Multiple sequence alignment - TraesCS1A01G288100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G288100 chr1A 100.000 4473 0 0 1 4473 485341342 485336870 0.000000e+00 8261.0
1 TraesCS1A01G288100 chr1A 87.845 181 19 2 3648 3827 547885859 547885681 4.530000e-50 209.0
2 TraesCS1A01G288100 chr1B 90.474 1816 108 20 1 1790 517905388 517903612 0.000000e+00 2335.0
3 TraesCS1A01G288100 chr1B 92.673 1433 83 12 2193 3606 517903180 517901751 0.000000e+00 2045.0
4 TraesCS1A01G288100 chr1B 95.681 301 7 1 1785 2079 517903495 517903195 3.130000e-131 479.0
5 TraesCS1A01G288100 chr1B 87.463 335 37 3 4064 4395 679382745 679383077 9.080000e-102 381.0
6 TraesCS1A01G288100 chr1B 85.672 335 45 2 4064 4395 585850491 585850157 2.560000e-92 350.0
7 TraesCS1A01G288100 chr1B 97.959 49 1 0 4407 4455 517901562 517901514 7.970000e-13 86.1
8 TraesCS1A01G288100 chr1B 96.000 50 2 0 3603 3652 517901594 517901545 1.030000e-11 82.4
9 TraesCS1A01G288100 chr1D 95.177 1472 54 9 2193 3648 385616898 385615428 0.000000e+00 2309.0
10 TraesCS1A01G288100 chr1D 87.884 1857 98 47 1 1790 385619094 385617298 0.000000e+00 2065.0
11 TraesCS1A01G288100 chr1D 94.966 298 11 2 1785 2079 385617209 385616913 8.760000e-127 464.0
12 TraesCS1A01G288100 chr1D 100.000 28 0 0 4428 4455 385606840 385606813 8.000000e-03 52.8
13 TraesCS1A01G288100 chr3D 95.015 341 14 1 4064 4401 466292170 466292510 2.370000e-147 532.0
14 TraesCS1A01G288100 chr3D 96.685 181 5 1 3648 3827 466291992 466292172 2.620000e-77 300.0
15 TraesCS1A01G288100 chr3D 90.608 181 15 2 3648 3827 499865638 499865817 5.780000e-59 239.0
16 TraesCS1A01G288100 chr5B 92.836 335 21 1 4064 4395 543254180 543254514 2.420000e-132 483.0
17 TraesCS1A01G288100 chr5B 93.889 180 11 0 3648 3827 543254003 543254182 5.700000e-69 272.0
18 TraesCS1A01G288100 chr5A 92.375 341 23 2 4064 4401 433557920 433557580 2.420000e-132 483.0
19 TraesCS1A01G288100 chr5A 95.868 242 10 0 3825 4066 522073916 522073675 4.190000e-105 392.0
20 TraesCS1A01G288100 chr5A 93.855 179 11 0 3649 3827 433558096 433557918 2.050000e-68 270.0
21 TraesCS1A01G288100 chr2B 90.746 335 28 1 4064 4395 222583048 222582714 1.140000e-120 444.0
22 TraesCS1A01G288100 chr2B 95.868 242 10 0 3824 4065 784548178 784548419 4.190000e-105 392.0
23 TraesCS1A01G288100 chr2B 92.265 181 14 0 3647 3827 222583226 222583046 1.600000e-64 257.0
24 TraesCS1A01G288100 chr7A 94.815 270 11 1 4064 4330 94170430 94170161 6.920000e-113 418.0
25 TraesCS1A01G288100 chr7A 94.815 270 11 1 4064 4330 94207684 94207415 6.920000e-113 418.0
26 TraesCS1A01G288100 chr7A 96.680 241 8 0 3824 4064 362740384 362740144 6.970000e-108 401.0
27 TraesCS1A01G288100 chr7A 95.142 247 12 0 3823 4069 276118473 276118719 1.510000e-104 390.0
28 TraesCS1A01G288100 chr7A 95.604 182 6 2 3648 3827 94207863 94207682 1.570000e-74 291.0
29 TraesCS1A01G288100 chr7A 95.055 182 7 2 3648 3827 94170609 94170428 7.320000e-73 285.0
30 TraesCS1A01G288100 chr7A 96.203 79 3 0 4323 4401 94154883 94154805 3.630000e-26 130.0
31 TraesCS1A01G288100 chr4D 96.680 241 8 0 3825 4065 30506666 30506426 6.970000e-108 401.0
32 TraesCS1A01G288100 chr4D 95.918 245 9 1 3825 4068 11504355 11504111 3.240000e-106 396.0
33 TraesCS1A01G288100 chr6D 95.885 243 10 0 3823 4065 80054320 80054078 1.170000e-105 394.0
34 TraesCS1A01G288100 chr6D 95.510 245 10 1 3822 4065 227008006 227007762 1.510000e-104 390.0
35 TraesCS1A01G288100 chr3A 95.868 242 10 0 3824 4065 667194495 667194736 4.190000e-105 392.0
36 TraesCS1A01G288100 chr7D 86.885 183 19 5 3648 3827 397607186 397607006 2.730000e-47 200.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G288100 chr1A 485336870 485341342 4472 True 8261.000000 8261 100.000000 1 4473 1 chr1A.!!$R1 4472
1 TraesCS1A01G288100 chr1B 517901514 517905388 3874 True 1005.500000 2335 94.557400 1 4455 5 chr1B.!!$R2 4454
2 TraesCS1A01G288100 chr1D 385615428 385619094 3666 True 1612.666667 2309 92.675667 1 3648 3 chr1D.!!$R2 3647
3 TraesCS1A01G288100 chr3D 466291992 466292510 518 False 416.000000 532 95.850000 3648 4401 2 chr3D.!!$F2 753
4 TraesCS1A01G288100 chr5B 543254003 543254514 511 False 377.500000 483 93.362500 3648 4395 2 chr5B.!!$F1 747
5 TraesCS1A01G288100 chr5A 433557580 433558096 516 True 376.500000 483 93.115000 3649 4401 2 chr5A.!!$R2 752
6 TraesCS1A01G288100 chr2B 222582714 222583226 512 True 350.500000 444 91.505500 3647 4395 2 chr2B.!!$R1 748

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 264 0.304705 GTCGGCGGCAATATTCTGTG 59.695 55.0 6.63 0.0 0.00 3.66 F
1440 1487 0.040958 GCAAATGACCGATCCGCATC 60.041 55.0 0.00 0.0 0.00 3.91 F
2148 2349 0.179181 TACGACGATCACGACTTGCC 60.179 55.0 14.58 0.0 42.66 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2182 2383 0.176680 CGGTCAGGTTCAGCTAGCAT 59.823 55.0 18.83 0.0 0.0 3.79 R
2466 2681 0.251832 GTGTCACTCTCCCTCTCCCA 60.252 60.0 0.00 0.0 0.0 4.37 R
3846 4226 0.032017 ACGGGGATAGAGGAAGCACT 60.032 55.0 0.00 0.0 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 1.855360 GCTGACCATCTTCGTTCGATC 59.145 52.381 0.00 0.00 0.00 3.69
87 88 2.209838 TCGTTCGATCCTGCAAGATC 57.790 50.000 14.31 14.31 39.47 2.75
96 97 4.083110 CGATCCTGCAAGATCACAAAAACT 60.083 41.667 22.09 0.00 42.40 2.66
105 106 7.013178 TGCAAGATCACAAAAACTGATTAGTCA 59.987 33.333 0.00 0.00 35.69 3.41
129 130 5.127845 AGTGATGACATACAAGTCGAAGGAT 59.872 40.000 0.00 0.00 41.41 3.24
130 131 5.233050 GTGATGACATACAAGTCGAAGGATG 59.767 44.000 4.84 4.84 41.41 3.51
136 137 1.339151 ACAAGTCGAAGGATGAAGGGC 60.339 52.381 0.00 0.00 0.00 5.19
138 139 2.174319 GTCGAAGGATGAAGGGCGC 61.174 63.158 0.00 0.00 0.00 6.53
162 163 2.688507 ACCAACACGCAGTAGATCAAG 58.311 47.619 0.00 0.00 41.61 3.02
208 209 1.766143 GCTTACCGGCTTCAGCATCG 61.766 60.000 0.00 0.00 44.36 3.84
212 213 2.743752 CCGGCTTCAGCATCGTGTG 61.744 63.158 0.30 0.00 44.36 3.82
263 264 0.304705 GTCGGCGGCAATATTCTGTG 59.695 55.000 6.63 0.00 0.00 3.66
284 285 3.155167 GCGCCAGGCTACTACCCT 61.155 66.667 10.54 0.00 39.11 4.34
298 299 1.000041 TACCCTCCTCCTCCTCCTCC 61.000 65.000 0.00 0.00 0.00 4.30
299 300 2.018086 CCCTCCTCCTCCTCCTCCT 61.018 68.421 0.00 0.00 0.00 3.69
300 301 1.541672 CCTCCTCCTCCTCCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
301 302 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
302 303 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
303 304 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
304 305 1.150536 CTCCTCCTCCTCCTCCTCG 59.849 68.421 0.00 0.00 0.00 4.63
305 306 2.520741 CCTCCTCCTCCTCCTCGC 60.521 72.222 0.00 0.00 0.00 5.03
306 307 2.520741 CTCCTCCTCCTCCTCGCC 60.521 72.222 0.00 0.00 0.00 5.54
326 327 1.303236 TGCAACCCACCAGATTCCG 60.303 57.895 0.00 0.00 0.00 4.30
519 520 1.227383 GTGGAATTGGGGCGGAGAT 59.773 57.895 0.00 0.00 0.00 2.75
522 523 0.819666 GGAATTGGGGCGGAGATGTC 60.820 60.000 0.00 0.00 0.00 3.06
526 527 1.488705 TTGGGGCGGAGATGTCAGTT 61.489 55.000 0.00 0.00 0.00 3.16
533 534 1.639298 GGAGATGTCAGTTGGCGCAC 61.639 60.000 10.83 0.00 0.00 5.34
538 539 1.598882 TGTCAGTTGGCGCACATTAA 58.401 45.000 10.83 0.00 0.00 1.40
539 540 2.158559 TGTCAGTTGGCGCACATTAAT 58.841 42.857 10.83 0.00 0.00 1.40
540 541 2.556189 TGTCAGTTGGCGCACATTAATT 59.444 40.909 10.83 0.00 0.00 1.40
541 542 3.753797 TGTCAGTTGGCGCACATTAATTA 59.246 39.130 10.83 0.00 0.00 1.40
605 607 2.893398 CGAGGTACCTCAGGCACC 59.107 66.667 35.32 4.65 42.86 5.01
768 776 2.597805 ATATCGGCGAGCTCGGGT 60.598 61.111 35.10 19.58 40.23 5.28
769 777 1.303074 ATATCGGCGAGCTCGGGTA 60.303 57.895 35.10 21.07 40.23 3.69
770 778 1.306642 ATATCGGCGAGCTCGGGTAG 61.307 60.000 35.10 9.75 40.23 3.18
888 896 1.454847 TTCGTGGGCTGGTTTTGCT 60.455 52.632 0.00 0.00 0.00 3.91
894 902 2.102420 GTGGGCTGGTTTTGCTTAACTT 59.898 45.455 2.38 0.00 0.00 2.66
1093 1101 0.386858 GCGCTATCGACGGCATAGAA 60.387 55.000 0.00 0.00 38.10 2.10
1121 1135 1.001406 CGGCAGAAGACAGAAGAAGGT 59.999 52.381 0.00 0.00 0.00 3.50
1122 1136 2.421619 GGCAGAAGACAGAAGAAGGTG 58.578 52.381 0.00 0.00 0.00 4.00
1123 1137 2.037772 GGCAGAAGACAGAAGAAGGTGA 59.962 50.000 0.00 0.00 0.00 4.02
1125 1139 3.932089 GCAGAAGACAGAAGAAGGTGATC 59.068 47.826 0.00 0.00 0.00 2.92
1127 1141 5.410067 CAGAAGACAGAAGAAGGTGATCTC 58.590 45.833 0.00 0.00 0.00 2.75
1128 1142 5.185635 CAGAAGACAGAAGAAGGTGATCTCT 59.814 44.000 0.00 0.00 0.00 3.10
1129 1143 5.779771 AGAAGACAGAAGAAGGTGATCTCTT 59.220 40.000 0.00 0.00 0.00 2.85
1135 1157 6.269769 ACAGAAGAAGGTGATCTCTTTCTCTT 59.730 38.462 18.84 7.77 30.52 2.85
1141 1163 5.303971 AGGTGATCTCTTTCTCTTGTGTTG 58.696 41.667 0.00 0.00 0.00 3.33
1158 1180 6.551385 TGTGTTGACATTTTTGTTTTGCTT 57.449 29.167 0.00 0.00 0.00 3.91
1174 1200 3.070476 TGCTTGATCTGTGGCAATGTA 57.930 42.857 0.00 0.00 0.00 2.29
1178 1204 4.337555 GCTTGATCTGTGGCAATGTAGATT 59.662 41.667 0.00 0.00 30.49 2.40
1179 1205 5.732528 GCTTGATCTGTGGCAATGTAGATTG 60.733 44.000 8.21 8.21 41.82 2.67
1180 1206 4.201657 TGATCTGTGGCAATGTAGATTGG 58.798 43.478 13.92 0.00 39.62 3.16
1181 1207 3.998913 TCTGTGGCAATGTAGATTGGA 57.001 42.857 13.92 0.31 39.62 3.53
1182 1208 4.299586 TCTGTGGCAATGTAGATTGGAA 57.700 40.909 13.92 0.00 39.62 3.53
1192 1218 6.609533 CAATGTAGATTGGAATGATGCTAGC 58.390 40.000 8.10 8.10 36.12 3.42
1246 1272 7.359765 CCACTTGTTCTTGATGATTTTTGCATC 60.360 37.037 0.00 0.00 41.87 3.91
1258 1285 7.165460 TGATTTTTGCATCTTGTCATCTCAT 57.835 32.000 0.00 0.00 0.00 2.90
1309 1337 1.271434 GGGAAGAAGGTGAGGTGGTTC 60.271 57.143 0.00 0.00 0.00 3.62
1438 1485 2.460275 CGCAAATGACCGATCCGCA 61.460 57.895 0.00 0.00 0.00 5.69
1439 1486 1.775039 CGCAAATGACCGATCCGCAT 61.775 55.000 0.00 0.00 0.00 4.73
1440 1487 0.040958 GCAAATGACCGATCCGCATC 60.041 55.000 0.00 0.00 0.00 3.91
1485 1532 4.539881 GCCGAGAGACCGACGAGC 62.540 72.222 0.00 0.00 0.00 5.03
1609 1677 2.045045 CTGCGGAGGCCAAATCCA 60.045 61.111 5.01 0.00 38.85 3.41
1629 1697 2.876645 GGAACGACGAGCGAGCAG 60.877 66.667 0.00 0.00 44.57 4.24
1633 1701 2.126850 CGACGAGCGAGCAGAACA 60.127 61.111 0.00 0.00 44.57 3.18
1641 1709 1.926511 GCGAGCAGAACAATGGTGGG 61.927 60.000 0.00 0.00 0.00 4.61
1642 1710 0.606401 CGAGCAGAACAATGGTGGGT 60.606 55.000 0.00 0.00 0.00 4.51
1807 2002 6.535274 TTGCATGATCACATTTCGATCTAG 57.465 37.500 0.00 0.00 40.03 2.43
1808 2003 4.450080 TGCATGATCACATTTCGATCTAGC 59.550 41.667 0.00 0.00 40.03 3.42
1813 2014 7.823149 TGATCACATTTCGATCTAGCATATG 57.177 36.000 0.00 0.00 40.03 1.78
2035 2236 1.194781 TCAAGAGTCAGGTCCAGCCC 61.195 60.000 0.00 0.00 38.26 5.19
2065 2266 1.021202 CTGACAAAACCAAGGTGCGA 58.979 50.000 0.00 0.00 0.00 5.10
2083 2284 2.756829 CGAAGCATCATCTCATCTGCT 58.243 47.619 0.00 0.00 46.41 4.24
2084 2285 2.732500 CGAAGCATCATCTCATCTGCTC 59.267 50.000 0.00 0.00 43.82 4.26
2086 2287 1.001068 AGCATCATCTCATCTGCTCCG 59.999 52.381 0.00 0.00 40.85 4.63
2087 2288 1.000618 GCATCATCTCATCTGCTCCGA 59.999 52.381 0.00 0.00 0.00 4.55
2088 2289 2.353903 GCATCATCTCATCTGCTCCGAT 60.354 50.000 0.00 0.00 0.00 4.18
2089 2290 3.513662 CATCATCTCATCTGCTCCGATC 58.486 50.000 0.00 0.00 0.00 3.69
2090 2291 2.590821 TCATCTCATCTGCTCCGATCA 58.409 47.619 0.00 0.00 0.00 2.92
2091 2292 3.163467 TCATCTCATCTGCTCCGATCAT 58.837 45.455 0.00 0.00 0.00 2.45
2092 2293 3.193056 TCATCTCATCTGCTCCGATCATC 59.807 47.826 0.00 0.00 0.00 2.92
2093 2294 2.874014 TCTCATCTGCTCCGATCATCT 58.126 47.619 0.00 0.00 0.00 2.90
2094 2295 4.026356 TCTCATCTGCTCCGATCATCTA 57.974 45.455 0.00 0.00 0.00 1.98
2095 2296 4.598022 TCTCATCTGCTCCGATCATCTAT 58.402 43.478 0.00 0.00 0.00 1.98
2096 2297 4.639755 TCTCATCTGCTCCGATCATCTATC 59.360 45.833 0.00 0.00 0.00 2.08
2112 2313 7.098503 TCATCTATCGTACTAGTTCGTAACG 57.901 40.000 19.49 14.06 36.23 3.18
2113 2314 6.918022 TCATCTATCGTACTAGTTCGTAACGA 59.082 38.462 19.49 18.45 36.23 3.85
2114 2315 7.596621 TCATCTATCGTACTAGTTCGTAACGAT 59.403 37.037 25.56 25.56 37.38 3.73
2115 2316 7.700322 TCTATCGTACTAGTTCGTAACGATT 57.300 36.000 26.77 15.63 36.29 3.34
2116 2317 7.778386 TCTATCGTACTAGTTCGTAACGATTC 58.222 38.462 26.77 0.00 36.29 2.52
2117 2318 6.595772 ATCGTACTAGTTCGTAACGATTCT 57.404 37.500 19.85 4.83 35.23 2.40
2118 2319 6.408858 TCGTACTAGTTCGTAACGATTCTT 57.591 37.500 19.49 0.00 35.23 2.52
2119 2320 6.243551 TCGTACTAGTTCGTAACGATTCTTG 58.756 40.000 19.49 0.00 35.23 3.02
2120 2321 6.017933 CGTACTAGTTCGTAACGATTCTTGT 58.982 40.000 13.17 0.00 35.23 3.16
2121 2322 6.521133 CGTACTAGTTCGTAACGATTCTTGTT 59.479 38.462 13.17 0.00 35.23 2.83
2122 2323 6.924629 ACTAGTTCGTAACGATTCTTGTTC 57.075 37.500 0.00 0.00 35.23 3.18
2123 2324 6.441274 ACTAGTTCGTAACGATTCTTGTTCA 58.559 36.000 0.00 0.00 35.23 3.18
2124 2325 7.088905 ACTAGTTCGTAACGATTCTTGTTCAT 58.911 34.615 0.00 0.00 35.23 2.57
2125 2326 8.239314 ACTAGTTCGTAACGATTCTTGTTCATA 58.761 33.333 0.00 0.00 35.23 2.15
2126 2327 9.234384 CTAGTTCGTAACGATTCTTGTTCATAT 57.766 33.333 0.00 0.00 35.23 1.78
2127 2328 7.895870 AGTTCGTAACGATTCTTGTTCATATG 58.104 34.615 0.00 0.00 35.23 1.78
2128 2329 6.822073 TCGTAACGATTCTTGTTCATATGG 57.178 37.500 2.13 0.00 0.00 2.74
2129 2330 6.334989 TCGTAACGATTCTTGTTCATATGGT 58.665 36.000 2.13 0.00 0.00 3.55
2130 2331 7.482474 TCGTAACGATTCTTGTTCATATGGTA 58.518 34.615 2.13 0.00 0.00 3.25
2131 2332 7.433131 TCGTAACGATTCTTGTTCATATGGTAC 59.567 37.037 2.13 2.62 0.00 3.34
2132 2333 6.583912 AACGATTCTTGTTCATATGGTACG 57.416 37.500 2.13 0.00 0.00 3.67
2133 2334 5.898174 ACGATTCTTGTTCATATGGTACGA 58.102 37.500 2.13 1.27 0.00 3.43
2134 2335 5.747197 ACGATTCTTGTTCATATGGTACGAC 59.253 40.000 2.13 0.00 0.00 4.34
2135 2336 5.108368 CGATTCTTGTTCATATGGTACGACG 60.108 44.000 2.13 0.00 0.00 5.12
2136 2337 4.968812 TCTTGTTCATATGGTACGACGA 57.031 40.909 0.00 0.31 0.00 4.20
2137 2338 5.509716 TCTTGTTCATATGGTACGACGAT 57.490 39.130 0.00 0.00 0.00 3.73
2138 2339 5.516996 TCTTGTTCATATGGTACGACGATC 58.483 41.667 0.00 0.00 0.00 3.69
2139 2340 4.904253 TGTTCATATGGTACGACGATCA 57.096 40.909 0.00 0.00 0.00 2.92
2140 2341 4.603985 TGTTCATATGGTACGACGATCAC 58.396 43.478 0.00 0.00 0.00 3.06
2141 2342 3.531262 TCATATGGTACGACGATCACG 57.469 47.619 0.00 7.58 45.75 4.35
2142 2343 3.132925 TCATATGGTACGACGATCACGA 58.867 45.455 14.58 0.00 42.66 4.35
2143 2344 3.059393 TCATATGGTACGACGATCACGAC 60.059 47.826 14.58 8.87 42.66 4.34
2144 2345 1.376543 ATGGTACGACGATCACGACT 58.623 50.000 14.58 0.00 42.66 4.18
2145 2346 1.159285 TGGTACGACGATCACGACTT 58.841 50.000 14.58 0.00 42.66 3.01
2146 2347 1.135888 TGGTACGACGATCACGACTTG 60.136 52.381 14.58 0.00 42.66 3.16
2147 2348 0.905839 GTACGACGATCACGACTTGC 59.094 55.000 14.58 0.00 42.66 4.01
2148 2349 0.179181 TACGACGATCACGACTTGCC 60.179 55.000 14.58 0.00 42.66 4.52
2149 2350 2.497092 CGACGATCACGACTTGCCG 61.497 63.158 3.67 0.00 42.66 5.69
2150 2351 1.154093 GACGATCACGACTTGCCGA 60.154 57.895 0.00 0.00 42.66 5.54
2151 2352 0.525668 GACGATCACGACTTGCCGAT 60.526 55.000 0.00 0.00 42.66 4.18
2152 2353 0.525668 ACGATCACGACTTGCCGATC 60.526 55.000 0.00 0.00 42.66 3.69
2153 2354 2.208074 GATCACGACTTGCCGATCG 58.792 57.895 8.51 8.51 43.97 3.69
2154 2355 0.248498 GATCACGACTTGCCGATCGA 60.248 55.000 18.66 0.00 40.86 3.59
2155 2356 0.385751 ATCACGACTTGCCGATCGAT 59.614 50.000 18.66 0.00 40.86 3.59
2156 2357 0.248498 TCACGACTTGCCGATCGATC 60.248 55.000 18.66 15.68 40.86 3.69
2176 2377 6.761731 GATCGATCGATGTCTGAAAATTCT 57.238 37.500 33.86 6.57 34.60 2.40
2177 2378 6.761731 ATCGATCGATGTCTGAAAATTCTC 57.238 37.500 28.90 0.00 32.98 2.87
2178 2379 5.043903 TCGATCGATGTCTGAAAATTCTCC 58.956 41.667 15.15 0.00 0.00 3.71
2179 2380 4.085363 CGATCGATGTCTGAAAATTCTCCG 60.085 45.833 10.26 0.00 0.00 4.63
2180 2381 3.521560 TCGATGTCTGAAAATTCTCCGG 58.478 45.455 0.00 0.00 0.00 5.14
2181 2382 3.056107 TCGATGTCTGAAAATTCTCCGGT 60.056 43.478 0.00 0.00 0.00 5.28
2182 2383 4.158949 TCGATGTCTGAAAATTCTCCGGTA 59.841 41.667 0.00 0.00 0.00 4.02
2183 2384 5.050490 CGATGTCTGAAAATTCTCCGGTAT 58.950 41.667 0.00 0.00 0.00 2.73
2184 2385 5.050769 CGATGTCTGAAAATTCTCCGGTATG 60.051 44.000 0.00 0.00 0.00 2.39
2185 2386 3.938963 TGTCTGAAAATTCTCCGGTATGC 59.061 43.478 0.00 0.00 0.00 3.14
2186 2387 4.192317 GTCTGAAAATTCTCCGGTATGCT 58.808 43.478 0.00 0.00 0.00 3.79
2187 2388 5.105106 TGTCTGAAAATTCTCCGGTATGCTA 60.105 40.000 0.00 0.00 0.00 3.49
2188 2389 5.463724 GTCTGAAAATTCTCCGGTATGCTAG 59.536 44.000 0.00 0.00 0.00 3.42
2189 2390 4.127171 TGAAAATTCTCCGGTATGCTAGC 58.873 43.478 8.10 8.10 0.00 3.42
2190 2391 4.141711 TGAAAATTCTCCGGTATGCTAGCT 60.142 41.667 17.23 4.07 0.00 3.32
2191 2392 3.393089 AATTCTCCGGTATGCTAGCTG 57.607 47.619 17.23 0.58 0.00 4.24
2221 2425 2.476686 CGGTGTGCTGCTGACATTATTG 60.477 50.000 0.00 0.00 0.00 1.90
2230 2434 2.286067 GCTGACATTATTGAGCGCAGAC 60.286 50.000 11.47 0.51 0.00 3.51
2360 2564 2.032860 CTCACCAGGTAGCCATCGGG 62.033 65.000 0.00 0.00 37.18 5.14
2364 2568 0.469331 CCAGGTAGCCATCGGGTCTA 60.469 60.000 0.00 0.00 34.28 2.59
2366 2570 0.822532 AGGTAGCCATCGGGTCTACG 60.823 60.000 0.00 0.00 41.12 3.51
2383 2587 0.884704 ACGTTGTGGATGGCACTGTC 60.885 55.000 0.00 0.00 0.00 3.51
2421 2625 1.617850 CCTCTGCTGAACTCACTCTGT 59.382 52.381 0.00 0.00 0.00 3.41
2422 2626 2.352617 CCTCTGCTGAACTCACTCTGTC 60.353 54.545 0.00 0.00 0.00 3.51
2425 2629 1.342496 TGCTGAACTCACTCTGTCTGG 59.658 52.381 0.00 0.00 0.00 3.86
2426 2630 1.938926 GCTGAACTCACTCTGTCTGGC 60.939 57.143 0.00 0.00 0.00 4.85
2441 2656 2.281484 GGCGCAGTGGAGGAACAA 60.281 61.111 10.83 0.00 0.00 2.83
2466 2681 3.383223 CCCCTCTTCTTCATCTTCCTCT 58.617 50.000 0.00 0.00 0.00 3.69
2673 2888 1.605058 CGAGGGTGTCCATCTCGGTT 61.605 60.000 12.21 0.00 44.40 4.44
2676 2891 0.541863 GGGTGTCCATCTCGGTTCAT 59.458 55.000 0.00 0.00 35.57 2.57
3239 3454 2.045280 CGAAGCCGGAGATCAGGAT 58.955 57.895 5.05 0.00 32.68 3.24
3290 3505 1.736645 CCGGGCTTGCGTATATCCG 60.737 63.158 0.00 0.00 37.50 4.18
3312 3527 0.443869 GTGGCAGCACGATAACTGTG 59.556 55.000 0.00 0.00 40.32 3.66
3317 3532 2.926586 GCAGCACGATAACTGTGTGAGA 60.927 50.000 0.00 0.00 39.53 3.27
3369 3584 6.870971 TTTGTAATCTAGCGTTTTTGGTCT 57.129 33.333 0.00 0.00 0.00 3.85
3398 3613 7.989416 TGTTTTCGAATTTGTAGATTAGGGT 57.011 32.000 0.00 0.00 0.00 4.34
3453 3669 3.254892 CGCTGGTCTAAAGACTCTTTCC 58.745 50.000 7.33 4.36 44.20 3.13
3455 3671 3.997681 GCTGGTCTAAAGACTCTTTCCAC 59.002 47.826 7.33 5.91 44.20 4.02
3530 3749 3.132646 TGCAAGCTTGTGAGTGGATTTTT 59.867 39.130 26.55 0.00 0.00 1.94
3533 3752 4.311816 AGCTTGTGAGTGGATTTTTGTG 57.688 40.909 0.00 0.00 0.00 3.33
3642 4022 5.756195 TTCGCCATATTTTCTCTCAATGG 57.244 39.130 0.00 0.00 40.10 3.16
3643 4023 5.034852 TCGCCATATTTTCTCTCAATGGA 57.965 39.130 3.89 0.00 39.60 3.41
3644 4024 5.624159 TCGCCATATTTTCTCTCAATGGAT 58.376 37.500 3.89 0.00 39.60 3.41
3645 4025 6.768483 TCGCCATATTTTCTCTCAATGGATA 58.232 36.000 3.89 0.00 39.60 2.59
3646 4026 6.875726 TCGCCATATTTTCTCTCAATGGATAG 59.124 38.462 3.89 0.00 39.60 2.08
3744 4124 0.903236 GAGGACCTGACCCTAACCAC 59.097 60.000 0.00 0.00 33.36 4.16
3778 4158 9.616156 TCCTATTATTAATACGACCAAAAGCAA 57.384 29.630 0.00 0.00 0.00 3.91
3827 4207 4.599047 GAACGAGCGACATGAGTAATACT 58.401 43.478 0.00 0.00 0.00 2.12
3828 4208 4.212213 ACGAGCGACATGAGTAATACTC 57.788 45.455 13.20 13.20 45.26 2.59
3829 4209 3.003482 ACGAGCGACATGAGTAATACTCC 59.997 47.826 16.89 1.70 44.44 3.85
3830 4210 3.609644 CGAGCGACATGAGTAATACTCCC 60.610 52.174 16.89 4.12 44.44 4.30
3831 4211 3.567397 AGCGACATGAGTAATACTCCCT 58.433 45.455 16.89 2.74 44.44 4.20
3832 4212 3.570550 AGCGACATGAGTAATACTCCCTC 59.429 47.826 16.89 8.10 44.44 4.30
3833 4213 3.305471 GCGACATGAGTAATACTCCCTCC 60.305 52.174 16.89 4.43 44.44 4.30
3834 4214 3.889538 CGACATGAGTAATACTCCCTCCA 59.110 47.826 16.89 0.00 44.44 3.86
3835 4215 4.524714 CGACATGAGTAATACTCCCTCCAT 59.475 45.833 16.89 2.26 44.44 3.41
3836 4216 5.011125 CGACATGAGTAATACTCCCTCCATT 59.989 44.000 16.89 0.00 44.44 3.16
3837 4217 6.463049 CGACATGAGTAATACTCCCTCCATTT 60.463 42.308 16.89 0.00 44.44 2.32
3838 4218 6.831976 ACATGAGTAATACTCCCTCCATTTC 58.168 40.000 16.89 0.00 44.44 2.17
3839 4219 6.386927 ACATGAGTAATACTCCCTCCATTTCA 59.613 38.462 16.89 0.00 44.44 2.69
3840 4220 6.235231 TGAGTAATACTCCCTCCATTTCAC 57.765 41.667 16.89 0.00 44.44 3.18
3841 4221 5.724370 TGAGTAATACTCCCTCCATTTCACA 59.276 40.000 16.89 0.00 44.44 3.58
3842 4222 6.214615 TGAGTAATACTCCCTCCATTTCACAA 59.785 38.462 16.89 0.00 44.44 3.33
3843 4223 6.415573 AGTAATACTCCCTCCATTTCACAAC 58.584 40.000 0.00 0.00 0.00 3.32
3844 4224 2.185004 ACTCCCTCCATTTCACAACG 57.815 50.000 0.00 0.00 0.00 4.10
3845 4225 1.420138 ACTCCCTCCATTTCACAACGT 59.580 47.619 0.00 0.00 0.00 3.99
3846 4226 2.635915 ACTCCCTCCATTTCACAACGTA 59.364 45.455 0.00 0.00 0.00 3.57
3847 4227 3.262420 CTCCCTCCATTTCACAACGTAG 58.738 50.000 0.00 0.00 0.00 3.51
3849 4229 2.742053 CCCTCCATTTCACAACGTAGTG 59.258 50.000 0.00 0.00 45.00 2.74
3850 4230 2.159627 CCTCCATTTCACAACGTAGTGC 59.840 50.000 0.00 0.00 45.00 4.40
3851 4231 3.067106 CTCCATTTCACAACGTAGTGCT 58.933 45.455 0.00 0.00 45.00 4.40
3852 4232 3.472652 TCCATTTCACAACGTAGTGCTT 58.527 40.909 0.00 0.00 45.00 3.91
3853 4233 3.496884 TCCATTTCACAACGTAGTGCTTC 59.503 43.478 0.00 0.00 45.00 3.86
3854 4234 3.364964 CCATTTCACAACGTAGTGCTTCC 60.365 47.826 0.00 0.00 45.00 3.46
3855 4235 2.902705 TTCACAACGTAGTGCTTCCT 57.097 45.000 0.00 0.00 45.00 3.36
3856 4236 2.433868 TCACAACGTAGTGCTTCCTC 57.566 50.000 0.00 0.00 45.00 3.71
3857 4237 1.961394 TCACAACGTAGTGCTTCCTCT 59.039 47.619 0.00 0.00 45.00 3.69
3858 4238 3.151554 TCACAACGTAGTGCTTCCTCTA 58.848 45.455 0.00 0.00 45.00 2.43
3859 4239 3.762288 TCACAACGTAGTGCTTCCTCTAT 59.238 43.478 0.00 0.00 45.00 1.98
3860 4240 4.106197 CACAACGTAGTGCTTCCTCTATC 58.894 47.826 0.00 0.00 45.00 2.08
3861 4241 3.130693 ACAACGTAGTGCTTCCTCTATCC 59.869 47.826 0.00 0.00 45.00 2.59
3862 4242 2.308690 ACGTAGTGCTTCCTCTATCCC 58.691 52.381 0.00 0.00 42.51 3.85
3863 4243 1.614413 CGTAGTGCTTCCTCTATCCCC 59.386 57.143 0.00 0.00 0.00 4.81
3864 4244 1.614413 GTAGTGCTTCCTCTATCCCCG 59.386 57.143 0.00 0.00 0.00 5.73
3865 4245 0.032017 AGTGCTTCCTCTATCCCCGT 60.032 55.000 0.00 0.00 0.00 5.28
3866 4246 0.105039 GTGCTTCCTCTATCCCCGTG 59.895 60.000 0.00 0.00 0.00 4.94
3867 4247 1.069935 GCTTCCTCTATCCCCGTGC 59.930 63.158 0.00 0.00 0.00 5.34
3868 4248 1.403687 GCTTCCTCTATCCCCGTGCT 61.404 60.000 0.00 0.00 0.00 4.40
3869 4249 1.123928 CTTCCTCTATCCCCGTGCTT 58.876 55.000 0.00 0.00 0.00 3.91
3870 4250 1.069358 CTTCCTCTATCCCCGTGCTTC 59.931 57.143 0.00 0.00 0.00 3.86
3871 4251 0.032515 TCCTCTATCCCCGTGCTTCA 60.033 55.000 0.00 0.00 0.00 3.02
3872 4252 0.830648 CCTCTATCCCCGTGCTTCAA 59.169 55.000 0.00 0.00 0.00 2.69
3873 4253 1.417890 CCTCTATCCCCGTGCTTCAAT 59.582 52.381 0.00 0.00 0.00 2.57
3874 4254 2.158755 CCTCTATCCCCGTGCTTCAATT 60.159 50.000 0.00 0.00 0.00 2.32
3875 4255 3.545703 CTCTATCCCCGTGCTTCAATTT 58.454 45.455 0.00 0.00 0.00 1.82
3876 4256 3.947834 CTCTATCCCCGTGCTTCAATTTT 59.052 43.478 0.00 0.00 0.00 1.82
3877 4257 3.694072 TCTATCCCCGTGCTTCAATTTTG 59.306 43.478 0.00 0.00 0.00 2.44
3878 4258 1.988293 TCCCCGTGCTTCAATTTTGA 58.012 45.000 0.00 0.00 34.92 2.69
3879 4259 1.611491 TCCCCGTGCTTCAATTTTGAC 59.389 47.619 0.00 0.00 36.83 3.18
3880 4260 1.336795 CCCCGTGCTTCAATTTTGACC 60.337 52.381 0.00 0.00 36.83 4.02
3881 4261 1.665735 CCCGTGCTTCAATTTTGACCG 60.666 52.381 0.00 0.00 36.83 4.79
3882 4262 1.001815 CCGTGCTTCAATTTTGACCGT 60.002 47.619 0.00 0.00 36.83 4.83
3883 4263 2.224549 CCGTGCTTCAATTTTGACCGTA 59.775 45.455 0.00 0.00 36.83 4.02
3884 4264 3.304123 CCGTGCTTCAATTTTGACCGTAA 60.304 43.478 0.00 0.00 36.83 3.18
3885 4265 4.283678 CGTGCTTCAATTTTGACCGTAAA 58.716 39.130 0.00 0.00 36.83 2.01
3886 4266 4.915085 CGTGCTTCAATTTTGACCGTAAAT 59.085 37.500 0.00 0.00 36.83 1.40
3887 4267 5.401079 CGTGCTTCAATTTTGACCGTAAATT 59.599 36.000 0.00 0.00 36.83 1.82
3888 4268 6.074569 CGTGCTTCAATTTTGACCGTAAATTT 60.075 34.615 0.00 0.00 36.83 1.82
3889 4269 7.113684 CGTGCTTCAATTTTGACCGTAAATTTA 59.886 33.333 0.00 0.00 36.83 1.40
3890 4270 8.756864 GTGCTTCAATTTTGACCGTAAATTTAA 58.243 29.630 0.00 0.00 36.83 1.52
3891 4271 8.756864 TGCTTCAATTTTGACCGTAAATTTAAC 58.243 29.630 0.00 0.00 36.83 2.01
3892 4272 8.974408 GCTTCAATTTTGACCGTAAATTTAACT 58.026 29.630 0.00 0.00 36.83 2.24
3895 4275 9.896263 TCAATTTTGACCGTAAATTTAACTACC 57.104 29.630 0.00 0.00 34.01 3.18
3896 4276 9.680315 CAATTTTGACCGTAAATTTAACTACCA 57.320 29.630 0.00 0.00 34.01 3.25
3898 4278 9.902196 ATTTTGACCGTAAATTTAACTACCAAG 57.098 29.630 0.00 0.00 0.00 3.61
3899 4279 8.674263 TTTGACCGTAAATTTAACTACCAAGA 57.326 30.769 0.00 0.00 0.00 3.02
3900 4280 7.656707 TGACCGTAAATTTAACTACCAAGAC 57.343 36.000 0.00 0.00 0.00 3.01
3901 4281 6.650390 TGACCGTAAATTTAACTACCAAGACC 59.350 38.462 0.00 0.00 0.00 3.85
3902 4282 5.639082 ACCGTAAATTTAACTACCAAGACCG 59.361 40.000 0.00 0.00 0.00 4.79
3903 4283 5.868801 CCGTAAATTTAACTACCAAGACCGA 59.131 40.000 0.00 0.00 0.00 4.69
3904 4284 6.536224 CCGTAAATTTAACTACCAAGACCGAT 59.464 38.462 0.00 0.00 0.00 4.18
3905 4285 7.064966 CCGTAAATTTAACTACCAAGACCGATT 59.935 37.037 0.00 0.00 0.00 3.34
3906 4286 7.901377 CGTAAATTTAACTACCAAGACCGATTG 59.099 37.037 0.00 0.00 0.00 2.67
3907 4287 5.813080 ATTTAACTACCAAGACCGATTGC 57.187 39.130 0.00 0.00 0.00 3.56
3908 4288 1.722011 AACTACCAAGACCGATTGCG 58.278 50.000 0.00 0.00 37.24 4.85
3932 4312 5.409643 CGGGAGCAAAAGTTATATCAGTG 57.590 43.478 0.00 0.00 0.00 3.66
3933 4313 5.116180 CGGGAGCAAAAGTTATATCAGTGA 58.884 41.667 0.00 0.00 0.00 3.41
3934 4314 5.584649 CGGGAGCAAAAGTTATATCAGTGAA 59.415 40.000 0.00 0.00 0.00 3.18
3935 4315 6.260936 CGGGAGCAAAAGTTATATCAGTGAAT 59.739 38.462 0.00 0.00 0.00 2.57
3936 4316 7.201732 CGGGAGCAAAAGTTATATCAGTGAATT 60.202 37.037 0.00 0.00 0.00 2.17
3937 4317 8.131731 GGGAGCAAAAGTTATATCAGTGAATTC 58.868 37.037 0.00 0.00 0.00 2.17
3938 4318 7.852945 GGAGCAAAAGTTATATCAGTGAATTCG 59.147 37.037 0.00 0.00 0.00 3.34
3939 4319 8.268850 AGCAAAAGTTATATCAGTGAATTCGT 57.731 30.769 0.00 0.00 0.00 3.85
3940 4320 9.378551 AGCAAAAGTTATATCAGTGAATTCGTA 57.621 29.630 0.00 0.00 0.00 3.43
3945 4325 9.961265 AAGTTATATCAGTGAATTCGTATTCGA 57.039 29.630 9.79 2.59 42.55 3.71
3979 4359 9.628746 TTTTAATTATGTAACTTTTTCTCCCGC 57.371 29.630 0.00 0.00 0.00 6.13
3980 4360 5.830000 ATTATGTAACTTTTTCTCCCGCC 57.170 39.130 0.00 0.00 0.00 6.13
3981 4361 1.515081 TGTAACTTTTTCTCCCGCCG 58.485 50.000 0.00 0.00 0.00 6.46
3982 4362 0.167470 GTAACTTTTTCTCCCGCCGC 59.833 55.000 0.00 0.00 0.00 6.53
3983 4363 0.250381 TAACTTTTTCTCCCGCCGCA 60.250 50.000 0.00 0.00 0.00 5.69
3984 4364 1.515521 AACTTTTTCTCCCGCCGCAG 61.516 55.000 0.00 0.00 0.00 5.18
3985 4365 1.966451 CTTTTTCTCCCGCCGCAGT 60.966 57.895 0.00 0.00 0.00 4.40
3986 4366 1.912371 CTTTTTCTCCCGCCGCAGTC 61.912 60.000 0.00 0.00 0.00 3.51
3987 4367 4.735132 TTTCTCCCGCCGCAGTCG 62.735 66.667 0.00 0.00 0.00 4.18
3997 4377 3.147294 CGCAGTCGGTCTCGTTTG 58.853 61.111 0.00 0.00 37.69 2.93
3998 4378 1.660575 CGCAGTCGGTCTCGTTTGT 60.661 57.895 0.00 0.00 37.69 2.83
3999 4379 1.213094 CGCAGTCGGTCTCGTTTGTT 61.213 55.000 0.00 0.00 37.69 2.83
4000 4380 1.774639 GCAGTCGGTCTCGTTTGTTA 58.225 50.000 0.00 0.00 37.69 2.41
4001 4381 2.129607 GCAGTCGGTCTCGTTTGTTAA 58.870 47.619 0.00 0.00 37.69 2.01
4002 4382 2.540931 GCAGTCGGTCTCGTTTGTTAAA 59.459 45.455 0.00 0.00 37.69 1.52
4003 4383 3.185797 GCAGTCGGTCTCGTTTGTTAAAT 59.814 43.478 0.00 0.00 37.69 1.40
4004 4384 4.319261 GCAGTCGGTCTCGTTTGTTAAATT 60.319 41.667 0.00 0.00 37.69 1.82
4005 4385 5.744490 CAGTCGGTCTCGTTTGTTAAATTT 58.256 37.500 0.00 0.00 37.69 1.82
4006 4386 6.564499 GCAGTCGGTCTCGTTTGTTAAATTTA 60.564 38.462 0.00 0.00 37.69 1.40
4007 4387 7.515643 CAGTCGGTCTCGTTTGTTAAATTTAT 58.484 34.615 0.00 0.00 37.69 1.40
4008 4388 7.477422 CAGTCGGTCTCGTTTGTTAAATTTATG 59.523 37.037 0.00 0.00 37.69 1.90
4009 4389 6.739550 GTCGGTCTCGTTTGTTAAATTTATGG 59.260 38.462 0.00 0.00 37.69 2.74
4010 4390 6.427547 TCGGTCTCGTTTGTTAAATTTATGGT 59.572 34.615 0.00 0.00 37.69 3.55
4011 4391 6.739550 CGGTCTCGTTTGTTAAATTTATGGTC 59.260 38.462 0.00 0.00 0.00 4.02
4012 4392 7.571613 CGGTCTCGTTTGTTAAATTTATGGTCA 60.572 37.037 0.00 0.00 0.00 4.02
4013 4393 8.077386 GGTCTCGTTTGTTAAATTTATGGTCAA 58.923 33.333 0.00 1.18 0.00 3.18
4014 4394 9.453325 GTCTCGTTTGTTAAATTTATGGTCAAA 57.547 29.630 0.00 6.53 0.00 2.69
4015 4395 9.672086 TCTCGTTTGTTAAATTTATGGTCAAAG 57.328 29.630 0.00 4.73 0.00 2.77
4016 4396 9.458374 CTCGTTTGTTAAATTTATGGTCAAAGT 57.542 29.630 0.00 0.00 0.00 2.66
4017 4397 9.804758 TCGTTTGTTAAATTTATGGTCAAAGTT 57.195 25.926 0.00 0.00 31.36 2.66
4021 4401 9.453325 TTGTTAAATTTATGGTCAAAGTTCGAC 57.547 29.630 0.00 0.00 29.44 4.20
4027 4407 2.823628 GTCAAAGTTCGACCTCGGG 58.176 57.895 0.00 0.00 40.29 5.14
4028 4408 0.316204 GTCAAAGTTCGACCTCGGGA 59.684 55.000 0.00 0.00 40.29 5.14
4029 4409 1.042229 TCAAAGTTCGACCTCGGGAA 58.958 50.000 0.00 0.00 40.29 3.97
4030 4410 1.145803 CAAAGTTCGACCTCGGGAAC 58.854 55.000 0.00 0.00 42.15 3.62
4045 4425 3.778360 GAACCGCGGGCGCACTATA 62.778 63.158 31.76 0.00 42.06 1.31
4046 4426 3.159858 AACCGCGGGCGCACTATAT 62.160 57.895 31.76 0.00 42.06 0.86
4047 4427 2.357034 CCGCGGGCGCACTATATT 60.357 61.111 20.10 0.00 42.06 1.28
4048 4428 1.959226 CCGCGGGCGCACTATATTT 60.959 57.895 20.10 0.00 42.06 1.40
4049 4429 1.503818 CCGCGGGCGCACTATATTTT 61.504 55.000 20.10 0.00 42.06 1.82
4050 4430 0.384230 CGCGGGCGCACTATATTTTG 60.384 55.000 8.62 0.00 42.06 2.44
4051 4431 0.040425 GCGGGCGCACTATATTTTGG 60.040 55.000 8.62 0.00 41.49 3.28
4052 4432 1.588674 CGGGCGCACTATATTTTGGA 58.411 50.000 8.62 0.00 0.00 3.53
4053 4433 1.944024 CGGGCGCACTATATTTTGGAA 59.056 47.619 8.62 0.00 0.00 3.53
4054 4434 2.552315 CGGGCGCACTATATTTTGGAAT 59.448 45.455 8.62 0.00 0.00 3.01
4055 4435 3.609175 CGGGCGCACTATATTTTGGAATG 60.609 47.826 8.62 0.00 0.00 2.67
4056 4436 3.305335 GGGCGCACTATATTTTGGAATGG 60.305 47.826 10.83 0.00 0.00 3.16
4057 4437 3.568007 GGCGCACTATATTTTGGAATGGA 59.432 43.478 10.83 0.00 0.00 3.41
4058 4438 4.320494 GGCGCACTATATTTTGGAATGGAG 60.320 45.833 10.83 0.00 0.00 3.86
4059 4439 4.515191 GCGCACTATATTTTGGAATGGAGA 59.485 41.667 0.30 0.00 0.00 3.71
4060 4440 5.334414 GCGCACTATATTTTGGAATGGAGAG 60.334 44.000 0.30 0.00 0.00 3.20
4061 4441 5.991606 CGCACTATATTTTGGAATGGAGAGA 59.008 40.000 0.00 0.00 0.00 3.10
4062 4442 6.146837 CGCACTATATTTTGGAATGGAGAGAG 59.853 42.308 0.00 0.00 0.00 3.20
4063 4443 6.995091 GCACTATATTTTGGAATGGAGAGAGT 59.005 38.462 0.00 0.00 0.00 3.24
4064 4444 8.150945 GCACTATATTTTGGAATGGAGAGAGTA 58.849 37.037 0.00 0.00 0.00 2.59
4065 4445 9.482627 CACTATATTTTGGAATGGAGAGAGTAC 57.517 37.037 0.00 0.00 0.00 2.73
4205 4588 1.535462 GGCTGTACTGTGCGTTGAATT 59.465 47.619 1.46 0.00 0.00 2.17
4217 4600 6.370593 TGTGCGTTGAATTGAAGAAGATAAC 58.629 36.000 0.00 0.00 0.00 1.89
4237 4620 2.849943 ACCCCTCCATACAAGCACATAA 59.150 45.455 0.00 0.00 0.00 1.90
4242 4625 5.185454 CCTCCATACAAGCACATAACTCAA 58.815 41.667 0.00 0.00 0.00 3.02
4257 4640 1.361668 CTCAACCTCCAACGCATCCG 61.362 60.000 0.00 0.00 41.14 4.18
4396 4779 2.282180 GCCTTGGCTCGGTTTGGA 60.282 61.111 4.11 0.00 0.00 3.53
4401 4784 1.701031 TTGGCTCGGTTTGGACCAGA 61.701 55.000 0.00 0.00 46.91 3.86
4402 4785 1.072505 GGCTCGGTTTGGACCAGAA 59.927 57.895 0.00 0.00 46.91 3.02
4403 4786 0.322546 GGCTCGGTTTGGACCAGAAT 60.323 55.000 0.00 0.00 46.91 2.40
4404 4787 1.087501 GCTCGGTTTGGACCAGAATC 58.912 55.000 0.00 0.00 46.91 2.52
4405 4788 1.339151 GCTCGGTTTGGACCAGAATCT 60.339 52.381 0.00 0.00 46.91 2.40
4406 4789 2.876079 GCTCGGTTTGGACCAGAATCTT 60.876 50.000 0.00 0.00 46.91 2.40
4407 4790 3.003480 CTCGGTTTGGACCAGAATCTTC 58.997 50.000 0.00 0.00 46.91 2.87
4408 4791 2.637872 TCGGTTTGGACCAGAATCTTCT 59.362 45.455 0.00 0.00 46.91 2.85
4409 4792 3.003480 CGGTTTGGACCAGAATCTTCTC 58.997 50.000 0.00 0.00 46.91 2.87
4410 4793 3.557054 CGGTTTGGACCAGAATCTTCTCA 60.557 47.826 0.00 0.00 46.91 3.27
4411 4794 4.398319 GGTTTGGACCAGAATCTTCTCAA 58.602 43.478 0.00 0.00 45.77 3.02
4412 4795 5.012893 GGTTTGGACCAGAATCTTCTCAAT 58.987 41.667 0.00 0.00 45.77 2.57
4413 4796 5.105997 GGTTTGGACCAGAATCTTCTCAATG 60.106 44.000 0.00 0.00 45.77 2.82
4455 4838 2.196295 TGTACCAACAAAAGCGCAAC 57.804 45.000 11.47 0.00 30.91 4.17
4456 4839 1.117234 GTACCAACAAAAGCGCAACG 58.883 50.000 11.47 0.00 0.00 4.10
4457 4840 0.733729 TACCAACAAAAGCGCAACGT 59.266 45.000 11.47 0.00 0.00 3.99
4458 4841 0.109039 ACCAACAAAAGCGCAACGTT 60.109 45.000 11.47 4.25 0.00 3.99
4459 4842 0.297230 CCAACAAAAGCGCAACGTTG 59.703 50.000 23.90 23.90 37.33 4.10
4460 4843 1.263776 CAACAAAAGCGCAACGTTGA 58.736 45.000 31.62 0.00 39.39 3.18
4461 4844 1.651138 CAACAAAAGCGCAACGTTGAA 59.349 42.857 31.62 0.00 39.39 2.69
4462 4845 1.983972 ACAAAAGCGCAACGTTGAAA 58.016 40.000 31.62 0.00 0.00 2.69
4463 4846 1.651631 ACAAAAGCGCAACGTTGAAAC 59.348 42.857 31.62 18.36 0.00 2.78
4464 4847 1.651138 CAAAAGCGCAACGTTGAAACA 59.349 42.857 31.62 0.00 0.00 2.83
4465 4848 2.202295 AAAGCGCAACGTTGAAACAT 57.798 40.000 31.62 11.13 0.00 2.71
4466 4849 1.476074 AAGCGCAACGTTGAAACATG 58.524 45.000 31.62 13.32 0.00 3.21
4467 4850 0.380378 AGCGCAACGTTGAAACATGT 59.620 45.000 31.62 5.28 0.00 3.21
4468 4851 1.196200 GCGCAACGTTGAAACATGTT 58.804 45.000 31.62 4.92 0.00 2.71
4469 4852 1.586123 GCGCAACGTTGAAACATGTTT 59.414 42.857 31.62 23.49 35.14 2.83
4470 4853 2.028643 GCGCAACGTTGAAACATGTTTT 59.971 40.909 31.62 8.91 32.11 2.43
4471 4854 3.582364 CGCAACGTTGAAACATGTTTTG 58.418 40.909 31.62 17.40 32.11 2.44
4472 4855 3.301906 CGCAACGTTGAAACATGTTTTGA 59.698 39.130 31.62 13.27 32.11 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 4.572985 TCAGTTTTTGTGATCTTGCAGG 57.427 40.909 0.00 0.00 0.00 4.85
105 106 4.462834 TCCTTCGACTTGTATGTCATCACT 59.537 41.667 0.00 0.00 36.82 3.41
112 113 4.383118 CCCTTCATCCTTCGACTTGTATGT 60.383 45.833 0.00 0.00 0.00 2.29
129 130 4.257654 TTGGTTCCGCGCCCTTCA 62.258 61.111 0.00 0.00 0.00 3.02
130 131 3.733960 GTTGGTTCCGCGCCCTTC 61.734 66.667 0.00 0.00 0.00 3.46
138 139 0.319211 TCTACTGCGTGTTGGTTCCG 60.319 55.000 0.00 0.00 0.00 4.30
149 150 3.119291 CTGGTTAGCTTGATCTACTGCG 58.881 50.000 0.00 0.00 0.00 5.18
208 209 1.614241 ATCCTGCCGTACCTCCACAC 61.614 60.000 0.00 0.00 0.00 3.82
212 213 0.755698 TCTGATCCTGCCGTACCTCC 60.756 60.000 0.00 0.00 0.00 4.30
263 264 1.227002 GTAGTAGCCTGGCGCAGAC 60.227 63.158 13.96 10.20 41.38 3.51
284 285 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
298 299 4.785453 GGGTTGCAGGGCGAGGAG 62.785 72.222 0.00 0.00 0.00 3.69
304 305 3.590466 ATCTGGTGGGTTGCAGGGC 62.590 63.158 0.00 0.00 0.00 5.19
305 306 0.967380 GAATCTGGTGGGTTGCAGGG 60.967 60.000 0.00 0.00 0.00 4.45
306 307 0.967380 GGAATCTGGTGGGTTGCAGG 60.967 60.000 0.00 0.00 0.00 4.85
337 338 1.019278 TCGGCGAGGCAGATTTTGAC 61.019 55.000 4.99 0.00 33.75 3.18
429 430 4.348495 GGGTGGAGGGAGGGGTGA 62.348 72.222 0.00 0.00 0.00 4.02
487 488 4.383118 CCAATTCCACAGATTCGAGTAGGT 60.383 45.833 0.00 0.00 0.00 3.08
519 520 1.598882 TTAATGTGCGCCAACTGACA 58.401 45.000 4.18 0.61 0.00 3.58
522 523 4.031652 GCTTTAATTAATGTGCGCCAACTG 59.968 41.667 4.18 0.00 0.00 3.16
526 527 2.757868 AGGCTTTAATTAATGTGCGCCA 59.242 40.909 4.18 2.31 38.71 5.69
533 534 6.040391 TGGGGATTTCGAGGCTTTAATTAATG 59.960 38.462 0.00 2.78 0.00 1.90
538 539 3.662759 TGGGGATTTCGAGGCTTTAAT 57.337 42.857 0.00 0.00 0.00 1.40
539 540 3.443145 TTGGGGATTTCGAGGCTTTAA 57.557 42.857 0.00 0.00 0.00 1.52
540 541 3.551846 GATTGGGGATTTCGAGGCTTTA 58.448 45.455 0.00 0.00 0.00 1.85
541 542 2.379005 GATTGGGGATTTCGAGGCTTT 58.621 47.619 0.00 0.00 0.00 3.51
768 776 0.105658 CTCCTCCCAATCGGTCCCTA 60.106 60.000 0.00 0.00 0.00 3.53
769 777 1.383248 CTCCTCCCAATCGGTCCCT 60.383 63.158 0.00 0.00 0.00 4.20
770 778 2.444256 CCTCCTCCCAATCGGTCCC 61.444 68.421 0.00 0.00 0.00 4.46
771 779 1.382695 TCCTCCTCCCAATCGGTCC 60.383 63.158 0.00 0.00 0.00 4.46
772 780 0.397254 TCTCCTCCTCCCAATCGGTC 60.397 60.000 0.00 0.00 0.00 4.79
773 781 0.688087 GTCTCCTCCTCCCAATCGGT 60.688 60.000 0.00 0.00 0.00 4.69
905 913 1.574147 CGTGATAAACGCGCACACG 60.574 57.895 21.47 21.47 46.99 4.49
1077 1085 1.729472 CGCCTTCTATGCCGTCGATAG 60.729 57.143 0.00 0.00 0.00 2.08
1078 1086 0.240145 CGCCTTCTATGCCGTCGATA 59.760 55.000 0.00 0.00 0.00 2.92
1121 1135 5.917462 TGTCAACACAAGAGAAAGAGATCA 58.083 37.500 0.00 0.00 0.00 2.92
1122 1136 7.432350 AATGTCAACACAAGAGAAAGAGATC 57.568 36.000 0.00 0.00 35.64 2.75
1123 1137 7.814264 AAATGTCAACACAAGAGAAAGAGAT 57.186 32.000 0.00 0.00 35.64 2.75
1125 1139 7.756722 ACAAAAATGTCAACACAAGAGAAAGAG 59.243 33.333 0.00 0.00 35.64 2.85
1127 1141 7.816945 ACAAAAATGTCAACACAAGAGAAAG 57.183 32.000 0.00 0.00 35.64 2.62
1128 1142 8.600449 AAACAAAAATGTCAACACAAGAGAAA 57.400 26.923 0.00 0.00 35.64 2.52
1129 1143 8.494347 CAAAACAAAAATGTCAACACAAGAGAA 58.506 29.630 0.00 0.00 35.64 2.87
1135 1157 6.203530 TCAAGCAAAACAAAAATGTCAACACA 59.796 30.769 0.00 0.00 36.78 3.72
1141 1163 7.121272 CACAGATCAAGCAAAACAAAAATGTC 58.879 34.615 0.00 0.00 0.00 3.06
1158 1180 4.080413 TCCAATCTACATTGCCACAGATCA 60.080 41.667 0.00 0.00 38.53 2.92
1174 1200 4.037684 GCAAAGCTAGCATCATTCCAATCT 59.962 41.667 18.83 0.00 0.00 2.40
1178 1204 2.686405 CAGCAAAGCTAGCATCATTCCA 59.314 45.455 18.83 0.00 36.40 3.53
1179 1205 2.543238 GCAGCAAAGCTAGCATCATTCC 60.543 50.000 18.83 0.00 36.40 3.01
1180 1206 2.543238 GGCAGCAAAGCTAGCATCATTC 60.543 50.000 18.83 0.56 36.40 2.67
1181 1207 1.407979 GGCAGCAAAGCTAGCATCATT 59.592 47.619 18.83 3.36 36.40 2.57
1182 1208 1.030457 GGCAGCAAAGCTAGCATCAT 58.970 50.000 18.83 0.00 36.40 2.45
1192 1218 2.987413 TGATGTTTACGGCAGCAAAG 57.013 45.000 0.00 0.00 28.71 2.77
1246 1272 5.444663 TCACCTATCGATGAGATGACAAG 57.555 43.478 8.54 0.00 40.40 3.16
1258 1285 2.089201 TCTGCGTTCTTCACCTATCGA 58.911 47.619 0.00 0.00 0.00 3.59
1272 1299 4.431131 CCATTGCCCCCTCTGCGT 62.431 66.667 0.00 0.00 0.00 5.24
1276 1303 2.204448 TTCCCCATTGCCCCCTCT 60.204 61.111 0.00 0.00 0.00 3.69
1321 1349 2.818132 GACGGGCTCAGGATCCTG 59.182 66.667 32.60 32.60 44.86 3.86
1388 1416 3.165058 TCGATGAAGACGGGAGAATTG 57.835 47.619 0.00 0.00 0.00 2.32
1451 1498 1.884926 GCCGGCTTCTTGGATCGAG 60.885 63.158 22.15 0.00 0.00 4.04
1609 1677 4.099170 CTCGCTCGTCGTTCCGGT 62.099 66.667 0.00 0.00 39.67 5.28
1629 1697 2.296190 GACTTGGAACCCACCATTGTTC 59.704 50.000 0.00 0.00 39.82 3.18
1633 1701 0.893727 GCGACTTGGAACCCACCATT 60.894 55.000 0.00 0.00 39.82 3.16
1641 1709 3.016474 GAGCGCTGCGACTTGGAAC 62.016 63.158 28.07 4.97 0.00 3.62
1642 1710 2.738521 GAGCGCTGCGACTTGGAA 60.739 61.111 28.07 0.00 0.00 3.53
1728 1802 4.416738 GCGGCAAGCTCCTCCCTT 62.417 66.667 0.00 0.00 44.04 3.95
1807 2002 8.853345 CAAGTTTTCAACATGTTAGACATATGC 58.147 33.333 11.53 0.00 36.53 3.14
1808 2003 9.345517 CCAAGTTTTCAACATGTTAGACATATG 57.654 33.333 11.53 0.00 36.53 1.78
1813 2014 7.757624 TGTTTCCAAGTTTTCAACATGTTAGAC 59.242 33.333 11.53 7.61 0.00 2.59
1848 2049 0.981943 CCCCTTCCTTACCTGAACGT 59.018 55.000 0.00 0.00 0.00 3.99
2035 2236 0.752054 TTTTGTCAGGCCCTTGCTTG 59.248 50.000 0.00 0.00 45.36 4.01
2086 2287 7.892227 CGTTACGAACTAGTACGATAGATGATC 59.108 40.741 9.06 0.00 41.38 2.92
2087 2288 7.596621 TCGTTACGAACTAGTACGATAGATGAT 59.403 37.037 12.57 0.00 33.94 2.45
2088 2289 6.918022 TCGTTACGAACTAGTACGATAGATGA 59.082 38.462 12.57 0.00 33.94 2.92
2089 2290 7.098503 TCGTTACGAACTAGTACGATAGATG 57.901 40.000 12.57 0.00 33.94 2.90
2090 2291 7.881643 ATCGTTACGAACTAGTACGATAGAT 57.118 36.000 22.71 9.35 39.99 1.98
2091 2292 7.649705 AGAATCGTTACGAACTAGTACGATAGA 59.350 37.037 23.74 8.54 39.99 1.98
2092 2293 7.782242 AGAATCGTTACGAACTAGTACGATAG 58.218 38.462 23.74 1.71 39.99 2.08
2093 2294 7.700322 AGAATCGTTACGAACTAGTACGATA 57.300 36.000 23.74 5.35 39.99 2.92
2094 2295 6.595772 AGAATCGTTACGAACTAGTACGAT 57.404 37.500 19.85 19.85 39.99 3.73
2095 2296 6.128553 ACAAGAATCGTTACGAACTAGTACGA 60.129 38.462 17.47 17.47 39.99 3.43
2096 2297 6.017933 ACAAGAATCGTTACGAACTAGTACG 58.982 40.000 12.53 8.50 39.99 3.67
2097 2298 7.535258 TGAACAAGAATCGTTACGAACTAGTAC 59.465 37.037 12.53 8.05 39.99 2.73
2098 2299 7.584108 TGAACAAGAATCGTTACGAACTAGTA 58.416 34.615 12.53 0.00 39.99 1.82
2099 2300 6.441274 TGAACAAGAATCGTTACGAACTAGT 58.559 36.000 12.53 4.57 39.99 2.57
2100 2301 6.922980 TGAACAAGAATCGTTACGAACTAG 57.077 37.500 12.53 3.93 39.99 2.57
2101 2302 9.016623 CATATGAACAAGAATCGTTACGAACTA 57.983 33.333 12.53 0.00 39.99 2.24
2102 2303 7.010183 CCATATGAACAAGAATCGTTACGAACT 59.990 37.037 12.53 11.45 39.99 3.01
2103 2304 7.117454 CCATATGAACAAGAATCGTTACGAAC 58.883 38.462 12.53 9.25 39.99 3.95
2104 2305 6.814644 ACCATATGAACAAGAATCGTTACGAA 59.185 34.615 12.53 0.00 39.99 3.85
2105 2306 6.334989 ACCATATGAACAAGAATCGTTACGA 58.665 36.000 10.62 10.62 41.13 3.43
2106 2307 6.583912 ACCATATGAACAAGAATCGTTACG 57.416 37.500 3.65 0.00 0.00 3.18
2107 2308 7.433131 TCGTACCATATGAACAAGAATCGTTAC 59.567 37.037 3.65 0.00 0.00 2.50
2108 2309 7.433131 GTCGTACCATATGAACAAGAATCGTTA 59.567 37.037 3.65 0.00 0.00 3.18
2109 2310 6.255020 GTCGTACCATATGAACAAGAATCGTT 59.745 38.462 3.65 0.00 0.00 3.85
2110 2311 5.747197 GTCGTACCATATGAACAAGAATCGT 59.253 40.000 3.65 0.00 0.00 3.73
2111 2312 5.108368 CGTCGTACCATATGAACAAGAATCG 60.108 44.000 3.65 0.00 0.00 3.34
2112 2313 5.975344 TCGTCGTACCATATGAACAAGAATC 59.025 40.000 3.65 0.00 0.00 2.52
2113 2314 5.898174 TCGTCGTACCATATGAACAAGAAT 58.102 37.500 3.65 0.00 0.00 2.40
2114 2315 5.313520 TCGTCGTACCATATGAACAAGAA 57.686 39.130 3.65 0.00 0.00 2.52
2115 2316 4.968812 TCGTCGTACCATATGAACAAGA 57.031 40.909 3.65 0.00 0.00 3.02
2116 2317 5.173312 GTGATCGTCGTACCATATGAACAAG 59.827 44.000 3.65 0.00 0.00 3.16
2117 2318 5.038683 GTGATCGTCGTACCATATGAACAA 58.961 41.667 3.65 0.00 0.00 2.83
2118 2319 4.603985 GTGATCGTCGTACCATATGAACA 58.396 43.478 3.65 0.00 0.00 3.18
2119 2320 3.662645 CGTGATCGTCGTACCATATGAAC 59.337 47.826 3.65 1.19 0.00 3.18
2120 2321 3.560896 TCGTGATCGTCGTACCATATGAA 59.439 43.478 3.65 0.00 38.33 2.57
2121 2322 3.059393 GTCGTGATCGTCGTACCATATGA 60.059 47.826 3.65 0.00 38.33 2.15
2122 2323 3.059120 AGTCGTGATCGTCGTACCATATG 60.059 47.826 9.31 0.00 38.33 1.78
2123 2324 3.136763 AGTCGTGATCGTCGTACCATAT 58.863 45.455 9.31 0.00 38.33 1.78
2124 2325 2.554142 AGTCGTGATCGTCGTACCATA 58.446 47.619 9.31 0.00 38.33 2.74
2125 2326 1.376543 AGTCGTGATCGTCGTACCAT 58.623 50.000 9.31 0.00 38.33 3.55
2126 2327 1.135888 CAAGTCGTGATCGTCGTACCA 60.136 52.381 9.31 0.00 38.33 3.25
2127 2328 1.531912 CAAGTCGTGATCGTCGTACC 58.468 55.000 9.31 1.49 38.33 3.34
2128 2329 0.905839 GCAAGTCGTGATCGTCGTAC 59.094 55.000 9.31 7.09 38.33 3.67
2129 2330 0.179181 GGCAAGTCGTGATCGTCGTA 60.179 55.000 9.31 0.00 38.33 3.43
2130 2331 1.443872 GGCAAGTCGTGATCGTCGT 60.444 57.895 9.31 0.00 38.33 4.34
2131 2332 2.497092 CGGCAAGTCGTGATCGTCG 61.497 63.158 4.14 4.14 38.33 5.12
2132 2333 0.525668 ATCGGCAAGTCGTGATCGTC 60.526 55.000 0.00 0.00 38.33 4.20
2133 2334 0.525668 GATCGGCAAGTCGTGATCGT 60.526 55.000 0.00 0.00 38.33 3.73
2134 2335 2.208074 GATCGGCAAGTCGTGATCG 58.792 57.895 0.00 0.00 38.55 3.69
2135 2336 0.248498 TCGATCGGCAAGTCGTGATC 60.248 55.000 16.41 0.00 38.85 2.92
2136 2337 0.385751 ATCGATCGGCAAGTCGTGAT 59.614 50.000 16.41 0.00 38.85 3.06
2137 2338 0.248498 GATCGATCGGCAAGTCGTGA 60.248 55.000 16.41 0.00 38.85 4.35
2138 2339 1.532343 CGATCGATCGGCAAGTCGTG 61.532 60.000 34.54 7.49 45.93 4.35
2139 2340 1.298413 CGATCGATCGGCAAGTCGT 60.298 57.895 34.54 0.00 45.93 4.34
2140 2341 3.515687 CGATCGATCGGCAAGTCG 58.484 61.111 34.54 12.83 45.93 4.18
2153 2354 6.128956 GGAGAATTTTCAGACATCGATCGATC 60.129 42.308 27.20 18.21 31.62 3.69
2154 2355 5.694006 GGAGAATTTTCAGACATCGATCGAT 59.306 40.000 24.60 24.60 34.81 3.59
2155 2356 5.043903 GGAGAATTTTCAGACATCGATCGA 58.956 41.667 21.86 21.86 0.00 3.59
2156 2357 4.085363 CGGAGAATTTTCAGACATCGATCG 60.085 45.833 9.36 9.36 0.00 3.69
2157 2358 4.210120 CCGGAGAATTTTCAGACATCGATC 59.790 45.833 0.00 0.00 0.00 3.69
2158 2359 4.122776 CCGGAGAATTTTCAGACATCGAT 58.877 43.478 0.00 0.00 0.00 3.59
2159 2360 3.056107 ACCGGAGAATTTTCAGACATCGA 60.056 43.478 9.46 0.00 0.00 3.59
2160 2361 3.262420 ACCGGAGAATTTTCAGACATCG 58.738 45.455 9.46 0.00 0.00 3.84
2161 2362 5.277538 GCATACCGGAGAATTTTCAGACATC 60.278 44.000 9.46 0.00 0.00 3.06
2162 2363 4.576463 GCATACCGGAGAATTTTCAGACAT 59.424 41.667 9.46 0.00 0.00 3.06
2163 2364 3.938963 GCATACCGGAGAATTTTCAGACA 59.061 43.478 9.46 0.00 0.00 3.41
2164 2365 4.192317 AGCATACCGGAGAATTTTCAGAC 58.808 43.478 9.46 0.00 0.00 3.51
2165 2366 4.487714 AGCATACCGGAGAATTTTCAGA 57.512 40.909 9.46 0.00 0.00 3.27
2166 2367 4.212214 GCTAGCATACCGGAGAATTTTCAG 59.788 45.833 9.46 0.00 0.00 3.02
2167 2368 4.127171 GCTAGCATACCGGAGAATTTTCA 58.873 43.478 9.46 0.00 0.00 2.69
2168 2369 4.212214 CAGCTAGCATACCGGAGAATTTTC 59.788 45.833 18.83 0.00 0.00 2.29
2169 2370 4.130118 CAGCTAGCATACCGGAGAATTTT 58.870 43.478 18.83 0.00 0.00 1.82
2170 2371 3.388024 TCAGCTAGCATACCGGAGAATTT 59.612 43.478 18.83 0.00 0.00 1.82
2171 2372 2.965831 TCAGCTAGCATACCGGAGAATT 59.034 45.455 18.83 0.00 0.00 2.17
2172 2373 2.598565 TCAGCTAGCATACCGGAGAAT 58.401 47.619 18.83 0.00 0.00 2.40
2173 2374 2.067365 TCAGCTAGCATACCGGAGAA 57.933 50.000 18.83 0.00 0.00 2.87
2174 2375 1.681793 GTTCAGCTAGCATACCGGAGA 59.318 52.381 18.83 0.00 0.00 3.71
2175 2376 1.269831 GGTTCAGCTAGCATACCGGAG 60.270 57.143 18.83 0.00 0.00 4.63
2176 2377 0.750850 GGTTCAGCTAGCATACCGGA 59.249 55.000 18.83 1.41 0.00 5.14
2177 2378 0.753262 AGGTTCAGCTAGCATACCGG 59.247 55.000 18.83 0.00 34.09 5.28
2178 2379 1.409064 TCAGGTTCAGCTAGCATACCG 59.591 52.381 18.83 15.16 34.09 4.02
2179 2380 2.483889 GGTCAGGTTCAGCTAGCATACC 60.484 54.545 18.83 19.25 0.00 2.73
2180 2381 2.799917 CGGTCAGGTTCAGCTAGCATAC 60.800 54.545 18.83 11.11 0.00 2.39
2181 2382 1.409064 CGGTCAGGTTCAGCTAGCATA 59.591 52.381 18.83 0.43 0.00 3.14
2182 2383 0.176680 CGGTCAGGTTCAGCTAGCAT 59.823 55.000 18.83 0.00 0.00 3.79
2183 2384 1.591703 CGGTCAGGTTCAGCTAGCA 59.408 57.895 18.83 0.00 0.00 3.49
2184 2385 1.153549 CCGGTCAGGTTCAGCTAGC 60.154 63.158 6.62 6.62 34.51 3.42
2221 2425 1.005630 ACTTCACCAGTCTGCGCTC 60.006 57.895 9.73 0.00 0.00 5.03
2230 2434 1.625315 TGTGATCCCAGACTTCACCAG 59.375 52.381 3.20 0.00 39.17 4.00
2330 2534 1.115467 CCTGGTGAGAGAAGGCGTAT 58.885 55.000 0.00 0.00 0.00 3.06
2360 2564 1.076332 GTGCCATCCACAACGTAGAC 58.924 55.000 0.00 0.00 44.06 2.59
2421 2625 2.922503 TTCCTCCACTGCGCCAGA 60.923 61.111 4.18 0.00 35.18 3.86
2422 2626 2.743928 GTTCCTCCACTGCGCCAG 60.744 66.667 4.18 4.99 37.52 4.85
2425 2629 1.294659 CTCTTGTTCCTCCACTGCGC 61.295 60.000 0.00 0.00 0.00 6.09
2426 2630 1.294659 GCTCTTGTTCCTCCACTGCG 61.295 60.000 0.00 0.00 0.00 5.18
2441 2656 2.566708 AGATGAAGAAGAGGGGCTCT 57.433 50.000 0.00 0.00 43.37 4.09
2466 2681 0.251832 GTGTCACTCTCCCTCTCCCA 60.252 60.000 0.00 0.00 0.00 4.37
2673 2888 1.145156 CGGCGTGGTGGGAATATGA 59.855 57.895 0.00 0.00 0.00 2.15
2676 2891 2.580276 GTCGGCGTGGTGGGAATA 59.420 61.111 6.85 0.00 0.00 1.75
3165 3380 1.938861 CGACGACACCCCTTGTTTG 59.061 57.895 0.00 0.00 39.17 2.93
3290 3505 1.021390 AGTTATCGTGCTGCCACTGC 61.021 55.000 0.00 0.00 39.86 4.40
3292 3507 0.321671 ACAGTTATCGTGCTGCCACT 59.678 50.000 0.00 0.00 39.86 4.00
3312 3527 9.346725 CTAGGCAACAAAATAAGAAAATCTCAC 57.653 33.333 0.00 0.00 41.41 3.51
3317 3532 9.191995 CGAAACTAGGCAACAAAATAAGAAAAT 57.808 29.630 0.00 0.00 41.41 1.82
3390 3605 6.505044 AAATTTGTACCGAACACCCTAATC 57.495 37.500 0.00 0.00 38.00 1.75
3396 3611 8.077386 TCAAAAGATAAATTTGTACCGAACACC 58.923 33.333 0.00 0.00 38.00 4.16
3398 3613 8.842280 ACTCAAAAGATAAATTTGTACCGAACA 58.158 29.630 0.00 0.00 38.57 3.18
3530 3749 1.177895 ATCCATGCACGTTTGGCACA 61.178 50.000 0.64 0.00 45.23 4.57
3533 3752 1.139520 GGATCCATGCACGTTTGGC 59.860 57.895 6.95 0.00 32.80 4.52
3613 3993 8.256611 TGAGAGAAAATATGGCGAAATATAGC 57.743 34.615 0.00 0.00 0.00 2.97
3654 4034 5.361571 TGAGTAATATAAGTGTTGAGCCCGA 59.638 40.000 0.00 0.00 0.00 5.14
3778 4158 5.941948 AATAAAGCAAGCGACAAGTTAGT 57.058 34.783 0.00 0.00 0.00 2.24
3827 4207 2.635915 ACTACGTTGTGAAATGGAGGGA 59.364 45.455 0.73 0.00 0.00 4.20
3828 4208 2.742053 CACTACGTTGTGAAATGGAGGG 59.258 50.000 23.14 0.00 40.12 4.30
3829 4209 2.159627 GCACTACGTTGTGAAATGGAGG 59.840 50.000 29.93 4.37 40.12 4.30
3830 4210 3.067106 AGCACTACGTTGTGAAATGGAG 58.933 45.455 29.93 3.73 40.12 3.86
3831 4211 3.120321 AGCACTACGTTGTGAAATGGA 57.880 42.857 29.93 0.00 40.12 3.41
3832 4212 3.364964 GGAAGCACTACGTTGTGAAATGG 60.365 47.826 29.93 6.44 40.12 3.16
3833 4213 3.498397 AGGAAGCACTACGTTGTGAAATG 59.502 43.478 29.93 7.20 40.12 2.32
3834 4214 3.740115 AGGAAGCACTACGTTGTGAAAT 58.260 40.909 29.93 16.18 40.12 2.17
3835 4215 3.128349 GAGGAAGCACTACGTTGTGAAA 58.872 45.455 29.93 0.00 40.12 2.69
3836 4216 2.364324 AGAGGAAGCACTACGTTGTGAA 59.636 45.455 29.93 0.00 40.12 3.18
3837 4217 1.961394 AGAGGAAGCACTACGTTGTGA 59.039 47.619 29.93 0.00 40.12 3.58
3838 4218 2.440539 AGAGGAAGCACTACGTTGTG 57.559 50.000 23.20 23.20 40.62 3.33
3839 4219 3.130693 GGATAGAGGAAGCACTACGTTGT 59.869 47.826 0.00 0.00 0.00 3.32
3840 4220 3.491104 GGGATAGAGGAAGCACTACGTTG 60.491 52.174 0.00 0.00 0.00 4.10
3841 4221 2.694109 GGGATAGAGGAAGCACTACGTT 59.306 50.000 0.00 0.00 0.00 3.99
3842 4222 2.308690 GGGATAGAGGAAGCACTACGT 58.691 52.381 0.00 0.00 0.00 3.57
3843 4223 1.614413 GGGGATAGAGGAAGCACTACG 59.386 57.143 0.00 0.00 0.00 3.51
3844 4224 1.614413 CGGGGATAGAGGAAGCACTAC 59.386 57.143 0.00 0.00 0.00 2.73
3845 4225 1.217183 ACGGGGATAGAGGAAGCACTA 59.783 52.381 0.00 0.00 0.00 2.74
3846 4226 0.032017 ACGGGGATAGAGGAAGCACT 60.032 55.000 0.00 0.00 0.00 4.40
3847 4227 0.105039 CACGGGGATAGAGGAAGCAC 59.895 60.000 0.00 0.00 0.00 4.40
3848 4228 1.686325 GCACGGGGATAGAGGAAGCA 61.686 60.000 0.00 0.00 0.00 3.91
3849 4229 1.069935 GCACGGGGATAGAGGAAGC 59.930 63.158 0.00 0.00 0.00 3.86
3850 4230 1.069358 GAAGCACGGGGATAGAGGAAG 59.931 57.143 0.00 0.00 0.00 3.46
3851 4231 1.120530 GAAGCACGGGGATAGAGGAA 58.879 55.000 0.00 0.00 0.00 3.36
3852 4232 0.032515 TGAAGCACGGGGATAGAGGA 60.033 55.000 0.00 0.00 0.00 3.71
3853 4233 0.830648 TTGAAGCACGGGGATAGAGG 59.169 55.000 0.00 0.00 0.00 3.69
3854 4234 2.918712 ATTGAAGCACGGGGATAGAG 57.081 50.000 0.00 0.00 0.00 2.43
3855 4235 3.644966 AAATTGAAGCACGGGGATAGA 57.355 42.857 0.00 0.00 0.00 1.98
3856 4236 3.694072 TCAAAATTGAAGCACGGGGATAG 59.306 43.478 0.00 0.00 33.55 2.08
3857 4237 3.442273 GTCAAAATTGAAGCACGGGGATA 59.558 43.478 0.00 0.00 39.21 2.59
3858 4238 2.231235 GTCAAAATTGAAGCACGGGGAT 59.769 45.455 0.00 0.00 39.21 3.85
3859 4239 1.611491 GTCAAAATTGAAGCACGGGGA 59.389 47.619 0.00 0.00 39.21 4.81
3860 4240 1.336795 GGTCAAAATTGAAGCACGGGG 60.337 52.381 0.00 0.00 39.21 5.73
3861 4241 1.665735 CGGTCAAAATTGAAGCACGGG 60.666 52.381 0.00 0.00 39.21 5.28
3862 4242 1.001815 ACGGTCAAAATTGAAGCACGG 60.002 47.619 0.00 0.00 39.21 4.94
3863 4243 2.399396 ACGGTCAAAATTGAAGCACG 57.601 45.000 0.00 3.88 39.21 5.34
3864 4244 6.763303 AATTTACGGTCAAAATTGAAGCAC 57.237 33.333 0.00 0.00 39.21 4.40
3865 4245 8.756864 GTTAAATTTACGGTCAAAATTGAAGCA 58.243 29.630 0.00 0.00 39.21 3.91
3866 4246 8.974408 AGTTAAATTTACGGTCAAAATTGAAGC 58.026 29.630 0.00 0.00 39.21 3.86
3869 4249 9.896263 GGTAGTTAAATTTACGGTCAAAATTGA 57.104 29.630 0.00 0.00 36.81 2.57
3870 4250 9.680315 TGGTAGTTAAATTTACGGTCAAAATTG 57.320 29.630 0.00 0.00 36.81 2.32
3872 4252 9.902196 CTTGGTAGTTAAATTTACGGTCAAAAT 57.098 29.630 0.00 0.00 0.00 1.82
3873 4253 9.118300 TCTTGGTAGTTAAATTTACGGTCAAAA 57.882 29.630 0.00 0.00 0.00 2.44
3874 4254 8.558700 GTCTTGGTAGTTAAATTTACGGTCAAA 58.441 33.333 0.00 0.00 0.00 2.69
3875 4255 7.173047 GGTCTTGGTAGTTAAATTTACGGTCAA 59.827 37.037 0.00 0.00 0.00 3.18
3876 4256 6.650390 GGTCTTGGTAGTTAAATTTACGGTCA 59.350 38.462 0.00 0.00 0.00 4.02
3877 4257 6.183360 CGGTCTTGGTAGTTAAATTTACGGTC 60.183 42.308 0.00 0.00 0.00 4.79
3878 4258 5.639082 CGGTCTTGGTAGTTAAATTTACGGT 59.361 40.000 0.00 0.00 0.00 4.83
3879 4259 5.868801 TCGGTCTTGGTAGTTAAATTTACGG 59.131 40.000 0.00 0.00 0.00 4.02
3880 4260 6.949578 TCGGTCTTGGTAGTTAAATTTACG 57.050 37.500 0.00 0.00 0.00 3.18
3881 4261 7.695201 GCAATCGGTCTTGGTAGTTAAATTTAC 59.305 37.037 0.00 0.00 0.00 2.01
3882 4262 7.413219 CGCAATCGGTCTTGGTAGTTAAATTTA 60.413 37.037 0.00 0.00 0.00 1.40
3883 4263 6.617879 GCAATCGGTCTTGGTAGTTAAATTT 58.382 36.000 0.00 0.00 0.00 1.82
3884 4264 5.163794 CGCAATCGGTCTTGGTAGTTAAATT 60.164 40.000 0.00 0.00 0.00 1.82
3885 4265 4.331717 CGCAATCGGTCTTGGTAGTTAAAT 59.668 41.667 0.00 0.00 0.00 1.40
3886 4266 3.680937 CGCAATCGGTCTTGGTAGTTAAA 59.319 43.478 0.00 0.00 0.00 1.52
3887 4267 3.255725 CGCAATCGGTCTTGGTAGTTAA 58.744 45.455 0.00 0.00 0.00 2.01
3888 4268 2.883574 CGCAATCGGTCTTGGTAGTTA 58.116 47.619 0.00 0.00 0.00 2.24
3889 4269 1.722011 CGCAATCGGTCTTGGTAGTT 58.278 50.000 0.00 0.00 0.00 2.24
3890 4270 3.436001 CGCAATCGGTCTTGGTAGT 57.564 52.632 0.00 0.00 0.00 2.73
3902 4282 2.872337 CTTTTGCTCCCGCCGCAATC 62.872 60.000 5.33 0.00 45.67 2.67
3903 4283 2.988684 TTTTGCTCCCGCCGCAAT 60.989 55.556 5.33 0.00 45.67 3.56
3904 4284 3.669344 CTTTTGCTCCCGCCGCAA 61.669 61.111 0.00 0.00 44.83 4.85
3905 4285 4.887932 TATAACTTTTGCTCCCGCCGCA 62.888 50.000 0.00 0.00 35.22 5.69
3906 4286 1.654023 ATAACTTTTGCTCCCGCCGC 61.654 55.000 0.00 0.00 34.43 6.53
3907 4287 1.658994 TATAACTTTTGCTCCCGCCG 58.341 50.000 0.00 0.00 34.43 6.46
3908 4288 3.211045 TGATATAACTTTTGCTCCCGCC 58.789 45.455 0.00 0.00 34.43 6.13
3909 4289 3.877508 ACTGATATAACTTTTGCTCCCGC 59.122 43.478 0.00 0.00 0.00 6.13
3910 4290 5.116180 TCACTGATATAACTTTTGCTCCCG 58.884 41.667 0.00 0.00 0.00 5.14
3911 4291 7.573968 ATTCACTGATATAACTTTTGCTCCC 57.426 36.000 0.00 0.00 0.00 4.30
3912 4292 7.852945 CGAATTCACTGATATAACTTTTGCTCC 59.147 37.037 6.22 0.00 0.00 4.70
3913 4293 8.391106 ACGAATTCACTGATATAACTTTTGCTC 58.609 33.333 6.22 0.00 0.00 4.26
3914 4294 8.268850 ACGAATTCACTGATATAACTTTTGCT 57.731 30.769 6.22 0.00 0.00 3.91
3919 4299 9.961265 TCGAATACGAATTCACTGATATAACTT 57.039 29.630 6.22 0.00 45.74 2.66
3953 4333 9.628746 GCGGGAGAAAAAGTTACATAATTAAAA 57.371 29.630 0.00 0.00 0.00 1.52
3954 4334 8.245491 GGCGGGAGAAAAAGTTACATAATTAAA 58.755 33.333 0.00 0.00 0.00 1.52
3955 4335 7.414319 CGGCGGGAGAAAAAGTTACATAATTAA 60.414 37.037 0.00 0.00 0.00 1.40
3956 4336 6.037391 CGGCGGGAGAAAAAGTTACATAATTA 59.963 38.462 0.00 0.00 0.00 1.40
3957 4337 5.163693 CGGCGGGAGAAAAAGTTACATAATT 60.164 40.000 0.00 0.00 0.00 1.40
3958 4338 4.334481 CGGCGGGAGAAAAAGTTACATAAT 59.666 41.667 0.00 0.00 0.00 1.28
3959 4339 3.685756 CGGCGGGAGAAAAAGTTACATAA 59.314 43.478 0.00 0.00 0.00 1.90
3960 4340 3.264104 CGGCGGGAGAAAAAGTTACATA 58.736 45.455 0.00 0.00 0.00 2.29
3961 4341 2.081462 CGGCGGGAGAAAAAGTTACAT 58.919 47.619 0.00 0.00 0.00 2.29
3962 4342 1.515081 CGGCGGGAGAAAAAGTTACA 58.485 50.000 0.00 0.00 0.00 2.41
3963 4343 0.167470 GCGGCGGGAGAAAAAGTTAC 59.833 55.000 9.78 0.00 0.00 2.50
3964 4344 0.250381 TGCGGCGGGAGAAAAAGTTA 60.250 50.000 9.78 0.00 0.00 2.24
3965 4345 1.515521 CTGCGGCGGGAGAAAAAGTT 61.516 55.000 9.78 0.00 32.53 2.66
3966 4346 1.966451 CTGCGGCGGGAGAAAAAGT 60.966 57.895 9.78 0.00 32.53 2.66
3967 4347 1.912371 GACTGCGGCGGGAGAAAAAG 61.912 60.000 19.55 0.00 35.29 2.27
3968 4348 1.964373 GACTGCGGCGGGAGAAAAA 60.964 57.895 19.55 0.00 35.29 1.94
3969 4349 2.358247 GACTGCGGCGGGAGAAAA 60.358 61.111 19.55 0.00 35.29 2.29
3970 4350 4.735132 CGACTGCGGCGGGAGAAA 62.735 66.667 19.55 0.00 35.29 2.52
3980 4360 1.213094 AACAAACGAGACCGACTGCG 61.213 55.000 0.00 0.00 39.50 5.18
3981 4361 1.774639 TAACAAACGAGACCGACTGC 58.225 50.000 0.00 0.00 39.50 4.40
3982 4362 4.985044 ATTTAACAAACGAGACCGACTG 57.015 40.909 0.00 0.00 39.50 3.51
3983 4363 5.996669 AAATTTAACAAACGAGACCGACT 57.003 34.783 0.00 0.00 39.50 4.18
3984 4364 6.739550 CCATAAATTTAACAAACGAGACCGAC 59.260 38.462 1.21 0.00 39.50 4.79
3985 4365 6.427547 ACCATAAATTTAACAAACGAGACCGA 59.572 34.615 1.21 0.00 39.50 4.69
3986 4366 6.604930 ACCATAAATTTAACAAACGAGACCG 58.395 36.000 1.21 0.00 42.50 4.79
3987 4367 7.586747 TGACCATAAATTTAACAAACGAGACC 58.413 34.615 1.21 0.00 0.00 3.85
3988 4368 9.453325 TTTGACCATAAATTTAACAAACGAGAC 57.547 29.630 1.21 0.00 0.00 3.36
3989 4369 9.672086 CTTTGACCATAAATTTAACAAACGAGA 57.328 29.630 1.21 0.00 0.00 4.04
3990 4370 9.458374 ACTTTGACCATAAATTTAACAAACGAG 57.542 29.630 1.21 4.89 0.00 4.18
3991 4371 9.804758 AACTTTGACCATAAATTTAACAAACGA 57.195 25.926 1.21 0.00 0.00 3.85
3995 4375 9.453325 GTCGAACTTTGACCATAAATTTAACAA 57.547 29.630 1.21 4.62 0.00 2.83
4009 4389 0.316204 TCCCGAGGTCGAACTTTGAC 59.684 55.000 3.47 0.86 43.02 3.18
4010 4390 1.042229 TTCCCGAGGTCGAACTTTGA 58.958 50.000 3.47 0.00 43.02 2.69
4011 4391 1.145803 GTTCCCGAGGTCGAACTTTG 58.854 55.000 3.47 0.00 43.02 2.77
4012 4392 0.034476 GGTTCCCGAGGTCGAACTTT 59.966 55.000 3.47 0.00 43.02 2.66
4013 4393 1.670015 GGTTCCCGAGGTCGAACTT 59.330 57.895 3.47 0.00 43.02 2.66
4014 4394 3.374332 GGTTCCCGAGGTCGAACT 58.626 61.111 0.34 0.34 43.02 3.01
4027 4407 3.778360 TATAGTGCGCCCGCGGTTC 62.778 63.158 26.12 14.53 45.51 3.62
4028 4408 2.653953 AATATAGTGCGCCCGCGGTT 62.654 55.000 26.12 4.21 45.51 4.44
4029 4409 2.653953 AAATATAGTGCGCCCGCGGT 62.654 55.000 26.12 6.67 45.51 5.68
4030 4410 1.503818 AAAATATAGTGCGCCCGCGG 61.504 55.000 21.04 21.04 45.51 6.46
4031 4411 0.384230 CAAAATATAGTGCGCCCGCG 60.384 55.000 4.18 4.36 45.51 6.46
4032 4412 0.040425 CCAAAATATAGTGCGCCCGC 60.040 55.000 4.18 5.60 42.35 6.13
4033 4413 1.588674 TCCAAAATATAGTGCGCCCG 58.411 50.000 4.18 0.00 0.00 6.13
4034 4414 3.305335 CCATTCCAAAATATAGTGCGCCC 60.305 47.826 4.18 0.00 0.00 6.13
4035 4415 3.568007 TCCATTCCAAAATATAGTGCGCC 59.432 43.478 4.18 0.00 0.00 6.53
4036 4416 4.515191 TCTCCATTCCAAAATATAGTGCGC 59.485 41.667 0.00 0.00 0.00 6.09
4037 4417 5.991606 TCTCTCCATTCCAAAATATAGTGCG 59.008 40.000 0.00 0.00 0.00 5.34
4038 4418 6.995091 ACTCTCTCCATTCCAAAATATAGTGC 59.005 38.462 0.00 0.00 0.00 4.40
4039 4419 9.482627 GTACTCTCTCCATTCCAAAATATAGTG 57.517 37.037 0.00 0.00 0.00 2.74
4040 4420 9.213777 TGTACTCTCTCCATTCCAAAATATAGT 57.786 33.333 0.00 0.00 0.00 2.12
4043 4423 8.552296 ACTTGTACTCTCTCCATTCCAAAATAT 58.448 33.333 0.00 0.00 0.00 1.28
4044 4424 7.918076 ACTTGTACTCTCTCCATTCCAAAATA 58.082 34.615 0.00 0.00 0.00 1.40
4045 4425 6.784031 ACTTGTACTCTCTCCATTCCAAAAT 58.216 36.000 0.00 0.00 0.00 1.82
4046 4426 6.187727 ACTTGTACTCTCTCCATTCCAAAA 57.812 37.500 0.00 0.00 0.00 2.44
4047 4427 5.825593 ACTTGTACTCTCTCCATTCCAAA 57.174 39.130 0.00 0.00 0.00 3.28
4048 4428 5.825593 AACTTGTACTCTCTCCATTCCAA 57.174 39.130 0.00 0.00 0.00 3.53
4049 4429 5.306937 TCAAACTTGTACTCTCTCCATTCCA 59.693 40.000 0.00 0.00 0.00 3.53
4050 4430 5.794894 TCAAACTTGTACTCTCTCCATTCC 58.205 41.667 0.00 0.00 0.00 3.01
4051 4431 6.876257 ACATCAAACTTGTACTCTCTCCATTC 59.124 38.462 0.00 0.00 0.00 2.67
4052 4432 6.773638 ACATCAAACTTGTACTCTCTCCATT 58.226 36.000 0.00 0.00 0.00 3.16
4053 4433 6.365970 ACATCAAACTTGTACTCTCTCCAT 57.634 37.500 0.00 0.00 0.00 3.41
4054 4434 5.808366 ACATCAAACTTGTACTCTCTCCA 57.192 39.130 0.00 0.00 0.00 3.86
4055 4435 7.159322 TCTACATCAAACTTGTACTCTCTCC 57.841 40.000 0.00 0.00 0.00 3.71
4056 4436 9.296400 GAATCTACATCAAACTTGTACTCTCTC 57.704 37.037 0.00 0.00 0.00 3.20
4057 4437 8.807118 TGAATCTACATCAAACTTGTACTCTCT 58.193 33.333 0.00 0.00 0.00 3.10
4058 4438 8.988064 TGAATCTACATCAAACTTGTACTCTC 57.012 34.615 0.00 0.00 0.00 3.20
4059 4439 9.950496 ATTGAATCTACATCAAACTTGTACTCT 57.050 29.630 0.00 0.00 39.98 3.24
4155 4538 3.981071 TGAGATGGATTCTTCGGTTGT 57.019 42.857 0.00 0.00 33.74 3.32
4205 4588 5.285401 TGTATGGAGGGGTTATCTTCTTCA 58.715 41.667 0.00 0.00 0.00 3.02
4217 4600 3.117888 AGTTATGTGCTTGTATGGAGGGG 60.118 47.826 0.00 0.00 0.00 4.79
4237 4620 0.321653 GGATGCGTTGGAGGTTGAGT 60.322 55.000 0.00 0.00 0.00 3.41
4242 4625 1.217244 GTACGGATGCGTTGGAGGT 59.783 57.895 19.82 0.00 0.00 3.85
4257 4640 5.801350 TGCAGAGCTTTGTATTCATGTAC 57.199 39.130 6.08 0.00 0.00 2.90
4259 4642 4.763793 ACTTGCAGAGCTTTGTATTCATGT 59.236 37.500 6.08 1.49 0.00 3.21
4396 4779 6.821616 ACTATCCATTGAGAAGATTCTGGT 57.178 37.500 0.00 0.00 37.73 4.00
4446 4829 1.851666 CATGTTTCAACGTTGCGCTTT 59.148 42.857 23.47 5.32 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.