCCTCGTCG 62.831 72.222 7.53 7.92 43.07 5.12
3192 6882 3.278592 AACCGAACGGAGCCTCGTC 62.279 63.158 20.14 0.00 43.07 4.20
3193 6883 3.278592 GAACCGAACGGAGCCTCGT 62.279 63.158 20.14 0.00 46.08 4.18
3194 6884 2.506438 GAACCGAACGGAGCCTCG 60.506 66.667 20.14 0.00 38.96 4.63
3195 6885 2.125633 GGAACCGAACGGAGCCTC 60.126 66.667 20.14 9.78 38.96 4.70
3196 6886 2.920912 TGGAACCGAACGGAGCCT 60.921 61.111 20.14 1.35 38.96 4.58
3197 6887 2.434359 CTGGAACCGAACGGAGCC 60.434 66.667 20.14 18.21 38.96 4.70
3198 6888 3.119096 GCTGGAACCGAACGGAGC 61.119 66.667 20.14 13.63 38.96 4.70
3199 6889 2.434359 GGCTGGAACCGAACGGAG 60.434 66.667 20.14 7.69 38.96 4.63
3200 6890 3.234630 CTGGCTGGAACCGAACGGA 62.235 63.158 20.14 0.00 38.96 4.69
3201 6891 2.742372 CTGGCTGGAACCGAACGG 60.742 66.667 11.83 11.83 42.03 4.44
3202 6892 3.423154 GCTGGCTGGAACCGAACG 61.423 66.667 0.00 0.00 0.00 3.95
3203 6893 2.032681 AGCTGGCTGGAACCGAAC 59.967 61.111 0.00 0.00 0.00 3.95
3204 6894 2.032528 CAGCTGGCTGGAACCGAA 59.967 61.111 14.11 0.00 40.17 4.30
3205 6895 4.704833 GCAGCTGGCTGGAACCGA 62.705 66.667 21.76 0.00 43.77 4.69
3214 6904 0.609131 TTCCCAACTTAGCAGCTGGC 60.609 55.000 17.12 7.98 45.30 4.85
3215 6905 1.909700 TTTCCCAACTTAGCAGCTGG 58.090 50.000 17.12 0.31 36.16 4.85
3216 6906 2.887152 ACTTTTCCCAACTTAGCAGCTG 59.113 45.455 10.11 10.11 0.00 4.24
3217 6907 3.149981 GACTTTTCCCAACTTAGCAGCT 58.850 45.455 0.00 0.00 0.00 4.24
3218 6908 3.149981 AGACTTTTCCCAACTTAGCAGC 58.850 45.455 0.00 0.00 0.00 5.25
3219 6909 6.877611 TTTAGACTTTTCCCAACTTAGCAG 57.122 37.500 0.00 0.00 0.00 4.24
3220 6910 7.833285 ATTTTAGACTTTTCCCAACTTAGCA 57.167 32.000 0.00 0.00 0.00 3.49
3224 6914 9.209048 AGGTTTATTTTAGACTTTTCCCAACTT 57.791 29.630 0.00 0.00 0.00 2.66
3225 6915 8.777578 AGGTTTATTTTAGACTTTTCCCAACT 57.222 30.769 0.00 0.00 0.00 3.16
3226 6916 9.256477 CAAGGTTTATTTTAGACTTTTCCCAAC 57.744 33.333 0.00 0.00 0.00 3.77
3227 6917 9.203163 TCAAGGTTTATTTTAGACTTTTCCCAA 57.797 29.630 0.00 0.00 0.00 4.12
3228 6918 8.770010 TCAAGGTTTATTTTAGACTTTTCCCA 57.230 30.769 0.00 0.00 0.00 4.37
3229 6919 9.472361 GTTCAAGGTTTATTTTAGACTTTTCCC 57.528 33.333 0.00 0.00 0.00 3.97
3243 6933 8.135529 GCTTTTGTCTACAAGTTCAAGGTTTAT 58.864 33.333 6.97 0.00 37.15 1.40
3244 6934 7.338449 AGCTTTTGTCTACAAGTTCAAGGTTTA 59.662 33.333 4.64 0.00 37.15 2.01
3245 6935 6.152831 AGCTTTTGTCTACAAGTTCAAGGTTT 59.847 34.615 4.64 0.00 37.15 3.27
3246 6936 5.652452 AGCTTTTGTCTACAAGTTCAAGGTT 59.348 36.000 4.64 0.00 37.15 3.50
3247 6937 5.193679 AGCTTTTGTCTACAAGTTCAAGGT 58.806 37.500 4.64 4.64 37.15 3.50
3248 6938 5.757850 AGCTTTTGTCTACAAGTTCAAGG 57.242 39.130 6.97 0.00 37.15 3.61
3249 6939 9.387123 GATTTAGCTTTTGTCTACAAGTTCAAG 57.613 33.333 0.00 0.00 37.15 3.02
3250 6940 8.898761 TGATTTAGCTTTTGTCTACAAGTTCAA 58.101 29.630 0.00 0.00 37.15 2.69
3251 6941 8.445275 TGATTTAGCTTTTGTCTACAAGTTCA 57.555 30.769 0.00 0.00 37.15 3.18
3252 6942 9.730420 TTTGATTTAGCTTTTGTCTACAAGTTC 57.270 29.630 0.00 0.00 37.15 3.01
3253 6943 9.516314 GTTTGATTTAGCTTTTGTCTACAAGTT 57.484 29.630 0.00 0.00 37.15 2.66
3254 6944 8.135529 GGTTTGATTTAGCTTTTGTCTACAAGT 58.864 33.333 0.00 0.00 37.15 3.16
3255 6945 7.595130 GGGTTTGATTTAGCTTTTGTCTACAAG 59.405 37.037 0.00 0.00 37.15 3.16
3256 6946 7.286775 AGGGTTTGATTTAGCTTTTGTCTACAA 59.713 33.333 0.00 0.00 0.00 2.41
3257 6947 6.775629 AGGGTTTGATTTAGCTTTTGTCTACA 59.224 34.615 0.00 0.00 0.00 2.74
3258 6948 7.040686 TCAGGGTTTGATTTAGCTTTTGTCTAC 60.041 37.037 0.00 0.00 0.00 2.59
3259 6949 7.001674 TCAGGGTTTGATTTAGCTTTTGTCTA 58.998 34.615 0.00 0.00 0.00 2.59
3260 6950 5.833131 TCAGGGTTTGATTTAGCTTTTGTCT 59.167 36.000 0.00 0.00 0.00 3.41
3261 6951 6.084326 TCAGGGTTTGATTTAGCTTTTGTC 57.916 37.500 0.00 0.00 0.00 3.18
3262 6952 6.478512 TTCAGGGTTTGATTTAGCTTTTGT 57.521 33.333 0.00 0.00 35.27 2.83
3263 6953 7.967890 AATTCAGGGTTTGATTTAGCTTTTG 57.032 32.000 0.00 0.00 35.27 2.44
3264 6954 8.839343 CAAAATTCAGGGTTTGATTTAGCTTTT 58.161 29.630 0.00 0.00 36.96 2.27
3265 6955 8.210265 TCAAAATTCAGGGTTTGATTTAGCTTT 58.790 29.630 0.00 0.00 38.50 3.51
3266 6956 7.734942 TCAAAATTCAGGGTTTGATTTAGCTT 58.265 30.769 0.00 0.00 38.50 3.74
3267 6957 7.301868 TCAAAATTCAGGGTTTGATTTAGCT 57.698 32.000 0.00 0.00 38.50 3.32
3268 6958 7.961325 TTCAAAATTCAGGGTTTGATTTAGC 57.039 32.000 0.11 0.00 41.90 3.09
3269 6959 9.154847 GGATTCAAAATTCAGGGTTTGATTTAG 57.845 33.333 0.11 0.00 41.90 1.85
3270 6960 8.879227 AGGATTCAAAATTCAGGGTTTGATTTA 58.121 29.630 0.11 0.00 41.90 1.40
3271 6961 7.748677 AGGATTCAAAATTCAGGGTTTGATTT 58.251 30.769 0.11 0.00 41.90 2.17
3272 6962 7.320384 AGGATTCAAAATTCAGGGTTTGATT 57.680 32.000 0.11 0.00 41.90 2.57
3273 6963 6.940430 AGGATTCAAAATTCAGGGTTTGAT 57.060 33.333 0.11 0.00 41.90 2.57
3274 6964 6.745794 AAGGATTCAAAATTCAGGGTTTGA 57.254 33.333 0.00 0.00 40.93 2.69
3275 6965 8.900983 TTTAAGGATTCAAAATTCAGGGTTTG 57.099 30.769 0.00 0.00 36.30 2.93
3277 6967 9.725019 GATTTTAAGGATTCAAAATTCAGGGTT 57.275 29.630 0.00 0.00 35.14 4.11
3278 6968 8.879227 TGATTTTAAGGATTCAAAATTCAGGGT 58.121 29.630 0.00 0.00 35.14 4.34
3279 6969 9.374838 CTGATTTTAAGGATTCAAAATTCAGGG 57.625 33.333 11.98 0.00 35.14 4.45
3280 6970 8.876790 GCTGATTTTAAGGATTCAAAATTCAGG 58.123 33.333 17.08 7.01 35.14 3.86
3281 6971 9.426837 TGCTGATTTTAAGGATTCAAAATTCAG 57.573 29.630 13.93 13.93 35.14 3.02
3282 6972 9.206870 GTGCTGATTTTAAGGATTCAAAATTCA 57.793 29.630 0.00 0.00 35.14 2.57
3283 6973 9.206870 TGTGCTGATTTTAAGGATTCAAAATTC 57.793 29.630 0.00 0.00 35.14 2.17
3284 6974 8.992073 GTGTGCTGATTTTAAGGATTCAAAATT 58.008 29.630 0.00 0.00 35.14 1.82
3285 6975 8.370182 AGTGTGCTGATTTTAAGGATTCAAAAT 58.630 29.630 0.00 0.00 37.12 1.82
3286 6976 7.652909 CAGTGTGCTGATTTTAAGGATTCAAAA 59.347 33.333 0.00 0.00 45.28 2.44
3287 6977 7.014134 TCAGTGTGCTGATTTTAAGGATTCAAA 59.986 33.333 0.00 0.00 45.94 2.69
3288 6978 6.489700 TCAGTGTGCTGATTTTAAGGATTCAA 59.510 34.615 0.00 0.00 45.94 2.69
3289 6979 6.003326 TCAGTGTGCTGATTTTAAGGATTCA 58.997 36.000 0.00 0.00 45.94 2.57
3290 6980 6.500684 TCAGTGTGCTGATTTTAAGGATTC 57.499 37.500 0.00 0.00 45.94 2.52
3303 6993 4.993584 GGGATCATATAGTTCAGTGTGCTG 59.006 45.833 0.00 0.00 43.87 4.41
3304 6994 4.262207 CGGGATCATATAGTTCAGTGTGCT 60.262 45.833 0.00 0.00 0.00 4.40
3305 6995 3.990469 CGGGATCATATAGTTCAGTGTGC 59.010 47.826 0.00 0.00 0.00 4.57
3306 6996 4.039245 ACCGGGATCATATAGTTCAGTGTG 59.961 45.833 6.32 0.00 0.00 3.82
3307 6997 4.223953 ACCGGGATCATATAGTTCAGTGT 58.776 43.478 6.32 0.00 0.00 3.55
3308 6998 4.524714 AGACCGGGATCATATAGTTCAGTG 59.475 45.833 6.32 0.00 0.00 3.66
3309 6999 4.742012 AGACCGGGATCATATAGTTCAGT 58.258 43.478 6.32 0.00 0.00 3.41
3310 7000 7.411486 AATAGACCGGGATCATATAGTTCAG 57.589 40.000 6.32 0.00 0.00 3.02
3311 7001 7.792364 AAATAGACCGGGATCATATAGTTCA 57.208 36.000 6.32 0.00 0.00 3.18
3316 7006 9.947189 AGGTATAAAATAGACCGGGATCATATA 57.053 33.333 6.32 0.00 44.58 0.86
3317 7007 8.855804 AGGTATAAAATAGACCGGGATCATAT 57.144 34.615 6.32 0.00 44.58 1.78
3318 7008 8.537016 CAAGGTATAAAATAGACCGGGATCATA 58.463 37.037 6.32 0.00 44.58 2.15
3319 7009 7.236847 TCAAGGTATAAAATAGACCGGGATCAT 59.763 37.037 6.32 0.00 44.58 2.45
3320 7010 6.555738 TCAAGGTATAAAATAGACCGGGATCA 59.444 38.462 6.32 0.00 44.58 2.92
3321 7011 7.001099 TCAAGGTATAAAATAGACCGGGATC 57.999 40.000 6.32 0.00 44.58 3.36
3322 7012 6.557633 ACTCAAGGTATAAAATAGACCGGGAT 59.442 38.462 6.32 0.00 44.58 3.85
3323 7013 5.901276 ACTCAAGGTATAAAATAGACCGGGA 59.099 40.000 6.32 0.00 44.58 5.14
3324 7014 5.989777 CACTCAAGGTATAAAATAGACCGGG 59.010 44.000 6.32 0.00 44.58 5.73
3325 7015 5.465724 GCACTCAAGGTATAAAATAGACCGG 59.534 44.000 0.00 0.00 44.58 5.28
3326 7016 6.046593 TGCACTCAAGGTATAAAATAGACCG 58.953 40.000 0.00 0.00 44.58 4.79
3327 7017 8.451908 AATGCACTCAAGGTATAAAATAGACC 57.548 34.615 0.00 0.00 40.32 3.85
3328 7018 8.560374 GGAATGCACTCAAGGTATAAAATAGAC 58.440 37.037 0.00 0.00 0.00 2.59
3329 7019 7.719633 GGGAATGCACTCAAGGTATAAAATAGA 59.280 37.037 0.00 0.00 0.00 1.98
3330 7020 7.502226 TGGGAATGCACTCAAGGTATAAAATAG 59.498 37.037 0.00 0.00 0.00 1.73
3331 7021 7.350382 TGGGAATGCACTCAAGGTATAAAATA 58.650 34.615 0.00 0.00 0.00 1.40
3332 7022 6.194235 TGGGAATGCACTCAAGGTATAAAAT 58.806 36.000 0.00 0.00 0.00 1.82
3333 7023 5.575157 TGGGAATGCACTCAAGGTATAAAA 58.425 37.500 0.00 0.00 0.00 1.52
3334 7024 5.186256 TGGGAATGCACTCAAGGTATAAA 57.814 39.130 0.00 0.00 0.00 1.40
3335 7025 4.853468 TGGGAATGCACTCAAGGTATAA 57.147 40.909 0.00 0.00 0.00 0.98
3336 7026 4.853468 TTGGGAATGCACTCAAGGTATA 57.147 40.909 0.00 0.00 0.00 1.47
3337 7027 3.737559 TTGGGAATGCACTCAAGGTAT 57.262 42.857 0.00 0.00 0.00 2.73
3338 7028 3.153919 GTTTGGGAATGCACTCAAGGTA 58.846 45.455 0.00 0.00 31.67 3.08
3339 7029 1.963515 GTTTGGGAATGCACTCAAGGT 59.036 47.619 0.00 0.00 31.67 3.50
3340 7030 1.962807 TGTTTGGGAATGCACTCAAGG 59.037 47.619 0.00 0.00 31.67 3.61
3341 7031 3.553508 CCTTGTTTGGGAATGCACTCAAG 60.554 47.826 0.00 0.00 31.67 3.02
3342 7032 2.364970 CCTTGTTTGGGAATGCACTCAA 59.635 45.455 0.00 0.00 0.00 3.02
3343 7033 1.962807 CCTTGTTTGGGAATGCACTCA 59.037 47.619 0.00 0.00 0.00 3.41
3344 7034 2.238521 TCCTTGTTTGGGAATGCACTC 58.761 47.619 0.00 0.00 0.00 3.51
3345 7035 2.380064 TCCTTGTTTGGGAATGCACT 57.620 45.000 0.00 0.00 0.00 4.40
3346 7036 3.244181 ACAATCCTTGTTTGGGAATGCAC 60.244 43.478 0.00 0.00 42.22 4.57
3347 7037 2.971330 ACAATCCTTGTTTGGGAATGCA 59.029 40.909 0.00 0.00 42.22 3.96
3348 7038 3.683365 ACAATCCTTGTTTGGGAATGC 57.317 42.857 0.00 0.00 42.22 3.56
3359 7049 8.647143 ACTACAAACATTCAAAACAATCCTTG 57.353 30.769 0.00 0.00 0.00 3.61
3360 7050 9.965824 CTACTACAAACATTCAAAACAATCCTT 57.034 29.630 0.00 0.00 0.00 3.36
3361 7051 9.349713 TCTACTACAAACATTCAAAACAATCCT 57.650 29.630 0.00 0.00 0.00 3.24
3381 7071 8.988060 TGGTCAATGAATTTGGTAGATCTACTA 58.012 33.333 27.68 21.60 35.92 1.82
3382 7072 7.861629 TGGTCAATGAATTTGGTAGATCTACT 58.138 34.615 27.68 11.43 35.92 2.57
3383 7073 7.227512 CCTGGTCAATGAATTTGGTAGATCTAC 59.772 40.741 22.47 22.47 35.92 2.59
3384 7074 7.127186 TCCTGGTCAATGAATTTGGTAGATCTA 59.873 37.037 0.00 0.00 35.92 1.98
3385 7075 6.069440 TCCTGGTCAATGAATTTGGTAGATCT 60.069 38.462 0.00 0.00 35.92 2.75
3386 7076 6.122277 TCCTGGTCAATGAATTTGGTAGATC 58.878 40.000 0.00 0.00 35.92 2.75
3387 7077 6.069440 TCTCCTGGTCAATGAATTTGGTAGAT 60.069 38.462 0.00 0.00 35.92 1.98
3388 7078 5.250543 TCTCCTGGTCAATGAATTTGGTAGA 59.749 40.000 0.00 0.00 35.92 2.59
3389 7079 5.500234 TCTCCTGGTCAATGAATTTGGTAG 58.500 41.667 0.00 0.00 35.92 3.18
3390 7080 5.512942 TCTCCTGGTCAATGAATTTGGTA 57.487 39.130 0.00 0.00 35.92 3.25
3391 7081 4.387026 TCTCCTGGTCAATGAATTTGGT 57.613 40.909 0.00 0.00 35.92 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.