Multiple sequence alignment - TraesCS1A01G287700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G287700 chr1A 100.000 2312 0 0 1 2312 485012082 485009771 0.000000e+00 4270
1 TraesCS1A01G287700 chr1A 91.781 438 26 7 881 1314 490418202 490418633 3.290000e-168 601
2 TraesCS1A01G287700 chr1A 90.575 435 31 7 882 1314 487568617 487569043 3.330000e-158 568
3 TraesCS1A01G287700 chr1A 76.426 263 44 11 11 271 487607253 487607499 2.410000e-25 126
4 TraesCS1A01G287700 chr1D 89.194 1166 67 30 518 1642 384845512 384844365 0.000000e+00 1400
5 TraesCS1A01G287700 chr1D 87.428 692 61 13 1632 2312 384844346 384843670 0.000000e+00 773
6 TraesCS1A01G287700 chr1D 90.271 442 34 9 881 1318 388026983 388027419 9.270000e-159 569
7 TraesCS1A01G287700 chr1D 90.433 439 28 11 881 1314 388024499 388024928 1.200000e-157 566
8 TraesCS1A01G287700 chr1D 90.433 439 28 11 881 1314 388603522 388603951 1.200000e-157 566
9 TraesCS1A01G287700 chr1D 83.929 112 18 0 160 271 388605385 388605496 8.730000e-20 108
10 TraesCS1A01G287700 chr1B 83.676 1360 101 64 368 1644 516962205 516960884 0.000000e+00 1170
11 TraesCS1A01G287700 chr1B 88.858 718 47 20 1584 2291 516960883 516960189 0.000000e+00 852
12 TraesCS1A01G287700 chr1B 93.719 398 20 3 917 1314 521740741 521741133 1.980000e-165 592
13 TraesCS1A01G287700 chr1B 90.345 435 32 6 881 1314 521352327 521352752 1.550000e-156 562
14 TraesCS1A01G287700 chr1B 75.379 264 46 13 11 271 521862990 521863237 2.430000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G287700 chr1A 485009771 485012082 2311 True 4270.0 4270 100.000 1 2312 1 chr1A.!!$R1 2311
1 TraesCS1A01G287700 chr1D 384843670 384845512 1842 True 1086.5 1400 88.311 518 2312 2 chr1D.!!$R1 1794
2 TraesCS1A01G287700 chr1D 388024499 388027419 2920 False 567.5 569 90.352 881 1318 2 chr1D.!!$F1 437
3 TraesCS1A01G287700 chr1D 388603522 388605496 1974 False 337.0 566 87.181 160 1314 2 chr1D.!!$F2 1154
4 TraesCS1A01G287700 chr1B 516960189 516962205 2016 True 1011.0 1170 86.267 368 2291 2 chr1B.!!$R1 1923

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
488 490 0.034337 TGTGAACCGTGGTTAGAGCC 59.966 55.0 3.85 0.0 38.6 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 4272 0.815615 GGTCTATTTGAGCCCGGCTG 60.816 60.0 19.21 0.46 39.88 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.708563 GCAAGACTAGCACAACCAAAA 57.291 42.857 0.00 0.00 0.00 2.44
21 22 4.040445 GCAAGACTAGCACAACCAAAAA 57.960 40.909 0.00 0.00 0.00 1.94
22 23 3.796717 GCAAGACTAGCACAACCAAAAAC 59.203 43.478 0.00 0.00 0.00 2.43
23 24 4.440112 GCAAGACTAGCACAACCAAAAACT 60.440 41.667 0.00 0.00 0.00 2.66
24 25 4.900635 AGACTAGCACAACCAAAAACTG 57.099 40.909 0.00 0.00 0.00 3.16
46 47 6.247229 TGGCTCTCCAGCTAAAAATATACA 57.753 37.500 0.00 0.00 46.03 2.29
47 48 6.841601 TGGCTCTCCAGCTAAAAATATACAT 58.158 36.000 0.00 0.00 46.03 2.29
48 49 6.712095 TGGCTCTCCAGCTAAAAATATACATG 59.288 38.462 0.00 0.00 46.03 3.21
49 50 6.712547 GGCTCTCCAGCTAAAAATATACATGT 59.287 38.462 2.69 2.69 46.03 3.21
50 51 7.878127 GGCTCTCCAGCTAAAAATATACATGTA 59.122 37.037 8.27 8.27 46.03 2.29
51 52 8.713271 GCTCTCCAGCTAAAAATATACATGTAC 58.287 37.037 7.96 0.00 43.09 2.90
52 53 9.764363 CTCTCCAGCTAAAAATATACATGTACA 57.236 33.333 7.96 0.00 0.00 2.90
53 54 9.542462 TCTCCAGCTAAAAATATACATGTACAC 57.458 33.333 7.96 0.00 0.00 2.90
54 55 9.547753 CTCCAGCTAAAAATATACATGTACACT 57.452 33.333 7.96 0.00 0.00 3.55
55 56 9.325198 TCCAGCTAAAAATATACATGTACACTG 57.675 33.333 7.96 0.52 0.00 3.66
56 57 8.559536 CCAGCTAAAAATATACATGTACACTGG 58.440 37.037 7.96 4.12 0.00 4.00
57 58 9.109393 CAGCTAAAAATATACATGTACACTGGT 57.891 33.333 7.96 0.00 0.00 4.00
68 69 9.733556 ATACATGTACACTGGTATGAAAAAGAA 57.266 29.630 7.96 0.00 0.00 2.52
69 70 8.635765 ACATGTACACTGGTATGAAAAAGAAT 57.364 30.769 0.00 0.00 0.00 2.40
70 71 8.514594 ACATGTACACTGGTATGAAAAAGAATG 58.485 33.333 0.00 0.00 0.00 2.67
71 72 7.447374 TGTACACTGGTATGAAAAAGAATGG 57.553 36.000 0.00 0.00 0.00 3.16
72 73 7.227873 TGTACACTGGTATGAAAAAGAATGGA 58.772 34.615 0.00 0.00 0.00 3.41
73 74 7.721842 TGTACACTGGTATGAAAAAGAATGGAA 59.278 33.333 0.00 0.00 0.00 3.53
74 75 7.595819 ACACTGGTATGAAAAAGAATGGAAA 57.404 32.000 0.00 0.00 0.00 3.13
75 76 8.017418 ACACTGGTATGAAAAAGAATGGAAAA 57.983 30.769 0.00 0.00 0.00 2.29
76 77 8.482128 ACACTGGTATGAAAAAGAATGGAAAAA 58.518 29.630 0.00 0.00 0.00 1.94
77 78 9.492973 CACTGGTATGAAAAAGAATGGAAAAAT 57.507 29.630 0.00 0.00 0.00 1.82
78 79 9.710900 ACTGGTATGAAAAAGAATGGAAAAATC 57.289 29.630 0.00 0.00 0.00 2.17
79 80 9.933723 CTGGTATGAAAAAGAATGGAAAAATCT 57.066 29.630 0.00 0.00 0.00 2.40
80 81 9.927668 TGGTATGAAAAAGAATGGAAAAATCTC 57.072 29.630 0.00 0.00 0.00 2.75
93 94 8.930846 ATGGAAAAATCTCTATCAAGTATGGG 57.069 34.615 0.00 0.00 0.00 4.00
94 95 6.772716 TGGAAAAATCTCTATCAAGTATGGGC 59.227 38.462 0.00 0.00 0.00 5.36
95 96 6.772716 GGAAAAATCTCTATCAAGTATGGGCA 59.227 38.462 0.00 0.00 0.00 5.36
96 97 7.040823 GGAAAAATCTCTATCAAGTATGGGCAG 60.041 40.741 0.00 0.00 0.00 4.85
97 98 6.753913 AAATCTCTATCAAGTATGGGCAGA 57.246 37.500 0.00 0.00 0.00 4.26
98 99 6.753913 AATCTCTATCAAGTATGGGCAGAA 57.246 37.500 0.00 0.00 0.00 3.02
99 100 6.753913 ATCTCTATCAAGTATGGGCAGAAA 57.246 37.500 0.00 0.00 0.00 2.52
100 101 6.166984 TCTCTATCAAGTATGGGCAGAAAG 57.833 41.667 0.00 0.00 0.00 2.62
101 102 5.899547 TCTCTATCAAGTATGGGCAGAAAGA 59.100 40.000 0.00 0.00 0.00 2.52
102 103 6.556495 TCTCTATCAAGTATGGGCAGAAAGAT 59.444 38.462 0.00 0.00 0.00 2.40
103 104 7.071698 TCTCTATCAAGTATGGGCAGAAAGATT 59.928 37.037 0.00 0.00 0.00 2.40
104 105 8.262601 TCTATCAAGTATGGGCAGAAAGATTA 57.737 34.615 0.00 0.00 0.00 1.75
105 106 8.150945 TCTATCAAGTATGGGCAGAAAGATTAC 58.849 37.037 0.00 0.00 0.00 1.89
106 107 6.313519 TCAAGTATGGGCAGAAAGATTACT 57.686 37.500 0.00 0.00 0.00 2.24
107 108 6.115446 TCAAGTATGGGCAGAAAGATTACTG 58.885 40.000 0.00 0.00 37.22 2.74
108 109 5.957771 AGTATGGGCAGAAAGATTACTGA 57.042 39.130 0.00 0.00 36.38 3.41
109 110 6.313519 AGTATGGGCAGAAAGATTACTGAA 57.686 37.500 0.00 0.00 36.38 3.02
110 111 6.352516 AGTATGGGCAGAAAGATTACTGAAG 58.647 40.000 0.00 0.00 36.38 3.02
111 112 3.347216 TGGGCAGAAAGATTACTGAAGC 58.653 45.455 0.00 0.00 36.38 3.86
112 113 3.244875 TGGGCAGAAAGATTACTGAAGCA 60.245 43.478 0.00 0.00 36.38 3.91
113 114 3.376546 GGGCAGAAAGATTACTGAAGCAG 59.623 47.826 0.00 0.00 36.38 4.24
114 115 4.256920 GGCAGAAAGATTACTGAAGCAGA 58.743 43.478 0.82 0.00 36.38 4.26
115 116 4.697352 GGCAGAAAGATTACTGAAGCAGAA 59.303 41.667 0.82 0.00 36.38 3.02
116 117 5.391416 GGCAGAAAGATTACTGAAGCAGAAC 60.391 44.000 0.82 0.00 36.38 3.01
117 118 5.180117 GCAGAAAGATTACTGAAGCAGAACA 59.820 40.000 0.82 0.00 36.38 3.18
118 119 6.620303 GCAGAAAGATTACTGAAGCAGAACAG 60.620 42.308 0.82 0.00 39.65 3.16
119 120 6.648310 CAGAAAGATTACTGAAGCAGAACAGA 59.352 38.462 0.82 0.00 37.54 3.41
120 121 7.172190 CAGAAAGATTACTGAAGCAGAACAGAA 59.828 37.037 0.82 0.00 37.54 3.02
121 122 7.716998 AGAAAGATTACTGAAGCAGAACAGAAA 59.283 33.333 0.82 0.00 37.54 2.52
122 123 6.793492 AGATTACTGAAGCAGAACAGAAAC 57.207 37.500 0.82 0.00 37.54 2.78
123 124 5.406780 AGATTACTGAAGCAGAACAGAAACG 59.593 40.000 0.82 0.00 37.54 3.60
124 125 3.179443 ACTGAAGCAGAACAGAAACGA 57.821 42.857 0.82 0.00 37.54 3.85
125 126 2.866762 ACTGAAGCAGAACAGAAACGAC 59.133 45.455 0.82 0.00 37.54 4.34
126 127 2.866156 CTGAAGCAGAACAGAAACGACA 59.134 45.455 0.00 0.00 36.38 4.35
127 128 3.266636 TGAAGCAGAACAGAAACGACAA 58.733 40.909 0.00 0.00 0.00 3.18
128 129 3.309682 TGAAGCAGAACAGAAACGACAAG 59.690 43.478 0.00 0.00 0.00 3.16
129 130 2.906354 AGCAGAACAGAAACGACAAGT 58.094 42.857 0.00 0.00 0.00 3.16
130 131 2.866762 AGCAGAACAGAAACGACAAGTC 59.133 45.455 0.00 0.00 0.00 3.01
131 132 2.032808 GCAGAACAGAAACGACAAGTCC 60.033 50.000 0.00 0.00 0.00 3.85
132 133 3.194861 CAGAACAGAAACGACAAGTCCA 58.805 45.455 0.00 0.00 0.00 4.02
133 134 3.246226 CAGAACAGAAACGACAAGTCCAG 59.754 47.826 0.00 0.00 0.00 3.86
134 135 2.981859 ACAGAAACGACAAGTCCAGT 57.018 45.000 0.00 0.00 0.00 4.00
135 136 2.550978 ACAGAAACGACAAGTCCAGTG 58.449 47.619 0.00 0.00 0.00 3.66
136 137 2.167693 ACAGAAACGACAAGTCCAGTGA 59.832 45.455 0.00 0.00 0.00 3.41
137 138 3.194861 CAGAAACGACAAGTCCAGTGAA 58.805 45.455 0.00 0.00 0.00 3.18
138 139 3.621268 CAGAAACGACAAGTCCAGTGAAA 59.379 43.478 0.00 0.00 0.00 2.69
139 140 4.094294 CAGAAACGACAAGTCCAGTGAAAA 59.906 41.667 0.00 0.00 0.00 2.29
140 141 4.332819 AGAAACGACAAGTCCAGTGAAAAG 59.667 41.667 0.00 0.00 0.00 2.27
141 142 1.940613 ACGACAAGTCCAGTGAAAAGC 59.059 47.619 0.00 0.00 0.00 3.51
142 143 2.213499 CGACAAGTCCAGTGAAAAGCT 58.787 47.619 0.00 0.00 0.00 3.74
143 144 2.221981 CGACAAGTCCAGTGAAAAGCTC 59.778 50.000 0.00 0.00 0.00 4.09
144 145 3.471680 GACAAGTCCAGTGAAAAGCTCT 58.528 45.455 0.00 0.00 0.00 4.09
145 146 3.209410 ACAAGTCCAGTGAAAAGCTCTG 58.791 45.455 0.00 0.00 37.75 3.35
150 151 1.602311 CAGTGAAAAGCTCTGGTGCT 58.398 50.000 0.00 0.00 46.40 4.40
151 152 1.266175 CAGTGAAAAGCTCTGGTGCTG 59.734 52.381 0.00 0.00 43.24 4.41
152 153 0.039708 GTGAAAAGCTCTGGTGCTGC 60.040 55.000 0.00 0.00 43.24 5.25
153 154 0.466007 TGAAAAGCTCTGGTGCTGCA 60.466 50.000 0.00 0.00 43.24 4.41
154 155 0.886563 GAAAAGCTCTGGTGCTGCAT 59.113 50.000 5.27 0.00 43.24 3.96
155 156 0.886563 AAAAGCTCTGGTGCTGCATC 59.113 50.000 5.27 5.56 43.24 3.91
156 157 0.037877 AAAGCTCTGGTGCTGCATCT 59.962 50.000 14.82 0.00 43.24 2.90
157 158 0.907486 AAGCTCTGGTGCTGCATCTA 59.093 50.000 14.82 1.45 43.24 1.98
158 159 0.177604 AGCTCTGGTGCTGCATCTAC 59.822 55.000 14.82 2.30 42.33 2.59
159 160 0.813210 GCTCTGGTGCTGCATCTACC 60.813 60.000 14.82 7.26 35.05 3.18
160 161 0.179062 CTCTGGTGCTGCATCTACCC 60.179 60.000 14.82 6.87 33.51 3.69
161 162 1.522355 CTGGTGCTGCATCTACCCG 60.522 63.158 14.82 0.00 33.51 5.28
162 163 1.960040 CTGGTGCTGCATCTACCCGA 61.960 60.000 14.82 0.00 33.51 5.14
163 164 1.337384 TGGTGCTGCATCTACCCGAT 61.337 55.000 14.82 0.00 33.51 4.18
164 165 0.179045 GGTGCTGCATCTACCCGATT 60.179 55.000 5.27 0.00 0.00 3.34
165 166 1.221414 GTGCTGCATCTACCCGATTC 58.779 55.000 5.27 0.00 0.00 2.52
166 167 0.249447 TGCTGCATCTACCCGATTCG 60.249 55.000 0.00 0.00 0.00 3.34
167 168 0.249489 GCTGCATCTACCCGATTCGT 60.249 55.000 5.20 0.00 0.00 3.85
168 169 1.000607 GCTGCATCTACCCGATTCGTA 60.001 52.381 5.20 0.00 0.00 3.43
169 170 2.922758 GCTGCATCTACCCGATTCGTAG 60.923 54.545 5.20 1.62 35.52 3.51
170 171 2.293677 CTGCATCTACCCGATTCGTAGT 59.706 50.000 5.20 4.89 35.66 2.73
171 172 3.479489 TGCATCTACCCGATTCGTAGTA 58.521 45.455 5.20 5.78 35.66 1.82
172 173 4.077108 TGCATCTACCCGATTCGTAGTAT 58.923 43.478 5.20 0.00 35.66 2.12
173 174 4.155462 TGCATCTACCCGATTCGTAGTATC 59.845 45.833 5.20 0.00 35.66 2.24
174 175 4.438472 GCATCTACCCGATTCGTAGTATCC 60.438 50.000 5.20 0.00 35.66 2.59
175 176 3.679389 TCTACCCGATTCGTAGTATCCC 58.321 50.000 5.20 0.00 35.66 3.85
176 177 2.369983 ACCCGATTCGTAGTATCCCA 57.630 50.000 5.20 0.00 0.00 4.37
177 178 2.236766 ACCCGATTCGTAGTATCCCAG 58.763 52.381 5.20 0.00 0.00 4.45
178 179 2.236766 CCCGATTCGTAGTATCCCAGT 58.763 52.381 5.20 0.00 0.00 4.00
179 180 2.228343 CCCGATTCGTAGTATCCCAGTC 59.772 54.545 5.20 0.00 0.00 3.51
180 181 2.228343 CCGATTCGTAGTATCCCAGTCC 59.772 54.545 5.20 0.00 0.00 3.85
181 182 2.095869 CGATTCGTAGTATCCCAGTCCG 60.096 54.545 0.00 0.00 0.00 4.79
182 183 1.683943 TTCGTAGTATCCCAGTCCGG 58.316 55.000 0.00 0.00 0.00 5.14
183 184 0.548031 TCGTAGTATCCCAGTCCGGT 59.452 55.000 0.00 0.00 0.00 5.28
184 185 1.768275 TCGTAGTATCCCAGTCCGGTA 59.232 52.381 0.00 0.00 0.00 4.02
185 186 1.876156 CGTAGTATCCCAGTCCGGTAC 59.124 57.143 0.00 0.00 0.00 3.34
186 187 2.746142 CGTAGTATCCCAGTCCGGTACA 60.746 54.545 0.00 0.00 0.00 2.90
187 188 2.068834 AGTATCCCAGTCCGGTACAG 57.931 55.000 0.00 0.00 0.00 2.74
188 189 1.567649 AGTATCCCAGTCCGGTACAGA 59.432 52.381 0.00 0.00 0.00 3.41
189 190 1.955080 GTATCCCAGTCCGGTACAGAG 59.045 57.143 0.00 0.00 0.00 3.35
190 191 0.335361 ATCCCAGTCCGGTACAGAGT 59.665 55.000 0.00 0.00 0.00 3.24
191 192 0.994247 TCCCAGTCCGGTACAGAGTA 59.006 55.000 0.00 0.00 0.00 2.59
192 193 1.064906 TCCCAGTCCGGTACAGAGTAG 60.065 57.143 0.00 0.00 0.00 2.57
193 194 1.064906 CCCAGTCCGGTACAGAGTAGA 60.065 57.143 0.00 0.00 0.00 2.59
194 195 2.290464 CCAGTCCGGTACAGAGTAGAG 58.710 57.143 0.00 0.00 0.00 2.43
195 196 1.671845 CAGTCCGGTACAGAGTAGAGC 59.328 57.143 0.00 0.00 0.00 4.09
196 197 1.281287 AGTCCGGTACAGAGTAGAGCA 59.719 52.381 0.00 0.00 0.00 4.26
197 198 2.089980 GTCCGGTACAGAGTAGAGCAA 58.910 52.381 0.00 0.00 0.00 3.91
198 199 2.089980 TCCGGTACAGAGTAGAGCAAC 58.910 52.381 0.00 0.00 0.00 4.17
199 200 1.134560 CCGGTACAGAGTAGAGCAACC 59.865 57.143 0.00 0.00 0.00 3.77
200 201 1.816835 CGGTACAGAGTAGAGCAACCA 59.183 52.381 0.00 0.00 0.00 3.67
201 202 2.427453 CGGTACAGAGTAGAGCAACCAT 59.573 50.000 0.00 0.00 0.00 3.55
202 203 3.735208 CGGTACAGAGTAGAGCAACCATG 60.735 52.174 0.00 0.00 0.00 3.66
214 215 2.529780 CAACCATGCTTTTCAAGGCA 57.470 45.000 0.00 0.00 42.80 4.75
215 216 2.137523 CAACCATGCTTTTCAAGGCAC 58.862 47.619 0.00 0.00 41.39 5.01
217 218 1.615392 ACCATGCTTTTCAAGGCACTC 59.385 47.619 0.00 0.00 38.49 3.51
218 219 1.614903 CCATGCTTTTCAAGGCACTCA 59.385 47.619 0.00 0.00 38.49 3.41
219 220 2.036217 CCATGCTTTTCAAGGCACTCAA 59.964 45.455 0.00 0.00 38.49 3.02
220 221 3.306502 CCATGCTTTTCAAGGCACTCAAT 60.307 43.478 0.00 0.00 38.49 2.57
221 222 4.082081 CCATGCTTTTCAAGGCACTCAATA 60.082 41.667 0.00 0.00 38.49 1.90
222 223 4.503741 TGCTTTTCAAGGCACTCAATAC 57.496 40.909 0.00 0.00 38.49 1.89
223 224 3.888323 TGCTTTTCAAGGCACTCAATACA 59.112 39.130 0.00 0.00 38.49 2.29
224 225 4.340666 TGCTTTTCAAGGCACTCAATACAA 59.659 37.500 0.00 0.00 38.49 2.41
225 226 4.681483 GCTTTTCAAGGCACTCAATACAAC 59.319 41.667 0.00 0.00 38.49 3.32
226 227 5.735922 GCTTTTCAAGGCACTCAATACAACA 60.736 40.000 0.00 0.00 38.49 3.33
227 228 5.437289 TTTCAAGGCACTCAATACAACAG 57.563 39.130 0.00 0.00 38.49 3.16
228 229 2.813754 TCAAGGCACTCAATACAACAGC 59.186 45.455 0.00 0.00 38.49 4.40
229 230 1.826385 AGGCACTCAATACAACAGCC 58.174 50.000 0.00 0.00 40.85 4.85
230 231 0.811281 GGCACTCAATACAACAGCCC 59.189 55.000 0.00 0.00 34.71 5.19
231 232 1.533625 GCACTCAATACAACAGCCCA 58.466 50.000 0.00 0.00 0.00 5.36
232 233 1.470098 GCACTCAATACAACAGCCCAG 59.530 52.381 0.00 0.00 0.00 4.45
233 234 2.086869 CACTCAATACAACAGCCCAGG 58.913 52.381 0.00 0.00 0.00 4.45
234 235 1.705186 ACTCAATACAACAGCCCAGGT 59.295 47.619 0.00 0.00 0.00 4.00
235 236 2.108250 ACTCAATACAACAGCCCAGGTT 59.892 45.455 0.00 0.00 0.00 3.50
236 237 3.329520 ACTCAATACAACAGCCCAGGTTA 59.670 43.478 0.00 0.00 0.00 2.85
237 238 3.681593 TCAATACAACAGCCCAGGTTAC 58.318 45.455 0.00 0.00 0.00 2.50
238 239 3.329520 TCAATACAACAGCCCAGGTTACT 59.670 43.478 0.00 0.00 0.00 2.24
239 240 2.851263 TACAACAGCCCAGGTTACTG 57.149 50.000 0.78 0.78 44.51 2.74
240 241 0.843984 ACAACAGCCCAGGTTACTGT 59.156 50.000 1.92 1.92 46.27 3.55
245 246 4.755266 ACAGCCCAGGTTACTGTTATAG 57.245 45.455 1.92 0.00 41.78 1.31
246 247 4.359105 ACAGCCCAGGTTACTGTTATAGA 58.641 43.478 1.92 0.00 41.78 1.98
247 248 4.406003 ACAGCCCAGGTTACTGTTATAGAG 59.594 45.833 1.92 0.00 41.78 2.43
248 249 4.406003 CAGCCCAGGTTACTGTTATAGAGT 59.594 45.833 0.00 0.00 43.36 3.24
249 250 4.406003 AGCCCAGGTTACTGTTATAGAGTG 59.594 45.833 0.00 0.00 43.36 3.51
250 251 4.404715 GCCCAGGTTACTGTTATAGAGTGA 59.595 45.833 0.00 0.00 43.36 3.41
251 252 5.105064 GCCCAGGTTACTGTTATAGAGTGAA 60.105 44.000 0.00 0.00 43.36 3.18
252 253 6.574350 CCCAGGTTACTGTTATAGAGTGAAG 58.426 44.000 0.00 0.00 43.36 3.02
253 254 6.154706 CCCAGGTTACTGTTATAGAGTGAAGT 59.845 42.308 0.00 0.00 43.36 3.01
254 255 7.036220 CCAGGTTACTGTTATAGAGTGAAGTG 58.964 42.308 0.00 0.00 43.36 3.16
255 256 7.093902 CCAGGTTACTGTTATAGAGTGAAGTGA 60.094 40.741 0.00 0.00 43.36 3.41
256 257 7.971168 CAGGTTACTGTTATAGAGTGAAGTGAG 59.029 40.741 0.00 0.00 39.92 3.51
257 258 6.752815 GGTTACTGTTATAGAGTGAAGTGAGC 59.247 42.308 0.00 0.00 0.00 4.26
258 259 5.984695 ACTGTTATAGAGTGAAGTGAGCA 57.015 39.130 0.00 0.00 0.00 4.26
259 260 5.715070 ACTGTTATAGAGTGAAGTGAGCAC 58.285 41.667 0.00 0.00 36.53 4.40
260 261 5.073311 TGTTATAGAGTGAAGTGAGCACC 57.927 43.478 0.00 0.00 36.95 5.01
261 262 4.526650 TGTTATAGAGTGAAGTGAGCACCA 59.473 41.667 0.00 0.00 36.95 4.17
262 263 3.883830 ATAGAGTGAAGTGAGCACCAG 57.116 47.619 0.00 0.00 36.95 4.00
263 264 1.709578 AGAGTGAAGTGAGCACCAGA 58.290 50.000 0.00 0.00 36.95 3.86
264 265 1.617850 AGAGTGAAGTGAGCACCAGAG 59.382 52.381 0.00 0.00 36.95 3.35
265 266 1.342819 GAGTGAAGTGAGCACCAGAGT 59.657 52.381 0.00 0.00 36.95 3.24
266 267 1.342819 AGTGAAGTGAGCACCAGAGTC 59.657 52.381 0.00 0.00 36.95 3.36
267 268 0.315251 TGAAGTGAGCACCAGAGTCG 59.685 55.000 0.00 0.00 0.00 4.18
268 269 0.315568 GAAGTGAGCACCAGAGTCGT 59.684 55.000 0.00 0.00 0.00 4.34
269 270 0.315568 AAGTGAGCACCAGAGTCGTC 59.684 55.000 0.00 0.00 0.00 4.20
270 271 1.442857 GTGAGCACCAGAGTCGTCG 60.443 63.158 0.00 0.00 0.00 5.12
271 272 1.897137 TGAGCACCAGAGTCGTCGT 60.897 57.895 0.00 0.00 0.00 4.34
272 273 1.442857 GAGCACCAGAGTCGTCGTG 60.443 63.158 0.00 3.69 0.00 4.35
273 274 2.131294 GAGCACCAGAGTCGTCGTGT 62.131 60.000 8.46 0.00 0.00 4.49
274 275 1.299926 GCACCAGAGTCGTCGTGTT 60.300 57.895 8.46 0.00 0.00 3.32
275 276 1.276145 GCACCAGAGTCGTCGTGTTC 61.276 60.000 8.46 0.00 0.00 3.18
276 277 0.311165 CACCAGAGTCGTCGTGTTCT 59.689 55.000 0.00 0.00 0.00 3.01
277 278 0.592148 ACCAGAGTCGTCGTGTTCTC 59.408 55.000 0.00 0.00 0.00 2.87
278 279 0.591659 CCAGAGTCGTCGTGTTCTCA 59.408 55.000 0.00 0.00 0.00 3.27
279 280 1.200252 CCAGAGTCGTCGTGTTCTCAT 59.800 52.381 0.00 0.00 0.00 2.90
280 281 2.418976 CCAGAGTCGTCGTGTTCTCATA 59.581 50.000 0.00 0.00 0.00 2.15
281 282 3.065510 CCAGAGTCGTCGTGTTCTCATAT 59.934 47.826 0.00 0.00 0.00 1.78
282 283 4.272748 CCAGAGTCGTCGTGTTCTCATATA 59.727 45.833 0.00 0.00 0.00 0.86
283 284 5.220796 CCAGAGTCGTCGTGTTCTCATATAA 60.221 44.000 0.00 0.00 0.00 0.98
284 285 6.255950 CAGAGTCGTCGTGTTCTCATATAAA 58.744 40.000 0.00 0.00 0.00 1.40
285 286 6.913132 CAGAGTCGTCGTGTTCTCATATAAAT 59.087 38.462 0.00 0.00 0.00 1.40
286 287 6.913132 AGAGTCGTCGTGTTCTCATATAAATG 59.087 38.462 0.00 0.00 0.00 2.32
287 288 6.792326 AGTCGTCGTGTTCTCATATAAATGA 58.208 36.000 0.00 0.00 39.87 2.57
288 289 6.691818 AGTCGTCGTGTTCTCATATAAATGAC 59.308 38.462 0.00 0.00 37.20 3.06
289 290 6.471198 GTCGTCGTGTTCTCATATAAATGACA 59.529 38.462 0.00 0.00 37.20 3.58
290 291 7.008901 GTCGTCGTGTTCTCATATAAATGACAA 59.991 37.037 0.00 0.00 37.20 3.18
291 292 7.704899 TCGTCGTGTTCTCATATAAATGACAAT 59.295 33.333 0.00 0.00 37.20 2.71
292 293 8.328146 CGTCGTGTTCTCATATAAATGACAATT 58.672 33.333 0.00 0.00 37.20 2.32
293 294 9.638300 GTCGTGTTCTCATATAAATGACAATTC 57.362 33.333 0.00 0.00 37.20 2.17
294 295 8.826710 TCGTGTTCTCATATAAATGACAATTCC 58.173 33.333 0.00 0.00 37.20 3.01
295 296 7.793888 CGTGTTCTCATATAAATGACAATTCCG 59.206 37.037 0.00 0.00 37.20 4.30
296 297 8.612619 GTGTTCTCATATAAATGACAATTCCGT 58.387 33.333 0.00 0.00 37.20 4.69
297 298 8.611757 TGTTCTCATATAAATGACAATTCCGTG 58.388 33.333 0.00 0.00 37.20 4.94
298 299 8.612619 GTTCTCATATAAATGACAATTCCGTGT 58.387 33.333 0.00 0.00 37.20 4.49
299 300 8.731275 TCTCATATAAATGACAATTCCGTGTT 57.269 30.769 0.00 0.00 37.20 3.32
300 301 9.173021 TCTCATATAAATGACAATTCCGTGTTT 57.827 29.630 0.00 0.00 37.20 2.83
301 302 9.787532 CTCATATAAATGACAATTCCGTGTTTT 57.212 29.630 0.00 0.00 37.20 2.43
306 307 9.921637 ATAAATGACAATTCCGTGTTTTTATGT 57.078 25.926 0.00 0.00 33.46 2.29
308 309 8.736751 AATGACAATTCCGTGTTTTTATGTAC 57.263 30.769 0.00 0.00 0.00 2.90
309 310 6.364261 TGACAATTCCGTGTTTTTATGTACG 58.636 36.000 0.00 0.00 36.39 3.67
310 311 5.148568 ACAATTCCGTGTTTTTATGTACGC 58.851 37.500 0.00 0.00 35.39 4.42
311 312 3.809918 TTCCGTGTTTTTATGTACGCC 57.190 42.857 0.00 0.00 35.39 5.68
312 313 2.075338 TCCGTGTTTTTATGTACGCCC 58.925 47.619 0.00 0.00 35.39 6.13
313 314 2.078392 CCGTGTTTTTATGTACGCCCT 58.922 47.619 0.00 0.00 35.39 5.19
314 315 2.485038 CCGTGTTTTTATGTACGCCCTT 59.515 45.455 0.00 0.00 35.39 3.95
315 316 3.058085 CCGTGTTTTTATGTACGCCCTTT 60.058 43.478 0.00 0.00 35.39 3.11
316 317 4.153835 CCGTGTTTTTATGTACGCCCTTTA 59.846 41.667 0.00 0.00 35.39 1.85
317 318 5.081394 CGTGTTTTTATGTACGCCCTTTAC 58.919 41.667 0.00 0.00 0.00 2.01
318 319 5.333952 CGTGTTTTTATGTACGCCCTTTACA 60.334 40.000 0.00 0.00 34.00 2.41
319 320 6.437094 GTGTTTTTATGTACGCCCTTTACAA 58.563 36.000 0.00 0.00 33.22 2.41
320 321 6.579666 GTGTTTTTATGTACGCCCTTTACAAG 59.420 38.462 0.00 0.00 33.22 3.16
321 322 6.262720 TGTTTTTATGTACGCCCTTTACAAGT 59.737 34.615 0.00 0.00 33.22 3.16
322 323 6.880942 TTTTATGTACGCCCTTTACAAGTT 57.119 33.333 0.00 0.00 33.22 2.66
323 324 6.880942 TTTATGTACGCCCTTTACAAGTTT 57.119 33.333 0.00 0.00 33.22 2.66
324 325 7.976135 TTTATGTACGCCCTTTACAAGTTTA 57.024 32.000 0.00 0.00 33.22 2.01
325 326 7.976135 TTATGTACGCCCTTTACAAGTTTAA 57.024 32.000 0.00 0.00 33.22 1.52
326 327 6.880942 ATGTACGCCCTTTACAAGTTTAAA 57.119 33.333 0.00 0.00 33.22 1.52
327 328 6.880942 TGTACGCCCTTTACAAGTTTAAAT 57.119 33.333 0.00 0.00 0.00 1.40
328 329 7.274603 TGTACGCCCTTTACAAGTTTAAATT 57.725 32.000 0.00 0.00 0.00 1.82
329 330 8.388484 TGTACGCCCTTTACAAGTTTAAATTA 57.612 30.769 0.00 0.00 0.00 1.40
330 331 9.012161 TGTACGCCCTTTACAAGTTTAAATTAT 57.988 29.630 0.00 0.00 0.00 1.28
331 332 9.281075 GTACGCCCTTTACAAGTTTAAATTATG 57.719 33.333 0.00 0.00 0.00 1.90
332 333 7.888424 ACGCCCTTTACAAGTTTAAATTATGT 58.112 30.769 0.00 0.29 0.00 2.29
333 334 8.024865 ACGCCCTTTACAAGTTTAAATTATGTC 58.975 33.333 6.72 0.00 0.00 3.06
334 335 8.241367 CGCCCTTTACAAGTTTAAATTATGTCT 58.759 33.333 6.72 0.00 0.00 3.41
335 336 9.353999 GCCCTTTACAAGTTTAAATTATGTCTG 57.646 33.333 6.72 0.00 0.00 3.51
342 343 9.120538 ACAAGTTTAAATTATGTCTGACAGTGT 57.879 29.630 16.46 0.00 0.00 3.55
343 344 9.385902 CAAGTTTAAATTATGTCTGACAGTGTG 57.614 33.333 16.46 0.00 0.00 3.82
344 345 8.677148 AGTTTAAATTATGTCTGACAGTGTGT 57.323 30.769 16.46 1.39 0.00 3.72
345 346 9.772973 AGTTTAAATTATGTCTGACAGTGTGTA 57.227 29.630 16.46 0.38 0.00 2.90
353 354 6.944557 TGTCTGACAGTGTGTATTTATTCG 57.055 37.500 6.36 0.00 0.00 3.34
354 355 6.452242 TGTCTGACAGTGTGTATTTATTCGT 58.548 36.000 6.36 0.00 0.00 3.85
355 356 6.926826 TGTCTGACAGTGTGTATTTATTCGTT 59.073 34.615 6.36 0.00 0.00 3.85
356 357 7.439955 TGTCTGACAGTGTGTATTTATTCGTTT 59.560 33.333 6.36 0.00 0.00 3.60
357 358 7.950496 GTCTGACAGTGTGTATTTATTCGTTTC 59.050 37.037 0.00 0.00 0.00 2.78
358 359 7.870954 TCTGACAGTGTGTATTTATTCGTTTCT 59.129 33.333 0.00 0.00 0.00 2.52
359 360 9.135843 CTGACAGTGTGTATTTATTCGTTTCTA 57.864 33.333 0.00 0.00 0.00 2.10
360 361 9.478768 TGACAGTGTGTATTTATTCGTTTCTAA 57.521 29.630 0.00 0.00 0.00 2.10
363 364 9.916397 CAGTGTGTATTTATTCGTTTCTAATCC 57.084 33.333 0.00 0.00 0.00 3.01
364 365 8.814235 AGTGTGTATTTATTCGTTTCTAATCCG 58.186 33.333 0.00 0.00 0.00 4.18
365 366 8.598075 GTGTGTATTTATTCGTTTCTAATCCGT 58.402 33.333 0.00 0.00 0.00 4.69
366 367 8.810427 TGTGTATTTATTCGTTTCTAATCCGTC 58.190 33.333 0.00 0.00 0.00 4.79
372 373 4.041740 TCGTTTCTAATCCGTCATCAGG 57.958 45.455 0.00 0.00 0.00 3.86
377 378 2.430694 TCTAATCCGTCATCAGGGTGTG 59.569 50.000 0.00 0.00 0.00 3.82
397 398 5.302357 GTGACTTCACATCCATTTCCTTC 57.698 43.478 4.43 0.00 45.75 3.46
401 402 6.213397 TGACTTCACATCCATTTCCTTCTCTA 59.787 38.462 0.00 0.00 0.00 2.43
411 413 7.841956 TCCATTTCCTTCTCTAAACTCTAGTG 58.158 38.462 0.00 0.00 0.00 2.74
424 426 5.570234 AACTCTAGTGTTTCTCGGAGATC 57.430 43.478 8.81 6.20 33.89 2.75
426 428 5.197451 ACTCTAGTGTTTCTCGGAGATCAT 58.803 41.667 8.81 5.20 33.89 2.45
458 460 4.380233 GGAAGAAACAGAGCACCAATGATG 60.380 45.833 0.00 0.00 0.00 3.07
464 466 2.617308 CAGAGCACCAATGATGATCCAC 59.383 50.000 0.00 0.00 32.82 4.02
467 469 3.698040 GAGCACCAATGATGATCCACTTT 59.302 43.478 0.00 0.00 0.00 2.66
468 470 4.091549 AGCACCAATGATGATCCACTTTT 58.908 39.130 0.00 0.00 0.00 2.27
469 471 4.529377 AGCACCAATGATGATCCACTTTTT 59.471 37.500 0.00 0.00 0.00 1.94
470 472 4.628333 GCACCAATGATGATCCACTTTTTG 59.372 41.667 0.00 0.00 0.00 2.44
472 474 5.636121 CACCAATGATGATCCACTTTTTGTG 59.364 40.000 0.00 0.00 45.80 3.33
484 486 4.625972 ACTTTTTGTGAACCGTGGTTAG 57.374 40.909 3.85 0.00 38.60 2.34
485 487 4.263435 ACTTTTTGTGAACCGTGGTTAGA 58.737 39.130 3.85 0.00 38.60 2.10
486 488 4.334481 ACTTTTTGTGAACCGTGGTTAGAG 59.666 41.667 3.85 0.00 38.60 2.43
487 489 1.873698 TTGTGAACCGTGGTTAGAGC 58.126 50.000 3.85 0.00 38.60 4.09
488 490 0.034337 TGTGAACCGTGGTTAGAGCC 59.966 55.000 3.85 0.00 38.60 4.70
489 491 0.320697 GTGAACCGTGGTTAGAGCCT 59.679 55.000 3.85 0.00 38.60 4.58
490 492 0.320374 TGAACCGTGGTTAGAGCCTG 59.680 55.000 3.85 0.00 38.60 4.85
491 493 0.606604 GAACCGTGGTTAGAGCCTGA 59.393 55.000 3.85 0.00 38.60 3.86
492 494 1.001633 GAACCGTGGTTAGAGCCTGAA 59.998 52.381 3.85 0.00 38.60 3.02
493 495 1.276622 ACCGTGGTTAGAGCCTGAAT 58.723 50.000 0.00 0.00 0.00 2.57
494 496 1.207329 ACCGTGGTTAGAGCCTGAATC 59.793 52.381 0.00 0.00 0.00 2.52
499 501 2.768527 TGGTTAGAGCCTGAATCCTCTG 59.231 50.000 0.00 0.00 38.76 3.35
502 504 4.591072 GGTTAGAGCCTGAATCCTCTGTAT 59.409 45.833 0.00 0.00 38.76 2.29
503 505 5.279256 GGTTAGAGCCTGAATCCTCTGTATC 60.279 48.000 0.00 0.00 38.76 2.24
504 506 4.197559 AGAGCCTGAATCCTCTGTATCT 57.802 45.455 0.00 0.00 37.07 1.98
505 507 5.332106 AGAGCCTGAATCCTCTGTATCTA 57.668 43.478 0.00 0.00 37.07 1.98
507 509 5.073437 AGCCTGAATCCTCTGTATCTACT 57.927 43.478 0.00 0.00 0.00 2.57
508 510 5.463154 AGCCTGAATCCTCTGTATCTACTT 58.537 41.667 0.00 0.00 0.00 2.24
509 511 5.304101 AGCCTGAATCCTCTGTATCTACTTG 59.696 44.000 0.00 0.00 0.00 3.16
510 512 5.510520 GCCTGAATCCTCTGTATCTACTTGG 60.511 48.000 0.00 0.00 0.00 3.61
511 513 5.835819 CCTGAATCCTCTGTATCTACTTGGA 59.164 44.000 0.00 0.00 0.00 3.53
512 514 6.015519 CCTGAATCCTCTGTATCTACTTGGAG 60.016 46.154 0.00 0.00 0.00 3.86
514 516 3.567397 TCCTCTGTATCTACTTGGAGCC 58.433 50.000 0.00 0.00 0.00 4.70
515 517 2.630580 CCTCTGTATCTACTTGGAGCCC 59.369 54.545 0.00 0.00 0.00 5.19
516 518 2.630580 CTCTGTATCTACTTGGAGCCCC 59.369 54.545 0.00 0.00 0.00 5.80
535 558 3.570550 CCCCTTGACACCAACGATTTTTA 59.429 43.478 0.00 0.00 0.00 1.52
536 559 4.219725 CCCCTTGACACCAACGATTTTTAT 59.780 41.667 0.00 0.00 0.00 1.40
537 560 5.279256 CCCCTTGACACCAACGATTTTTATT 60.279 40.000 0.00 0.00 0.00 1.40
564 587 6.813293 TCCTTCACTGATCCAATCTAATCA 57.187 37.500 0.00 0.00 0.00 2.57
575 598 6.677781 TCCAATCTAATCACCGTGATTTTC 57.322 37.500 27.42 0.00 44.03 2.29
576 599 6.414732 TCCAATCTAATCACCGTGATTTTCT 58.585 36.000 27.42 12.40 44.03 2.52
614 637 1.367599 CTGCTGCTAAGAGCCACTGC 61.368 60.000 0.00 0.00 41.51 4.40
636 664 4.072088 CACGCTCCGTTGCCGTTC 62.072 66.667 0.00 0.00 38.32 3.95
646 674 1.334239 CGTTGCCGTTCCATTTTTCGA 60.334 47.619 0.00 0.00 0.00 3.71
694 723 3.181520 CGAAACTGAATTCGCACCTAAGG 60.182 47.826 0.04 0.00 44.69 2.69
697 726 4.015872 ACTGAATTCGCACCTAAGGAAA 57.984 40.909 0.04 0.00 0.00 3.13
698 727 3.751698 ACTGAATTCGCACCTAAGGAAAC 59.248 43.478 0.04 0.00 0.00 2.78
699 728 2.739913 TGAATTCGCACCTAAGGAAACG 59.260 45.455 0.04 0.00 0.00 3.60
700 729 1.084289 ATTCGCACCTAAGGAAACGC 58.916 50.000 0.00 0.00 0.00 4.84
701 730 0.249953 TTCGCACCTAAGGAAACGCA 60.250 50.000 0.00 0.00 0.00 5.24
702 731 0.947180 TCGCACCTAAGGAAACGCAC 60.947 55.000 0.00 0.00 0.00 5.34
703 732 1.225376 CGCACCTAAGGAAACGCACA 61.225 55.000 0.00 0.00 0.00 4.57
704 733 0.517316 GCACCTAAGGAAACGCACAG 59.483 55.000 0.00 0.00 0.00 3.66
705 734 1.876416 GCACCTAAGGAAACGCACAGA 60.876 52.381 0.00 0.00 0.00 3.41
706 735 1.798813 CACCTAAGGAAACGCACAGAC 59.201 52.381 0.00 0.00 0.00 3.51
707 736 1.414919 ACCTAAGGAAACGCACAGACA 59.585 47.619 0.00 0.00 0.00 3.41
708 737 2.069273 CCTAAGGAAACGCACAGACAG 58.931 52.381 0.00 0.00 0.00 3.51
767 799 3.702478 GCCTCACGAATTTTCAGGC 57.298 52.632 4.87 4.87 42.87 4.85
865 901 1.749258 GACCTCCCCAATTCCGTGC 60.749 63.158 0.00 0.00 0.00 5.34
866 902 2.198304 GACCTCCCCAATTCCGTGCT 62.198 60.000 0.00 0.00 0.00 4.40
911 947 1.350310 TTTAATCCCCCTCCCCGCTC 61.350 60.000 0.00 0.00 0.00 5.03
930 967 2.566010 CCCCAAATCGCAACACCG 59.434 61.111 0.00 0.00 0.00 4.94
970 3492 0.324738 ACCTCCATCCGCTCTCTCAA 60.325 55.000 0.00 0.00 0.00 3.02
1335 3886 1.674057 CCCCTTCGTCAGCAACTCT 59.326 57.895 0.00 0.00 0.00 3.24
1415 3974 2.494059 CGGAACAATGTCACCTGTTCT 58.506 47.619 20.82 0.00 46.92 3.01
1475 4034 1.892819 CTCCATGAGCCCAGTCGTGT 61.893 60.000 0.00 0.00 32.36 4.49
1505 4066 7.358931 CGAATATATCGTCTTACCGTGCAAATT 60.359 37.037 0.00 0.00 46.52 1.82
1534 4095 6.575083 AGTTCGTCGAGATGTTATGATTTG 57.425 37.500 0.00 0.00 0.00 2.32
1540 4101 7.758076 TCGTCGAGATGTTATGATTTGTTTACT 59.242 33.333 0.00 0.00 0.00 2.24
1557 4118 5.465390 TGTTTACTGTCCGTTCTTGATTGAG 59.535 40.000 0.00 0.00 0.00 3.02
1566 4127 3.060895 CGTTCTTGATTGAGTTCCTACGC 59.939 47.826 0.00 0.00 0.00 4.42
1567 4128 4.246458 GTTCTTGATTGAGTTCCTACGCT 58.754 43.478 0.00 0.00 0.00 5.07
1591 4152 0.907486 TGAATCTCCCCACAGCTCTG 59.093 55.000 0.00 0.00 0.00 3.35
1638 4200 1.178276 TCTCCGAAGAAGGCAGAGTC 58.822 55.000 0.00 0.00 0.00 3.36
1644 4206 2.263945 GAAGAAGGCAGAGTCGCTAAC 58.736 52.381 6.86 0.69 0.00 2.34
1647 4272 0.390472 AAGGCAGAGTCGCTAACAGC 60.390 55.000 6.86 0.00 38.02 4.40
1665 4290 1.440145 GCAGCCGGGCTCAAATAGAC 61.440 60.000 20.97 0.00 36.40 2.59
1672 4297 0.255890 GGCTCAAATAGACCAGGCCA 59.744 55.000 5.01 0.00 34.79 5.36
1867 4494 0.537188 TCTCCCACATCTCGCTTTCC 59.463 55.000 0.00 0.00 0.00 3.13
1902 4529 0.449388 CACCTTCGCTTTCTGCATCC 59.551 55.000 0.00 0.00 43.06 3.51
1962 4590 0.843984 TCGATTTCCCCCTGAATCCC 59.156 55.000 0.00 0.00 31.67 3.85
1994 4622 1.896122 AACCCGTTGACCCGATCTCC 61.896 60.000 0.00 0.00 0.00 3.71
2000 4628 2.758737 GACCCGATCTCCCCGTGT 60.759 66.667 0.00 0.00 0.00 4.49
2035 4673 4.745751 TTCGTCCGCCGCCGATTT 62.746 61.111 0.00 0.00 36.29 2.17
2063 4701 0.791983 TCGTCGTCGAACTGAATCGC 60.792 55.000 1.37 0.00 43.34 4.58
2065 4703 2.150218 TCGTCGAACTGAATCGCGC 61.150 57.895 0.00 0.00 42.44 6.86
2066 4704 2.695646 GTCGAACTGAATCGCGCC 59.304 61.111 0.00 0.00 42.44 6.53
2067 4705 2.878991 TCGAACTGAATCGCGCCG 60.879 61.111 0.00 0.00 42.44 6.46
2068 4706 3.179265 CGAACTGAATCGCGCCGT 61.179 61.111 0.00 0.00 35.85 5.68
2069 4707 2.695646 GAACTGAATCGCGCCGTC 59.304 61.111 0.00 0.00 0.00 4.79
2070 4708 2.799540 GAACTGAATCGCGCCGTCC 61.800 63.158 0.00 0.00 0.00 4.79
2267 6045 1.204704 GTTTGGTTCCTGCCATAAGCC 59.795 52.381 0.00 0.00 42.71 4.35
2288 6066 1.411394 CGTGCATTGGCTTGTTCTTG 58.589 50.000 0.00 0.00 41.91 3.02
2292 6070 3.253188 GTGCATTGGCTTGTTCTTGTCTA 59.747 43.478 0.00 0.00 41.91 2.59
2297 6075 5.452078 TTGGCTTGTTCTTGTCTATTTGG 57.548 39.130 0.00 0.00 0.00 3.28
2298 6076 4.469657 TGGCTTGTTCTTGTCTATTTGGT 58.530 39.130 0.00 0.00 0.00 3.67
2301 6079 5.106515 GGCTTGTTCTTGTCTATTTGGTCTC 60.107 44.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.708563 TTTTGGTTGTGCTAGTCTTGC 57.291 42.857 0.00 0.00 0.00 4.01
2 3 4.097892 CCAGTTTTTGGTTGTGCTAGTCTT 59.902 41.667 0.00 0.00 42.41 3.01
3 4 3.632145 CCAGTTTTTGGTTGTGCTAGTCT 59.368 43.478 0.00 0.00 42.41 3.24
4 5 3.964909 CCAGTTTTTGGTTGTGCTAGTC 58.035 45.455 0.00 0.00 42.41 2.59
25 26 7.736447 ACATGTATATTTTTAGCTGGAGAGC 57.264 36.000 0.00 0.00 46.64 4.09
26 27 9.764363 TGTACATGTATATTTTTAGCTGGAGAG 57.236 33.333 9.18 0.00 0.00 3.20
27 28 9.542462 GTGTACATGTATATTTTTAGCTGGAGA 57.458 33.333 9.18 0.00 0.00 3.71
28 29 9.547753 AGTGTACATGTATATTTTTAGCTGGAG 57.452 33.333 9.18 0.00 0.00 3.86
29 30 9.325198 CAGTGTACATGTATATTTTTAGCTGGA 57.675 33.333 9.18 0.00 0.00 3.86
30 31 8.559536 CCAGTGTACATGTATATTTTTAGCTGG 58.440 37.037 9.18 12.59 0.00 4.85
31 32 9.109393 ACCAGTGTACATGTATATTTTTAGCTG 57.891 33.333 9.18 7.80 0.00 4.24
42 43 9.733556 TTCTTTTTCATACCAGTGTACATGTAT 57.266 29.630 9.18 4.46 0.00 2.29
43 44 9.733556 ATTCTTTTTCATACCAGTGTACATGTA 57.266 29.630 0.08 0.08 0.00 2.29
44 45 8.514594 CATTCTTTTTCATACCAGTGTACATGT 58.485 33.333 2.69 2.69 0.00 3.21
45 46 7.970061 CCATTCTTTTTCATACCAGTGTACATG 59.030 37.037 0.00 0.00 0.00 3.21
46 47 7.888021 TCCATTCTTTTTCATACCAGTGTACAT 59.112 33.333 0.00 0.00 0.00 2.29
47 48 7.227873 TCCATTCTTTTTCATACCAGTGTACA 58.772 34.615 0.00 0.00 0.00 2.90
48 49 7.681939 TCCATTCTTTTTCATACCAGTGTAC 57.318 36.000 0.00 0.00 0.00 2.90
49 50 8.698973 TTTCCATTCTTTTTCATACCAGTGTA 57.301 30.769 0.00 0.00 0.00 2.90
50 51 7.595819 TTTCCATTCTTTTTCATACCAGTGT 57.404 32.000 0.00 0.00 0.00 3.55
51 52 8.885494 TTTTTCCATTCTTTTTCATACCAGTG 57.115 30.769 0.00 0.00 0.00 3.66
52 53 9.710900 GATTTTTCCATTCTTTTTCATACCAGT 57.289 29.630 0.00 0.00 0.00 4.00
53 54 9.933723 AGATTTTTCCATTCTTTTTCATACCAG 57.066 29.630 0.00 0.00 0.00 4.00
54 55 9.927668 GAGATTTTTCCATTCTTTTTCATACCA 57.072 29.630 0.00 0.00 0.00 3.25
67 68 9.359653 CCCATACTTGATAGAGATTTTTCCATT 57.640 33.333 0.00 0.00 0.00 3.16
68 69 7.449704 GCCCATACTTGATAGAGATTTTTCCAT 59.550 37.037 0.00 0.00 0.00 3.41
69 70 6.772716 GCCCATACTTGATAGAGATTTTTCCA 59.227 38.462 0.00 0.00 0.00 3.53
70 71 6.772716 TGCCCATACTTGATAGAGATTTTTCC 59.227 38.462 0.00 0.00 0.00 3.13
71 72 7.716998 TCTGCCCATACTTGATAGAGATTTTTC 59.283 37.037 0.00 0.00 0.00 2.29
72 73 7.577303 TCTGCCCATACTTGATAGAGATTTTT 58.423 34.615 0.00 0.00 0.00 1.94
73 74 7.141758 TCTGCCCATACTTGATAGAGATTTT 57.858 36.000 0.00 0.00 0.00 1.82
74 75 6.753913 TCTGCCCATACTTGATAGAGATTT 57.246 37.500 0.00 0.00 0.00 2.17
75 76 6.753913 TTCTGCCCATACTTGATAGAGATT 57.246 37.500 0.00 0.00 0.00 2.40
76 77 6.556495 TCTTTCTGCCCATACTTGATAGAGAT 59.444 38.462 0.00 0.00 0.00 2.75
77 78 5.899547 TCTTTCTGCCCATACTTGATAGAGA 59.100 40.000 0.00 0.00 0.00 3.10
78 79 6.166984 TCTTTCTGCCCATACTTGATAGAG 57.833 41.667 0.00 0.00 0.00 2.43
79 80 6.753913 ATCTTTCTGCCCATACTTGATAGA 57.246 37.500 0.00 0.00 0.00 1.98
80 81 8.153550 AGTAATCTTTCTGCCCATACTTGATAG 58.846 37.037 0.00 0.00 0.00 2.08
81 82 7.933577 CAGTAATCTTTCTGCCCATACTTGATA 59.066 37.037 0.00 0.00 0.00 2.15
82 83 6.769822 CAGTAATCTTTCTGCCCATACTTGAT 59.230 38.462 0.00 0.00 0.00 2.57
83 84 6.070251 TCAGTAATCTTTCTGCCCATACTTGA 60.070 38.462 0.00 0.00 0.00 3.02
84 85 6.115446 TCAGTAATCTTTCTGCCCATACTTG 58.885 40.000 0.00 0.00 0.00 3.16
85 86 6.313519 TCAGTAATCTTTCTGCCCATACTT 57.686 37.500 0.00 0.00 0.00 2.24
86 87 5.957771 TCAGTAATCTTTCTGCCCATACT 57.042 39.130 0.00 0.00 0.00 2.12
87 88 5.008118 GCTTCAGTAATCTTTCTGCCCATAC 59.992 44.000 0.00 0.00 0.00 2.39
88 89 5.126067 GCTTCAGTAATCTTTCTGCCCATA 58.874 41.667 0.00 0.00 0.00 2.74
89 90 3.950395 GCTTCAGTAATCTTTCTGCCCAT 59.050 43.478 0.00 0.00 0.00 4.00
90 91 3.244875 TGCTTCAGTAATCTTTCTGCCCA 60.245 43.478 0.00 0.00 0.00 5.36
91 92 3.347216 TGCTTCAGTAATCTTTCTGCCC 58.653 45.455 0.00 0.00 0.00 5.36
92 93 4.256920 TCTGCTTCAGTAATCTTTCTGCC 58.743 43.478 0.00 0.00 32.61 4.85
93 94 5.180117 TGTTCTGCTTCAGTAATCTTTCTGC 59.820 40.000 0.00 0.00 32.61 4.26
94 95 6.648310 TCTGTTCTGCTTCAGTAATCTTTCTG 59.352 38.462 0.00 0.00 33.89 3.02
95 96 6.763355 TCTGTTCTGCTTCAGTAATCTTTCT 58.237 36.000 0.00 0.00 33.89 2.52
96 97 7.426929 TTCTGTTCTGCTTCAGTAATCTTTC 57.573 36.000 0.00 0.00 33.89 2.62
97 98 7.519008 CGTTTCTGTTCTGCTTCAGTAATCTTT 60.519 37.037 0.00 0.00 33.89 2.52
98 99 6.073548 CGTTTCTGTTCTGCTTCAGTAATCTT 60.074 38.462 0.00 0.00 33.89 2.40
99 100 5.406780 CGTTTCTGTTCTGCTTCAGTAATCT 59.593 40.000 0.00 0.00 33.89 2.40
100 101 5.405571 TCGTTTCTGTTCTGCTTCAGTAATC 59.594 40.000 0.00 0.00 33.89 1.75
101 102 5.177696 GTCGTTTCTGTTCTGCTTCAGTAAT 59.822 40.000 0.00 0.00 33.89 1.89
102 103 4.506654 GTCGTTTCTGTTCTGCTTCAGTAA 59.493 41.667 0.00 0.00 33.89 2.24
103 104 4.049186 GTCGTTTCTGTTCTGCTTCAGTA 58.951 43.478 0.00 0.00 33.89 2.74
104 105 2.866762 GTCGTTTCTGTTCTGCTTCAGT 59.133 45.455 0.00 0.00 33.89 3.41
105 106 2.866156 TGTCGTTTCTGTTCTGCTTCAG 59.134 45.455 0.00 0.00 0.00 3.02
106 107 2.899976 TGTCGTTTCTGTTCTGCTTCA 58.100 42.857 0.00 0.00 0.00 3.02
107 108 3.309954 ACTTGTCGTTTCTGTTCTGCTTC 59.690 43.478 0.00 0.00 0.00 3.86
108 109 3.270877 ACTTGTCGTTTCTGTTCTGCTT 58.729 40.909 0.00 0.00 0.00 3.91
109 110 2.866762 GACTTGTCGTTTCTGTTCTGCT 59.133 45.455 0.00 0.00 0.00 4.24
110 111 2.032808 GGACTTGTCGTTTCTGTTCTGC 60.033 50.000 0.00 0.00 0.00 4.26
111 112 3.194861 TGGACTTGTCGTTTCTGTTCTG 58.805 45.455 0.00 0.00 0.00 3.02
112 113 3.118738 ACTGGACTTGTCGTTTCTGTTCT 60.119 43.478 0.00 0.00 0.00 3.01
113 114 3.001330 CACTGGACTTGTCGTTTCTGTTC 59.999 47.826 0.00 0.00 0.00 3.18
114 115 2.936498 CACTGGACTTGTCGTTTCTGTT 59.064 45.455 0.00 0.00 0.00 3.16
115 116 2.167693 TCACTGGACTTGTCGTTTCTGT 59.832 45.455 0.00 0.00 0.00 3.41
116 117 2.821546 TCACTGGACTTGTCGTTTCTG 58.178 47.619 0.00 0.00 0.00 3.02
117 118 3.536956 TTCACTGGACTTGTCGTTTCT 57.463 42.857 0.00 0.00 0.00 2.52
118 119 4.588278 CTTTTCACTGGACTTGTCGTTTC 58.412 43.478 0.00 0.00 0.00 2.78
119 120 3.181500 GCTTTTCACTGGACTTGTCGTTT 60.181 43.478 0.00 0.00 0.00 3.60
120 121 2.354821 GCTTTTCACTGGACTTGTCGTT 59.645 45.455 0.00 0.00 0.00 3.85
121 122 1.940613 GCTTTTCACTGGACTTGTCGT 59.059 47.619 0.00 0.00 0.00 4.34
122 123 2.213499 AGCTTTTCACTGGACTTGTCG 58.787 47.619 0.00 0.00 0.00 4.35
123 124 3.249559 CAGAGCTTTTCACTGGACTTGTC 59.750 47.826 0.00 0.00 30.94 3.18
124 125 3.209410 CAGAGCTTTTCACTGGACTTGT 58.791 45.455 0.00 0.00 30.94 3.16
125 126 3.892918 CAGAGCTTTTCACTGGACTTG 57.107 47.619 0.00 0.00 30.94 3.16
131 132 1.266175 CAGCACCAGAGCTTTTCACTG 59.734 52.381 0.00 0.00 43.70 3.66
132 133 1.602311 CAGCACCAGAGCTTTTCACT 58.398 50.000 0.00 0.00 43.70 3.41
133 134 0.039708 GCAGCACCAGAGCTTTTCAC 60.040 55.000 0.00 0.00 43.70 3.18
134 135 0.466007 TGCAGCACCAGAGCTTTTCA 60.466 50.000 0.00 0.00 43.70 2.69
135 136 0.886563 ATGCAGCACCAGAGCTTTTC 59.113 50.000 0.00 0.00 43.70 2.29
136 137 0.886563 GATGCAGCACCAGAGCTTTT 59.113 50.000 0.00 0.00 43.70 2.27
137 138 0.037877 AGATGCAGCACCAGAGCTTT 59.962 50.000 4.07 0.00 43.70 3.51
138 139 0.907486 TAGATGCAGCACCAGAGCTT 59.093 50.000 4.07 0.00 43.70 3.74
140 141 0.813210 GGTAGATGCAGCACCAGAGC 60.813 60.000 15.69 0.00 32.32 4.09
141 142 0.179062 GGGTAGATGCAGCACCAGAG 60.179 60.000 20.16 0.00 33.78 3.35
142 143 1.907739 GGGTAGATGCAGCACCAGA 59.092 57.895 20.16 0.00 33.78 3.86
143 144 1.522355 CGGGTAGATGCAGCACCAG 60.522 63.158 20.16 14.60 33.78 4.00
144 145 1.337384 ATCGGGTAGATGCAGCACCA 61.337 55.000 20.16 6.14 38.36 4.17
145 146 0.179045 AATCGGGTAGATGCAGCACC 60.179 55.000 4.07 9.84 40.02 5.01
146 147 1.221414 GAATCGGGTAGATGCAGCAC 58.779 55.000 4.07 0.00 40.02 4.40
147 148 0.249447 CGAATCGGGTAGATGCAGCA 60.249 55.000 4.07 0.00 40.02 4.41
148 149 0.249489 ACGAATCGGGTAGATGCAGC 60.249 55.000 7.80 0.00 40.02 5.25
149 150 2.293677 ACTACGAATCGGGTAGATGCAG 59.706 50.000 7.80 0.00 39.76 4.41
150 151 2.304092 ACTACGAATCGGGTAGATGCA 58.696 47.619 7.80 0.00 39.76 3.96
151 152 4.438472 GGATACTACGAATCGGGTAGATGC 60.438 50.000 7.80 0.00 39.76 3.91
152 153 4.096081 GGGATACTACGAATCGGGTAGATG 59.904 50.000 7.80 0.00 39.76 2.90
153 154 4.263639 TGGGATACTACGAATCGGGTAGAT 60.264 45.833 7.80 0.00 39.76 1.98
154 155 3.072915 TGGGATACTACGAATCGGGTAGA 59.927 47.826 7.80 0.00 39.76 2.59
155 156 3.415212 TGGGATACTACGAATCGGGTAG 58.585 50.000 7.80 3.13 42.38 3.18
156 157 3.181440 ACTGGGATACTACGAATCGGGTA 60.181 47.826 7.80 10.10 0.00 3.69
157 158 2.236766 CTGGGATACTACGAATCGGGT 58.763 52.381 7.80 8.11 0.00 5.28
158 159 2.228343 GACTGGGATACTACGAATCGGG 59.772 54.545 7.80 1.81 0.00 5.14
159 160 2.228343 GGACTGGGATACTACGAATCGG 59.772 54.545 7.80 0.00 0.00 4.18
160 161 2.095869 CGGACTGGGATACTACGAATCG 60.096 54.545 0.00 0.00 0.00 3.34
161 162 2.228343 CCGGACTGGGATACTACGAATC 59.772 54.545 0.00 0.00 0.00 2.52
162 163 2.236766 CCGGACTGGGATACTACGAAT 58.763 52.381 0.00 0.00 0.00 3.34
163 164 1.064463 ACCGGACTGGGATACTACGAA 60.064 52.381 9.46 0.00 44.64 3.85
164 165 0.548031 ACCGGACTGGGATACTACGA 59.452 55.000 9.46 0.00 44.64 3.43
165 166 1.876156 GTACCGGACTGGGATACTACG 59.124 57.143 9.46 0.00 44.64 3.51
166 167 2.883386 CTGTACCGGACTGGGATACTAC 59.117 54.545 9.46 0.00 44.64 2.73
167 168 2.779430 TCTGTACCGGACTGGGATACTA 59.221 50.000 9.46 0.00 44.64 1.82
168 169 1.567649 TCTGTACCGGACTGGGATACT 59.432 52.381 9.46 0.00 44.64 2.12
169 170 1.955080 CTCTGTACCGGACTGGGATAC 59.045 57.143 9.46 0.00 44.64 2.24
170 171 1.567649 ACTCTGTACCGGACTGGGATA 59.432 52.381 9.46 0.00 44.64 2.59
171 172 0.335361 ACTCTGTACCGGACTGGGAT 59.665 55.000 9.46 0.00 44.64 3.85
172 173 0.994247 TACTCTGTACCGGACTGGGA 59.006 55.000 9.46 0.00 44.64 4.37
173 174 1.064906 TCTACTCTGTACCGGACTGGG 60.065 57.143 9.46 8.83 44.64 4.45
174 175 2.290464 CTCTACTCTGTACCGGACTGG 58.710 57.143 9.46 0.00 46.41 4.00
175 176 1.671845 GCTCTACTCTGTACCGGACTG 59.328 57.143 9.46 6.52 0.00 3.51
176 177 1.281287 TGCTCTACTCTGTACCGGACT 59.719 52.381 9.46 0.00 0.00 3.85
177 178 1.747709 TGCTCTACTCTGTACCGGAC 58.252 55.000 9.46 2.18 0.00 4.79
178 179 2.089980 GTTGCTCTACTCTGTACCGGA 58.910 52.381 9.46 0.00 0.00 5.14
179 180 1.134560 GGTTGCTCTACTCTGTACCGG 59.865 57.143 0.00 0.00 0.00 5.28
180 181 1.816835 TGGTTGCTCTACTCTGTACCG 59.183 52.381 0.00 0.00 0.00 4.02
181 182 3.786635 CATGGTTGCTCTACTCTGTACC 58.213 50.000 0.00 0.00 0.00 3.34
182 183 3.190874 GCATGGTTGCTCTACTCTGTAC 58.809 50.000 0.00 0.00 45.77 2.90
183 184 3.526931 GCATGGTTGCTCTACTCTGTA 57.473 47.619 0.00 0.00 45.77 2.74
184 185 2.393271 GCATGGTTGCTCTACTCTGT 57.607 50.000 0.00 0.00 45.77 3.41
195 196 2.137523 GTGCCTTGAAAAGCATGGTTG 58.862 47.619 11.56 0.00 44.44 3.77
196 197 2.036346 GAGTGCCTTGAAAAGCATGGTT 59.964 45.455 3.82 3.82 44.44 3.67
197 198 1.615392 GAGTGCCTTGAAAAGCATGGT 59.385 47.619 0.00 0.00 44.44 3.55
198 199 1.614903 TGAGTGCCTTGAAAAGCATGG 59.385 47.619 0.00 0.00 44.44 3.66
199 200 3.374220 TTGAGTGCCTTGAAAAGCATG 57.626 42.857 0.00 0.00 44.44 4.06
200 201 4.523943 TGTATTGAGTGCCTTGAAAAGCAT 59.476 37.500 0.00 0.00 44.44 3.79
201 202 3.888323 TGTATTGAGTGCCTTGAAAAGCA 59.112 39.130 0.00 0.00 44.44 3.91
202 203 4.503741 TGTATTGAGTGCCTTGAAAAGC 57.496 40.909 0.00 0.00 44.44 3.51
203 204 5.830912 TGTTGTATTGAGTGCCTTGAAAAG 58.169 37.500 0.00 0.00 45.69 2.27
204 205 5.735922 GCTGTTGTATTGAGTGCCTTGAAAA 60.736 40.000 0.00 0.00 0.00 2.29
205 206 4.261572 GCTGTTGTATTGAGTGCCTTGAAA 60.262 41.667 0.00 0.00 0.00 2.69
206 207 3.253188 GCTGTTGTATTGAGTGCCTTGAA 59.747 43.478 0.00 0.00 0.00 2.69
207 208 2.813754 GCTGTTGTATTGAGTGCCTTGA 59.186 45.455 0.00 0.00 0.00 3.02
208 209 2.095059 GGCTGTTGTATTGAGTGCCTTG 60.095 50.000 0.00 0.00 36.32 3.61
209 210 2.162681 GGCTGTTGTATTGAGTGCCTT 58.837 47.619 0.00 0.00 36.32 4.35
210 211 1.614317 GGGCTGTTGTATTGAGTGCCT 60.614 52.381 0.00 0.00 38.93 4.75
211 212 0.811281 GGGCTGTTGTATTGAGTGCC 59.189 55.000 0.00 0.00 38.28 5.01
212 213 1.470098 CTGGGCTGTTGTATTGAGTGC 59.530 52.381 0.00 0.00 0.00 4.40
213 214 2.086869 CCTGGGCTGTTGTATTGAGTG 58.913 52.381 0.00 0.00 0.00 3.51
214 215 1.705186 ACCTGGGCTGTTGTATTGAGT 59.295 47.619 0.00 0.00 0.00 3.41
215 216 2.496899 ACCTGGGCTGTTGTATTGAG 57.503 50.000 0.00 0.00 0.00 3.02
216 217 2.969821 AACCTGGGCTGTTGTATTGA 57.030 45.000 0.00 0.00 0.00 2.57
217 218 3.440173 CAGTAACCTGGGCTGTTGTATTG 59.560 47.826 0.00 0.00 34.90 1.90
218 219 3.073946 ACAGTAACCTGGGCTGTTGTATT 59.926 43.478 12.78 0.00 43.36 1.89
219 220 2.642807 ACAGTAACCTGGGCTGTTGTAT 59.357 45.455 12.78 0.00 43.36 2.29
220 221 2.051692 ACAGTAACCTGGGCTGTTGTA 58.948 47.619 12.78 0.00 43.36 2.41
221 222 0.843984 ACAGTAACCTGGGCTGTTGT 59.156 50.000 12.78 2.25 43.36 3.32
222 223 3.725754 ACAGTAACCTGGGCTGTTG 57.274 52.632 12.78 1.72 43.36 3.33
224 225 4.359105 TCTATAACAGTAACCTGGGCTGT 58.641 43.478 12.78 12.78 44.31 4.40
225 226 4.406003 ACTCTATAACAGTAACCTGGGCTG 59.594 45.833 11.75 11.75 43.36 4.85
226 227 4.406003 CACTCTATAACAGTAACCTGGGCT 59.594 45.833 0.00 0.00 43.36 5.19
227 228 4.404715 TCACTCTATAACAGTAACCTGGGC 59.595 45.833 0.00 0.00 43.36 5.36
228 229 6.154706 ACTTCACTCTATAACAGTAACCTGGG 59.845 42.308 0.00 0.00 43.36 4.45
229 230 7.036220 CACTTCACTCTATAACAGTAACCTGG 58.964 42.308 0.00 0.00 43.36 4.45
230 231 7.827701 TCACTTCACTCTATAACAGTAACCTG 58.172 38.462 0.00 0.00 44.68 4.00
231 232 7.363094 GCTCACTTCACTCTATAACAGTAACCT 60.363 40.741 0.00 0.00 0.00 3.50
232 233 6.752815 GCTCACTTCACTCTATAACAGTAACC 59.247 42.308 0.00 0.00 0.00 2.85
233 234 7.273815 GTGCTCACTTCACTCTATAACAGTAAC 59.726 40.741 0.00 0.00 0.00 2.50
234 235 7.313646 GTGCTCACTTCACTCTATAACAGTAA 58.686 38.462 0.00 0.00 0.00 2.24
235 236 6.127703 GGTGCTCACTTCACTCTATAACAGTA 60.128 42.308 0.00 0.00 34.97 2.74
236 237 5.336849 GGTGCTCACTTCACTCTATAACAGT 60.337 44.000 0.00 0.00 34.97 3.55
237 238 5.105752 GGTGCTCACTTCACTCTATAACAG 58.894 45.833 0.00 0.00 34.97 3.16
238 239 4.526650 TGGTGCTCACTTCACTCTATAACA 59.473 41.667 0.00 0.00 34.97 2.41
239 240 5.073311 TGGTGCTCACTTCACTCTATAAC 57.927 43.478 0.00 0.00 34.97 1.89
240 241 5.016831 TCTGGTGCTCACTTCACTCTATAA 58.983 41.667 0.00 0.00 34.97 0.98
241 242 4.600062 TCTGGTGCTCACTTCACTCTATA 58.400 43.478 0.00 0.00 34.97 1.31
242 243 3.435275 TCTGGTGCTCACTTCACTCTAT 58.565 45.455 0.00 0.00 34.97 1.98
243 244 2.822561 CTCTGGTGCTCACTTCACTCTA 59.177 50.000 0.00 0.00 34.97 2.43
244 245 1.617850 CTCTGGTGCTCACTTCACTCT 59.382 52.381 0.00 0.00 34.97 3.24
245 246 1.342819 ACTCTGGTGCTCACTTCACTC 59.657 52.381 0.00 0.00 34.97 3.51
246 247 1.342819 GACTCTGGTGCTCACTTCACT 59.657 52.381 0.00 0.00 34.97 3.41
247 248 1.789506 GACTCTGGTGCTCACTTCAC 58.210 55.000 0.00 0.00 0.00 3.18
248 249 0.315251 CGACTCTGGTGCTCACTTCA 59.685 55.000 0.00 0.00 0.00 3.02
249 250 0.315568 ACGACTCTGGTGCTCACTTC 59.684 55.000 0.00 0.00 0.00 3.01
250 251 0.315568 GACGACTCTGGTGCTCACTT 59.684 55.000 0.00 0.00 0.00 3.16
251 252 1.857318 CGACGACTCTGGTGCTCACT 61.857 60.000 0.00 0.00 0.00 3.41
252 253 1.442857 CGACGACTCTGGTGCTCAC 60.443 63.158 0.00 0.00 0.00 3.51
253 254 1.897137 ACGACGACTCTGGTGCTCA 60.897 57.895 0.00 0.00 0.00 4.26
254 255 1.442857 CACGACGACTCTGGTGCTC 60.443 63.158 0.00 0.00 0.00 4.26
255 256 1.735376 AACACGACGACTCTGGTGCT 61.735 55.000 0.00 0.00 33.81 4.40
256 257 1.276145 GAACACGACGACTCTGGTGC 61.276 60.000 0.00 0.00 33.81 5.01
257 258 0.311165 AGAACACGACGACTCTGGTG 59.689 55.000 0.00 0.00 36.50 4.17
258 259 0.592148 GAGAACACGACGACTCTGGT 59.408 55.000 0.00 0.00 0.00 4.00
259 260 0.591659 TGAGAACACGACGACTCTGG 59.408 55.000 0.00 0.00 0.00 3.86
260 261 2.620779 ATGAGAACACGACGACTCTG 57.379 50.000 0.00 0.00 0.00 3.35
261 262 6.432607 TTTATATGAGAACACGACGACTCT 57.567 37.500 0.00 0.00 0.00 3.24
262 263 6.910972 TCATTTATATGAGAACACGACGACTC 59.089 38.462 0.00 5.61 35.87 3.36
263 264 6.691818 GTCATTTATATGAGAACACGACGACT 59.308 38.462 0.00 0.00 41.33 4.18
264 265 6.471198 TGTCATTTATATGAGAACACGACGAC 59.529 38.462 0.00 0.00 41.33 4.34
265 266 6.557110 TGTCATTTATATGAGAACACGACGA 58.443 36.000 0.00 0.00 41.33 4.20
266 267 6.806120 TGTCATTTATATGAGAACACGACG 57.194 37.500 0.00 0.00 41.33 5.12
267 268 9.638300 GAATTGTCATTTATATGAGAACACGAC 57.362 33.333 7.70 0.00 44.05 4.34
268 269 8.826710 GGAATTGTCATTTATATGAGAACACGA 58.173 33.333 7.70 0.00 44.05 4.35
269 270 7.793888 CGGAATTGTCATTTATATGAGAACACG 59.206 37.037 7.70 8.75 44.05 4.49
270 271 8.612619 ACGGAATTGTCATTTATATGAGAACAC 58.387 33.333 7.70 5.69 44.05 3.32
271 272 8.611757 CACGGAATTGTCATTTATATGAGAACA 58.388 33.333 7.70 0.00 44.05 3.18
272 273 8.612619 ACACGGAATTGTCATTTATATGAGAAC 58.387 33.333 7.70 0.00 44.05 3.01
273 274 8.731275 ACACGGAATTGTCATTTATATGAGAA 57.269 30.769 7.93 7.93 44.95 2.87
274 275 8.731275 AACACGGAATTGTCATTTATATGAGA 57.269 30.769 0.00 0.00 41.33 3.27
275 276 9.787532 AAAACACGGAATTGTCATTTATATGAG 57.212 29.630 0.00 0.00 41.33 2.90
280 281 9.921637 ACATAAAAACACGGAATTGTCATTTAT 57.078 25.926 0.00 0.00 34.71 1.40
282 283 9.187455 GTACATAAAAACACGGAATTGTCATTT 57.813 29.630 0.00 0.00 0.00 2.32
283 284 7.535940 CGTACATAAAAACACGGAATTGTCATT 59.464 33.333 0.00 0.00 0.00 2.57
284 285 7.018826 CGTACATAAAAACACGGAATTGTCAT 58.981 34.615 0.00 0.00 0.00 3.06
285 286 6.364261 CGTACATAAAAACACGGAATTGTCA 58.636 36.000 0.00 0.00 0.00 3.58
286 287 5.282076 GCGTACATAAAAACACGGAATTGTC 59.718 40.000 0.00 0.00 35.04 3.18
287 288 5.148568 GCGTACATAAAAACACGGAATTGT 58.851 37.500 0.00 0.00 35.04 2.71
288 289 4.555747 GGCGTACATAAAAACACGGAATTG 59.444 41.667 0.00 0.00 35.04 2.32
289 290 4.379708 GGGCGTACATAAAAACACGGAATT 60.380 41.667 0.00 0.00 35.04 2.17
290 291 3.127376 GGGCGTACATAAAAACACGGAAT 59.873 43.478 0.00 0.00 35.04 3.01
291 292 2.483491 GGGCGTACATAAAAACACGGAA 59.517 45.455 0.00 0.00 35.04 4.30
292 293 2.075338 GGGCGTACATAAAAACACGGA 58.925 47.619 0.00 0.00 35.04 4.69
293 294 2.078392 AGGGCGTACATAAAAACACGG 58.922 47.619 0.00 0.00 35.04 4.94
294 295 3.817148 AAGGGCGTACATAAAAACACG 57.183 42.857 0.00 0.00 37.45 4.49
295 296 5.999721 TGTAAAGGGCGTACATAAAAACAC 58.000 37.500 0.00 0.00 0.00 3.32
296 297 6.630444 TTGTAAAGGGCGTACATAAAAACA 57.370 33.333 0.00 0.00 31.72 2.83
316 317 9.120538 ACACTGTCAGACATAATTTAAACTTGT 57.879 29.630 6.91 0.00 0.00 3.16
317 318 9.385902 CACACTGTCAGACATAATTTAAACTTG 57.614 33.333 6.91 0.00 0.00 3.16
318 319 9.120538 ACACACTGTCAGACATAATTTAAACTT 57.879 29.630 6.91 0.00 0.00 2.66
319 320 8.677148 ACACACTGTCAGACATAATTTAAACT 57.323 30.769 6.91 0.00 0.00 2.66
327 328 9.083080 CGAATAAATACACACTGTCAGACATAA 57.917 33.333 6.91 0.00 0.00 1.90
328 329 8.248253 ACGAATAAATACACACTGTCAGACATA 58.752 33.333 6.91 0.00 0.00 2.29
329 330 7.097192 ACGAATAAATACACACTGTCAGACAT 58.903 34.615 6.91 0.00 0.00 3.06
330 331 6.452242 ACGAATAAATACACACTGTCAGACA 58.548 36.000 6.91 2.48 0.00 3.41
331 332 6.946229 ACGAATAAATACACACTGTCAGAC 57.054 37.500 6.91 0.00 0.00 3.51
332 333 7.870954 AGAAACGAATAAATACACACTGTCAGA 59.129 33.333 6.91 0.00 0.00 3.27
333 334 8.018677 AGAAACGAATAAATACACACTGTCAG 57.981 34.615 0.00 0.00 0.00 3.51
334 335 7.956420 AGAAACGAATAAATACACACTGTCA 57.044 32.000 0.00 0.00 0.00 3.58
337 338 9.916397 GGATTAGAAACGAATAAATACACACTG 57.084 33.333 0.00 0.00 0.00 3.66
338 339 8.814235 CGGATTAGAAACGAATAAATACACACT 58.186 33.333 0.00 0.00 0.00 3.55
339 340 8.598075 ACGGATTAGAAACGAATAAATACACAC 58.402 33.333 0.00 0.00 0.00 3.82
340 341 8.706492 ACGGATTAGAAACGAATAAATACACA 57.294 30.769 0.00 0.00 0.00 3.72
341 342 8.810427 TGACGGATTAGAAACGAATAAATACAC 58.190 33.333 0.00 0.00 0.00 2.90
342 343 8.929827 TGACGGATTAGAAACGAATAAATACA 57.070 30.769 0.00 0.00 0.00 2.29
344 345 9.752961 TGATGACGGATTAGAAACGAATAAATA 57.247 29.630 0.00 0.00 0.00 1.40
345 346 8.657074 TGATGACGGATTAGAAACGAATAAAT 57.343 30.769 0.00 0.00 0.00 1.40
346 347 7.223971 CCTGATGACGGATTAGAAACGAATAAA 59.776 37.037 0.00 0.00 0.00 1.40
347 348 6.700081 CCTGATGACGGATTAGAAACGAATAA 59.300 38.462 0.00 0.00 0.00 1.40
348 349 6.213677 CCTGATGACGGATTAGAAACGAATA 58.786 40.000 0.00 0.00 0.00 1.75
349 350 5.050490 CCTGATGACGGATTAGAAACGAAT 58.950 41.667 0.00 0.00 0.00 3.34
350 351 4.430007 CCTGATGACGGATTAGAAACGAA 58.570 43.478 0.00 0.00 0.00 3.85
351 352 3.181479 CCCTGATGACGGATTAGAAACGA 60.181 47.826 0.00 0.00 0.00 3.85
352 353 3.123804 CCCTGATGACGGATTAGAAACG 58.876 50.000 0.00 0.00 0.00 3.60
353 354 3.871594 CACCCTGATGACGGATTAGAAAC 59.128 47.826 0.00 0.00 0.00 2.78
354 355 3.517901 ACACCCTGATGACGGATTAGAAA 59.482 43.478 0.00 0.00 0.00 2.52
355 356 3.104512 ACACCCTGATGACGGATTAGAA 58.895 45.455 0.00 0.00 0.00 2.10
356 357 2.430694 CACACCCTGATGACGGATTAGA 59.569 50.000 0.00 0.00 0.00 2.10
357 358 2.430694 TCACACCCTGATGACGGATTAG 59.569 50.000 0.00 0.00 0.00 1.73
358 359 2.167693 GTCACACCCTGATGACGGATTA 59.832 50.000 0.00 0.00 36.20 1.75
359 360 1.066143 GTCACACCCTGATGACGGATT 60.066 52.381 0.00 0.00 36.20 3.01
360 361 0.537188 GTCACACCCTGATGACGGAT 59.463 55.000 0.00 0.00 36.20 4.18
361 362 1.972198 GTCACACCCTGATGACGGA 59.028 57.895 0.00 0.00 36.20 4.69
362 363 4.598257 GTCACACCCTGATGACGG 57.402 61.111 0.00 0.00 36.20 4.79
364 365 2.417719 GTGAAGTCACACCCTGATGAC 58.582 52.381 6.57 0.00 45.75 3.06
365 366 2.839486 GTGAAGTCACACCCTGATGA 57.161 50.000 6.57 0.00 45.75 2.92
377 378 5.495640 AGAGAAGGAAATGGATGTGAAGTC 58.504 41.667 0.00 0.00 0.00 3.01
386 387 7.455008 ACACTAGAGTTTAGAGAAGGAAATGGA 59.545 37.037 0.00 0.00 0.00 3.41
396 397 6.236409 TCCGAGAAACACTAGAGTTTAGAGA 58.764 40.000 16.82 9.70 41.48 3.10
397 398 6.372103 TCTCCGAGAAACACTAGAGTTTAGAG 59.628 42.308 16.82 17.70 41.48 2.43
401 402 5.477291 TGATCTCCGAGAAACACTAGAGTTT 59.523 40.000 16.81 16.81 43.90 2.66
411 413 2.728839 GCGATCATGATCTCCGAGAAAC 59.271 50.000 28.48 4.20 35.72 2.78
424 426 2.270923 TGTTTCTTCCGAGCGATCATG 58.729 47.619 0.00 0.00 0.00 3.07
426 428 1.544246 TCTGTTTCTTCCGAGCGATCA 59.456 47.619 0.00 0.00 0.00 2.92
448 450 5.636121 CACAAAAAGTGGATCATCATTGGTG 59.364 40.000 0.00 0.00 44.69 4.17
449 451 5.786311 CACAAAAAGTGGATCATCATTGGT 58.214 37.500 0.00 0.00 44.69 3.67
464 466 4.788521 GCTCTAACCACGGTTCACAAAAAG 60.789 45.833 4.34 0.00 39.31 2.27
467 469 2.215196 GCTCTAACCACGGTTCACAAA 58.785 47.619 4.34 0.00 39.31 2.83
468 470 1.541670 GGCTCTAACCACGGTTCACAA 60.542 52.381 4.34 0.00 39.31 3.33
469 471 0.034337 GGCTCTAACCACGGTTCACA 59.966 55.000 4.34 0.00 39.31 3.58
470 472 0.320697 AGGCTCTAACCACGGTTCAC 59.679 55.000 4.34 0.00 39.31 3.18
472 474 0.606604 TCAGGCTCTAACCACGGTTC 59.393 55.000 4.34 0.00 39.31 3.62
474 476 1.207329 GATTCAGGCTCTAACCACGGT 59.793 52.381 0.00 0.00 0.00 4.83
475 477 1.473434 GGATTCAGGCTCTAACCACGG 60.473 57.143 0.00 0.00 0.00 4.94
476 478 1.482593 AGGATTCAGGCTCTAACCACG 59.517 52.381 0.00 0.00 0.00 4.94
479 481 2.769095 ACAGAGGATTCAGGCTCTAACC 59.231 50.000 0.00 0.00 0.00 2.85
481 483 5.710646 AGATACAGAGGATTCAGGCTCTAA 58.289 41.667 0.00 0.00 0.00 2.10
482 484 5.332106 AGATACAGAGGATTCAGGCTCTA 57.668 43.478 0.00 0.00 0.00 2.43
484 486 5.076873 AGTAGATACAGAGGATTCAGGCTC 58.923 45.833 0.00 0.00 0.00 4.70
485 487 5.073437 AGTAGATACAGAGGATTCAGGCT 57.927 43.478 0.00 0.00 0.00 4.58
486 488 5.510520 CCAAGTAGATACAGAGGATTCAGGC 60.511 48.000 0.00 0.00 0.00 4.85
487 489 5.835819 TCCAAGTAGATACAGAGGATTCAGG 59.164 44.000 0.00 0.00 0.00 3.86
488 490 6.516527 GCTCCAAGTAGATACAGAGGATTCAG 60.517 46.154 0.00 0.00 0.00 3.02
489 491 5.303078 GCTCCAAGTAGATACAGAGGATTCA 59.697 44.000 0.00 0.00 0.00 2.57
490 492 5.279256 GGCTCCAAGTAGATACAGAGGATTC 60.279 48.000 0.00 0.00 0.00 2.52
491 493 4.591072 GGCTCCAAGTAGATACAGAGGATT 59.409 45.833 0.00 0.00 0.00 3.01
492 494 4.156477 GGCTCCAAGTAGATACAGAGGAT 58.844 47.826 0.00 0.00 0.00 3.24
493 495 3.567397 GGCTCCAAGTAGATACAGAGGA 58.433 50.000 0.00 0.00 0.00 3.71
494 496 2.630580 GGGCTCCAAGTAGATACAGAGG 59.369 54.545 0.00 0.00 0.00 3.69
499 501 3.039011 TCAAGGGGCTCCAAGTAGATAC 58.961 50.000 4.79 0.00 34.83 2.24
502 504 1.276622 GTCAAGGGGCTCCAAGTAGA 58.723 55.000 4.79 0.00 34.83 2.59
503 505 0.984230 TGTCAAGGGGCTCCAAGTAG 59.016 55.000 4.79 0.00 34.83 2.57
504 506 0.690762 GTGTCAAGGGGCTCCAAGTA 59.309 55.000 4.79 0.00 34.83 2.24
505 507 1.456287 GTGTCAAGGGGCTCCAAGT 59.544 57.895 4.79 0.00 34.83 3.16
507 509 1.650242 TTGGTGTCAAGGGGCTCCAA 61.650 55.000 4.79 0.00 36.34 3.53
508 510 2.081787 TTGGTGTCAAGGGGCTCCA 61.082 57.895 4.79 0.00 34.83 3.86
509 511 1.603739 GTTGGTGTCAAGGGGCTCC 60.604 63.158 0.00 0.00 32.92 4.70
510 512 1.966451 CGTTGGTGTCAAGGGGCTC 60.966 63.158 0.00 0.00 35.72 4.70
511 513 1.779061 ATCGTTGGTGTCAAGGGGCT 61.779 55.000 0.00 0.00 38.76 5.19
512 514 0.893727 AATCGTTGGTGTCAAGGGGC 60.894 55.000 0.00 0.00 38.76 5.80
514 516 3.726291 AAAAATCGTTGGTGTCAAGGG 57.274 42.857 0.00 0.00 38.76 3.95
515 517 8.804688 TTTAATAAAAATCGTTGGTGTCAAGG 57.195 30.769 0.00 0.00 39.37 3.61
537 560 9.784531 GATTAGATTGGATCAGTGAAGGATTTA 57.215 33.333 0.00 0.00 0.00 1.40
553 576 6.316140 TCAGAAAATCACGGTGATTAGATTGG 59.684 38.462 30.49 19.43 45.57 3.16
564 587 5.766150 TGACATTTTCAGAAAATCACGGT 57.234 34.783 16.90 12.25 38.97 4.83
575 598 5.026462 GCAGATTGTCGATGACATTTTCAG 58.974 41.667 0.00 0.00 42.40 3.02
576 599 4.696877 AGCAGATTGTCGATGACATTTTCA 59.303 37.500 0.00 0.00 42.40 2.69
614 637 1.805945 GGCAACGGAGCGTGTCTAG 60.806 63.158 0.00 0.00 39.99 2.43
636 664 1.226018 GCGACGGCTCGAAAAATGG 60.226 57.895 9.91 0.00 43.06 3.16
666 694 2.150797 CGAATTCAGTTTCGCTCTGC 57.849 50.000 6.22 0.00 41.61 4.26
690 719 1.876416 GCCTGTCTGTGCGTTTCCTTA 60.876 52.381 0.00 0.00 0.00 2.69
692 721 1.598130 GCCTGTCTGTGCGTTTCCT 60.598 57.895 0.00 0.00 0.00 3.36
694 723 0.880278 TCTGCCTGTCTGTGCGTTTC 60.880 55.000 0.00 0.00 0.00 2.78
697 726 2.029666 GTCTGCCTGTCTGTGCGT 59.970 61.111 0.00 0.00 0.00 5.24
698 727 2.025969 CTGTCTGCCTGTCTGTGCG 61.026 63.158 0.00 0.00 0.00 5.34
699 728 2.323580 GCTGTCTGCCTGTCTGTGC 61.324 63.158 0.00 0.00 35.15 4.57
700 729 2.025969 CGCTGTCTGCCTGTCTGTG 61.026 63.158 0.00 0.00 38.78 3.66
701 730 2.341543 CGCTGTCTGCCTGTCTGT 59.658 61.111 0.00 0.00 38.78 3.41
702 731 2.433838 CCGCTGTCTGCCTGTCTG 60.434 66.667 0.00 0.00 38.78 3.51
703 732 3.699894 CCCGCTGTCTGCCTGTCT 61.700 66.667 0.00 0.00 38.78 3.41
704 733 4.767255 CCCCGCTGTCTGCCTGTC 62.767 72.222 0.00 0.00 38.78 3.51
751 783 0.179189 GCCGCCTGAAAATTCGTGAG 60.179 55.000 0.00 0.00 0.00 3.51
757 789 2.258286 GTGCGCCGCCTGAAAATT 59.742 55.556 6.63 0.00 0.00 1.82
865 901 4.421479 AGGAAGGCGACGCGTGAG 62.421 66.667 20.70 12.32 0.00 3.51
866 902 4.415332 GAGGAAGGCGACGCGTGA 62.415 66.667 20.70 0.00 0.00 4.35
1354 3905 1.194781 ACATGGCAGACTTCTCCCGT 61.195 55.000 0.00 0.00 0.00 5.28
1363 3921 4.256920 ACTGAACATAAGACATGGCAGAC 58.743 43.478 0.00 0.00 33.12 3.51
1364 3922 4.558226 ACTGAACATAAGACATGGCAGA 57.442 40.909 0.00 0.00 33.12 4.26
1415 3974 2.364972 TCTGCGATAGACAGATGGGA 57.635 50.000 0.00 0.00 41.80 4.37
1494 4055 2.666862 TCGCGGAATTTGCACGGT 60.667 55.556 6.13 0.00 0.00 4.83
1505 4066 2.104859 ATCTCGACGAACTCGCGGA 61.105 57.895 6.13 10.54 42.62 5.54
1534 4095 5.465724 ACTCAATCAAGAACGGACAGTAAAC 59.534 40.000 0.00 0.00 0.00 2.01
1540 4101 3.071023 AGGAACTCAATCAAGAACGGACA 59.929 43.478 0.00 0.00 0.00 4.02
1557 4118 4.356289 GAGATTCAGAGAAGCGTAGGAAC 58.644 47.826 0.00 0.00 0.00 3.62
1566 4127 2.419851 GCTGTGGGGAGATTCAGAGAAG 60.420 54.545 0.00 0.00 0.00 2.85
1567 4128 1.556911 GCTGTGGGGAGATTCAGAGAA 59.443 52.381 0.00 0.00 0.00 2.87
1591 4152 6.031751 ACTCTCCAGAGATTCAGTTAACAC 57.968 41.667 10.68 0.00 44.74 3.32
1644 4206 1.442526 CTATTTGAGCCCGGCTGCTG 61.443 60.000 19.21 0.26 42.95 4.41
1647 4272 0.815615 GGTCTATTTGAGCCCGGCTG 60.816 60.000 19.21 0.46 39.88 4.85
1672 4297 1.132500 GAAGCTATAGGTGGGCCTGT 58.868 55.000 4.96 0.00 46.47 4.00
1681 4306 1.140312 TGGGCCTTGGAAGCTATAGG 58.860 55.000 4.53 0.00 0.00 2.57
1686 4311 4.351054 CCGTGGGCCTTGGAAGCT 62.351 66.667 4.53 0.00 0.00 3.74
1781 4408 2.725641 GGTTTGGTTGGGTGTCGC 59.274 61.111 0.00 0.00 0.00 5.19
1815 4442 3.712016 ACTTTGTTGGTTGCCCTTTTT 57.288 38.095 0.00 0.00 0.00 1.94
1867 4494 2.444706 TGGGGAGAGGAGGATGCG 60.445 66.667 0.00 0.00 0.00 4.73
2095 4888 2.165301 CCGAACCCTAGCGCGAAAG 61.165 63.158 12.10 5.59 0.00 2.62
2097 4890 4.137872 CCCGAACCCTAGCGCGAA 62.138 66.667 12.10 0.00 0.00 4.70
2267 6045 1.080569 GAACAAGCCAATGCACGGG 60.081 57.895 6.15 3.68 41.13 5.28
2280 6058 4.994852 CCGAGACCAAATAGACAAGAACAA 59.005 41.667 0.00 0.00 0.00 2.83
2288 6066 1.801765 GCGGACCGAGACCAAATAGAC 60.802 57.143 20.50 0.00 0.00 2.59
2292 6070 1.079127 CAGCGGACCGAGACCAAAT 60.079 57.895 20.50 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.