Multiple sequence alignment - TraesCS1A01G288800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G288800 chr1A 100.000 4043 0 0 1 4043 486055449 486051407 0.000000e+00 7467
1 TraesCS1A01G288800 chr1A 84.667 300 44 2 1128 1425 486053662 486053363 8.500000e-77 298
2 TraesCS1A01G288800 chr1A 84.667 300 44 2 1788 2087 486054322 486054025 8.500000e-77 298
3 TraesCS1A01G288800 chr1B 88.241 2160 140 59 1746 3872 518541016 518538938 0.000000e+00 2477
4 TraesCS1A01G288800 chr1B 91.881 776 50 11 651 1417 518542034 518541263 0.000000e+00 1072
5 TraesCS1A01G288800 chr1B 79.596 495 80 11 1809 2284 518541532 518541040 6.470000e-88 335
6 TraesCS1A01G288800 chr1B 86.218 312 38 5 1123 1430 518540979 518540669 2.330000e-87 333
7 TraesCS1A01G288800 chr1B 88.199 161 14 4 345 502 518542535 518542377 1.920000e-43 187
8 TraesCS1A01G288800 chr1B 81.768 181 25 6 485 662 518542225 518542050 1.170000e-30 145
9 TraesCS1A01G288800 chr1D 91.831 1163 58 11 1747 2880 386165562 386164408 0.000000e+00 1587
10 TraesCS1A01G288800 chr1D 87.448 1195 117 21 516 1688 386166709 386165526 0.000000e+00 1345
11 TraesCS1A01G288800 chr1D 92.437 595 16 5 2831 3398 386164408 386163816 0.000000e+00 822
12 TraesCS1A01G288800 chr1D 82.828 594 41 23 3473 4043 386163798 386163243 3.660000e-130 475
13 TraesCS1A01G288800 chr1D 93.939 264 16 0 259 522 386167891 386167628 2.260000e-107 399
14 TraesCS1A01G288800 chr1D 84.967 306 36 9 1132 1430 386165514 386165212 6.570000e-78 302
15 TraesCS1A01G288800 chr1D 85.556 270 38 1 1818 2087 386166065 386165797 8.560000e-72 281
16 TraesCS1A01G288800 chr4A 92.886 492 35 0 1746 2237 322883983 322884474 0.000000e+00 715
17 TraesCS1A01G288800 chr4A 90.734 259 23 1 1 259 671805444 671805701 1.080000e-90 344
18 TraesCS1A01G288800 chr4A 92.544 228 16 1 2347 2573 322884479 322884706 3.900000e-85 326
19 TraesCS1A01G288800 chr4A 83.660 306 46 4 1123 1425 322884020 322884324 6.610000e-73 285
20 TraesCS1A01G288800 chr3B 84.072 609 68 22 2448 3048 605677379 605676792 9.810000e-156 560
21 TraesCS1A01G288800 chr3D 83.059 608 78 21 2448 3048 458628656 458628067 2.770000e-146 529
22 TraesCS1A01G288800 chr3A 82.955 616 75 24 2448 3048 600931695 600931095 2.770000e-146 529
23 TraesCS1A01G288800 chr2B 90.351 228 20 2 2347 2573 306847792 306847566 8.500000e-77 298
24 TraesCS1A01G288800 chr2B 95.604 91 4 0 1746 1836 306847947 306847857 3.260000e-31 147
25 TraesCS1A01G288800 chr4D 82.941 340 38 13 1301 1620 332131329 332131668 5.110000e-74 289
26 TraesCS1A01G288800 chr4D 93.143 175 12 0 2399 2573 332131683 332131857 1.440000e-64 257
27 TraesCS1A01G288800 chr6D 82.647 340 39 13 1301 1620 73252786 73252447 2.380000e-72 283
28 TraesCS1A01G288800 chr6D 93.143 175 12 0 2399 2573 73252432 73252258 1.440000e-64 257
29 TraesCS1A01G288800 chr5D 82.353 340 40 14 1301 1620 339384049 339384388 1.110000e-70 278
30 TraesCS1A01G288800 chr5D 93.143 175 12 0 2399 2573 339384403 339384577 1.440000e-64 257
31 TraesCS1A01G288800 chr2D 93.143 175 12 0 2399 2573 147703511 147703685 1.440000e-64 257


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G288800 chr1A 486051407 486055449 4042 True 2687.666667 7467 89.778000 1 4043 3 chr1A.!!$R1 4042
1 TraesCS1A01G288800 chr1B 518538938 518542535 3597 True 758.166667 2477 85.983833 345 3872 6 chr1B.!!$R1 3527
2 TraesCS1A01G288800 chr1D 386163243 386167891 4648 True 744.428571 1587 88.429429 259 4043 7 chr1D.!!$R1 3784
3 TraesCS1A01G288800 chr4A 322883983 322884706 723 False 442.000000 715 89.696667 1123 2573 3 chr4A.!!$F2 1450
4 TraesCS1A01G288800 chr3B 605676792 605677379 587 True 560.000000 560 84.072000 2448 3048 1 chr3B.!!$R1 600
5 TraesCS1A01G288800 chr3D 458628067 458628656 589 True 529.000000 529 83.059000 2448 3048 1 chr3D.!!$R1 600
6 TraesCS1A01G288800 chr3A 600931095 600931695 600 True 529.000000 529 82.955000 2448 3048 1 chr3A.!!$R1 600
7 TraesCS1A01G288800 chr4D 332131329 332131857 528 False 273.000000 289 88.042000 1301 2573 2 chr4D.!!$F1 1272
8 TraesCS1A01G288800 chr6D 73252258 73252786 528 True 270.000000 283 87.895000 1301 2573 2 chr6D.!!$R1 1272
9 TraesCS1A01G288800 chr5D 339384049 339384577 528 False 267.500000 278 87.748000 1301 2573 2 chr5D.!!$F1 1272

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 108 0.035056 AGTAGGGGCACATGTTGAGC 60.035 55.0 0.0 0.0 33.11 4.26 F
1430 2566 0.031178 CTGGTGCAGTTTGCCTGTTC 59.969 55.0 0.0 0.0 44.23 3.18 F
1643 2800 0.895530 TCAGGACTAGCTTTCGGGTG 59.104 55.0 0.0 0.0 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1632 2789 0.466543 TGTGTACACACCCGAAAGCT 59.533 50.0 24.62 0.00 45.88 3.74 R
3021 4341 1.450360 AAGACCTGGGCTTCTCCTTT 58.550 50.0 9.59 0.00 34.39 3.11 R
3450 4795 2.244486 AAGACTCCATGGAGCTCAGA 57.756 50.0 36.78 4.15 45.54 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.419522 TTTTCTGAAATCTTGGCGCTAC 57.580 40.909 7.64 0.00 0.00 3.58
32 33 2.024176 TCTGAAATCTTGGCGCTACC 57.976 50.000 7.64 0.00 39.84 3.18
33 34 0.652592 CTGAAATCTTGGCGCTACCG 59.347 55.000 7.64 0.00 43.94 4.02
34 35 0.248012 TGAAATCTTGGCGCTACCGA 59.752 50.000 7.64 0.00 43.94 4.69
35 36 1.338294 TGAAATCTTGGCGCTACCGAA 60.338 47.619 7.64 0.00 43.94 4.30
36 37 1.735571 GAAATCTTGGCGCTACCGAAA 59.264 47.619 7.64 0.00 43.94 3.46
37 38 2.038387 AATCTTGGCGCTACCGAAAT 57.962 45.000 7.64 0.00 43.94 2.17
38 39 1.583054 ATCTTGGCGCTACCGAAATC 58.417 50.000 7.64 0.00 43.94 2.17
39 40 0.804544 TCTTGGCGCTACCGAAATCG 60.805 55.000 7.64 0.00 43.94 3.34
54 55 2.984623 TCGGCAGAAGCAGAGCAT 59.015 55.556 0.00 0.00 44.61 3.79
55 56 1.153489 TCGGCAGAAGCAGAGCATC 60.153 57.895 0.00 0.00 44.61 3.91
76 77 6.647334 ATCTGTGTAGATGAGGTGATGTAG 57.353 41.667 0.00 0.00 42.04 2.74
77 78 4.339530 TCTGTGTAGATGAGGTGATGTAGC 59.660 45.833 0.00 0.00 0.00 3.58
78 79 3.384789 TGTGTAGATGAGGTGATGTAGCC 59.615 47.826 0.00 0.00 0.00 3.93
79 80 3.384789 GTGTAGATGAGGTGATGTAGCCA 59.615 47.826 0.00 0.00 0.00 4.75
80 81 3.638627 TGTAGATGAGGTGATGTAGCCAG 59.361 47.826 0.00 0.00 0.00 4.85
81 82 2.045524 AGATGAGGTGATGTAGCCAGG 58.954 52.381 0.00 0.00 0.00 4.45
82 83 2.042464 GATGAGGTGATGTAGCCAGGA 58.958 52.381 0.00 0.00 0.00 3.86
83 84 1.489481 TGAGGTGATGTAGCCAGGAG 58.511 55.000 0.00 0.00 0.00 3.69
84 85 0.105778 GAGGTGATGTAGCCAGGAGC 59.894 60.000 0.00 0.00 44.25 4.70
93 94 3.541713 GCCAGGAGCGGGAGTAGG 61.542 72.222 0.00 0.00 0.00 3.18
94 95 2.840102 CCAGGAGCGGGAGTAGGG 60.840 72.222 0.00 0.00 0.00 3.53
95 96 2.840102 CAGGAGCGGGAGTAGGGG 60.840 72.222 0.00 0.00 0.00 4.79
96 97 4.862823 AGGAGCGGGAGTAGGGGC 62.863 72.222 0.00 0.00 0.00 5.80
98 99 3.851128 GAGCGGGAGTAGGGGCAC 61.851 72.222 0.00 0.00 0.00 5.01
99 100 4.715130 AGCGGGAGTAGGGGCACA 62.715 66.667 0.00 0.00 0.00 4.57
100 101 3.480133 GCGGGAGTAGGGGCACAT 61.480 66.667 0.00 0.00 0.00 3.21
101 102 2.505982 CGGGAGTAGGGGCACATG 59.494 66.667 0.00 0.00 0.00 3.21
102 103 2.367202 CGGGAGTAGGGGCACATGT 61.367 63.158 0.00 0.00 0.00 3.21
103 104 1.910580 CGGGAGTAGGGGCACATGTT 61.911 60.000 0.00 0.00 0.00 2.71
104 105 0.394352 GGGAGTAGGGGCACATGTTG 60.394 60.000 0.00 0.00 0.00 3.33
105 106 0.618458 GGAGTAGGGGCACATGTTGA 59.382 55.000 0.00 0.00 0.00 3.18
106 107 1.407437 GGAGTAGGGGCACATGTTGAG 60.407 57.143 0.00 0.00 0.00 3.02
107 108 0.035056 AGTAGGGGCACATGTTGAGC 60.035 55.000 0.00 0.00 33.11 4.26
111 112 2.870372 GGCACATGTTGAGCCGAC 59.130 61.111 9.69 0.00 43.74 4.79
112 113 1.965930 GGCACATGTTGAGCCGACA 60.966 57.895 9.69 0.00 43.74 4.35
113 114 1.514678 GGCACATGTTGAGCCGACAA 61.515 55.000 9.69 0.00 43.74 3.18
114 115 0.310543 GCACATGTTGAGCCGACAAA 59.689 50.000 0.00 0.00 31.00 2.83
115 116 1.068333 GCACATGTTGAGCCGACAAAT 60.068 47.619 0.00 0.00 31.00 2.32
116 117 2.587956 CACATGTTGAGCCGACAAATG 58.412 47.619 0.00 0.00 31.00 2.32
117 118 1.068333 ACATGTTGAGCCGACAAATGC 60.068 47.619 0.00 0.00 31.00 3.56
118 119 1.200716 CATGTTGAGCCGACAAATGCT 59.799 47.619 0.16 0.00 41.42 3.79
119 120 1.317613 TGTTGAGCCGACAAATGCTT 58.682 45.000 0.00 0.00 38.11 3.91
120 121 1.001487 TGTTGAGCCGACAAATGCTTG 60.001 47.619 0.00 0.00 38.11 4.01
121 122 0.597568 TTGAGCCGACAAATGCTTGG 59.402 50.000 0.00 0.00 38.11 3.61
122 123 0.250684 TGAGCCGACAAATGCTTGGA 60.251 50.000 0.00 0.00 38.11 3.53
123 124 0.169009 GAGCCGACAAATGCTTGGAC 59.831 55.000 0.00 0.00 38.11 4.02
124 125 0.250901 AGCCGACAAATGCTTGGACT 60.251 50.000 0.00 0.00 36.82 3.85
125 126 0.169009 GCCGACAAATGCTTGGACTC 59.831 55.000 0.00 0.00 36.82 3.36
126 127 1.522668 CCGACAAATGCTTGGACTCA 58.477 50.000 0.00 0.00 36.82 3.41
127 128 1.197721 CCGACAAATGCTTGGACTCAC 59.802 52.381 0.00 0.00 36.82 3.51
128 129 1.197721 CGACAAATGCTTGGACTCACC 59.802 52.381 0.00 0.00 36.82 4.02
129 130 2.508526 GACAAATGCTTGGACTCACCT 58.491 47.619 0.00 0.00 39.86 4.00
130 131 2.887152 GACAAATGCTTGGACTCACCTT 59.113 45.455 0.00 0.00 39.86 3.50
131 132 2.887152 ACAAATGCTTGGACTCACCTTC 59.113 45.455 0.00 0.00 39.86 3.46
132 133 3.152341 CAAATGCTTGGACTCACCTTCT 58.848 45.455 0.00 0.00 39.86 2.85
133 134 2.777832 ATGCTTGGACTCACCTTCTC 57.222 50.000 0.00 0.00 39.86 2.87
134 135 1.722034 TGCTTGGACTCACCTTCTCT 58.278 50.000 0.00 0.00 39.86 3.10
135 136 2.050144 TGCTTGGACTCACCTTCTCTT 58.950 47.619 0.00 0.00 39.86 2.85
136 137 2.224378 TGCTTGGACTCACCTTCTCTTG 60.224 50.000 0.00 0.00 39.86 3.02
137 138 2.421619 CTTGGACTCACCTTCTCTTGC 58.578 52.381 0.00 0.00 39.86 4.01
138 139 1.423584 TGGACTCACCTTCTCTTGCA 58.576 50.000 0.00 0.00 39.86 4.08
139 140 1.768275 TGGACTCACCTTCTCTTGCAA 59.232 47.619 0.00 0.00 39.86 4.08
140 141 2.373169 TGGACTCACCTTCTCTTGCAAT 59.627 45.455 0.00 0.00 39.86 3.56
141 142 3.181440 TGGACTCACCTTCTCTTGCAATT 60.181 43.478 0.00 0.00 39.86 2.32
142 143 3.823304 GGACTCACCTTCTCTTGCAATTT 59.177 43.478 0.00 0.00 35.41 1.82
143 144 4.320788 GGACTCACCTTCTCTTGCAATTTG 60.321 45.833 0.00 0.00 35.41 2.32
144 145 3.571401 ACTCACCTTCTCTTGCAATTTGG 59.429 43.478 0.00 1.11 0.00 3.28
145 146 2.297033 TCACCTTCTCTTGCAATTTGGC 59.703 45.455 0.00 0.00 0.00 4.52
146 147 2.036217 CACCTTCTCTTGCAATTTGGCA 59.964 45.455 0.00 0.00 43.19 4.92
147 148 2.298163 ACCTTCTCTTGCAATTTGGCAG 59.702 45.455 0.00 0.00 45.88 4.85
148 149 2.298163 CCTTCTCTTGCAATTTGGCAGT 59.702 45.455 0.00 0.00 45.88 4.40
149 150 3.314553 CTTCTCTTGCAATTTGGCAGTG 58.685 45.455 0.00 0.00 45.88 3.66
150 151 2.309613 TCTCTTGCAATTTGGCAGTGT 58.690 42.857 0.00 0.00 45.88 3.55
151 152 3.485394 TCTCTTGCAATTTGGCAGTGTA 58.515 40.909 0.00 0.00 45.88 2.90
152 153 3.888323 TCTCTTGCAATTTGGCAGTGTAA 59.112 39.130 0.00 0.00 45.88 2.41
153 154 3.976169 TCTTGCAATTTGGCAGTGTAAC 58.024 40.909 0.00 0.00 45.88 2.50
169 170 4.568072 TGTAACTGCTACACAATGGGAT 57.432 40.909 0.00 0.00 35.50 3.85
170 171 5.685520 TGTAACTGCTACACAATGGGATA 57.314 39.130 0.00 0.00 35.50 2.59
171 172 6.056090 TGTAACTGCTACACAATGGGATAA 57.944 37.500 0.00 0.00 35.50 1.75
172 173 6.658849 TGTAACTGCTACACAATGGGATAAT 58.341 36.000 0.00 0.00 35.50 1.28
173 174 6.542005 TGTAACTGCTACACAATGGGATAATG 59.458 38.462 0.00 0.00 35.50 1.90
174 175 5.116084 ACTGCTACACAATGGGATAATGT 57.884 39.130 0.00 0.00 0.00 2.71
175 176 5.509498 ACTGCTACACAATGGGATAATGTT 58.491 37.500 0.00 0.00 0.00 2.71
176 177 5.357878 ACTGCTACACAATGGGATAATGTTG 59.642 40.000 0.00 0.00 0.00 3.33
177 178 4.097741 TGCTACACAATGGGATAATGTTGC 59.902 41.667 0.00 0.00 40.77 4.17
178 179 3.781079 ACACAATGGGATAATGTTGCG 57.219 42.857 0.00 0.00 0.00 4.85
179 180 2.426738 ACACAATGGGATAATGTTGCGG 59.573 45.455 0.00 0.00 0.00 5.69
180 181 2.426738 CACAATGGGATAATGTTGCGGT 59.573 45.455 0.00 0.00 0.00 5.68
181 182 3.096092 ACAATGGGATAATGTTGCGGTT 58.904 40.909 0.00 0.00 0.00 4.44
182 183 3.119173 ACAATGGGATAATGTTGCGGTTG 60.119 43.478 0.00 0.00 0.00 3.77
183 184 2.498644 TGGGATAATGTTGCGGTTGA 57.501 45.000 0.00 0.00 0.00 3.18
184 185 2.364632 TGGGATAATGTTGCGGTTGAG 58.635 47.619 0.00 0.00 0.00 3.02
185 186 2.026729 TGGGATAATGTTGCGGTTGAGA 60.027 45.455 0.00 0.00 0.00 3.27
186 187 3.214328 GGGATAATGTTGCGGTTGAGAT 58.786 45.455 0.00 0.00 0.00 2.75
187 188 3.003689 GGGATAATGTTGCGGTTGAGATG 59.996 47.826 0.00 0.00 0.00 2.90
188 189 3.548818 GGATAATGTTGCGGTTGAGATGC 60.549 47.826 0.00 0.00 0.00 3.91
189 190 0.527565 AATGTTGCGGTTGAGATGCC 59.472 50.000 0.00 0.00 0.00 4.40
190 191 0.322816 ATGTTGCGGTTGAGATGCCT 60.323 50.000 0.00 0.00 0.00 4.75
191 192 0.537143 TGTTGCGGTTGAGATGCCTT 60.537 50.000 0.00 0.00 0.00 4.35
192 193 0.169009 GTTGCGGTTGAGATGCCTTC 59.831 55.000 0.00 0.00 0.00 3.46
193 194 0.960364 TTGCGGTTGAGATGCCTTCC 60.960 55.000 0.00 0.00 0.00 3.46
194 195 1.377202 GCGGTTGAGATGCCTTCCA 60.377 57.895 0.00 0.00 0.00 3.53
195 196 0.960364 GCGGTTGAGATGCCTTCCAA 60.960 55.000 0.00 0.00 0.00 3.53
196 197 0.804989 CGGTTGAGATGCCTTCCAAC 59.195 55.000 0.00 0.00 36.02 3.77
197 198 1.881925 CGGTTGAGATGCCTTCCAACA 60.882 52.381 0.00 0.00 37.30 3.33
198 199 2.238521 GGTTGAGATGCCTTCCAACAA 58.761 47.619 0.00 0.00 37.30 2.83
199 200 2.627699 GGTTGAGATGCCTTCCAACAAA 59.372 45.455 0.00 0.00 37.30 2.83
200 201 3.069443 GGTTGAGATGCCTTCCAACAAAA 59.931 43.478 0.00 0.00 37.30 2.44
201 202 4.051237 GTTGAGATGCCTTCCAACAAAAC 58.949 43.478 0.00 0.00 36.41 2.43
202 203 3.295093 TGAGATGCCTTCCAACAAAACA 58.705 40.909 0.00 0.00 0.00 2.83
203 204 3.703556 TGAGATGCCTTCCAACAAAACAA 59.296 39.130 0.00 0.00 0.00 2.83
204 205 4.161189 TGAGATGCCTTCCAACAAAACAAA 59.839 37.500 0.00 0.00 0.00 2.83
205 206 5.096443 AGATGCCTTCCAACAAAACAAAA 57.904 34.783 0.00 0.00 0.00 2.44
206 207 4.875536 AGATGCCTTCCAACAAAACAAAAC 59.124 37.500 0.00 0.00 0.00 2.43
207 208 2.996621 TGCCTTCCAACAAAACAAAACG 59.003 40.909 0.00 0.00 0.00 3.60
208 209 2.222931 GCCTTCCAACAAAACAAAACGC 60.223 45.455 0.00 0.00 0.00 4.84
209 210 3.258228 CCTTCCAACAAAACAAAACGCT 58.742 40.909 0.00 0.00 0.00 5.07
210 211 3.682377 CCTTCCAACAAAACAAAACGCTT 59.318 39.130 0.00 0.00 0.00 4.68
211 212 4.865365 CCTTCCAACAAAACAAAACGCTTA 59.135 37.500 0.00 0.00 0.00 3.09
212 213 5.220322 CCTTCCAACAAAACAAAACGCTTAC 60.220 40.000 0.00 0.00 0.00 2.34
213 214 5.061920 TCCAACAAAACAAAACGCTTACT 57.938 34.783 0.00 0.00 0.00 2.24
214 215 5.471257 TCCAACAAAACAAAACGCTTACTT 58.529 33.333 0.00 0.00 0.00 2.24
215 216 5.573669 TCCAACAAAACAAAACGCTTACTTC 59.426 36.000 0.00 0.00 0.00 3.01
216 217 5.575218 CCAACAAAACAAAACGCTTACTTCT 59.425 36.000 0.00 0.00 0.00 2.85
217 218 6.748198 CCAACAAAACAAAACGCTTACTTCTA 59.252 34.615 0.00 0.00 0.00 2.10
218 219 7.044314 CCAACAAAACAAAACGCTTACTTCTAG 60.044 37.037 0.00 0.00 0.00 2.43
219 220 7.311364 ACAAAACAAAACGCTTACTTCTAGA 57.689 32.000 0.00 0.00 0.00 2.43
220 221 7.407337 ACAAAACAAAACGCTTACTTCTAGAG 58.593 34.615 0.00 0.00 0.00 2.43
221 222 7.065443 ACAAAACAAAACGCTTACTTCTAGAGT 59.935 33.333 0.00 0.00 42.55 3.24
222 223 8.545420 CAAAACAAAACGCTTACTTCTAGAGTA 58.455 33.333 0.00 0.00 39.86 2.59
223 224 7.634809 AACAAAACGCTTACTTCTAGAGTAC 57.365 36.000 0.00 0.00 40.51 2.73
224 225 6.742109 ACAAAACGCTTACTTCTAGAGTACA 58.258 36.000 0.00 0.00 40.51 2.90
225 226 6.862090 ACAAAACGCTTACTTCTAGAGTACAG 59.138 38.462 0.00 0.00 40.51 2.74
226 227 6.572167 AAACGCTTACTTCTAGAGTACAGT 57.428 37.500 0.00 0.71 40.51 3.55
227 228 7.678947 AAACGCTTACTTCTAGAGTACAGTA 57.321 36.000 0.00 0.00 40.51 2.74
228 229 6.660887 ACGCTTACTTCTAGAGTACAGTAC 57.339 41.667 2.05 2.05 40.51 2.73
229 230 5.290643 ACGCTTACTTCTAGAGTACAGTACG 59.709 44.000 5.02 6.28 40.51 3.67
230 231 5.276773 CGCTTACTTCTAGAGTACAGTACGG 60.277 48.000 5.02 0.00 40.51 4.02
231 232 5.503846 GCTTACTTCTAGAGTACAGTACGGC 60.504 48.000 5.02 6.26 40.51 5.68
232 233 2.935201 ACTTCTAGAGTACAGTACGGCG 59.065 50.000 4.80 4.80 36.65 6.46
233 234 1.293924 TCTAGAGTACAGTACGGCGC 58.706 55.000 6.90 0.00 0.00 6.53
234 235 0.042361 CTAGAGTACAGTACGGCGCG 60.042 60.000 6.90 0.00 0.00 6.86
235 236 1.431488 TAGAGTACAGTACGGCGCGG 61.431 60.000 14.03 14.03 0.00 6.46
236 237 4.487412 AGTACAGTACGGCGCGGC 62.487 66.667 24.49 24.49 0.00 6.53
237 238 4.781959 GTACAGTACGGCGCGGCA 62.782 66.667 32.60 11.54 0.00 5.69
238 239 4.053526 TACAGTACGGCGCGGCAA 62.054 61.111 32.60 17.19 0.00 4.52
239 240 3.570621 TACAGTACGGCGCGGCAAA 62.571 57.895 32.60 16.78 0.00 3.68
240 241 4.147322 CAGTACGGCGCGGCAAAG 62.147 66.667 32.60 18.62 0.00 2.77
249 250 4.160635 GCGGCAAAGCGCGTGTAT 62.161 61.111 8.43 0.00 43.84 2.29
250 251 2.276617 CGGCAAAGCGCGTGTATG 60.277 61.111 8.43 3.35 43.84 2.39
251 252 2.576847 GGCAAAGCGCGTGTATGC 60.577 61.111 8.43 13.48 43.84 3.14
263 264 2.858344 GCGTGTATGCGTCTAGTTCAAT 59.142 45.455 0.00 0.00 0.00 2.57
270 271 7.274904 GTGTATGCGTCTAGTTCAATGACTAAA 59.725 37.037 0.00 0.00 32.10 1.85
321 322 5.471257 ACAAAACAAGTTTAACAAGCCGAA 58.529 33.333 0.00 0.00 31.63 4.30
353 354 6.761714 AGTTACTCGTTTAGCCCATTAATCAG 59.238 38.462 0.00 0.00 0.00 2.90
397 399 6.988580 TCAATATTGTTGTTGATTGTTGCCAA 59.011 30.769 14.97 0.00 29.14 4.52
479 482 1.134901 CTCGCGAGCTACACGAGTT 59.865 57.895 25.07 0.00 46.19 3.01
522 696 9.677567 TGAGCTCTTTATGTTAACAAATCAAAC 57.322 29.630 16.19 1.12 0.00 2.93
523 1622 9.129209 GAGCTCTTTATGTTAACAAATCAAACC 57.871 33.333 13.23 0.00 0.00 3.27
623 1723 4.167597 TTCAAAGCCGTGAACCCC 57.832 55.556 0.00 0.00 32.56 4.95
624 1724 1.227664 TTCAAAGCCGTGAACCCCA 59.772 52.632 0.00 0.00 32.56 4.96
647 1747 1.103398 CCTCCGATTTGCATCACCCC 61.103 60.000 0.00 0.00 0.00 4.95
676 1804 5.634859 ACAAATCGAGCAAAATGAATTCACC 59.365 36.000 11.07 0.00 0.00 4.02
700 1828 2.484264 GCATGGACGTGTAAAGCTCTTT 59.516 45.455 0.00 0.27 36.63 2.52
735 1865 2.417787 GGCCCTTTGAGAAATGCACATC 60.418 50.000 0.00 0.00 0.00 3.06
743 1873 2.827921 GAGAAATGCACATCTTGGGGTT 59.172 45.455 4.70 0.00 0.00 4.11
763 1893 7.942341 TGGGGTTATATGTGGAAAAGATGTATC 59.058 37.037 0.00 0.00 0.00 2.24
787 1917 0.969149 GGGGGTGGAAGCAGAAAAAG 59.031 55.000 0.00 0.00 34.77 2.27
788 1918 1.480498 GGGGGTGGAAGCAGAAAAAGA 60.480 52.381 0.00 0.00 34.77 2.52
789 1919 2.316108 GGGGTGGAAGCAGAAAAAGAA 58.684 47.619 0.00 0.00 34.77 2.52
790 1920 2.899900 GGGGTGGAAGCAGAAAAAGAAT 59.100 45.455 0.00 0.00 34.77 2.40
799 1929 6.183360 GGAAGCAGAAAAAGAATACCCAGATC 60.183 42.308 0.00 0.00 0.00 2.75
854 1985 2.009208 AAACCCTAAACGCCCACCCA 62.009 55.000 0.00 0.00 0.00 4.51
880 2011 4.896482 GCTATATATTCCCCATCGTCTCCT 59.104 45.833 0.00 0.00 0.00 3.69
956 2090 1.899534 GATCTCCCGACCTCTCCCG 60.900 68.421 0.00 0.00 0.00 5.14
1050 2184 2.550208 CCTTCATCCTAATGCGGTACCC 60.550 54.545 6.25 0.00 32.58 3.69
1085 2219 0.106167 CTGGTCTATCGGTCCTGGGA 60.106 60.000 0.00 0.00 0.00 4.37
1094 2228 0.461961 CGGTCCTGGGAAGAGATGTC 59.538 60.000 0.00 0.00 0.00 3.06
1122 2257 1.679898 CTTCCCCGGTTCTTGCTCT 59.320 57.895 0.00 0.00 0.00 4.09
1126 2261 0.745845 CCCCGGTTCTTGCTCTGATG 60.746 60.000 0.00 0.00 0.00 3.07
1130 2265 1.462283 CGGTTCTTGCTCTGATGTGTG 59.538 52.381 0.00 0.00 0.00 3.82
1142 2277 2.418976 CTGATGTGTGGATGCTCTTGTG 59.581 50.000 0.00 0.00 0.00 3.33
1143 2278 1.131883 GATGTGTGGATGCTCTTGTGC 59.868 52.381 0.00 0.00 0.00 4.57
1147 2282 2.036571 TGGATGCTCTTGTGCTGCG 61.037 57.895 0.00 0.00 0.00 5.18
1163 2298 2.412065 GCTGCGTTCTTGTTCTAGCAAG 60.412 50.000 4.25 4.25 45.18 4.01
1211 2346 4.455606 GCTGATTTGTGCTAGGGTTAGAT 58.544 43.478 0.00 0.00 0.00 1.98
1214 2349 6.252599 TGATTTGTGCTAGGGTTAGATGAT 57.747 37.500 0.00 0.00 0.00 2.45
1220 2355 4.042187 GTGCTAGGGTTAGATGATGGGATT 59.958 45.833 0.00 0.00 0.00 3.01
1223 2358 5.248477 GCTAGGGTTAGATGATGGGATTGTA 59.752 44.000 0.00 0.00 0.00 2.41
1366 2502 0.394352 GATGATTGGGCCGTGGAAGT 60.394 55.000 0.00 0.00 0.00 3.01
1398 2534 5.462398 GGTAGCATACAATACGTCTTCCTTG 59.538 44.000 0.00 0.00 45.43 3.61
1430 2566 0.031178 CTGGTGCAGTTTGCCTGTTC 59.969 55.000 0.00 0.00 44.23 3.18
1438 2574 3.813166 GCAGTTTGCCTGTTCTTAGTGTA 59.187 43.478 0.00 0.00 43.55 2.90
1445 2581 3.734293 GCCTGTTCTTAGTGTAGGTAGCG 60.734 52.174 0.00 0.00 0.00 4.26
1452 2588 4.815308 TCTTAGTGTAGGTAGCGAGATGAC 59.185 45.833 0.00 0.00 0.00 3.06
1469 2605 3.226346 TGACATCTACCTCGGTTTTCG 57.774 47.619 0.00 0.00 40.90 3.46
1479 2615 2.416836 CCTCGGTTTTCGTGATGCTCTA 60.417 50.000 0.00 0.00 40.32 2.43
1481 2617 3.186909 TCGGTTTTCGTGATGCTCTATG 58.813 45.455 0.00 0.00 40.32 2.23
1486 2622 2.871182 TCGTGATGCTCTATGGTGTC 57.129 50.000 0.00 0.00 0.00 3.67
1487 2623 2.379005 TCGTGATGCTCTATGGTGTCT 58.621 47.619 0.00 0.00 0.00 3.41
1488 2624 2.099756 TCGTGATGCTCTATGGTGTCTG 59.900 50.000 0.00 0.00 0.00 3.51
1489 2625 2.159184 CGTGATGCTCTATGGTGTCTGT 60.159 50.000 0.00 0.00 0.00 3.41
1490 2626 3.193263 GTGATGCTCTATGGTGTCTGTG 58.807 50.000 0.00 0.00 0.00 3.66
1496 2645 2.828520 CTCTATGGTGTCTGTGTCCACT 59.171 50.000 0.00 0.00 33.91 4.00
1505 2654 1.490490 TCTGTGTCCACTTCCTTGCTT 59.510 47.619 0.00 0.00 0.00 3.91
1512 2661 4.072131 GTCCACTTCCTTGCTTGTTATGA 58.928 43.478 0.00 0.00 0.00 2.15
1516 2665 4.860907 CACTTCCTTGCTTGTTATGATTGC 59.139 41.667 0.00 0.00 0.00 3.56
1521 2670 5.007626 TCCTTGCTTGTTATGATTGCGATAC 59.992 40.000 0.00 0.00 0.00 2.24
1571 2728 4.002982 TCGAGATGAAATGGTTGGAACAG 58.997 43.478 0.00 0.00 42.39 3.16
1583 2740 8.677148 AATGGTTGGAACAGATGTATATGTAC 57.323 34.615 0.00 0.00 42.39 2.90
1584 2741 7.189079 TGGTTGGAACAGATGTATATGTACA 57.811 36.000 4.66 4.66 42.17 2.90
1598 2755 7.951591 TGTATATGTACACAGTATGCATCAGT 58.048 34.615 0.19 0.00 42.53 3.41
1601 2758 5.405935 TGTACACAGTATGCATCAGTTCT 57.594 39.130 0.19 0.00 42.53 3.01
1630 2787 5.645497 AGTGACATGCTCTTTATTTCAGGAC 59.355 40.000 0.00 0.00 0.00 3.85
1632 2789 6.818644 GTGACATGCTCTTTATTTCAGGACTA 59.181 38.462 0.00 0.00 0.00 2.59
1638 2795 6.595716 TGCTCTTTATTTCAGGACTAGCTTTC 59.404 38.462 0.00 0.00 0.00 2.62
1641 2798 2.762535 TTTCAGGACTAGCTTTCGGG 57.237 50.000 0.00 0.00 0.00 5.14
1642 2799 1.640917 TTCAGGACTAGCTTTCGGGT 58.359 50.000 0.00 0.00 0.00 5.28
1643 2800 0.895530 TCAGGACTAGCTTTCGGGTG 59.104 55.000 0.00 0.00 0.00 4.61
1650 2807 2.288640 ACTAGCTTTCGGGTGTGTACAC 60.289 50.000 19.36 19.36 45.72 2.90
1667 2824 4.513692 TGTACACATCTGTAGTTTGTTGCC 59.486 41.667 0.00 0.00 33.31 4.52
1669 2826 3.315191 ACACATCTGTAGTTTGTTGCCAC 59.685 43.478 0.00 0.00 0.00 5.01
1670 2827 3.314913 CACATCTGTAGTTTGTTGCCACA 59.685 43.478 0.00 0.00 0.00 4.17
1671 2828 4.022935 CACATCTGTAGTTTGTTGCCACAT 60.023 41.667 0.00 0.00 31.06 3.21
1675 2832 4.155826 TCTGTAGTTTGTTGCCACATATGC 59.844 41.667 1.58 0.00 31.06 3.14
1676 2833 3.823304 TGTAGTTTGTTGCCACATATGCA 59.177 39.130 1.58 0.00 36.84 3.96
1677 2834 3.302365 AGTTTGTTGCCACATATGCAC 57.698 42.857 1.58 0.00 38.72 4.57
1679 2836 3.069300 AGTTTGTTGCCACATATGCACAA 59.931 39.130 1.58 2.12 38.72 3.33
1680 2837 3.300852 TTGTTGCCACATATGCACAAG 57.699 42.857 1.58 0.00 38.72 3.16
1681 2838 2.237643 TGTTGCCACATATGCACAAGT 58.762 42.857 1.58 0.00 38.72 3.16
1682 2839 2.627221 TGTTGCCACATATGCACAAGTT 59.373 40.909 1.58 0.00 38.72 2.66
1683 2840 3.244976 GTTGCCACATATGCACAAGTTC 58.755 45.455 1.58 0.00 38.72 3.01
1684 2841 2.512705 TGCCACATATGCACAAGTTCA 58.487 42.857 1.58 0.00 32.85 3.18
1685 2842 2.488937 TGCCACATATGCACAAGTTCAG 59.511 45.455 1.58 0.00 32.85 3.02
1686 2843 2.489329 GCCACATATGCACAAGTTCAGT 59.511 45.455 1.58 0.00 0.00 3.41
1687 2844 3.057315 GCCACATATGCACAAGTTCAGTT 60.057 43.478 1.58 0.00 0.00 3.16
1688 2845 4.726416 CCACATATGCACAAGTTCAGTTC 58.274 43.478 1.58 0.00 0.00 3.01
1689 2846 4.456911 CCACATATGCACAAGTTCAGTTCT 59.543 41.667 1.58 0.00 0.00 3.01
1690 2847 5.388111 CACATATGCACAAGTTCAGTTCTG 58.612 41.667 1.58 0.00 0.00 3.02
1691 2848 5.049198 CACATATGCACAAGTTCAGTTCTGT 60.049 40.000 1.58 0.00 0.00 3.41
1692 2849 3.976793 ATGCACAAGTTCAGTTCTGTG 57.023 42.857 0.00 0.00 0.00 3.66
1693 2850 2.710377 TGCACAAGTTCAGTTCTGTGT 58.290 42.857 3.30 0.00 0.00 3.72
1694 2851 3.867857 TGCACAAGTTCAGTTCTGTGTA 58.132 40.909 3.30 0.00 0.00 2.90
1695 2852 4.257731 TGCACAAGTTCAGTTCTGTGTAA 58.742 39.130 3.30 0.00 0.00 2.41
1696 2853 4.697828 TGCACAAGTTCAGTTCTGTGTAAA 59.302 37.500 3.30 0.00 0.00 2.01
1697 2854 5.182190 TGCACAAGTTCAGTTCTGTGTAAAA 59.818 36.000 3.30 0.00 0.00 1.52
1698 2855 6.090129 GCACAAGTTCAGTTCTGTGTAAAAA 58.910 36.000 3.30 0.00 0.00 1.94
1722 2879 9.661563 AAAAATATGTCAAGTAGATACGTCCAA 57.338 29.630 0.00 0.00 0.00 3.53
1723 2880 8.873215 AAATATGTCAAGTAGATACGTCCAAG 57.127 34.615 0.00 0.00 0.00 3.61
1724 2881 5.916661 ATGTCAAGTAGATACGTCCAAGT 57.083 39.130 0.00 0.00 0.00 3.16
1725 2882 5.717078 TGTCAAGTAGATACGTCCAAGTT 57.283 39.130 0.00 0.00 0.00 2.66
1726 2883 5.706916 TGTCAAGTAGATACGTCCAAGTTC 58.293 41.667 0.00 0.00 0.00 3.01
1727 2884 5.242171 TGTCAAGTAGATACGTCCAAGTTCA 59.758 40.000 0.00 0.00 0.00 3.18
1728 2885 5.800941 GTCAAGTAGATACGTCCAAGTTCAG 59.199 44.000 0.00 0.00 0.00 3.02
1729 2886 5.475909 TCAAGTAGATACGTCCAAGTTCAGT 59.524 40.000 0.00 0.00 0.00 3.41
1730 2887 5.979288 AGTAGATACGTCCAAGTTCAGTT 57.021 39.130 0.00 0.00 0.00 3.16
1731 2888 5.710984 AGTAGATACGTCCAAGTTCAGTTG 58.289 41.667 0.00 0.00 0.00 3.16
1732 2889 4.866508 AGATACGTCCAAGTTCAGTTGA 57.133 40.909 0.00 0.00 0.00 3.18
1733 2890 5.407407 AGATACGTCCAAGTTCAGTTGAT 57.593 39.130 0.00 0.00 0.00 2.57
1734 2891 6.525578 AGATACGTCCAAGTTCAGTTGATA 57.474 37.500 0.00 0.00 0.00 2.15
1735 2892 7.113658 AGATACGTCCAAGTTCAGTTGATAT 57.886 36.000 0.00 0.00 0.00 1.63
1736 2893 6.980978 AGATACGTCCAAGTTCAGTTGATATG 59.019 38.462 0.00 0.00 0.00 1.78
1737 2894 4.894784 ACGTCCAAGTTCAGTTGATATGT 58.105 39.130 0.00 0.00 0.00 2.29
1738 2895 6.032956 ACGTCCAAGTTCAGTTGATATGTA 57.967 37.500 0.00 0.00 0.00 2.29
1739 2896 6.100004 ACGTCCAAGTTCAGTTGATATGTAG 58.900 40.000 0.00 0.00 0.00 2.74
1740 2897 6.071560 ACGTCCAAGTTCAGTTGATATGTAGA 60.072 38.462 0.00 0.00 0.00 2.59
1741 2898 6.980978 CGTCCAAGTTCAGTTGATATGTAGAT 59.019 38.462 0.00 0.00 0.00 1.98
1742 2899 7.043125 CGTCCAAGTTCAGTTGATATGTAGATG 60.043 40.741 0.00 0.00 0.00 2.90
1743 2900 7.766278 GTCCAAGTTCAGTTGATATGTAGATGT 59.234 37.037 0.00 0.00 0.00 3.06
1744 2901 7.765819 TCCAAGTTCAGTTGATATGTAGATGTG 59.234 37.037 0.00 0.00 0.00 3.21
1785 2942 5.300969 ACATATGCACATGTTCAGTTGAC 57.699 39.130 4.36 0.00 35.60 3.18
1815 2975 3.820467 TGTTCTTGTGCTATGTTCTTGGG 59.180 43.478 0.00 0.00 0.00 4.12
1841 3001 1.826385 AGTGCCAAGTAGAACCATGC 58.174 50.000 0.00 0.00 0.00 4.06
1868 3028 1.607251 GGCTGATTTATACCGGGGTCG 60.607 57.143 6.32 0.00 0.00 4.79
2090 3313 4.376340 AGTTTGGTTTCAGTTTGCTCAG 57.624 40.909 0.00 0.00 0.00 3.35
2091 3314 4.016444 AGTTTGGTTTCAGTTTGCTCAGA 58.984 39.130 0.00 0.00 0.00 3.27
2293 3541 3.317993 GTGTAGTTGGTTGTGCTTCCAAT 59.682 43.478 0.00 0.00 44.03 3.16
2299 3547 5.070313 AGTTGGTTGTGCTTCCAATTACATT 59.930 36.000 0.00 0.00 44.03 2.71
2345 3593 7.912250 GCATCTTGAATAGTTATGTTGTTGGAG 59.088 37.037 0.00 0.00 0.00 3.86
2355 3604 3.502191 TGTTGTTGGAGTTTGCTCAAC 57.498 42.857 0.00 0.00 43.37 3.18
2383 3632 5.194432 TCCTGTTGCTTGTTAAGTTGGTAA 58.806 37.500 0.00 0.00 0.00 2.85
2626 3876 6.849502 AGATGTATGTTGAACAGCAGATTTG 58.150 36.000 3.74 0.00 35.73 2.32
2849 4169 4.080413 TCACCCATTGCTCAGATATGTGAA 60.080 41.667 3.90 0.00 0.00 3.18
2910 4230 1.112113 GGATGCTTCAGGACGAGGTA 58.888 55.000 1.64 0.00 0.00 3.08
3021 4341 3.157881 TCTCGCTCTCTTCAAGGAGAAA 58.842 45.455 6.99 0.00 41.15 2.52
3273 4617 5.065090 TGTGCTATGATTGTCTGTGTTATGC 59.935 40.000 0.00 0.00 0.00 3.14
3276 4620 4.627611 ATGATTGTCTGTGTTATGCTGC 57.372 40.909 0.00 0.00 0.00 5.25
3278 4622 4.831107 TGATTGTCTGTGTTATGCTGCTA 58.169 39.130 0.00 0.00 0.00 3.49
3380 4725 6.964807 TGAAATGTGGATTGGATTGGATAG 57.035 37.500 0.00 0.00 0.00 2.08
3398 4743 7.316393 TGGATAGTTGGGTTAGATTGGATAG 57.684 40.000 0.00 0.00 0.00 2.08
3399 4744 6.849697 TGGATAGTTGGGTTAGATTGGATAGT 59.150 38.462 0.00 0.00 0.00 2.12
3400 4745 7.349859 TGGATAGTTGGGTTAGATTGGATAGTT 59.650 37.037 0.00 0.00 0.00 2.24
3401 4746 7.661847 GGATAGTTGGGTTAGATTGGATAGTTG 59.338 40.741 0.00 0.00 0.00 3.16
3402 4747 5.755849 AGTTGGGTTAGATTGGATAGTTGG 58.244 41.667 0.00 0.00 0.00 3.77
3403 4748 4.788925 TGGGTTAGATTGGATAGTTGGG 57.211 45.455 0.00 0.00 0.00 4.12
3404 4749 4.116113 TGGGTTAGATTGGATAGTTGGGT 58.884 43.478 0.00 0.00 0.00 4.51
3405 4750 4.542525 TGGGTTAGATTGGATAGTTGGGTT 59.457 41.667 0.00 0.00 0.00 4.11
3406 4751 5.732170 TGGGTTAGATTGGATAGTTGGGTTA 59.268 40.000 0.00 0.00 0.00 2.85
3407 4752 6.126594 TGGGTTAGATTGGATAGTTGGGTTAG 60.127 42.308 0.00 0.00 0.00 2.34
3410 4755 8.218488 GGTTAGATTGGATAGTTGGGTTAGATT 58.782 37.037 0.00 0.00 0.00 2.40
3416 4761 5.123936 GGATAGTTGGGTTAGATTGTGGAC 58.876 45.833 0.00 0.00 0.00 4.02
3418 4763 4.021102 AGTTGGGTTAGATTGTGGACTG 57.979 45.455 0.00 0.00 0.00 3.51
3450 4795 5.648092 AGAAGTCGCCTAAATTAGCAATGTT 59.352 36.000 0.00 0.00 0.00 2.71
3457 4802 5.067023 GCCTAAATTAGCAATGTTCTGAGCT 59.933 40.000 0.00 0.00 40.92 4.09
3463 4808 1.404391 GCAATGTTCTGAGCTCCATGG 59.596 52.381 12.15 4.97 0.00 3.66
3464 4809 2.942752 GCAATGTTCTGAGCTCCATGGA 60.943 50.000 15.27 15.27 0.00 3.41
3465 4810 2.943690 CAATGTTCTGAGCTCCATGGAG 59.056 50.000 33.73 33.73 44.56 3.86
3467 4812 1.552337 TGTTCTGAGCTCCATGGAGTC 59.448 52.381 36.32 30.17 43.70 3.36
3471 4816 3.713003 TCTGAGCTCCATGGAGTCTTTA 58.287 45.455 36.32 24.18 43.70 1.85
3472 4817 4.096681 TCTGAGCTCCATGGAGTCTTTAA 58.903 43.478 36.32 22.04 43.70 1.52
3475 4820 5.819991 TGAGCTCCATGGAGTCTTTAAAAT 58.180 37.500 36.32 15.10 43.70 1.82
3478 4823 8.055181 TGAGCTCCATGGAGTCTTTAAAATAAT 58.945 33.333 36.32 13.28 43.70 1.28
3556 4901 6.208988 TCTAACGATGAAGAGCTACACAAT 57.791 37.500 0.00 0.00 0.00 2.71
3557 4902 6.266323 TCTAACGATGAAGAGCTACACAATC 58.734 40.000 0.00 0.00 0.00 2.67
3559 4904 4.428209 ACGATGAAGAGCTACACAATCTG 58.572 43.478 0.00 0.00 0.00 2.90
3561 4906 4.867047 CGATGAAGAGCTACACAATCTGTT 59.133 41.667 0.00 0.00 33.91 3.16
3562 4907 6.036470 CGATGAAGAGCTACACAATCTGTTA 58.964 40.000 0.00 0.00 33.91 2.41
3563 4908 6.531594 CGATGAAGAGCTACACAATCTGTTAA 59.468 38.462 0.00 0.00 33.91 2.01
3574 4920 9.743057 CTACACAATCTGTTAAACCATTTTCAA 57.257 29.630 0.00 0.00 33.91 2.69
3602 4948 6.208007 TCACGATTTTGTCTTCCTAGTGTAGA 59.792 38.462 0.00 0.00 0.00 2.59
3604 4950 7.009631 CACGATTTTGTCTTCCTAGTGTAGATG 59.990 40.741 0.00 0.00 0.00 2.90
3679 5031 4.385244 ACGCGTGTGATCTTTTTAGAAC 57.615 40.909 12.93 0.00 0.00 3.01
3767 5134 9.865321 TTAGCATTTTCATCCCTATATACGTAC 57.135 33.333 0.00 0.00 0.00 3.67
3796 5163 4.459685 AGTTGTACTAGCGAGATGTGTTCT 59.540 41.667 0.00 0.00 37.41 3.01
3797 5164 4.357018 TGTACTAGCGAGATGTGTTCTG 57.643 45.455 0.00 0.00 33.74 3.02
3800 5167 3.839293 ACTAGCGAGATGTGTTCTGTTC 58.161 45.455 0.00 0.00 33.74 3.18
3802 5169 1.620819 AGCGAGATGTGTTCTGTTCCT 59.379 47.619 0.00 0.00 33.74 3.36
3803 5170 2.037772 AGCGAGATGTGTTCTGTTCCTT 59.962 45.455 0.00 0.00 33.74 3.36
3804 5171 2.158449 GCGAGATGTGTTCTGTTCCTTG 59.842 50.000 0.00 0.00 33.74 3.61
3805 5172 3.393800 CGAGATGTGTTCTGTTCCTTGT 58.606 45.455 0.00 0.00 33.74 3.16
3806 5173 3.185188 CGAGATGTGTTCTGTTCCTTGTG 59.815 47.826 0.00 0.00 33.74 3.33
3842 5209 6.428465 TGTCGCTATTGAGTTTTGTTTCCATA 59.572 34.615 0.00 0.00 0.00 2.74
3872 5239 7.787904 TGGATAGCAAGTTTTATCTACCCTCTA 59.212 37.037 0.00 0.00 0.00 2.43
3874 5241 5.903810 AGCAAGTTTTATCTACCCTCTACG 58.096 41.667 0.00 0.00 0.00 3.51
3884 5251 0.461961 ACCCTCTACGATGCTTCTGC 59.538 55.000 0.00 0.00 40.20 4.26
3951 5319 5.963586 GCAGTTTTGCCGATTGTATAGTAAC 59.036 40.000 0.00 0.00 44.74 2.50
3960 5328 6.679638 GCCGATTGTATAGTAACTCACACTGA 60.680 42.308 0.00 0.00 0.00 3.41
3963 5331 9.135843 CGATTGTATAGTAACTCACACTGAAAA 57.864 33.333 0.00 0.00 0.00 2.29
3999 5367 9.846248 AATAACAGCTGATTATGTTTTTCACTC 57.154 29.630 23.35 0.00 40.09 3.51
4000 5368 6.882610 ACAGCTGATTATGTTTTTCACTCA 57.117 33.333 23.35 0.00 0.00 3.41
4001 5369 6.672147 ACAGCTGATTATGTTTTTCACTCAC 58.328 36.000 23.35 0.00 0.00 3.51
4002 5370 6.488006 ACAGCTGATTATGTTTTTCACTCACT 59.512 34.615 23.35 0.00 0.00 3.41
4030 5398 4.777896 ACTCTGCACAACCTAAGAGGATAA 59.222 41.667 0.00 0.00 40.41 1.75
4033 5401 5.127845 TCTGCACAACCTAAGAGGATAAGAG 59.872 44.000 0.00 0.00 37.67 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.320935 GGTAGCGCCAAGATTTCAGAAAAA 60.321 41.667 2.29 0.00 37.17 1.94
10 11 3.190535 GGTAGCGCCAAGATTTCAGAAAA 59.809 43.478 2.29 0.00 37.17 2.29
11 12 2.747446 GGTAGCGCCAAGATTTCAGAAA 59.253 45.455 2.29 0.00 37.17 2.52
12 13 2.356135 GGTAGCGCCAAGATTTCAGAA 58.644 47.619 2.29 0.00 37.17 3.02
13 14 1.739035 CGGTAGCGCCAAGATTTCAGA 60.739 52.381 2.29 0.00 36.97 3.27
14 15 0.652592 CGGTAGCGCCAAGATTTCAG 59.347 55.000 2.29 0.00 36.97 3.02
15 16 0.248012 TCGGTAGCGCCAAGATTTCA 59.752 50.000 9.99 0.00 36.97 2.69
16 17 1.365699 TTCGGTAGCGCCAAGATTTC 58.634 50.000 9.99 0.00 36.97 2.17
17 18 1.816074 TTTCGGTAGCGCCAAGATTT 58.184 45.000 9.99 0.00 36.97 2.17
18 19 1.940613 GATTTCGGTAGCGCCAAGATT 59.059 47.619 9.99 0.00 36.97 2.40
19 20 1.583054 GATTTCGGTAGCGCCAAGAT 58.417 50.000 9.99 0.00 36.97 2.40
20 21 0.804544 CGATTTCGGTAGCGCCAAGA 60.805 55.000 9.99 0.00 36.97 3.02
21 22 1.636340 CGATTTCGGTAGCGCCAAG 59.364 57.895 9.99 0.00 36.97 3.61
22 23 3.788817 CGATTTCGGTAGCGCCAA 58.211 55.556 9.99 5.34 36.97 4.52
32 33 0.649475 CTCTGCTTCTGCCGATTTCG 59.351 55.000 0.00 0.00 38.71 3.46
33 34 0.376502 GCTCTGCTTCTGCCGATTTC 59.623 55.000 0.00 0.00 38.71 2.17
34 35 0.321919 TGCTCTGCTTCTGCCGATTT 60.322 50.000 0.00 0.00 38.71 2.17
35 36 0.107312 ATGCTCTGCTTCTGCCGATT 60.107 50.000 0.00 0.00 38.71 3.34
36 37 0.532417 GATGCTCTGCTTCTGCCGAT 60.532 55.000 0.00 0.00 38.71 4.18
37 38 1.153489 GATGCTCTGCTTCTGCCGA 60.153 57.895 0.00 0.00 38.71 5.54
38 39 1.153409 AGATGCTCTGCTTCTGCCG 60.153 57.895 7.08 0.00 40.65 5.69
39 40 4.959399 AGATGCTCTGCTTCTGCC 57.041 55.556 7.08 0.00 40.65 4.85
53 54 5.010516 GCTACATCACCTCATCTACACAGAT 59.989 44.000 0.00 0.00 42.52 2.90
54 55 4.339530 GCTACATCACCTCATCTACACAGA 59.660 45.833 0.00 0.00 34.56 3.41
55 56 4.500545 GGCTACATCACCTCATCTACACAG 60.501 50.000 0.00 0.00 0.00 3.66
56 57 3.384789 GGCTACATCACCTCATCTACACA 59.615 47.826 0.00 0.00 0.00 3.72
57 58 3.384789 TGGCTACATCACCTCATCTACAC 59.615 47.826 0.00 0.00 0.00 2.90
58 59 3.638627 CTGGCTACATCACCTCATCTACA 59.361 47.826 0.00 0.00 0.00 2.74
59 60 3.006323 CCTGGCTACATCACCTCATCTAC 59.994 52.174 0.00 0.00 0.00 2.59
60 61 3.117131 TCCTGGCTACATCACCTCATCTA 60.117 47.826 0.00 0.00 0.00 1.98
61 62 2.045524 CCTGGCTACATCACCTCATCT 58.954 52.381 0.00 0.00 0.00 2.90
62 63 2.036992 CTCCTGGCTACATCACCTCATC 59.963 54.545 0.00 0.00 0.00 2.92
63 64 2.045524 CTCCTGGCTACATCACCTCAT 58.954 52.381 0.00 0.00 0.00 2.90
64 65 1.489481 CTCCTGGCTACATCACCTCA 58.511 55.000 0.00 0.00 0.00 3.86
65 66 0.105778 GCTCCTGGCTACATCACCTC 59.894 60.000 0.00 0.00 38.06 3.85
66 67 1.680522 CGCTCCTGGCTACATCACCT 61.681 60.000 0.00 0.00 39.13 4.00
67 68 1.227380 CGCTCCTGGCTACATCACC 60.227 63.158 0.00 0.00 39.13 4.02
68 69 1.227380 CCGCTCCTGGCTACATCAC 60.227 63.158 0.00 0.00 39.13 3.06
69 70 2.434843 CCCGCTCCTGGCTACATCA 61.435 63.158 0.00 0.00 39.13 3.07
70 71 2.093537 CTCCCGCTCCTGGCTACATC 62.094 65.000 0.00 0.00 39.13 3.06
71 72 2.041922 TCCCGCTCCTGGCTACAT 60.042 61.111 0.00 0.00 39.13 2.29
72 73 2.219449 TACTCCCGCTCCTGGCTACA 62.219 60.000 0.00 0.00 39.13 2.74
73 74 1.455217 TACTCCCGCTCCTGGCTAC 60.455 63.158 0.00 0.00 39.13 3.58
74 75 1.152735 CTACTCCCGCTCCTGGCTA 60.153 63.158 0.00 0.00 39.13 3.93
75 76 2.443016 CTACTCCCGCTCCTGGCT 60.443 66.667 0.00 0.00 39.13 4.75
76 77 3.541713 CCTACTCCCGCTCCTGGC 61.542 72.222 0.00 0.00 37.64 4.85
77 78 2.840102 CCCTACTCCCGCTCCTGG 60.840 72.222 0.00 0.00 0.00 4.45
78 79 2.840102 CCCCTACTCCCGCTCCTG 60.840 72.222 0.00 0.00 0.00 3.86
79 80 4.862823 GCCCCTACTCCCGCTCCT 62.863 72.222 0.00 0.00 0.00 3.69
81 82 3.851128 GTGCCCCTACTCCCGCTC 61.851 72.222 0.00 0.00 0.00 5.03
82 83 4.715130 TGTGCCCCTACTCCCGCT 62.715 66.667 0.00 0.00 0.00 5.52
83 84 3.480133 ATGTGCCCCTACTCCCGC 61.480 66.667 0.00 0.00 0.00 6.13
84 85 1.910580 AACATGTGCCCCTACTCCCG 61.911 60.000 0.00 0.00 0.00 5.14
85 86 0.394352 CAACATGTGCCCCTACTCCC 60.394 60.000 0.00 0.00 0.00 4.30
86 87 0.618458 TCAACATGTGCCCCTACTCC 59.382 55.000 0.00 0.00 0.00 3.85
87 88 2.014068 GCTCAACATGTGCCCCTACTC 61.014 57.143 0.00 0.00 31.28 2.59
88 89 0.035056 GCTCAACATGTGCCCCTACT 60.035 55.000 0.00 0.00 31.28 2.57
89 90 2.482326 GCTCAACATGTGCCCCTAC 58.518 57.895 0.00 0.00 31.28 3.18
95 96 0.310543 TTTGTCGGCTCAACATGTGC 59.689 50.000 0.00 0.00 36.25 4.57
96 97 2.587956 CATTTGTCGGCTCAACATGTG 58.412 47.619 0.00 0.00 0.00 3.21
97 98 1.068333 GCATTTGTCGGCTCAACATGT 60.068 47.619 0.00 0.00 0.00 3.21
98 99 1.200716 AGCATTTGTCGGCTCAACATG 59.799 47.619 0.00 0.00 34.76 3.21
99 100 1.538047 AGCATTTGTCGGCTCAACAT 58.462 45.000 0.00 0.00 34.76 2.71
100 101 1.001487 CAAGCATTTGTCGGCTCAACA 60.001 47.619 0.00 0.00 40.01 3.33
101 102 1.666888 CCAAGCATTTGTCGGCTCAAC 60.667 52.381 0.00 0.00 40.01 3.18
102 103 0.597568 CCAAGCATTTGTCGGCTCAA 59.402 50.000 0.00 0.00 40.01 3.02
103 104 0.250684 TCCAAGCATTTGTCGGCTCA 60.251 50.000 0.00 0.00 40.01 4.26
104 105 0.169009 GTCCAAGCATTTGTCGGCTC 59.831 55.000 0.00 0.00 40.01 4.70
105 106 0.250901 AGTCCAAGCATTTGTCGGCT 60.251 50.000 0.00 0.00 43.46 5.52
106 107 0.169009 GAGTCCAAGCATTTGTCGGC 59.831 55.000 0.00 0.00 32.21 5.54
107 108 1.197721 GTGAGTCCAAGCATTTGTCGG 59.802 52.381 0.00 0.00 32.21 4.79
108 109 1.197721 GGTGAGTCCAAGCATTTGTCG 59.802 52.381 0.00 0.00 35.97 4.35
109 110 2.508526 AGGTGAGTCCAAGCATTTGTC 58.491 47.619 0.00 0.00 39.02 3.18
110 111 2.664402 AGGTGAGTCCAAGCATTTGT 57.336 45.000 0.00 0.00 39.02 2.83
111 112 3.152341 AGAAGGTGAGTCCAAGCATTTG 58.848 45.455 0.00 0.00 39.02 2.32
112 113 3.073650 AGAGAAGGTGAGTCCAAGCATTT 59.926 43.478 0.00 0.00 39.02 2.32
113 114 2.641815 AGAGAAGGTGAGTCCAAGCATT 59.358 45.455 0.00 0.00 39.02 3.56
114 115 2.264455 AGAGAAGGTGAGTCCAAGCAT 58.736 47.619 0.00 0.00 39.02 3.79
115 116 1.722034 AGAGAAGGTGAGTCCAAGCA 58.278 50.000 0.00 0.00 39.02 3.91
116 117 2.421619 CAAGAGAAGGTGAGTCCAAGC 58.578 52.381 0.00 0.00 39.02 4.01
117 118 2.224378 TGCAAGAGAAGGTGAGTCCAAG 60.224 50.000 0.00 0.00 39.02 3.61
118 119 1.768275 TGCAAGAGAAGGTGAGTCCAA 59.232 47.619 0.00 0.00 39.02 3.53
119 120 1.423584 TGCAAGAGAAGGTGAGTCCA 58.576 50.000 0.00 0.00 39.02 4.02
120 121 2.550830 TTGCAAGAGAAGGTGAGTCC 57.449 50.000 0.00 0.00 0.00 3.85
121 122 4.320788 CCAAATTGCAAGAGAAGGTGAGTC 60.321 45.833 4.94 0.00 0.00 3.36
122 123 3.571401 CCAAATTGCAAGAGAAGGTGAGT 59.429 43.478 4.94 0.00 0.00 3.41
123 124 3.613432 GCCAAATTGCAAGAGAAGGTGAG 60.613 47.826 4.94 0.00 0.00 3.51
124 125 2.297033 GCCAAATTGCAAGAGAAGGTGA 59.703 45.455 4.94 0.00 0.00 4.02
125 126 2.036217 TGCCAAATTGCAAGAGAAGGTG 59.964 45.455 4.94 0.00 38.56 4.00
126 127 2.298163 CTGCCAAATTGCAAGAGAAGGT 59.702 45.455 4.94 0.00 41.51 3.50
127 128 2.298163 ACTGCCAAATTGCAAGAGAAGG 59.702 45.455 4.94 3.64 41.51 3.46
128 129 3.243636 ACACTGCCAAATTGCAAGAGAAG 60.244 43.478 4.94 0.00 41.51 2.85
129 130 2.694628 ACACTGCCAAATTGCAAGAGAA 59.305 40.909 4.94 0.00 41.51 2.87
130 131 2.309613 ACACTGCCAAATTGCAAGAGA 58.690 42.857 4.94 0.00 41.51 3.10
131 132 2.806608 ACACTGCCAAATTGCAAGAG 57.193 45.000 4.94 0.00 41.51 2.85
132 133 3.636300 AGTTACACTGCCAAATTGCAAGA 59.364 39.130 4.94 0.00 41.51 3.02
133 134 3.737266 CAGTTACACTGCCAAATTGCAAG 59.263 43.478 4.94 0.00 39.62 4.01
134 135 3.715495 CAGTTACACTGCCAAATTGCAA 58.285 40.909 0.00 0.00 39.62 4.08
135 136 3.367992 CAGTTACACTGCCAAATTGCA 57.632 42.857 0.00 0.00 39.62 4.08
148 149 4.568072 ATCCCATTGTGTAGCAGTTACA 57.432 40.909 0.00 0.00 39.93 2.41
149 150 6.542370 ACATTATCCCATTGTGTAGCAGTTAC 59.458 38.462 0.00 0.00 0.00 2.50
150 151 6.658849 ACATTATCCCATTGTGTAGCAGTTA 58.341 36.000 0.00 0.00 0.00 2.24
151 152 5.509498 ACATTATCCCATTGTGTAGCAGTT 58.491 37.500 0.00 0.00 0.00 3.16
152 153 5.116084 ACATTATCCCATTGTGTAGCAGT 57.884 39.130 0.00 0.00 0.00 4.40
153 154 5.734220 GCAACATTATCCCATTGTGTAGCAG 60.734 44.000 0.00 0.00 0.00 4.24
154 155 4.097741 GCAACATTATCCCATTGTGTAGCA 59.902 41.667 0.00 0.00 0.00 3.49
155 156 4.610945 GCAACATTATCCCATTGTGTAGC 58.389 43.478 0.00 0.00 0.00 3.58
156 157 4.261155 CCGCAACATTATCCCATTGTGTAG 60.261 45.833 0.00 0.00 32.01 2.74
157 158 3.629855 CCGCAACATTATCCCATTGTGTA 59.370 43.478 0.00 0.00 32.01 2.90
158 159 2.426738 CCGCAACATTATCCCATTGTGT 59.573 45.455 0.00 0.00 32.01 3.72
159 160 2.426738 ACCGCAACATTATCCCATTGTG 59.573 45.455 0.00 0.00 33.37 3.33
160 161 2.733956 ACCGCAACATTATCCCATTGT 58.266 42.857 0.00 0.00 0.00 2.71
161 162 3.130164 TCAACCGCAACATTATCCCATTG 59.870 43.478 0.00 0.00 0.00 2.82
162 163 3.360867 TCAACCGCAACATTATCCCATT 58.639 40.909 0.00 0.00 0.00 3.16
163 164 2.951642 CTCAACCGCAACATTATCCCAT 59.048 45.455 0.00 0.00 0.00 4.00
164 165 2.026729 TCTCAACCGCAACATTATCCCA 60.027 45.455 0.00 0.00 0.00 4.37
165 166 2.639065 TCTCAACCGCAACATTATCCC 58.361 47.619 0.00 0.00 0.00 3.85
166 167 3.548818 GCATCTCAACCGCAACATTATCC 60.549 47.826 0.00 0.00 0.00 2.59
167 168 3.548818 GGCATCTCAACCGCAACATTATC 60.549 47.826 0.00 0.00 0.00 1.75
168 169 2.358898 GGCATCTCAACCGCAACATTAT 59.641 45.455 0.00 0.00 0.00 1.28
169 170 1.742831 GGCATCTCAACCGCAACATTA 59.257 47.619 0.00 0.00 0.00 1.90
170 171 0.527565 GGCATCTCAACCGCAACATT 59.472 50.000 0.00 0.00 0.00 2.71
171 172 0.322816 AGGCATCTCAACCGCAACAT 60.323 50.000 0.00 0.00 0.00 2.71
172 173 0.537143 AAGGCATCTCAACCGCAACA 60.537 50.000 0.00 0.00 0.00 3.33
173 174 0.169009 GAAGGCATCTCAACCGCAAC 59.831 55.000 0.00 0.00 0.00 4.17
174 175 0.960364 GGAAGGCATCTCAACCGCAA 60.960 55.000 0.00 0.00 0.00 4.85
175 176 1.377202 GGAAGGCATCTCAACCGCA 60.377 57.895 0.00 0.00 0.00 5.69
176 177 0.960364 TTGGAAGGCATCTCAACCGC 60.960 55.000 0.00 0.00 0.00 5.68
177 178 0.804989 GTTGGAAGGCATCTCAACCG 59.195 55.000 10.84 0.00 35.19 4.44
178 179 1.909700 TGTTGGAAGGCATCTCAACC 58.090 50.000 16.08 0.00 37.91 3.77
179 180 4.051237 GTTTTGTTGGAAGGCATCTCAAC 58.949 43.478 13.52 13.52 38.57 3.18
180 181 3.703556 TGTTTTGTTGGAAGGCATCTCAA 59.296 39.130 0.00 0.00 0.00 3.02
181 182 3.295093 TGTTTTGTTGGAAGGCATCTCA 58.705 40.909 0.00 0.00 0.00 3.27
182 183 4.320608 TTGTTTTGTTGGAAGGCATCTC 57.679 40.909 0.00 0.00 0.00 2.75
183 184 4.751767 TTTGTTTTGTTGGAAGGCATCT 57.248 36.364 0.00 0.00 0.00 2.90
184 185 4.260172 CGTTTTGTTTTGTTGGAAGGCATC 60.260 41.667 0.00 0.00 0.00 3.91
185 186 3.620821 CGTTTTGTTTTGTTGGAAGGCAT 59.379 39.130 0.00 0.00 0.00 4.40
186 187 2.996621 CGTTTTGTTTTGTTGGAAGGCA 59.003 40.909 0.00 0.00 0.00 4.75
187 188 2.222931 GCGTTTTGTTTTGTTGGAAGGC 60.223 45.455 0.00 0.00 0.00 4.35
188 189 3.258228 AGCGTTTTGTTTTGTTGGAAGG 58.742 40.909 0.00 0.00 0.00 3.46
189 190 4.919677 AAGCGTTTTGTTTTGTTGGAAG 57.080 36.364 0.00 0.00 0.00 3.46
190 191 5.471257 AGTAAGCGTTTTGTTTTGTTGGAA 58.529 33.333 0.00 0.00 0.00 3.53
191 192 5.061920 AGTAAGCGTTTTGTTTTGTTGGA 57.938 34.783 0.00 0.00 0.00 3.53
192 193 5.575218 AGAAGTAAGCGTTTTGTTTTGTTGG 59.425 36.000 0.00 0.00 0.00 3.77
193 194 6.626199 AGAAGTAAGCGTTTTGTTTTGTTG 57.374 33.333 0.00 0.00 0.00 3.33
194 195 7.754625 TCTAGAAGTAAGCGTTTTGTTTTGTT 58.245 30.769 0.00 0.00 0.00 2.83
195 196 7.065443 ACTCTAGAAGTAAGCGTTTTGTTTTGT 59.935 33.333 0.00 0.00 36.07 2.83
196 197 7.407337 ACTCTAGAAGTAAGCGTTTTGTTTTG 58.593 34.615 0.00 0.00 36.07 2.44
197 198 7.549615 ACTCTAGAAGTAAGCGTTTTGTTTT 57.450 32.000 0.00 0.00 36.07 2.43
198 199 7.707893 TGTACTCTAGAAGTAAGCGTTTTGTTT 59.292 33.333 0.00 0.00 42.11 2.83
199 200 7.205297 TGTACTCTAGAAGTAAGCGTTTTGTT 58.795 34.615 0.00 0.00 42.11 2.83
200 201 6.742109 TGTACTCTAGAAGTAAGCGTTTTGT 58.258 36.000 0.00 0.00 42.11 2.83
201 202 6.862090 ACTGTACTCTAGAAGTAAGCGTTTTG 59.138 38.462 0.00 0.00 42.11 2.44
202 203 6.979465 ACTGTACTCTAGAAGTAAGCGTTTT 58.021 36.000 0.00 0.00 42.11 2.43
203 204 6.572167 ACTGTACTCTAGAAGTAAGCGTTT 57.428 37.500 0.00 0.00 42.11 3.60
204 205 6.183360 CGTACTGTACTCTAGAAGTAAGCGTT 60.183 42.308 15.35 0.00 42.11 4.84
205 206 5.290643 CGTACTGTACTCTAGAAGTAAGCGT 59.709 44.000 15.35 0.00 42.11 5.07
206 207 5.276773 CCGTACTGTACTCTAGAAGTAAGCG 60.277 48.000 15.35 5.04 42.11 4.68
207 208 5.503846 GCCGTACTGTACTCTAGAAGTAAGC 60.504 48.000 15.35 6.69 42.11 3.09
208 209 5.276773 CGCCGTACTGTACTCTAGAAGTAAG 60.277 48.000 15.35 6.09 42.11 2.34
209 210 4.568359 CGCCGTACTGTACTCTAGAAGTAA 59.432 45.833 15.35 0.00 42.11 2.24
210 211 4.115516 CGCCGTACTGTACTCTAGAAGTA 58.884 47.826 15.35 0.00 39.55 2.24
211 212 2.935201 CGCCGTACTGTACTCTAGAAGT 59.065 50.000 15.35 0.00 42.33 3.01
212 213 2.286301 GCGCCGTACTGTACTCTAGAAG 60.286 54.545 15.35 0.00 0.00 2.85
213 214 1.667724 GCGCCGTACTGTACTCTAGAA 59.332 52.381 15.35 0.00 0.00 2.10
214 215 1.293924 GCGCCGTACTGTACTCTAGA 58.706 55.000 15.35 0.00 0.00 2.43
215 216 0.042361 CGCGCCGTACTGTACTCTAG 60.042 60.000 15.35 5.97 0.00 2.43
216 217 1.431488 CCGCGCCGTACTGTACTCTA 61.431 60.000 15.35 0.00 0.00 2.43
217 218 2.758089 CCGCGCCGTACTGTACTCT 61.758 63.158 15.35 0.00 0.00 3.24
218 219 2.277756 CCGCGCCGTACTGTACTC 60.278 66.667 15.35 6.69 0.00 2.59
219 220 4.487412 GCCGCGCCGTACTGTACT 62.487 66.667 15.35 0.00 0.00 2.73
220 221 4.781959 TGCCGCGCCGTACTGTAC 62.782 66.667 0.00 7.90 0.00 2.90
221 222 3.570621 TTTGCCGCGCCGTACTGTA 62.571 57.895 0.00 0.00 0.00 2.74
222 223 4.973055 TTTGCCGCGCCGTACTGT 62.973 61.111 0.00 0.00 0.00 3.55
223 224 4.147322 CTTTGCCGCGCCGTACTG 62.147 66.667 0.00 0.00 0.00 2.74
233 234 2.276617 CATACACGCGCTTTGCCG 60.277 61.111 5.73 0.00 42.08 5.69
234 235 2.576847 GCATACACGCGCTTTGCC 60.577 61.111 5.73 0.00 42.08 4.52
242 243 1.904144 TGAACTAGACGCATACACGC 58.096 50.000 0.00 0.00 36.19 5.34
243 244 4.027621 GTCATTGAACTAGACGCATACACG 60.028 45.833 0.00 0.00 39.50 4.49
244 245 5.103000 AGTCATTGAACTAGACGCATACAC 58.897 41.667 0.00 0.00 37.36 2.90
245 246 5.324784 AGTCATTGAACTAGACGCATACA 57.675 39.130 0.00 0.00 37.36 2.29
246 247 7.701078 TCTTTAGTCATTGAACTAGACGCATAC 59.299 37.037 0.00 0.00 37.36 2.39
247 248 7.768240 TCTTTAGTCATTGAACTAGACGCATA 58.232 34.615 0.00 0.00 37.36 3.14
248 249 6.631016 TCTTTAGTCATTGAACTAGACGCAT 58.369 36.000 0.00 0.00 37.36 4.73
249 250 6.020971 TCTTTAGTCATTGAACTAGACGCA 57.979 37.500 0.00 0.00 37.36 5.24
250 251 6.094061 ACTCTTTAGTCATTGAACTAGACGC 58.906 40.000 0.00 0.00 37.36 5.19
270 271 6.547510 ACAAGCTCAAATTAAACCTTGACTCT 59.452 34.615 12.79 1.36 35.09 3.24
314 315 3.985925 CGAGTAACTTGTTAGTTCGGCTT 59.014 43.478 14.33 0.00 43.45 4.35
321 322 5.221501 TGGGCTAAACGAGTAACTTGTTAGT 60.222 40.000 0.00 0.96 37.12 2.24
353 354 2.225467 GATGCTTATCTGGTGCCCTTC 58.775 52.381 0.00 0.00 0.00 3.46
360 361 7.886629 ACAACAATATTGATGCTTATCTGGT 57.113 32.000 22.16 0.00 34.71 4.00
426 428 2.606272 CTCGTTAAGCCCGTTATGAACC 59.394 50.000 0.00 0.00 0.00 3.62
436 439 3.939592 AGCTCATTTAACTCGTTAAGCCC 59.060 43.478 7.31 0.00 36.52 5.19
563 1662 1.085091 GTTGAGTCGAGCTAGTCCGA 58.915 55.000 4.83 4.83 0.00 4.55
566 1665 3.833545 TCAAGTTGAGTCGAGCTAGTC 57.166 47.619 0.08 0.00 0.00 2.59
623 1723 2.547211 GTGATGCAAATCGGAGGAGATG 59.453 50.000 0.00 0.00 0.00 2.90
624 1724 2.486191 GGTGATGCAAATCGGAGGAGAT 60.486 50.000 0.00 0.00 0.00 2.75
647 1747 5.886715 TCATTTTGCTCGATTTGTTTGTG 57.113 34.783 0.00 0.00 0.00 3.33
676 1804 1.806542 AGCTTTACACGTCCATGCTTG 59.193 47.619 0.00 0.00 0.00 4.01
735 1865 6.607198 ACATCTTTTCCACATATAACCCCAAG 59.393 38.462 0.00 0.00 0.00 3.61
743 1873 8.040727 CCGGATGATACATCTTTTCCACATATA 58.959 37.037 0.00 0.00 0.00 0.86
763 1893 3.704231 CTGCTTCCACCCCCGGATG 62.704 68.421 0.73 0.00 34.19 3.51
787 1917 3.515502 TGATGGATCCGATCTGGGTATTC 59.484 47.826 18.88 0.00 38.76 1.75
788 1918 3.261897 GTGATGGATCCGATCTGGGTATT 59.738 47.826 18.88 0.00 38.76 1.89
789 1919 2.834549 GTGATGGATCCGATCTGGGTAT 59.165 50.000 18.88 1.43 38.76 2.73
790 1920 2.248248 GTGATGGATCCGATCTGGGTA 58.752 52.381 18.88 0.00 38.76 3.69
799 1929 2.969238 GCTGGCGTGATGGATCCG 60.969 66.667 7.39 0.00 0.00 4.18
832 1962 0.594602 GTGGGCGTTTAGGGTTTGTC 59.405 55.000 0.00 0.00 0.00 3.18
833 1963 0.824595 GGTGGGCGTTTAGGGTTTGT 60.825 55.000 0.00 0.00 0.00 2.83
854 1985 3.371965 ACGATGGGGAATATATAGCGGT 58.628 45.455 0.00 0.00 0.00 5.68
880 2011 0.181587 CGGCTAGAGGAGTGAGGAGA 59.818 60.000 0.00 0.00 0.00 3.71
1050 2184 2.125753 AGCGCCGAGAAAGAGCAG 60.126 61.111 2.29 0.00 0.00 4.24
1094 2228 1.321074 ACCGGGGAAGCTACGAAGAG 61.321 60.000 6.32 0.00 0.00 2.85
1122 2257 2.429478 CACAAGAGCATCCACACATCA 58.571 47.619 0.00 0.00 33.66 3.07
1126 2261 0.520404 CAGCACAAGAGCATCCACAC 59.480 55.000 0.00 0.00 36.85 3.82
1130 2265 1.580845 AACGCAGCACAAGAGCATCC 61.581 55.000 0.00 0.00 36.85 3.51
1142 2277 1.148310 TGCTAGAACAAGAACGCAGC 58.852 50.000 0.00 0.00 0.00 5.25
1163 2298 1.475280 TCACATGGTACTACTCGGCAC 59.525 52.381 0.00 0.00 0.00 5.01
1211 2346 3.744214 GCATCGGAACTACAATCCCATCA 60.744 47.826 0.00 0.00 33.13 3.07
1214 2349 1.472552 CGCATCGGAACTACAATCCCA 60.473 52.381 0.00 0.00 33.13 4.37
1220 2355 2.063266 GTTTGTCGCATCGGAACTACA 58.937 47.619 0.00 0.00 0.00 2.74
1223 2358 1.798813 GAAGTTTGTCGCATCGGAACT 59.201 47.619 0.00 0.00 0.00 3.01
1430 2566 4.575236 TGTCATCTCGCTACCTACACTAAG 59.425 45.833 0.00 0.00 0.00 2.18
1438 2574 3.150767 GGTAGATGTCATCTCGCTACCT 58.849 50.000 18.74 0.00 44.76 3.08
1445 2581 4.657436 AAACCGAGGTAGATGTCATCTC 57.343 45.455 18.74 10.43 40.76 2.75
1452 2588 3.226346 TCACGAAAACCGAGGTAGATG 57.774 47.619 0.00 0.00 41.76 2.90
1469 2605 3.193263 CACAGACACCATAGAGCATCAC 58.807 50.000 0.00 0.00 37.82 3.06
1479 2615 1.072331 GGAAGTGGACACAGACACCAT 59.928 52.381 5.14 0.00 38.34 3.55
1481 2617 0.759346 AGGAAGTGGACACAGACACC 59.241 55.000 5.14 1.22 38.34 4.16
1486 2622 1.605710 CAAGCAAGGAAGTGGACACAG 59.394 52.381 5.14 0.00 0.00 3.66
1487 2623 1.064758 ACAAGCAAGGAAGTGGACACA 60.065 47.619 5.14 0.00 0.00 3.72
1488 2624 1.680338 ACAAGCAAGGAAGTGGACAC 58.320 50.000 0.00 0.00 0.00 3.67
1489 2625 2.435372 AACAAGCAAGGAAGTGGACA 57.565 45.000 0.00 0.00 0.00 4.02
1490 2626 4.072131 TCATAACAAGCAAGGAAGTGGAC 58.928 43.478 0.00 0.00 0.00 4.02
1496 2645 3.755905 TCGCAATCATAACAAGCAAGGAA 59.244 39.130 0.00 0.00 0.00 3.36
1537 2686 6.347240 CCATTTCATCTCGACTAGCAAATAGC 60.347 42.308 0.00 0.00 46.19 2.97
1538 2687 6.703607 ACCATTTCATCTCGACTAGCAAATAG 59.296 38.462 0.00 0.00 37.53 1.73
1541 2690 4.832248 ACCATTTCATCTCGACTAGCAAA 58.168 39.130 0.00 0.00 0.00 3.68
1554 2711 8.853126 CATATACATCTGTTCCAACCATTTCAT 58.147 33.333 0.00 0.00 0.00 2.57
1571 2728 8.986477 TGATGCATACTGTGTACATATACATC 57.014 34.615 15.42 15.42 43.21 3.06
1583 2740 4.692155 TGAACAGAACTGATGCATACTGTG 59.308 41.667 17.20 7.61 38.35 3.66
1584 2741 4.898320 TGAACAGAACTGATGCATACTGT 58.102 39.130 0.00 8.01 39.70 3.55
1598 2755 3.758755 AGAGCATGTCACTGAACAGAA 57.241 42.857 8.87 0.00 31.50 3.02
1601 2758 6.486320 TGAAATAAAGAGCATGTCACTGAACA 59.514 34.615 0.00 0.00 0.00 3.18
1630 2787 2.288579 TGTGTACACACCCGAAAGCTAG 60.289 50.000 24.62 0.00 45.88 3.42
1632 2789 0.466543 TGTGTACACACCCGAAAGCT 59.533 50.000 24.62 0.00 45.88 3.74
1638 2795 2.230508 ACTACAGATGTGTACACACCCG 59.769 50.000 30.11 21.54 45.88 5.28
1641 2798 6.418956 CAACAAACTACAGATGTGTACACAC 58.581 40.000 30.11 21.98 45.05 3.82
1642 2799 5.007234 GCAACAAACTACAGATGTGTACACA 59.993 40.000 29.70 29.70 46.44 3.72
1643 2800 5.440685 GCAACAAACTACAGATGTGTACAC 58.559 41.667 19.36 19.36 38.19 2.90
1667 2824 5.049198 ACAGAACTGAACTTGTGCATATGTG 60.049 40.000 8.87 0.00 0.00 3.21
1669 2826 5.049198 ACACAGAACTGAACTTGTGCATATG 60.049 40.000 8.87 0.00 0.00 1.78
1670 2827 5.065914 ACACAGAACTGAACTTGTGCATAT 58.934 37.500 8.87 0.00 0.00 1.78
1671 2828 4.450976 ACACAGAACTGAACTTGTGCATA 58.549 39.130 8.87 0.00 0.00 3.14
1696 2853 9.661563 TTGGACGTATCTACTTGACATATTTTT 57.338 29.630 0.00 0.00 0.00 1.94
1697 2854 9.314321 CTTGGACGTATCTACTTGACATATTTT 57.686 33.333 0.00 0.00 0.00 1.82
1698 2855 8.475639 ACTTGGACGTATCTACTTGACATATTT 58.524 33.333 0.00 0.00 0.00 1.40
1699 2856 8.008513 ACTTGGACGTATCTACTTGACATATT 57.991 34.615 0.00 0.00 0.00 1.28
1700 2857 7.584122 ACTTGGACGTATCTACTTGACATAT 57.416 36.000 0.00 0.00 0.00 1.78
1701 2858 7.121611 TGAACTTGGACGTATCTACTTGACATA 59.878 37.037 0.00 0.00 0.00 2.29
1702 2859 5.916661 ACTTGGACGTATCTACTTGACAT 57.083 39.130 0.00 0.00 0.00 3.06
1703 2860 5.242171 TGAACTTGGACGTATCTACTTGACA 59.758 40.000 0.00 0.00 0.00 3.58
1704 2861 5.706916 TGAACTTGGACGTATCTACTTGAC 58.293 41.667 0.00 0.00 0.00 3.18
1705 2862 5.475909 ACTGAACTTGGACGTATCTACTTGA 59.524 40.000 0.00 0.00 0.00 3.02
1706 2863 5.710984 ACTGAACTTGGACGTATCTACTTG 58.289 41.667 0.00 0.00 0.00 3.16
1707 2864 5.979288 ACTGAACTTGGACGTATCTACTT 57.021 39.130 0.00 0.00 0.00 2.24
1708 2865 5.475909 TCAACTGAACTTGGACGTATCTACT 59.524 40.000 0.00 0.00 0.00 2.57
1709 2866 5.706916 TCAACTGAACTTGGACGTATCTAC 58.293 41.667 0.00 0.00 0.00 2.59
1710 2867 5.970317 TCAACTGAACTTGGACGTATCTA 57.030 39.130 0.00 0.00 0.00 1.98
1711 2868 4.866508 TCAACTGAACTTGGACGTATCT 57.133 40.909 0.00 0.00 0.00 1.98
1712 2869 6.757010 ACATATCAACTGAACTTGGACGTATC 59.243 38.462 0.00 0.00 0.00 2.24
1713 2870 6.640518 ACATATCAACTGAACTTGGACGTAT 58.359 36.000 0.00 0.00 0.00 3.06
1714 2871 6.032956 ACATATCAACTGAACTTGGACGTA 57.967 37.500 0.00 0.00 0.00 3.57
1715 2872 4.894784 ACATATCAACTGAACTTGGACGT 58.105 39.130 0.00 0.00 0.00 4.34
1716 2873 6.330278 TCTACATATCAACTGAACTTGGACG 58.670 40.000 0.00 0.00 0.00 4.79
1717 2874 7.766278 ACATCTACATATCAACTGAACTTGGAC 59.234 37.037 0.00 0.00 0.00 4.02
1718 2875 7.765819 CACATCTACATATCAACTGAACTTGGA 59.234 37.037 0.00 0.00 0.00 3.53
1719 2876 7.550551 ACACATCTACATATCAACTGAACTTGG 59.449 37.037 0.00 0.00 0.00 3.61
1720 2877 8.484641 ACACATCTACATATCAACTGAACTTG 57.515 34.615 0.00 0.00 0.00 3.16
1722 2879 9.973450 GATACACATCTACATATCAACTGAACT 57.027 33.333 0.00 0.00 0.00 3.01
1723 2880 9.973450 AGATACACATCTACATATCAACTGAAC 57.027 33.333 0.00 0.00 39.85 3.18
1724 2881 9.971922 CAGATACACATCTACATATCAACTGAA 57.028 33.333 0.00 0.00 39.62 3.02
1725 2882 9.136323 ACAGATACACATCTACATATCAACTGA 57.864 33.333 0.00 0.00 39.62 3.41
1731 2888 9.847706 CCAACTACAGATACACATCTACATATC 57.152 37.037 0.00 0.00 39.62 1.63
1732 2889 9.368416 ACCAACTACAGATACACATCTACATAT 57.632 33.333 0.00 0.00 39.62 1.78
1733 2890 8.762481 ACCAACTACAGATACACATCTACATA 57.238 34.615 0.00 0.00 39.62 2.29
1734 2891 7.661536 ACCAACTACAGATACACATCTACAT 57.338 36.000 0.00 0.00 39.62 2.29
1735 2892 7.320399 CAACCAACTACAGATACACATCTACA 58.680 38.462 0.00 0.00 39.62 2.74
1736 2893 6.255887 GCAACCAACTACAGATACACATCTAC 59.744 42.308 0.00 0.00 39.62 2.59
1737 2894 6.071051 TGCAACCAACTACAGATACACATCTA 60.071 38.462 0.00 0.00 39.62 1.98
1738 2895 5.178797 GCAACCAACTACAGATACACATCT 58.821 41.667 0.00 0.00 42.52 2.90
1739 2896 4.935205 TGCAACCAACTACAGATACACATC 59.065 41.667 0.00 0.00 0.00 3.06
1740 2897 4.905429 TGCAACCAACTACAGATACACAT 58.095 39.130 0.00 0.00 0.00 3.21
1741 2898 4.344359 TGCAACCAACTACAGATACACA 57.656 40.909 0.00 0.00 0.00 3.72
1742 2899 5.030874 GTTGCAACCAACTACAGATACAC 57.969 43.478 19.15 0.00 46.13 2.90
1785 2942 6.915544 ACATAGCACAAGAACATCTACATG 57.084 37.500 0.00 0.00 35.92 3.21
1815 2975 2.386661 TCTACTTGGCACTTGCTAGC 57.613 50.000 8.10 8.10 41.70 3.42
1841 3001 4.700213 CCCGGTATAAATCAGCCTAAATGG 59.300 45.833 0.00 0.00 39.35 3.16
1861 3021 2.088674 GATGTCATCCTCCGACCCCG 62.089 65.000 0.90 0.00 32.15 5.73
1868 3028 1.536284 GGAACGACGATGTCATCCTCC 60.536 57.143 0.00 2.80 36.15 4.30
1877 3037 2.368856 TCGCATTGGAACGACGATG 58.631 52.632 0.00 0.00 35.71 3.84
1897 3057 3.751698 GGACCGTCAATAAGCTCAGTTTT 59.248 43.478 0.00 0.00 0.00 2.43
2067 3227 5.650266 TCTGAGCAAACTGAAACCAAACTAA 59.350 36.000 0.00 0.00 0.00 2.24
2090 3313 6.072783 GCAAGGAGCTGGACATATTCTAAATC 60.073 42.308 0.00 0.00 41.15 2.17
2091 3314 5.767168 GCAAGGAGCTGGACATATTCTAAAT 59.233 40.000 0.00 0.00 41.15 1.40
2327 3575 7.230510 TGAGCAAACTCCAACAACATAACTATT 59.769 33.333 0.00 0.00 42.74 1.73
2355 3604 6.018832 CCAACTTAACAAGCAACAGGAAAATG 60.019 38.462 0.00 0.00 0.00 2.32
2410 3660 7.613801 TCACCCATGCTTACATTAGTTAAACAT 59.386 33.333 0.00 0.00 32.87 2.71
2418 3668 6.949352 AGAATTCACCCATGCTTACATTAG 57.051 37.500 8.44 0.00 32.87 1.73
2433 3683 7.328737 ACGTGTCTTACTGTGATAAGAATTCAC 59.671 37.037 8.44 0.00 41.67 3.18
2522 3772 2.427506 CCCAAGTGGCTCTTCTTGTAC 58.572 52.381 0.00 0.00 39.25 2.90
2626 3876 6.981722 ACATGAGATAAAAACAAGGGAACAC 58.018 36.000 0.00 0.00 0.00 3.32
2910 4230 1.740380 CGACCGAATCCAGCAATCAGT 60.740 52.381 0.00 0.00 0.00 3.41
3021 4341 1.450360 AAGACCTGGGCTTCTCCTTT 58.550 50.000 9.59 0.00 34.39 3.11
3357 4702 6.434302 ACTATCCAATCCAATCCACATTTCA 58.566 36.000 0.00 0.00 0.00 2.69
3360 4705 5.599656 CCAACTATCCAATCCAATCCACATT 59.400 40.000 0.00 0.00 0.00 2.71
3361 4706 5.142639 CCAACTATCCAATCCAATCCACAT 58.857 41.667 0.00 0.00 0.00 3.21
3380 4725 4.887655 CCCAACTATCCAATCTAACCCAAC 59.112 45.833 0.00 0.00 0.00 3.77
3398 4743 3.751518 ACAGTCCACAATCTAACCCAAC 58.248 45.455 0.00 0.00 0.00 3.77
3399 4744 4.447138 AACAGTCCACAATCTAACCCAA 57.553 40.909 0.00 0.00 0.00 4.12
3400 4745 4.447138 AAACAGTCCACAATCTAACCCA 57.553 40.909 0.00 0.00 0.00 4.51
3401 4746 5.784578 AAAAACAGTCCACAATCTAACCC 57.215 39.130 0.00 0.00 0.00 4.11
3433 4778 5.067023 AGCTCAGAACATTGCTAATTTAGGC 59.933 40.000 5.61 0.00 33.64 3.93
3434 4779 6.238593 GGAGCTCAGAACATTGCTAATTTAGG 60.239 42.308 17.19 0.00 35.76 2.69
3450 4795 2.244486 AAGACTCCATGGAGCTCAGA 57.756 50.000 36.78 4.15 45.54 3.27
3509 4854 9.877178 AGAACGTGTAGATTTTTCTCAGAATAT 57.123 29.630 0.00 0.00 0.00 1.28
3556 4901 8.191446 TCGTGATTTTGAAAATGGTTTAACAGA 58.809 29.630 8.03 0.00 0.00 3.41
3557 4902 8.346476 TCGTGATTTTGAAAATGGTTTAACAG 57.654 30.769 8.03 0.00 0.00 3.16
3574 4920 6.710744 ACACTAGGAAGACAAAATCGTGATTT 59.289 34.615 2.04 2.04 42.35 2.17
3642 4992 5.288712 CACACGCGTTCTTACAGATAATTCT 59.711 40.000 10.22 0.00 0.00 2.40
3644 4994 5.165676 TCACACGCGTTCTTACAGATAATT 58.834 37.500 10.22 0.00 0.00 1.40
3646 4996 4.163458 TCACACGCGTTCTTACAGATAA 57.837 40.909 10.22 0.00 0.00 1.75
3655 5005 4.304110 TCTAAAAAGATCACACGCGTTCT 58.696 39.130 10.22 7.30 0.00 3.01
3736 5093 8.890410 ATATAGGGATGAAAATGCTAAATGCT 57.110 30.769 0.00 0.00 43.37 3.79
3754 5121 5.537674 ACAACTTCAGGGTACGTATATAGGG 59.462 44.000 0.00 0.00 0.00 3.53
3767 5134 2.753452 TCTCGCTAGTACAACTTCAGGG 59.247 50.000 0.00 0.00 0.00 4.45
3796 5163 1.742831 GTCAACAGCACACAAGGAACA 59.257 47.619 0.00 0.00 0.00 3.18
3797 5164 2.017049 AGTCAACAGCACACAAGGAAC 58.983 47.619 0.00 0.00 0.00 3.62
3800 5167 1.331756 GACAGTCAACAGCACACAAGG 59.668 52.381 0.00 0.00 0.00 3.61
3802 5169 1.006086 CGACAGTCAACAGCACACAA 58.994 50.000 0.41 0.00 0.00 3.33
3803 5170 1.428370 GCGACAGTCAACAGCACACA 61.428 55.000 0.41 0.00 0.00 3.72
3804 5171 1.154205 AGCGACAGTCAACAGCACAC 61.154 55.000 0.41 0.00 0.00 3.82
3805 5172 0.387565 TAGCGACAGTCAACAGCACA 59.612 50.000 0.41 0.00 0.00 4.57
3806 5173 1.714794 ATAGCGACAGTCAACAGCAC 58.285 50.000 0.41 0.00 0.00 4.40
3842 5209 8.914011 GGGTAGATAAAACTTGCTATCCAAATT 58.086 33.333 0.00 0.00 34.86 1.82
3897 5264 5.010415 TGTCATTATGGAATTTGCACACACA 59.990 36.000 0.00 0.00 0.00 3.72
3898 5265 5.468592 TGTCATTATGGAATTTGCACACAC 58.531 37.500 0.00 0.00 0.00 3.82
3937 5304 8.683550 TTTCAGTGTGAGTTACTATACAATCG 57.316 34.615 3.97 0.60 0.00 3.34
3951 5319 4.095410 TGCACAACTTTTTCAGTGTGAG 57.905 40.909 6.82 0.00 37.00 3.51
3960 5328 6.105333 TCAGCTGTTATTTGCACAACTTTTT 58.895 32.000 14.67 0.00 0.00 1.94
3963 5331 4.916983 TCAGCTGTTATTTGCACAACTT 57.083 36.364 14.67 0.00 0.00 2.66
3968 5336 7.816945 AAACATAATCAGCTGTTATTTGCAC 57.183 32.000 14.67 0.00 34.61 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.