Multiple sequence alignment - TraesCS1A01G287000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G287000 chr1A 100.000 2350 0 0 1 2350 483860634 483862983 0.000000e+00 4340.0
1 TraesCS1A01G287000 chr1A 88.406 69 7 1 1944 2011 460552359 460552291 5.380000e-12 82.4
2 TraesCS1A01G287000 chr1D 86.984 1114 80 36 611 1695 384125755 384126832 0.000000e+00 1194.0
3 TraesCS1A01G287000 chr1D 87.135 513 37 17 1 500 384125206 384125702 2.640000e-154 555.0
4 TraesCS1A01G287000 chr1D 88.724 337 34 3 2015 2350 384127267 384127600 2.170000e-110 409.0
5 TraesCS1A01G287000 chr1D 89.130 92 2 4 1740 1824 384127182 384127272 8.880000e-20 108.0
6 TraesCS1A01G287000 chr1B 87.160 1067 86 23 597 1651 515050441 515051468 0.000000e+00 1164.0
7 TraesCS1A01G287000 chr1B 93.061 245 15 1 125 367 515050049 515050293 7.990000e-95 357.0
8 TraesCS1A01G287000 chr1B 89.147 129 10 1 1698 1822 515071182 515071310 8.690000e-35 158.0
9 TraesCS1A01G287000 chr7A 91.935 62 5 0 1950 2011 681096991 681096930 1.160000e-13 87.9
10 TraesCS1A01G287000 chr2B 91.803 61 5 0 1951 2011 413078821 413078761 4.160000e-13 86.1
11 TraesCS1A01G287000 chr5A 88.406 69 7 1 1944 2011 680361335 680361403 5.380000e-12 82.4
12 TraesCS1A01G287000 chr5A 87.324 71 8 1 1942 2011 608875140 608875070 1.940000e-11 80.5
13 TraesCS1A01G287000 chr5A 87.324 71 8 1 1942 2011 704999957 704999887 1.940000e-11 80.5
14 TraesCS1A01G287000 chr3A 88.406 69 7 1 1944 2011 89665098 89665030 5.380000e-12 82.4
15 TraesCS1A01G287000 chr3A 87.324 71 8 1 1942 2011 715173519 715173589 1.940000e-11 80.5
16 TraesCS1A01G287000 chr4A 86.957 69 8 1 1944 2011 216015469 216015401 2.500000e-10 76.8
17 TraesCS1A01G287000 chr4A 86.275 51 7 0 550 600 41966288 41966338 3.260000e-04 56.5
18 TraesCS1A01G287000 chr5D 97.297 37 1 0 574 610 482108149 482108113 1.950000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G287000 chr1A 483860634 483862983 2349 False 4340.0 4340 100.00000 1 2350 1 chr1A.!!$F1 2349
1 TraesCS1A01G287000 chr1D 384125206 384127600 2394 False 566.5 1194 87.99325 1 2350 4 chr1D.!!$F1 2349
2 TraesCS1A01G287000 chr1B 515050049 515051468 1419 False 760.5 1164 90.11050 125 1651 2 chr1B.!!$F2 1526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
752 775 0.251634 TATGACTCGTGGCAATGGCA 59.748 50.0 5.05 5.05 43.71 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 2146 0.030501 ATCCGACCACCCAATCCCTA 60.031 55.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.931005 GGCGCAAACTAATCGGAGAG 59.069 55.000 10.83 0.00 43.63 3.20
74 75 7.435192 CCATAGAAATTTCCGCTGTTTTATTCC 59.565 37.037 14.61 0.00 0.00 3.01
96 97 2.126031 GGAACTGCCGGACTCGAC 60.126 66.667 5.05 0.00 39.00 4.20
116 117 4.023279 CGACAGGATAAGGACTGATCTCTG 60.023 50.000 10.91 10.91 38.09 3.35
118 119 5.276440 ACAGGATAAGGACTGATCTCTGTT 58.724 41.667 11.77 2.49 38.09 3.16
127 130 4.097892 GGACTGATCTCTGTTTCTCTCTCC 59.902 50.000 0.00 0.00 0.00 3.71
200 203 2.223294 CCTTGTTAAAACGTTGTCGCCA 60.223 45.455 0.00 0.00 41.18 5.69
242 245 2.207229 TACAGGGCTGTCAGTGCGT 61.207 57.895 0.93 0.00 43.74 5.24
243 246 2.434658 TACAGGGCTGTCAGTGCGTG 62.435 60.000 0.93 0.00 43.74 5.34
244 247 4.996434 AGGGCTGTCAGTGCGTGC 62.996 66.667 0.93 0.00 0.00 5.34
317 326 1.530293 GCTGCAATATCTCTTCCTGCG 59.470 52.381 0.00 0.00 35.76 5.18
371 382 4.202050 GCAGCAACTGAATTTATAGGTGGG 60.202 45.833 0.00 0.00 32.30 4.61
373 384 3.699038 GCAACTGAATTTATAGGTGGGCA 59.301 43.478 5.77 0.00 32.30 5.36
375 386 3.555966 ACTGAATTTATAGGTGGGCAGC 58.444 45.455 0.00 0.00 0.00 5.25
376 387 3.053693 ACTGAATTTATAGGTGGGCAGCA 60.054 43.478 0.00 0.00 0.00 4.41
377 388 3.554934 TGAATTTATAGGTGGGCAGCAG 58.445 45.455 0.00 0.00 0.00 4.24
378 389 2.664402 ATTTATAGGTGGGCAGCAGG 57.336 50.000 0.00 0.00 0.00 4.85
379 390 0.550914 TTTATAGGTGGGCAGCAGGG 59.449 55.000 0.00 0.00 0.00 4.45
380 391 1.994885 TTATAGGTGGGCAGCAGGGC 61.995 60.000 0.00 0.00 42.44 5.19
389 400 4.437587 CAGCAGGGCAGGGAAGGG 62.438 72.222 0.00 0.00 0.00 3.95
400 411 1.690985 GGGAAGGGCAGGAGTAGCT 60.691 63.158 0.00 0.00 0.00 3.32
410 424 6.264528 AGGGCAGGAGTAGCTATTATATTGA 58.735 40.000 0.00 0.00 0.00 2.57
442 456 8.726836 CAAAACATTTCTTGATTTTTCGCAAAG 58.273 29.630 0.00 0.00 28.73 2.77
444 458 7.165427 ACATTTCTTGATTTTTCGCAAAGAC 57.835 32.000 0.00 0.00 0.00 3.01
445 459 6.200854 ACATTTCTTGATTTTTCGCAAAGACC 59.799 34.615 0.00 0.00 0.00 3.85
448 466 3.363341 TGATTTTTCGCAAAGACCCAC 57.637 42.857 0.00 0.00 0.00 4.61
457 475 2.160417 CGCAAAGACCCACTTCTTGATC 59.840 50.000 0.00 0.00 37.93 2.92
470 488 4.349048 ACTTCTTGATCATATGCTGGGCTA 59.651 41.667 0.00 0.00 0.00 3.93
477 495 7.860649 TGATCATATGCTGGGCTATATATCA 57.139 36.000 0.00 0.00 0.00 2.15
478 496 7.904205 TGATCATATGCTGGGCTATATATCAG 58.096 38.462 0.00 0.00 0.00 2.90
479 497 7.511714 TGATCATATGCTGGGCTATATATCAGT 59.488 37.037 0.00 0.00 0.00 3.41
480 498 8.962912 ATCATATGCTGGGCTATATATCAGTA 57.037 34.615 0.00 0.00 0.00 2.74
494 515 2.570415 TCAGTACCCCGCAAAAATGA 57.430 45.000 0.00 0.00 0.00 2.57
500 521 1.275010 ACCCCGCAAAAATGATGAACC 59.725 47.619 0.00 0.00 0.00 3.62
503 524 2.417243 CCCGCAAAAATGATGAACCCTC 60.417 50.000 0.00 0.00 0.00 4.30
505 526 2.731968 CGCAAAAATGATGAACCCTCCG 60.732 50.000 0.00 0.00 0.00 4.63
507 528 3.673323 GCAAAAATGATGAACCCTCCGTC 60.673 47.826 0.00 0.00 0.00 4.79
509 530 0.546598 AATGATGAACCCTCCGTCCC 59.453 55.000 0.00 0.00 0.00 4.46
510 531 0.620410 ATGATGAACCCTCCGTCCCA 60.620 55.000 0.00 0.00 0.00 4.37
511 532 0.838554 TGATGAACCCTCCGTCCCAA 60.839 55.000 0.00 0.00 0.00 4.12
512 533 0.326927 GATGAACCCTCCGTCCCAAA 59.673 55.000 0.00 0.00 0.00 3.28
513 534 0.774908 ATGAACCCTCCGTCCCAAAA 59.225 50.000 0.00 0.00 0.00 2.44
514 535 0.774908 TGAACCCTCCGTCCCAAAAT 59.225 50.000 0.00 0.00 0.00 1.82
515 536 1.986631 TGAACCCTCCGTCCCAAAATA 59.013 47.619 0.00 0.00 0.00 1.40
516 537 2.375845 TGAACCCTCCGTCCCAAAATAA 59.624 45.455 0.00 0.00 0.00 1.40
517 538 2.801077 ACCCTCCGTCCCAAAATAAG 57.199 50.000 0.00 0.00 0.00 1.73
518 539 1.990327 ACCCTCCGTCCCAAAATAAGT 59.010 47.619 0.00 0.00 0.00 2.24
519 540 3.183801 ACCCTCCGTCCCAAAATAAGTA 58.816 45.455 0.00 0.00 0.00 2.24
520 541 3.588396 ACCCTCCGTCCCAAAATAAGTAA 59.412 43.478 0.00 0.00 0.00 2.24
521 542 3.943381 CCCTCCGTCCCAAAATAAGTAAC 59.057 47.826 0.00 0.00 0.00 2.50
522 543 4.324022 CCCTCCGTCCCAAAATAAGTAACT 60.324 45.833 0.00 0.00 0.00 2.24
523 544 4.874396 CCTCCGTCCCAAAATAAGTAACTC 59.126 45.833 0.00 0.00 0.00 3.01
524 545 5.484715 CTCCGTCCCAAAATAAGTAACTCA 58.515 41.667 0.00 0.00 0.00 3.41
525 546 5.867330 TCCGTCCCAAAATAAGTAACTCAA 58.133 37.500 0.00 0.00 0.00 3.02
526 547 6.478129 TCCGTCCCAAAATAAGTAACTCAAT 58.522 36.000 0.00 0.00 0.00 2.57
527 548 6.943718 TCCGTCCCAAAATAAGTAACTCAATT 59.056 34.615 0.00 0.00 0.00 2.32
528 549 7.449086 TCCGTCCCAAAATAAGTAACTCAATTT 59.551 33.333 0.00 0.00 0.00 1.82
529 550 8.085909 CCGTCCCAAAATAAGTAACTCAATTTT 58.914 33.333 0.00 0.00 33.07 1.82
530 551 8.911662 CGTCCCAAAATAAGTAACTCAATTTTG 58.088 33.333 15.99 15.99 43.77 2.44
531 552 9.758651 GTCCCAAAATAAGTAACTCAATTTTGT 57.241 29.630 18.90 0.00 43.14 2.83
586 608 9.554395 TGTAACATTGACTCACTTATTTTGAGA 57.446 29.630 6.37 0.00 42.81 3.27
587 609 9.813080 GTAACATTGACTCACTTATTTTGAGAC 57.187 33.333 6.37 1.05 42.81 3.36
588 610 7.121974 ACATTGACTCACTTATTTTGAGACG 57.878 36.000 6.37 0.00 42.81 4.18
589 611 6.929049 ACATTGACTCACTTATTTTGAGACGA 59.071 34.615 6.37 0.85 42.81 4.20
590 612 7.441157 ACATTGACTCACTTATTTTGAGACGAA 59.559 33.333 6.37 0.00 42.81 3.85
591 613 7.408132 TTGACTCACTTATTTTGAGACGAAG 57.592 36.000 6.37 0.00 42.81 3.79
592 614 5.926542 TGACTCACTTATTTTGAGACGAAGG 59.073 40.000 6.37 0.00 42.81 3.46
593 615 5.238583 ACTCACTTATTTTGAGACGAAGGG 58.761 41.667 6.37 0.00 42.81 3.95
594 616 5.011738 ACTCACTTATTTTGAGACGAAGGGA 59.988 40.000 6.37 0.00 42.81 4.20
595 617 5.479306 TCACTTATTTTGAGACGAAGGGAG 58.521 41.667 0.00 0.00 0.00 4.30
596 618 5.011738 TCACTTATTTTGAGACGAAGGGAGT 59.988 40.000 0.00 0.00 0.00 3.85
597 619 6.209986 TCACTTATTTTGAGACGAAGGGAGTA 59.790 38.462 0.00 0.00 0.00 2.59
598 620 7.042335 CACTTATTTTGAGACGAAGGGAGTAT 58.958 38.462 0.00 0.00 0.00 2.12
599 621 7.010552 CACTTATTTTGAGACGAAGGGAGTATG 59.989 40.741 0.00 0.00 0.00 2.39
600 622 5.677319 ATTTTGAGACGAAGGGAGTATGA 57.323 39.130 0.00 0.00 0.00 2.15
601 623 5.477607 TTTTGAGACGAAGGGAGTATGAA 57.522 39.130 0.00 0.00 0.00 2.57
602 624 5.677319 TTTGAGACGAAGGGAGTATGAAT 57.323 39.130 0.00 0.00 0.00 2.57
603 625 5.677319 TTGAGACGAAGGGAGTATGAATT 57.323 39.130 0.00 0.00 0.00 2.17
604 626 6.785337 TTGAGACGAAGGGAGTATGAATTA 57.215 37.500 0.00 0.00 0.00 1.40
609 631 9.110502 GAGACGAAGGGAGTATGAATTATTTTT 57.889 33.333 0.00 0.00 0.00 1.94
643 665 7.872483 ACTAAAGCATATGTTTTGAAGGTTTGG 59.128 33.333 23.19 9.08 33.27 3.28
648 670 6.818142 GCATATGTTTTGAAGGTTTGGCTATT 59.182 34.615 4.29 0.00 0.00 1.73
650 672 9.301153 CATATGTTTTGAAGGTTTGGCTATTAC 57.699 33.333 0.00 0.00 0.00 1.89
652 674 7.113658 TGTTTTGAAGGTTTGGCTATTACAA 57.886 32.000 0.00 0.00 0.00 2.41
654 676 6.969993 TTTGAAGGTTTGGCTATTACAAGT 57.030 33.333 0.00 0.00 0.00 3.16
658 680 6.719370 TGAAGGTTTGGCTATTACAAGTCAAT 59.281 34.615 0.00 0.00 40.57 2.57
659 681 6.515272 AGGTTTGGCTATTACAAGTCAATG 57.485 37.500 0.00 0.00 40.57 2.82
660 682 6.010219 AGGTTTGGCTATTACAAGTCAATGT 58.990 36.000 0.00 0.00 40.57 2.71
661 683 6.493458 AGGTTTGGCTATTACAAGTCAATGTT 59.507 34.615 0.00 0.00 40.57 2.71
662 684 6.586082 GGTTTGGCTATTACAAGTCAATGTTG 59.414 38.462 0.00 0.00 40.57 3.33
663 685 6.892658 TTGGCTATTACAAGTCAATGTTGT 57.107 33.333 0.00 0.00 36.21 3.32
664 686 6.892658 TGGCTATTACAAGTCAATGTTGTT 57.107 33.333 0.00 0.00 38.98 2.83
665 687 7.283625 TGGCTATTACAAGTCAATGTTGTTT 57.716 32.000 0.00 0.00 38.98 2.83
672 694 5.971763 ACAAGTCAATGTTGTTTTTGGCTA 58.028 33.333 0.00 0.00 36.81 3.93
675 697 6.403866 AGTCAATGTTGTTTTTGGCTATGA 57.596 33.333 0.00 0.00 36.09 2.15
681 704 5.753744 TGTTGTTTTTGGCTATGAGTTACG 58.246 37.500 0.00 0.00 0.00 3.18
693 716 5.701290 GCTATGAGTTACGCCTATTTCCAAT 59.299 40.000 0.00 0.00 0.00 3.16
701 724 4.585879 ACGCCTATTTCCAATTGTACAGT 58.414 39.130 4.43 0.00 0.00 3.55
704 727 5.583061 CGCCTATTTCCAATTGTACAGTACA 59.417 40.000 9.51 9.51 36.79 2.90
752 775 0.251634 TATGACTCGTGGCAATGGCA 59.748 50.000 5.05 5.05 43.71 4.92
776 799 0.886490 GGCACCCGCTCCATTCTATG 60.886 60.000 0.00 0.00 38.60 2.23
791 814 7.845037 TCCATTCTATGATATGAGATGGACAC 58.155 38.462 0.00 0.00 30.78 3.67
793 816 7.363268 CCATTCTATGATATGAGATGGACACGA 60.363 40.741 0.00 0.00 0.00 4.35
803 826 6.132791 TGAGATGGACACGATAACTAACTC 57.867 41.667 0.00 0.00 0.00 3.01
811 834 6.165659 ACACGATAACTAACTCATGTTTGC 57.834 37.500 0.00 0.00 37.59 3.68
825 848 7.370383 ACTCATGTTTGCGATAATTGTTTCTT 58.630 30.769 0.00 0.00 0.00 2.52
827 850 5.820926 TGTTTGCGATAATTGTTTCTTGC 57.179 34.783 0.00 0.00 0.00 4.01
831 854 4.155449 TGCGATAATTGTTTCTTGCGAAC 58.845 39.130 0.00 0.00 0.00 3.95
846 869 7.482654 TCTTGCGAACAATGGAAATATCTAG 57.517 36.000 0.00 0.00 34.61 2.43
847 870 7.047891 TCTTGCGAACAATGGAAATATCTAGT 58.952 34.615 0.00 0.00 34.61 2.57
848 871 8.201464 TCTTGCGAACAATGGAAATATCTAGTA 58.799 33.333 0.00 0.00 34.61 1.82
849 872 7.709269 TGCGAACAATGGAAATATCTAGTAC 57.291 36.000 0.00 0.00 0.00 2.73
850 873 7.497595 TGCGAACAATGGAAATATCTAGTACT 58.502 34.615 0.00 0.00 0.00 2.73
851 874 7.438160 TGCGAACAATGGAAATATCTAGTACTG 59.562 37.037 5.39 0.00 0.00 2.74
852 875 7.095607 GCGAACAATGGAAATATCTAGTACTGG 60.096 40.741 5.39 1.87 0.00 4.00
881 904 2.481795 CCAGGTGAAGCCAAAACAGTTG 60.482 50.000 0.00 0.00 40.61 3.16
894 917 6.259829 GCCAAAACAGTTGGTTAATGATGTTT 59.740 34.615 6.95 0.00 41.28 2.83
895 918 7.201688 GCCAAAACAGTTGGTTAATGATGTTTT 60.202 33.333 6.95 7.76 46.23 2.43
921 944 6.485171 TCTCCTCCAAGAAAAGGGAAATTAG 58.515 40.000 0.00 0.00 33.21 1.73
925 948 5.016831 TCCAAGAAAAGGGAAATTAGCTCC 58.983 41.667 0.00 0.00 0.00 4.70
951 974 4.629523 TCACCGGCCGTCCAAACC 62.630 66.667 26.12 0.00 0.00 3.27
986 1010 0.608640 ATATAAAGCCTCCGCCTCCG 59.391 55.000 0.00 0.00 34.57 4.63
1001 1025 2.186384 CCGCTGCTCTCTTCCCAG 59.814 66.667 0.00 0.00 0.00 4.45
1023 1047 1.341482 ACAACACCATCACCCACACAA 60.341 47.619 0.00 0.00 0.00 3.33
1034 1058 2.024022 CACACAAACACACGGCCG 59.976 61.111 26.86 26.86 0.00 6.13
1036 1060 1.745864 ACACAAACACACGGCCGAA 60.746 52.632 35.90 0.00 0.00 4.30
1039 1063 2.515057 AAACACACGGCCGAAGCA 60.515 55.556 35.90 0.00 42.56 3.91
1314 1347 1.950216 TCGAGATGATCAAGGAGGACG 59.050 52.381 0.00 0.00 0.00 4.79
1340 1373 3.262420 CGGCTACAGCAACTACAAGATT 58.738 45.455 3.24 0.00 44.36 2.40
1357 1390 1.801178 GATTGGCGCCTAGATTAGTGC 59.199 52.381 29.70 3.24 0.00 4.40
1359 1392 1.334384 TGGCGCCTAGATTAGTGCCA 61.334 55.000 29.70 16.97 46.58 4.92
1360 1393 0.880718 GGCGCCTAGATTAGTGCCAC 60.881 60.000 22.15 0.00 42.03 5.01
1428 1464 2.000754 TTCGTAATACGTGCGTGCGC 62.001 55.000 12.78 9.85 43.14 6.09
1490 1534 4.112341 CGGCTGAGCTTTGCTGCC 62.112 66.667 3.72 10.68 42.12 4.85
1535 1580 3.649986 GCGTGCTGGTTCGTTGCT 61.650 61.111 0.00 0.00 0.00 3.91
1651 1702 5.689383 TGCGAGTTTAAAGCTCTTCAAAT 57.311 34.783 12.75 0.00 0.00 2.32
1653 1704 7.197071 TGCGAGTTTAAAGCTCTTCAAATTA 57.803 32.000 12.75 0.00 0.00 1.40
1655 1706 7.041372 TGCGAGTTTAAAGCTCTTCAAATTACT 60.041 33.333 12.75 0.00 0.00 2.24
1663 1714 6.934048 AGCTCTTCAAATTACTAATCCTGC 57.066 37.500 0.00 0.00 0.00 4.85
1664 1715 5.525378 AGCTCTTCAAATTACTAATCCTGCG 59.475 40.000 0.00 0.00 0.00 5.18
1667 1718 6.170506 TCTTCAAATTACTAATCCTGCGTGT 58.829 36.000 0.00 0.00 0.00 4.49
1668 1719 7.324935 TCTTCAAATTACTAATCCTGCGTGTA 58.675 34.615 0.00 0.00 0.00 2.90
1669 1720 7.985184 TCTTCAAATTACTAATCCTGCGTGTAT 59.015 33.333 0.00 0.00 0.00 2.29
1670 1721 7.709269 TCAAATTACTAATCCTGCGTGTATC 57.291 36.000 0.00 0.00 0.00 2.24
1671 1722 7.497595 TCAAATTACTAATCCTGCGTGTATCT 58.502 34.615 0.00 0.00 0.00 1.98
1672 1723 7.438160 TCAAATTACTAATCCTGCGTGTATCTG 59.562 37.037 0.00 0.00 0.00 2.90
1673 1724 6.650427 ATTACTAATCCTGCGTGTATCTGA 57.350 37.500 0.00 0.00 0.00 3.27
1695 1746 5.300034 TGATGATGATGTTTCACCATTAGCC 59.700 40.000 0.00 0.00 36.15 3.93
1696 1747 4.858850 TGATGATGTTTCACCATTAGCCT 58.141 39.130 0.00 0.00 33.85 4.58
1697 1748 5.263599 TGATGATGTTTCACCATTAGCCTT 58.736 37.500 0.00 0.00 33.85 4.35
1698 1749 5.125900 TGATGATGTTTCACCATTAGCCTTG 59.874 40.000 0.00 0.00 33.85 3.61
1699 1750 3.193267 TGATGTTTCACCATTAGCCTTGC 59.807 43.478 0.00 0.00 0.00 4.01
1714 1848 4.013050 AGCCTTGCTCCTAAAATGTCTTC 58.987 43.478 0.00 0.00 30.62 2.87
1715 1849 3.181506 GCCTTGCTCCTAAAATGTCTTCG 60.182 47.826 0.00 0.00 0.00 3.79
1719 1853 5.356882 TGCTCCTAAAATGTCTTCGTTTG 57.643 39.130 0.00 0.00 33.67 2.93
1720 1854 4.819630 TGCTCCTAAAATGTCTTCGTTTGT 59.180 37.500 0.00 0.00 33.67 2.83
1723 1857 6.142320 GCTCCTAAAATGTCTTCGTTTGTTTG 59.858 38.462 0.00 0.00 33.67 2.93
1724 1858 5.974751 TCCTAAAATGTCTTCGTTTGTTTGC 59.025 36.000 0.00 0.00 33.67 3.68
1726 1860 5.701029 AAAATGTCTTCGTTTGTTTGCTG 57.299 34.783 0.00 0.00 33.67 4.41
1727 1861 2.842208 TGTCTTCGTTTGTTTGCTGG 57.158 45.000 0.00 0.00 0.00 4.85
1728 1862 1.202245 TGTCTTCGTTTGTTTGCTGGC 60.202 47.619 0.00 0.00 0.00 4.85
1731 1865 2.343163 TTCGTTTGTTTGCTGGCCCG 62.343 55.000 0.00 0.00 0.00 6.13
1732 1866 2.661537 GTTTGTTTGCTGGCCCGC 60.662 61.111 12.95 12.95 0.00 6.13
1733 1867 3.150335 TTTGTTTGCTGGCCCGCA 61.150 55.556 18.91 18.91 38.31 5.69
1734 1868 3.149338 TTTGTTTGCTGGCCCGCAG 62.149 57.895 21.64 2.71 41.55 5.18
1735 1869 4.892965 TGTTTGCTGGCCCGCAGT 62.893 61.111 21.64 0.00 41.55 4.40
1738 1872 4.892965 TTGCTGGCCCGCAGTTGT 62.893 61.111 21.64 0.00 41.55 3.32
1793 2149 4.974399 GATTAGGATCCAACCAACCTAGG 58.026 47.826 15.82 7.41 36.55 3.02
1794 2150 1.596496 AGGATCCAACCAACCTAGGG 58.404 55.000 15.82 0.00 0.00 3.53
1795 2151 1.082194 AGGATCCAACCAACCTAGGGA 59.918 52.381 15.82 0.00 0.00 4.20
1796 2152 2.136026 GGATCCAACCAACCTAGGGAT 58.864 52.381 14.81 3.84 40.92 3.85
1797 2153 2.514160 GGATCCAACCAACCTAGGGATT 59.486 50.000 14.81 0.00 38.43 3.01
1798 2154 3.555966 GATCCAACCAACCTAGGGATTG 58.444 50.000 14.81 9.41 38.43 2.67
1805 2167 1.064685 CAACCTAGGGATTGGGTGGTC 60.065 57.143 14.81 0.00 40.24 4.02
1823 2185 0.252789 TCGGATCAACCCAACCCCTA 60.253 55.000 0.00 0.00 34.64 3.53
1824 2186 0.843984 CGGATCAACCCAACCCCTAT 59.156 55.000 0.00 0.00 34.64 2.57
1825 2187 2.051692 CGGATCAACCCAACCCCTATA 58.948 52.381 0.00 0.00 34.64 1.31
1826 2188 2.038557 CGGATCAACCCAACCCCTATAG 59.961 54.545 0.00 0.00 34.64 1.31
1827 2189 2.224793 GGATCAACCCAACCCCTATAGC 60.225 54.545 0.00 0.00 0.00 2.97
1828 2190 1.218844 TCAACCCAACCCCTATAGCC 58.781 55.000 0.00 0.00 0.00 3.93
1829 2191 1.222567 CAACCCAACCCCTATAGCCT 58.777 55.000 0.00 0.00 0.00 4.58
1830 2192 2.021837 TCAACCCAACCCCTATAGCCTA 60.022 50.000 0.00 0.00 0.00 3.93
1831 2193 2.986728 CAACCCAACCCCTATAGCCTAT 59.013 50.000 0.00 0.00 0.00 2.57
1832 2194 3.378807 ACCCAACCCCTATAGCCTATT 57.621 47.619 0.00 0.00 0.00 1.73
1833 2195 3.688196 ACCCAACCCCTATAGCCTATTT 58.312 45.455 0.00 0.00 0.00 1.40
1834 2196 3.397955 ACCCAACCCCTATAGCCTATTTG 59.602 47.826 0.00 0.00 0.00 2.32
1835 2197 3.245264 CCCAACCCCTATAGCCTATTTGG 60.245 52.174 5.49 5.49 39.35 3.28
1836 2198 3.397955 CCAACCCCTATAGCCTATTTGGT 59.602 47.826 4.59 0.48 38.35 3.67
1837 2199 4.600111 CCAACCCCTATAGCCTATTTGGTA 59.400 45.833 4.59 0.00 38.35 3.25
1838 2200 5.073965 CCAACCCCTATAGCCTATTTGGTAA 59.926 44.000 4.59 0.00 38.35 2.85
1839 2201 6.411086 CCAACCCCTATAGCCTATTTGGTAAA 60.411 42.308 4.59 0.00 38.35 2.01
1840 2202 6.196918 ACCCCTATAGCCTATTTGGTAAAC 57.803 41.667 0.00 0.00 38.35 2.01
1841 2203 5.673113 ACCCCTATAGCCTATTTGGTAAACA 59.327 40.000 0.00 0.00 38.35 2.83
1842 2204 6.002082 CCCCTATAGCCTATTTGGTAAACAC 58.998 44.000 0.00 0.00 38.35 3.32
1843 2205 6.183361 CCCCTATAGCCTATTTGGTAAACACT 60.183 42.308 0.00 0.00 38.35 3.55
1844 2206 6.935208 CCCTATAGCCTATTTGGTAAACACTC 59.065 42.308 0.00 0.00 38.35 3.51
1845 2207 6.645415 CCTATAGCCTATTTGGTAAACACTCG 59.355 42.308 0.00 0.00 38.35 4.18
1846 2208 3.606687 AGCCTATTTGGTAAACACTCGG 58.393 45.455 0.00 0.00 38.35 4.63
1847 2209 2.681344 GCCTATTTGGTAAACACTCGGG 59.319 50.000 0.00 0.00 38.35 5.14
1848 2210 2.681344 CCTATTTGGTAAACACTCGGGC 59.319 50.000 0.00 0.00 0.00 6.13
1849 2211 2.279935 ATTTGGTAAACACTCGGGCA 57.720 45.000 0.00 0.00 0.00 5.36
1850 2212 2.054232 TTTGGTAAACACTCGGGCAA 57.946 45.000 0.00 0.00 0.00 4.52
1851 2213 1.600023 TTGGTAAACACTCGGGCAAG 58.400 50.000 0.00 0.00 0.00 4.01
1852 2214 0.250553 TGGTAAACACTCGGGCAAGG 60.251 55.000 0.00 0.00 0.00 3.61
1853 2215 0.035739 GGTAAACACTCGGGCAAGGA 59.964 55.000 0.00 0.00 0.00 3.36
1854 2216 1.543871 GGTAAACACTCGGGCAAGGAA 60.544 52.381 0.00 0.00 0.00 3.36
1855 2217 2.223745 GTAAACACTCGGGCAAGGAAA 58.776 47.619 0.00 0.00 0.00 3.13
1856 2218 1.995376 AAACACTCGGGCAAGGAAAT 58.005 45.000 0.00 0.00 0.00 2.17
1857 2219 1.247567 AACACTCGGGCAAGGAAATG 58.752 50.000 0.00 0.00 0.00 2.32
1858 2220 1.244019 ACACTCGGGCAAGGAAATGC 61.244 55.000 0.00 0.00 45.67 3.56
1866 2228 1.063031 GCAAGGAAATGCGAGTTTGC 58.937 50.000 0.00 0.00 36.45 3.68
1873 2235 3.431055 TGCGAGTTTGCACAAGGG 58.569 55.556 0.00 0.00 40.62 3.95
1874 2236 1.453015 TGCGAGTTTGCACAAGGGT 60.453 52.632 0.00 0.00 40.62 4.34
1875 2237 1.034838 TGCGAGTTTGCACAAGGGTT 61.035 50.000 0.00 0.00 40.62 4.11
1876 2238 0.594796 GCGAGTTTGCACAAGGGTTG 60.595 55.000 0.00 0.00 34.15 3.77
1877 2239 0.738389 CGAGTTTGCACAAGGGTTGT 59.262 50.000 0.00 0.00 46.75 3.32
1878 2240 1.944024 CGAGTTTGCACAAGGGTTGTA 59.056 47.619 0.00 0.00 43.23 2.41
1879 2241 2.032030 CGAGTTTGCACAAGGGTTGTAG 60.032 50.000 0.00 0.00 43.23 2.74
1880 2242 2.293399 GAGTTTGCACAAGGGTTGTAGG 59.707 50.000 0.00 0.00 43.23 3.18
1881 2243 2.092103 AGTTTGCACAAGGGTTGTAGGA 60.092 45.455 0.00 0.00 43.23 2.94
1882 2244 2.270352 TTGCACAAGGGTTGTAGGAG 57.730 50.000 0.00 0.00 43.23 3.69
1883 2245 1.136828 TGCACAAGGGTTGTAGGAGT 58.863 50.000 0.00 0.00 43.23 3.85
1884 2246 2.331166 TGCACAAGGGTTGTAGGAGTA 58.669 47.619 0.00 0.00 43.23 2.59
1885 2247 2.301870 TGCACAAGGGTTGTAGGAGTAG 59.698 50.000 0.00 0.00 43.23 2.57
1886 2248 2.565834 GCACAAGGGTTGTAGGAGTAGA 59.434 50.000 0.00 0.00 43.23 2.59
1887 2249 3.197983 GCACAAGGGTTGTAGGAGTAGAT 59.802 47.826 0.00 0.00 43.23 1.98
1888 2250 4.323562 GCACAAGGGTTGTAGGAGTAGATT 60.324 45.833 0.00 0.00 43.23 2.40
1889 2251 5.803470 GCACAAGGGTTGTAGGAGTAGATTT 60.803 44.000 0.00 0.00 43.23 2.17
1890 2252 6.238648 CACAAGGGTTGTAGGAGTAGATTTT 58.761 40.000 0.00 0.00 43.23 1.82
1891 2253 6.715264 CACAAGGGTTGTAGGAGTAGATTTTT 59.285 38.462 0.00 0.00 43.23 1.94
1892 2254 7.881232 CACAAGGGTTGTAGGAGTAGATTTTTA 59.119 37.037 0.00 0.00 43.23 1.52
1893 2255 8.612145 ACAAGGGTTGTAGGAGTAGATTTTTAT 58.388 33.333 0.00 0.00 43.27 1.40
1894 2256 9.462606 CAAGGGTTGTAGGAGTAGATTTTTATT 57.537 33.333 0.00 0.00 0.00 1.40
1895 2257 9.682465 AAGGGTTGTAGGAGTAGATTTTTATTC 57.318 33.333 0.00 0.00 0.00 1.75
1896 2258 8.272889 AGGGTTGTAGGAGTAGATTTTTATTCC 58.727 37.037 0.00 0.00 31.49 3.01
1897 2259 7.501559 GGGTTGTAGGAGTAGATTTTTATTCCC 59.498 40.741 0.00 0.00 31.64 3.97
1898 2260 8.050930 GGTTGTAGGAGTAGATTTTTATTCCCA 58.949 37.037 0.00 0.00 31.64 4.37
1899 2261 9.628500 GTTGTAGGAGTAGATTTTTATTCCCAT 57.372 33.333 0.00 0.00 31.64 4.00
1901 2263 9.847224 TGTAGGAGTAGATTTTTATTCCCATTC 57.153 33.333 0.00 0.00 31.64 2.67
1902 2264 9.286170 GTAGGAGTAGATTTTTATTCCCATTCC 57.714 37.037 0.00 0.00 31.64 3.01
1903 2265 7.298374 AGGAGTAGATTTTTATTCCCATTCCC 58.702 38.462 0.00 0.00 31.64 3.97
1904 2266 7.131069 AGGAGTAGATTTTTATTCCCATTCCCT 59.869 37.037 0.00 0.00 31.64 4.20
1905 2267 7.785028 GGAGTAGATTTTTATTCCCATTCCCTT 59.215 37.037 0.00 0.00 0.00 3.95
1906 2268 8.539117 AGTAGATTTTTATTCCCATTCCCTTG 57.461 34.615 0.00 0.00 0.00 3.61
1907 2269 8.343787 AGTAGATTTTTATTCCCATTCCCTTGA 58.656 33.333 0.00 0.00 0.00 3.02
1908 2270 9.147732 GTAGATTTTTATTCCCATTCCCTTGAT 57.852 33.333 0.00 0.00 0.00 2.57
1909 2271 8.628368 AGATTTTTATTCCCATTCCCTTGATT 57.372 30.769 0.00 0.00 0.00 2.57
1910 2272 8.488668 AGATTTTTATTCCCATTCCCTTGATTG 58.511 33.333 0.00 0.00 0.00 2.67
1911 2273 6.558488 TTTTATTCCCATTCCCTTGATTGG 57.442 37.500 0.00 0.00 40.29 3.16
1912 2274 1.864669 TTCCCATTCCCTTGATTGGC 58.135 50.000 0.00 0.00 39.61 4.52
1913 2275 0.709397 TCCCATTCCCTTGATTGGCA 59.291 50.000 0.00 0.00 39.61 4.92
1914 2276 1.291637 TCCCATTCCCTTGATTGGCAT 59.708 47.619 0.00 0.00 39.61 4.40
1915 2277 2.517553 TCCCATTCCCTTGATTGGCATA 59.482 45.455 0.00 0.00 39.61 3.14
1916 2278 3.142597 TCCCATTCCCTTGATTGGCATAT 59.857 43.478 0.00 0.00 39.61 1.78
1917 2279 3.259876 CCCATTCCCTTGATTGGCATATG 59.740 47.826 0.00 0.00 39.61 1.78
1918 2280 4.154176 CCATTCCCTTGATTGGCATATGA 58.846 43.478 6.97 0.00 35.77 2.15
1919 2281 4.775780 CCATTCCCTTGATTGGCATATGAT 59.224 41.667 6.97 0.00 35.77 2.45
1920 2282 5.953548 CCATTCCCTTGATTGGCATATGATA 59.046 40.000 6.97 0.00 35.77 2.15
1921 2283 6.096423 CCATTCCCTTGATTGGCATATGATAG 59.904 42.308 6.97 0.00 35.77 2.08
1922 2284 6.452757 TTCCCTTGATTGGCATATGATAGA 57.547 37.500 6.97 0.00 0.00 1.98
1923 2285 6.452757 TCCCTTGATTGGCATATGATAGAA 57.547 37.500 6.97 0.00 0.00 2.10
1924 2286 6.479006 TCCCTTGATTGGCATATGATAGAAG 58.521 40.000 6.97 0.40 0.00 2.85
1925 2287 6.044754 TCCCTTGATTGGCATATGATAGAAGT 59.955 38.462 6.97 0.00 0.00 3.01
1926 2288 6.718454 CCCTTGATTGGCATATGATAGAAGTT 59.282 38.462 6.97 0.00 0.00 2.66
1927 2289 7.309012 CCCTTGATTGGCATATGATAGAAGTTG 60.309 40.741 6.97 0.00 0.00 3.16
1928 2290 7.446319 CCTTGATTGGCATATGATAGAAGTTGA 59.554 37.037 6.97 0.00 0.00 3.18
1929 2291 7.734924 TGATTGGCATATGATAGAAGTTGAC 57.265 36.000 6.97 0.00 0.00 3.18
1930 2292 7.281841 TGATTGGCATATGATAGAAGTTGACA 58.718 34.615 6.97 0.00 0.00 3.58
1931 2293 7.940688 TGATTGGCATATGATAGAAGTTGACAT 59.059 33.333 6.97 0.00 0.00 3.06
1932 2294 7.500720 TTGGCATATGATAGAAGTTGACATG 57.499 36.000 6.97 0.00 0.00 3.21
1933 2295 5.999600 TGGCATATGATAGAAGTTGACATGG 59.000 40.000 6.97 0.00 0.00 3.66
1934 2296 5.413833 GGCATATGATAGAAGTTGACATGGG 59.586 44.000 6.97 0.00 0.00 4.00
1935 2297 6.000219 GCATATGATAGAAGTTGACATGGGT 59.000 40.000 6.97 0.00 0.00 4.51
1936 2298 7.161404 GCATATGATAGAAGTTGACATGGGTA 58.839 38.462 6.97 0.00 0.00 3.69
1937 2299 7.661437 GCATATGATAGAAGTTGACATGGGTAA 59.339 37.037 6.97 0.00 0.00 2.85
1938 2300 9.559732 CATATGATAGAAGTTGACATGGGTAAA 57.440 33.333 0.00 0.00 0.00 2.01
1940 2302 7.681939 TGATAGAAGTTGACATGGGTAAAAC 57.318 36.000 0.00 0.00 0.00 2.43
1941 2303 7.458397 TGATAGAAGTTGACATGGGTAAAACT 58.542 34.615 0.00 0.00 36.23 2.66
1942 2304 8.598916 TGATAGAAGTTGACATGGGTAAAACTA 58.401 33.333 0.00 0.00 34.58 2.24
1943 2305 8.788325 ATAGAAGTTGACATGGGTAAAACTAC 57.212 34.615 0.00 0.00 34.58 2.73
1944 2306 6.002082 AGAAGTTGACATGGGTAAAACTACC 58.998 40.000 0.00 0.00 34.58 3.18
1958 2320 8.599055 GGTAAAACTACCCCTAAAAGATATCG 57.401 38.462 0.00 0.00 34.06 2.92
1959 2321 7.658982 GGTAAAACTACCCCTAAAAGATATCGG 59.341 40.741 0.00 0.00 34.06 4.18
1960 2322 6.819947 AAACTACCCCTAAAAGATATCGGT 57.180 37.500 0.00 0.00 0.00 4.69
1961 2323 5.803237 ACTACCCCTAAAAGATATCGGTG 57.197 43.478 6.49 1.25 0.00 4.94
1962 2324 5.214293 ACTACCCCTAAAAGATATCGGTGT 58.786 41.667 6.49 0.00 0.00 4.16
1963 2325 4.417426 ACCCCTAAAAGATATCGGTGTG 57.583 45.455 0.00 0.00 0.00 3.82
1964 2326 4.035112 ACCCCTAAAAGATATCGGTGTGA 58.965 43.478 0.00 0.00 0.00 3.58
1965 2327 4.472108 ACCCCTAAAAGATATCGGTGTGAA 59.528 41.667 0.00 0.00 0.00 3.18
1966 2328 5.132144 ACCCCTAAAAGATATCGGTGTGAAT 59.868 40.000 0.00 0.00 0.00 2.57
1967 2329 6.062095 CCCCTAAAAGATATCGGTGTGAATT 58.938 40.000 0.00 0.00 0.00 2.17
1968 2330 6.017109 CCCCTAAAAGATATCGGTGTGAATTG 60.017 42.308 0.00 0.00 0.00 2.32
1969 2331 6.017109 CCCTAAAAGATATCGGTGTGAATTGG 60.017 42.308 0.00 0.00 0.00 3.16
1970 2332 4.900635 AAAGATATCGGTGTGAATTGGC 57.099 40.909 0.00 0.00 0.00 4.52
1971 2333 3.845781 AGATATCGGTGTGAATTGGCT 57.154 42.857 0.00 0.00 0.00 4.75
1972 2334 4.156455 AGATATCGGTGTGAATTGGCTT 57.844 40.909 0.00 0.00 0.00 4.35
1973 2335 4.130118 AGATATCGGTGTGAATTGGCTTC 58.870 43.478 0.00 0.00 0.00 3.86
1974 2336 1.463674 ATCGGTGTGAATTGGCTTCC 58.536 50.000 0.00 0.00 32.49 3.46
1975 2337 0.400213 TCGGTGTGAATTGGCTTCCT 59.600 50.000 0.00 0.00 32.49 3.36
1976 2338 0.804989 CGGTGTGAATTGGCTTCCTC 59.195 55.000 0.00 0.00 32.49 3.71
1977 2339 1.881925 CGGTGTGAATTGGCTTCCTCA 60.882 52.381 0.00 0.00 32.49 3.86
1978 2340 2.238521 GGTGTGAATTGGCTTCCTCAA 58.761 47.619 0.00 0.00 32.49 3.02
1979 2341 2.827921 GGTGTGAATTGGCTTCCTCAAT 59.172 45.455 0.00 0.00 36.50 2.57
1980 2342 3.259123 GGTGTGAATTGGCTTCCTCAATT 59.741 43.478 0.00 0.00 44.53 2.32
1981 2343 4.262592 GGTGTGAATTGGCTTCCTCAATTT 60.263 41.667 0.00 0.00 42.68 1.82
1982 2344 5.299949 GTGTGAATTGGCTTCCTCAATTTT 58.700 37.500 0.00 0.00 42.68 1.82
1983 2345 5.406477 GTGTGAATTGGCTTCCTCAATTTTC 59.594 40.000 0.00 0.00 42.68 2.29
1984 2346 5.070180 TGTGAATTGGCTTCCTCAATTTTCA 59.930 36.000 0.00 0.00 42.68 2.69
1985 2347 5.636543 GTGAATTGGCTTCCTCAATTTTCAG 59.363 40.000 0.00 0.00 42.68 3.02
1986 2348 5.305128 TGAATTGGCTTCCTCAATTTTCAGT 59.695 36.000 0.00 0.00 42.68 3.41
1987 2349 4.853924 TTGGCTTCCTCAATTTTCAGTC 57.146 40.909 0.00 0.00 0.00 3.51
1988 2350 3.157087 TGGCTTCCTCAATTTTCAGTCC 58.843 45.455 0.00 0.00 0.00 3.85
1989 2351 2.493675 GGCTTCCTCAATTTTCAGTCCC 59.506 50.000 0.00 0.00 0.00 4.46
1990 2352 2.493675 GCTTCCTCAATTTTCAGTCCCC 59.506 50.000 0.00 0.00 0.00 4.81
1991 2353 3.815757 GCTTCCTCAATTTTCAGTCCCCT 60.816 47.826 0.00 0.00 0.00 4.79
1992 2354 4.411013 CTTCCTCAATTTTCAGTCCCCTT 58.589 43.478 0.00 0.00 0.00 3.95
1993 2355 4.034285 TCCTCAATTTTCAGTCCCCTTC 57.966 45.455 0.00 0.00 0.00 3.46
1994 2356 3.092301 CCTCAATTTTCAGTCCCCTTCC 58.908 50.000 0.00 0.00 0.00 3.46
1995 2357 3.092301 CTCAATTTTCAGTCCCCTTCCC 58.908 50.000 0.00 0.00 0.00 3.97
1996 2358 2.448961 TCAATTTTCAGTCCCCTTCCCA 59.551 45.455 0.00 0.00 0.00 4.37
1997 2359 2.562738 CAATTTTCAGTCCCCTTCCCAC 59.437 50.000 0.00 0.00 0.00 4.61
1998 2360 1.529744 TTTTCAGTCCCCTTCCCACT 58.470 50.000 0.00 0.00 0.00 4.00
1999 2361 1.529744 TTTCAGTCCCCTTCCCACTT 58.470 50.000 0.00 0.00 0.00 3.16
2000 2362 2.426431 TTCAGTCCCCTTCCCACTTA 57.574 50.000 0.00 0.00 0.00 2.24
2001 2363 2.426431 TCAGTCCCCTTCCCACTTAA 57.574 50.000 0.00 0.00 0.00 1.85
2002 2364 2.708759 TCAGTCCCCTTCCCACTTAAA 58.291 47.619 0.00 0.00 0.00 1.52
2003 2365 2.374170 TCAGTCCCCTTCCCACTTAAAC 59.626 50.000 0.00 0.00 0.00 2.01
2004 2366 2.375509 CAGTCCCCTTCCCACTTAAACT 59.624 50.000 0.00 0.00 0.00 2.66
2005 2367 2.643304 AGTCCCCTTCCCACTTAAACTC 59.357 50.000 0.00 0.00 0.00 3.01
2006 2368 1.990327 TCCCCTTCCCACTTAAACTCC 59.010 52.381 0.00 0.00 0.00 3.85
2007 2369 1.005569 CCCCTTCCCACTTAAACTCCC 59.994 57.143 0.00 0.00 0.00 4.30
2008 2370 1.708551 CCCTTCCCACTTAAACTCCCA 59.291 52.381 0.00 0.00 0.00 4.37
2009 2371 2.311841 CCCTTCCCACTTAAACTCCCAT 59.688 50.000 0.00 0.00 0.00 4.00
2010 2372 3.245622 CCCTTCCCACTTAAACTCCCATT 60.246 47.826 0.00 0.00 0.00 3.16
2011 2373 4.017867 CCCTTCCCACTTAAACTCCCATTA 60.018 45.833 0.00 0.00 0.00 1.90
2012 2374 5.517655 CCCTTCCCACTTAAACTCCCATTAA 60.518 44.000 0.00 0.00 0.00 1.40
2013 2375 6.194967 CCTTCCCACTTAAACTCCCATTAAT 58.805 40.000 0.00 0.00 0.00 1.40
2014 2376 6.321435 CCTTCCCACTTAAACTCCCATTAATC 59.679 42.308 0.00 0.00 0.00 1.75
2015 2377 5.762279 TCCCACTTAAACTCCCATTAATCC 58.238 41.667 0.00 0.00 0.00 3.01
2016 2378 4.893524 CCCACTTAAACTCCCATTAATCCC 59.106 45.833 0.00 0.00 0.00 3.85
2017 2379 4.893524 CCACTTAAACTCCCATTAATCCCC 59.106 45.833 0.00 0.00 0.00 4.81
2018 2380 5.340863 CCACTTAAACTCCCATTAATCCCCT 60.341 44.000 0.00 0.00 0.00 4.79
2033 2395 8.966868 CATTAATCCCCTACAACTAAACAATGT 58.033 33.333 0.00 0.00 0.00 2.71
2036 2398 5.556915 TCCCCTACAACTAAACAATGTCTG 58.443 41.667 0.00 0.00 0.00 3.51
2037 2399 4.700213 CCCCTACAACTAAACAATGTCTGG 59.300 45.833 0.00 0.00 0.00 3.86
2038 2400 5.313712 CCCTACAACTAAACAATGTCTGGT 58.686 41.667 0.00 0.00 0.00 4.00
2046 2408 9.398170 CAACTAAACAATGTCTGGTGAAAATAG 57.602 33.333 0.00 0.00 0.00 1.73
2062 2424 5.754406 TGAAAATAGAAAACGAACGTCTCCA 59.246 36.000 0.00 0.00 0.00 3.86
2071 2433 1.228490 AACGTCTCCACCTCCGACT 60.228 57.895 0.00 0.00 0.00 4.18
2078 2440 2.046892 CACCTCCGACTTGCCCTG 60.047 66.667 0.00 0.00 0.00 4.45
2118 2480 4.527944 AGCAAAGCCTCTAAATTCCCTAC 58.472 43.478 0.00 0.00 0.00 3.18
2122 2484 1.767088 GCCTCTAAATTCCCTACCCGT 59.233 52.381 0.00 0.00 0.00 5.28
2123 2485 2.224233 GCCTCTAAATTCCCTACCCGTC 60.224 54.545 0.00 0.00 0.00 4.79
2159 2521 6.982852 TGATTCGCCCTAAAACAATTTTACA 58.017 32.000 0.00 0.00 34.19 2.41
2161 2523 4.785417 TCGCCCTAAAACAATTTTACACG 58.215 39.130 0.00 0.00 34.19 4.49
2164 2526 4.745620 GCCCTAAAACAATTTTACACGCAA 59.254 37.500 0.00 0.00 34.19 4.85
2173 2535 6.913170 ACAATTTTACACGCAATTCATCTCT 58.087 32.000 0.00 0.00 0.00 3.10
2176 2538 5.530519 TTTACACGCAATTCATCTCTGAC 57.469 39.130 0.00 0.00 0.00 3.51
2177 2539 3.044235 ACACGCAATTCATCTCTGACA 57.956 42.857 0.00 0.00 0.00 3.58
2185 2547 5.049198 GCAATTCATCTCTGACACAGAACAA 60.049 40.000 0.00 0.00 40.18 2.83
2189 2551 9.458727 AATTCATCTCTGACACAGAACAAATAT 57.541 29.630 0.00 0.00 40.18 1.28
2191 2553 7.614494 TCATCTCTGACACAGAACAAATATCA 58.386 34.615 0.00 0.00 40.18 2.15
2192 2554 7.547019 TCATCTCTGACACAGAACAAATATCAC 59.453 37.037 0.00 0.00 40.18 3.06
2223 2585 7.408756 AAAAACTTAAACGTAAAAGGTCCCT 57.591 32.000 12.79 0.00 0.00 4.20
2240 2603 5.103473 AGGTCCCTCTACATAGATCAGTTCA 60.103 44.000 0.00 0.00 0.00 3.18
2243 2606 6.719370 GTCCCTCTACATAGATCAGTTCAGAT 59.281 42.308 0.00 0.00 0.00 2.90
2262 2625 4.073549 AGATAACTTAGATCGACGGAGGG 58.926 47.826 0.00 0.00 0.00 4.30
2301 2664 0.750249 TCACGTTGAGGAAGTGCTCA 59.250 50.000 0.00 0.00 35.97 4.26
2302 2665 0.861837 CACGTTGAGGAAGTGCTCAC 59.138 55.000 1.55 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.159448 CCGATTAGTTTGCGCCATTTGA 60.159 45.455 4.18 0.00 0.00 2.69
18 19 2.159028 GCTCTGCCTCTCCGATTAGTTT 60.159 50.000 0.00 0.00 0.00 2.66
46 47 2.024414 ACAGCGGAAATTTCTATGGGC 58.976 47.619 17.42 12.56 0.00 5.36
52 53 5.337250 GGGGAATAAAACAGCGGAAATTTCT 60.337 40.000 17.42 0.00 0.00 2.52
74 75 4.452733 GTCCGGCAGTTCCTCGGG 62.453 72.222 0.00 0.00 43.54 5.14
96 97 5.867903 AACAGAGATCAGTCCTTATCCTG 57.132 43.478 0.00 0.00 31.86 3.86
116 117 1.803555 GCACTTGCAGGAGAGAGAAAC 59.196 52.381 1.40 0.00 41.59 2.78
118 119 3.923354 GCACTTGCAGGAGAGAGAA 57.077 52.632 1.40 0.00 41.59 2.87
170 173 7.269316 ACAACGTTTTAACAAGGATTTTGGAT 58.731 30.769 0.00 0.00 0.00 3.41
357 366 2.887152 CCTGCTGCCCACCTATAAATTC 59.113 50.000 0.00 0.00 0.00 2.17
359 368 1.145738 CCCTGCTGCCCACCTATAAAT 59.854 52.381 0.00 0.00 0.00 1.40
375 386 4.437587 CTGCCCTTCCCTGCCCTG 62.438 72.222 0.00 0.00 0.00 4.45
378 389 4.120755 CTCCTGCCCTTCCCTGCC 62.121 72.222 0.00 0.00 0.00 4.85
379 390 1.977293 CTACTCCTGCCCTTCCCTGC 61.977 65.000 0.00 0.00 0.00 4.85
380 391 1.977293 GCTACTCCTGCCCTTCCCTG 61.977 65.000 0.00 0.00 0.00 4.45
381 392 1.690985 GCTACTCCTGCCCTTCCCT 60.691 63.158 0.00 0.00 0.00 4.20
382 393 0.398664 TAGCTACTCCTGCCCTTCCC 60.399 60.000 0.00 0.00 0.00 3.97
383 394 1.723288 ATAGCTACTCCTGCCCTTCC 58.277 55.000 0.00 0.00 0.00 3.46
384 395 6.800072 ATATAATAGCTACTCCTGCCCTTC 57.200 41.667 0.00 0.00 0.00 3.46
385 396 6.730977 TCAATATAATAGCTACTCCTGCCCTT 59.269 38.462 0.00 0.00 0.00 3.95
389 400 8.877779 CAATGTCAATATAATAGCTACTCCTGC 58.122 37.037 0.00 0.00 0.00 4.85
410 424 9.505995 GAAAAATCAAGAAATGTTTTGCAATGT 57.494 25.926 0.00 0.00 32.58 2.71
442 456 4.514441 CAGCATATGATCAAGAAGTGGGTC 59.486 45.833 6.97 0.00 0.00 4.46
444 458 3.819337 CCAGCATATGATCAAGAAGTGGG 59.181 47.826 6.97 0.00 0.00 4.61
445 459 3.819337 CCCAGCATATGATCAAGAAGTGG 59.181 47.826 6.97 4.68 0.00 4.00
448 466 3.752665 AGCCCAGCATATGATCAAGAAG 58.247 45.455 6.97 0.00 0.00 2.85
457 475 7.382110 GGTACTGATATATAGCCCAGCATATG 58.618 42.308 0.00 0.00 0.00 1.78
470 488 6.539173 TCATTTTTGCGGGGTACTGATATAT 58.461 36.000 0.00 0.00 0.00 0.86
477 495 3.080300 TCATCATTTTTGCGGGGTACT 57.920 42.857 0.00 0.00 0.00 2.73
478 496 3.507786 GTTCATCATTTTTGCGGGGTAC 58.492 45.455 0.00 0.00 0.00 3.34
479 497 2.494073 GGTTCATCATTTTTGCGGGGTA 59.506 45.455 0.00 0.00 0.00 3.69
480 498 1.275010 GGTTCATCATTTTTGCGGGGT 59.725 47.619 0.00 0.00 0.00 4.95
494 515 0.774908 TTTTGGGACGGAGGGTTCAT 59.225 50.000 0.00 0.00 0.00 2.57
500 521 4.840271 AGTTACTTATTTTGGGACGGAGG 58.160 43.478 0.00 0.00 0.00 4.30
503 524 6.753107 ATTGAGTTACTTATTTTGGGACGG 57.247 37.500 0.00 0.00 0.00 4.79
505 526 9.758651 ACAAAATTGAGTTACTTATTTTGGGAC 57.241 29.630 28.77 3.66 45.43 4.46
560 582 9.554395 TCTCAAAATAAGTGAGTCAATGTTACA 57.446 29.630 0.00 0.00 42.63 2.41
561 583 9.813080 GTCTCAAAATAAGTGAGTCAATGTTAC 57.187 33.333 0.00 0.00 42.63 2.50
562 584 8.708742 CGTCTCAAAATAAGTGAGTCAATGTTA 58.291 33.333 0.00 0.00 42.63 2.41
568 590 5.926542 CCTTCGTCTCAAAATAAGTGAGTCA 59.073 40.000 0.00 0.00 42.63 3.41
569 591 5.348997 CCCTTCGTCTCAAAATAAGTGAGTC 59.651 44.000 1.67 0.00 42.63 3.36
571 593 5.479306 TCCCTTCGTCTCAAAATAAGTGAG 58.521 41.667 0.00 0.00 43.28 3.51
572 594 5.011738 ACTCCCTTCGTCTCAAAATAAGTGA 59.988 40.000 0.00 0.00 0.00 3.41
573 595 5.238583 ACTCCCTTCGTCTCAAAATAAGTG 58.761 41.667 0.00 0.00 0.00 3.16
574 596 5.485209 ACTCCCTTCGTCTCAAAATAAGT 57.515 39.130 0.00 0.00 0.00 2.24
575 597 7.265673 TCATACTCCCTTCGTCTCAAAATAAG 58.734 38.462 0.00 0.00 0.00 1.73
576 598 7.177832 TCATACTCCCTTCGTCTCAAAATAA 57.822 36.000 0.00 0.00 0.00 1.40
577 599 6.785337 TCATACTCCCTTCGTCTCAAAATA 57.215 37.500 0.00 0.00 0.00 1.40
578 600 5.677319 TCATACTCCCTTCGTCTCAAAAT 57.323 39.130 0.00 0.00 0.00 1.82
579 601 5.477607 TTCATACTCCCTTCGTCTCAAAA 57.522 39.130 0.00 0.00 0.00 2.44
580 602 5.677319 ATTCATACTCCCTTCGTCTCAAA 57.323 39.130 0.00 0.00 0.00 2.69
581 603 5.677319 AATTCATACTCCCTTCGTCTCAA 57.323 39.130 0.00 0.00 0.00 3.02
582 604 6.978674 ATAATTCATACTCCCTTCGTCTCA 57.021 37.500 0.00 0.00 0.00 3.27
583 605 8.664211 AAAATAATTCATACTCCCTTCGTCTC 57.336 34.615 0.00 0.00 0.00 3.36
584 606 9.110502 GAAAAATAATTCATACTCCCTTCGTCT 57.889 33.333 0.00 0.00 0.00 4.18
585 607 9.110502 AGAAAAATAATTCATACTCCCTTCGTC 57.889 33.333 0.00 0.00 0.00 4.20
586 608 8.893727 CAGAAAAATAATTCATACTCCCTTCGT 58.106 33.333 0.00 0.00 0.00 3.85
587 609 8.345565 CCAGAAAAATAATTCATACTCCCTTCG 58.654 37.037 0.00 0.00 0.00 3.79
588 610 9.408648 TCCAGAAAAATAATTCATACTCCCTTC 57.591 33.333 0.00 0.00 0.00 3.46
589 611 9.768215 TTCCAGAAAAATAATTCATACTCCCTT 57.232 29.630 0.00 0.00 0.00 3.95
590 612 9.942526 ATTCCAGAAAAATAATTCATACTCCCT 57.057 29.630 0.00 0.00 0.00 4.20
609 631 9.679661 TCAAAACATATGCTTTAGTATTCCAGA 57.320 29.630 1.58 0.00 0.00 3.86
637 659 6.267496 ACATTGACTTGTAATAGCCAAACC 57.733 37.500 0.00 0.00 0.00 3.27
643 665 8.487176 CCAAAAACAACATTGACTTGTAATAGC 58.513 33.333 0.00 0.00 31.43 2.97
648 670 5.971763 AGCCAAAAACAACATTGACTTGTA 58.028 33.333 0.00 0.00 31.43 2.41
650 672 6.700960 TCATAGCCAAAAACAACATTGACTTG 59.299 34.615 0.00 0.00 0.00 3.16
652 674 6.040842 ACTCATAGCCAAAAACAACATTGACT 59.959 34.615 0.00 0.00 0.00 3.41
654 676 6.403866 ACTCATAGCCAAAAACAACATTGA 57.596 33.333 0.00 0.00 0.00 2.57
658 680 5.753744 CGTAACTCATAGCCAAAAACAACA 58.246 37.500 0.00 0.00 0.00 3.33
659 681 4.615541 GCGTAACTCATAGCCAAAAACAAC 59.384 41.667 0.00 0.00 0.00 3.32
660 682 4.789784 GCGTAACTCATAGCCAAAAACAA 58.210 39.130 0.00 0.00 0.00 2.83
661 683 4.413495 GCGTAACTCATAGCCAAAAACA 57.587 40.909 0.00 0.00 0.00 2.83
672 694 5.885912 ACAATTGGAAATAGGCGTAACTCAT 59.114 36.000 10.83 0.00 0.00 2.90
675 697 6.174760 TGTACAATTGGAAATAGGCGTAACT 58.825 36.000 10.83 0.00 0.00 2.24
681 704 6.995511 TGTACTGTACAATTGGAAATAGGC 57.004 37.500 17.74 0.35 35.38 3.93
732 755 0.657840 GCCATTGCCACGAGTCATAC 59.342 55.000 0.00 0.00 0.00 2.39
741 764 1.742510 GCCAATGTGCCATTGCCAC 60.743 57.895 17.54 8.98 36.33 5.01
752 775 2.786512 AATGGAGCGGGTGCCAATGT 62.787 55.000 0.00 0.00 44.31 2.71
753 776 2.008268 GAATGGAGCGGGTGCCAATG 62.008 60.000 0.00 0.00 44.31 2.82
754 777 1.754234 GAATGGAGCGGGTGCCAAT 60.754 57.895 0.00 0.00 44.31 3.16
755 778 1.558167 TAGAATGGAGCGGGTGCCAA 61.558 55.000 0.00 0.00 44.31 4.52
757 780 0.886490 CATAGAATGGAGCGGGTGCC 60.886 60.000 0.00 0.00 44.31 5.01
758 781 0.106708 TCATAGAATGGAGCGGGTGC 59.893 55.000 0.00 0.00 43.24 5.01
759 782 2.847327 ATCATAGAATGGAGCGGGTG 57.153 50.000 0.00 0.00 0.00 4.61
760 783 4.096681 TCATATCATAGAATGGAGCGGGT 58.903 43.478 0.00 0.00 0.00 5.28
761 784 4.403752 TCTCATATCATAGAATGGAGCGGG 59.596 45.833 0.00 0.00 0.00 6.13
762 785 5.588958 TCTCATATCATAGAATGGAGCGG 57.411 43.478 0.00 0.00 0.00 5.52
763 786 5.984323 CCATCTCATATCATAGAATGGAGCG 59.016 44.000 0.00 0.00 0.00 5.03
776 799 8.516234 AGTTAGTTATCGTGTCCATCTCATATC 58.484 37.037 0.00 0.00 0.00 1.63
791 814 5.696260 TCGCAAACATGAGTTAGTTATCG 57.304 39.130 0.00 0.00 36.84 2.92
793 816 9.935682 CAATTATCGCAAACATGAGTTAGTTAT 57.064 29.630 0.00 0.00 36.84 1.89
803 826 6.235642 GCAAGAAACAATTATCGCAAACATG 58.764 36.000 0.00 0.00 0.00 3.21
825 848 7.438160 CAGTACTAGATATTTCCATTGTTCGCA 59.562 37.037 0.00 0.00 0.00 5.10
827 850 7.926555 ACCAGTACTAGATATTTCCATTGTTCG 59.073 37.037 0.00 0.00 0.00 3.95
831 854 9.477484 GTACACCAGTACTAGATATTTCCATTG 57.523 37.037 0.00 0.00 45.66 2.82
851 874 3.674969 TGGCTTCACCTGGTAGTACACC 61.675 54.545 0.00 1.46 41.74 4.16
852 875 1.621814 TGGCTTCACCTGGTAGTACAC 59.378 52.381 0.00 0.00 40.22 2.90
868 891 5.070313 ACATCATTAACCAACTGTTTTGGCT 59.930 36.000 2.85 0.00 43.23 4.75
895 918 4.806952 TTCCCTTTTCTTGGAGGAGAAA 57.193 40.909 0.00 0.00 42.28 2.52
898 921 5.126222 GCTAATTTCCCTTTTCTTGGAGGAG 59.874 44.000 0.00 0.00 34.91 3.69
900 923 5.019470 AGCTAATTTCCCTTTTCTTGGAGG 58.981 41.667 0.00 0.00 30.91 4.30
901 924 5.126222 GGAGCTAATTTCCCTTTTCTTGGAG 59.874 44.000 0.00 0.00 30.91 3.86
921 944 0.174617 CCGGTGAGAAAGAGAGGAGC 59.825 60.000 0.00 0.00 0.00 4.70
925 948 1.153745 CGGCCGGTGAGAAAGAGAG 60.154 63.158 20.10 0.00 0.00 3.20
986 1010 1.744741 GTGCTGGGAAGAGAGCAGC 60.745 63.158 0.00 0.00 45.70 5.25
1001 1025 1.106351 TGTGGGTGATGGTGTTGTGC 61.106 55.000 0.00 0.00 0.00 4.57
1023 1047 2.515057 TTGCTTCGGCCGTGTGTT 60.515 55.556 27.15 0.00 40.91 3.32
1034 1058 1.578206 GGACTCGCTTGGGTTGCTTC 61.578 60.000 0.00 0.00 0.00 3.86
1036 1060 2.032681 GGACTCGCTTGGGTTGCT 59.967 61.111 0.00 0.00 0.00 3.91
1039 1063 2.657237 CGAGGACTCGCTTGGGTT 59.343 61.111 8.93 0.00 46.50 4.11
1314 1347 2.552585 TAGTTGCTGTAGCCGCCGAC 62.553 60.000 0.80 0.00 41.18 4.79
1340 1373 1.445942 GGCACTAATCTAGGCGCCA 59.554 57.895 31.54 14.00 43.79 5.69
1534 1579 1.705337 CGGCCGCTTGACCATACAAG 61.705 60.000 14.67 0.00 46.69 3.16
1535 1580 1.743623 CGGCCGCTTGACCATACAA 60.744 57.895 14.67 0.00 0.00 2.41
1558 1608 0.183492 AGCAAGCAAGACCTCAACCA 59.817 50.000 0.00 0.00 0.00 3.67
1651 1702 6.264518 TCATCAGATACACGCAGGATTAGTAA 59.735 38.462 0.00 0.00 0.00 2.24
1653 1704 4.584743 TCATCAGATACACGCAGGATTAGT 59.415 41.667 0.00 0.00 0.00 2.24
1655 1706 5.243730 TCATCATCAGATACACGCAGGATTA 59.756 40.000 0.00 0.00 31.88 1.75
1658 1709 2.958355 TCATCATCAGATACACGCAGGA 59.042 45.455 0.00 0.00 31.88 3.86
1659 1710 3.375782 TCATCATCAGATACACGCAGG 57.624 47.619 0.00 0.00 31.88 4.85
1660 1711 4.304939 ACATCATCATCAGATACACGCAG 58.695 43.478 0.00 0.00 31.88 5.18
1661 1712 4.326504 ACATCATCATCAGATACACGCA 57.673 40.909 0.00 0.00 31.88 5.24
1662 1713 5.234972 TGAAACATCATCATCAGATACACGC 59.765 40.000 0.00 0.00 31.88 5.34
1663 1714 6.292542 GGTGAAACATCATCATCAGATACACG 60.293 42.308 0.00 0.00 39.98 4.49
1664 1715 6.539826 TGGTGAAACATCATCATCAGATACAC 59.460 38.462 0.00 0.00 39.98 2.90
1667 1718 9.498176 CTAATGGTGAAACATCATCATCAGATA 57.502 33.333 5.14 0.00 40.96 1.98
1668 1719 7.040617 GCTAATGGTGAAACATCATCATCAGAT 60.041 37.037 6.44 0.00 40.96 2.90
1669 1720 6.261603 GCTAATGGTGAAACATCATCATCAGA 59.738 38.462 6.44 0.00 40.96 3.27
1670 1721 6.436261 GCTAATGGTGAAACATCATCATCAG 58.564 40.000 5.14 1.93 40.96 2.90
1671 1722 5.300034 GGCTAATGGTGAAACATCATCATCA 59.700 40.000 5.14 0.00 40.25 3.07
1672 1723 5.533903 AGGCTAATGGTGAAACATCATCATC 59.466 40.000 5.14 0.00 40.25 2.92
1673 1724 5.452255 AGGCTAATGGTGAAACATCATCAT 58.548 37.500 0.00 0.00 42.69 2.45
1695 1746 5.613358 AACGAAGACATTTTAGGAGCAAG 57.387 39.130 0.00 0.00 0.00 4.01
1696 1747 5.298276 ACAAACGAAGACATTTTAGGAGCAA 59.702 36.000 0.00 0.00 0.00 3.91
1697 1748 4.819630 ACAAACGAAGACATTTTAGGAGCA 59.180 37.500 0.00 0.00 0.00 4.26
1698 1749 5.358298 ACAAACGAAGACATTTTAGGAGC 57.642 39.130 0.00 0.00 0.00 4.70
1699 1750 6.142320 GCAAACAAACGAAGACATTTTAGGAG 59.858 38.462 0.00 0.00 0.00 3.69
1714 1848 2.354539 CGGGCCAGCAAACAAACG 60.355 61.111 4.39 0.00 0.00 3.60
1715 1849 2.661537 GCGGGCCAGCAAACAAAC 60.662 61.111 23.91 0.00 37.05 2.93
1723 1857 2.642996 AAAAACAACTGCGGGCCAGC 62.643 55.000 22.10 22.10 45.78 4.85
1726 1860 0.671796 ACTAAAAACAACTGCGGGCC 59.328 50.000 0.00 0.00 0.00 5.80
1727 1861 2.502213 AACTAAAAACAACTGCGGGC 57.498 45.000 0.00 0.00 0.00 6.13
1728 1862 4.035278 TGAAACTAAAAACAACTGCGGG 57.965 40.909 0.00 0.00 0.00 6.13
1731 1865 7.408290 CGATCGATTGAAACTAAAAACAACTGC 60.408 37.037 10.26 0.00 0.00 4.40
1732 1866 7.408290 GCGATCGATTGAAACTAAAAACAACTG 60.408 37.037 21.57 0.00 0.00 3.16
1733 1867 6.577427 GCGATCGATTGAAACTAAAAACAACT 59.423 34.615 21.57 0.00 0.00 3.16
1734 1868 6.577427 AGCGATCGATTGAAACTAAAAACAAC 59.423 34.615 21.57 0.00 0.00 3.32
1735 1869 6.664515 AGCGATCGATTGAAACTAAAAACAA 58.335 32.000 21.57 0.00 0.00 2.83
1738 1872 6.073494 TGTGAGCGATCGATTGAAACTAAAAA 60.073 34.615 21.57 0.00 0.00 1.94
1789 2145 0.689745 TCCGACCACCCAATCCCTAG 60.690 60.000 0.00 0.00 0.00 3.02
1790 2146 0.030501 ATCCGACCACCCAATCCCTA 60.031 55.000 0.00 0.00 0.00 3.53
1791 2147 1.307866 ATCCGACCACCCAATCCCT 60.308 57.895 0.00 0.00 0.00 4.20
1792 2148 1.148498 GATCCGACCACCCAATCCC 59.852 63.158 0.00 0.00 0.00 3.85
1793 2149 0.254747 TTGATCCGACCACCCAATCC 59.745 55.000 0.00 0.00 0.00 3.01
1794 2150 1.379527 GTTGATCCGACCACCCAATC 58.620 55.000 0.00 0.00 0.00 2.67
1795 2151 0.034477 GGTTGATCCGACCACCCAAT 60.034 55.000 9.78 0.00 37.82 3.16
1796 2152 1.377229 GGTTGATCCGACCACCCAA 59.623 57.895 9.78 0.00 37.82 4.12
1797 2153 2.598787 GGGTTGATCCGACCACCCA 61.599 63.158 15.04 0.00 39.59 4.51
1798 2154 2.132089 TTGGGTTGATCCGACCACCC 62.132 60.000 15.04 10.98 39.59 4.61
1799 2155 0.958876 GTTGGGTTGATCCGACCACC 60.959 60.000 15.04 2.99 39.59 4.61
1805 2167 0.843984 ATAGGGGTTGGGTTGATCCG 59.156 55.000 0.00 0.00 37.00 4.18
1823 2185 5.365619 CCGAGTGTTTACCAAATAGGCTAT 58.634 41.667 0.00 0.00 43.14 2.97
1824 2186 4.383335 CCCGAGTGTTTACCAAATAGGCTA 60.383 45.833 0.00 0.00 43.14 3.93
1825 2187 3.606687 CCGAGTGTTTACCAAATAGGCT 58.393 45.455 0.00 0.00 43.14 4.58
1826 2188 2.681344 CCCGAGTGTTTACCAAATAGGC 59.319 50.000 0.00 0.00 43.14 3.93
1827 2189 2.681344 GCCCGAGTGTTTACCAAATAGG 59.319 50.000 0.00 0.00 45.67 2.57
1828 2190 3.340034 TGCCCGAGTGTTTACCAAATAG 58.660 45.455 0.00 0.00 0.00 1.73
1829 2191 3.420300 TGCCCGAGTGTTTACCAAATA 57.580 42.857 0.00 0.00 0.00 1.40
1830 2192 2.279935 TGCCCGAGTGTTTACCAAAT 57.720 45.000 0.00 0.00 0.00 2.32
1831 2193 1.950909 CTTGCCCGAGTGTTTACCAAA 59.049 47.619 0.00 0.00 0.00 3.28
1832 2194 1.600023 CTTGCCCGAGTGTTTACCAA 58.400 50.000 0.00 0.00 0.00 3.67
1833 2195 0.250553 CCTTGCCCGAGTGTTTACCA 60.251 55.000 0.00 0.00 0.00 3.25
1834 2196 0.035739 TCCTTGCCCGAGTGTTTACC 59.964 55.000 0.00 0.00 0.00 2.85
1835 2197 1.886886 TTCCTTGCCCGAGTGTTTAC 58.113 50.000 0.00 0.00 0.00 2.01
1836 2198 2.642154 TTTCCTTGCCCGAGTGTTTA 57.358 45.000 0.00 0.00 0.00 2.01
1837 2199 1.613437 CATTTCCTTGCCCGAGTGTTT 59.387 47.619 0.00 0.00 0.00 2.83
1838 2200 1.247567 CATTTCCTTGCCCGAGTGTT 58.752 50.000 0.00 0.00 0.00 3.32
1839 2201 1.244019 GCATTTCCTTGCCCGAGTGT 61.244 55.000 0.00 0.00 36.60 3.55
1840 2202 1.508088 GCATTTCCTTGCCCGAGTG 59.492 57.895 0.00 0.00 36.60 3.51
1841 2203 2.040544 CGCATTTCCTTGCCCGAGT 61.041 57.895 0.00 0.00 39.52 4.18
1842 2204 1.709147 CTCGCATTTCCTTGCCCGAG 61.709 60.000 0.00 0.00 39.52 4.63
1843 2205 1.745115 CTCGCATTTCCTTGCCCGA 60.745 57.895 0.00 0.00 39.52 5.14
1844 2206 1.586154 AACTCGCATTTCCTTGCCCG 61.586 55.000 0.00 0.00 39.52 6.13
1845 2207 0.603065 AAACTCGCATTTCCTTGCCC 59.397 50.000 0.00 0.00 39.52 5.36
1846 2208 1.701704 CAAACTCGCATTTCCTTGCC 58.298 50.000 0.00 0.00 39.52 4.52
1847 2209 1.063031 GCAAACTCGCATTTCCTTGC 58.937 50.000 0.00 0.00 39.29 4.01
1848 2210 2.053627 GTGCAAACTCGCATTTCCTTG 58.946 47.619 0.00 0.00 45.26 3.61
1849 2211 1.680735 TGTGCAAACTCGCATTTCCTT 59.319 42.857 0.00 0.00 45.26 3.36
1850 2212 1.317613 TGTGCAAACTCGCATTTCCT 58.682 45.000 0.00 0.00 45.26 3.36
1851 2213 2.053627 CTTGTGCAAACTCGCATTTCC 58.946 47.619 0.00 0.00 45.26 3.13
1852 2214 2.053627 CCTTGTGCAAACTCGCATTTC 58.946 47.619 0.00 0.00 45.26 2.17
1853 2215 1.269726 CCCTTGTGCAAACTCGCATTT 60.270 47.619 0.00 0.00 45.26 2.32
1854 2216 0.314935 CCCTTGTGCAAACTCGCATT 59.685 50.000 0.00 0.00 45.26 3.56
1855 2217 0.823356 ACCCTTGTGCAAACTCGCAT 60.823 50.000 0.00 0.00 45.26 4.73
1856 2218 1.034838 AACCCTTGTGCAAACTCGCA 61.035 50.000 0.00 0.00 40.32 5.10
1857 2219 0.594796 CAACCCTTGTGCAAACTCGC 60.595 55.000 0.00 0.00 0.00 5.03
1858 2220 0.738389 ACAACCCTTGTGCAAACTCG 59.262 50.000 0.00 0.00 43.48 4.18
1859 2221 2.293399 CCTACAACCCTTGTGCAAACTC 59.707 50.000 0.00 0.00 45.03 3.01
1860 2222 2.092103 TCCTACAACCCTTGTGCAAACT 60.092 45.455 0.00 0.00 45.03 2.66
1861 2223 2.293399 CTCCTACAACCCTTGTGCAAAC 59.707 50.000 0.00 0.00 45.03 2.93
1862 2224 2.092103 ACTCCTACAACCCTTGTGCAAA 60.092 45.455 0.00 0.00 45.03 3.68
1863 2225 1.493022 ACTCCTACAACCCTTGTGCAA 59.507 47.619 0.00 0.00 45.03 4.08
1864 2226 1.136828 ACTCCTACAACCCTTGTGCA 58.863 50.000 0.00 0.00 45.03 4.57
1865 2227 2.565834 TCTACTCCTACAACCCTTGTGC 59.434 50.000 0.00 0.00 45.03 4.57
1866 2228 5.422214 AATCTACTCCTACAACCCTTGTG 57.578 43.478 0.00 0.00 45.03 3.33
1868 2230 9.462606 AATAAAAATCTACTCCTACAACCCTTG 57.537 33.333 0.00 0.00 0.00 3.61
1869 2231 9.682465 GAATAAAAATCTACTCCTACAACCCTT 57.318 33.333 0.00 0.00 0.00 3.95
1870 2232 8.272889 GGAATAAAAATCTACTCCTACAACCCT 58.727 37.037 0.00 0.00 0.00 4.34
1871 2233 7.501559 GGGAATAAAAATCTACTCCTACAACCC 59.498 40.741 0.00 0.00 0.00 4.11
1872 2234 8.050930 TGGGAATAAAAATCTACTCCTACAACC 58.949 37.037 0.00 0.00 0.00 3.77
1873 2235 9.628500 ATGGGAATAAAAATCTACTCCTACAAC 57.372 33.333 0.00 0.00 0.00 3.32
1875 2237 9.847224 GAATGGGAATAAAAATCTACTCCTACA 57.153 33.333 0.00 0.00 0.00 2.74
1876 2238 9.286170 GGAATGGGAATAAAAATCTACTCCTAC 57.714 37.037 0.00 0.00 0.00 3.18
1877 2239 8.445588 GGGAATGGGAATAAAAATCTACTCCTA 58.554 37.037 0.00 0.00 0.00 2.94
1878 2240 7.131069 AGGGAATGGGAATAAAAATCTACTCCT 59.869 37.037 0.00 0.00 0.00 3.69
1879 2241 7.298374 AGGGAATGGGAATAAAAATCTACTCC 58.702 38.462 0.00 0.00 0.00 3.85
1880 2242 8.633561 CAAGGGAATGGGAATAAAAATCTACTC 58.366 37.037 0.00 0.00 0.00 2.59
1881 2243 8.343787 TCAAGGGAATGGGAATAAAAATCTACT 58.656 33.333 0.00 0.00 0.00 2.57
1882 2244 8.533569 TCAAGGGAATGGGAATAAAAATCTAC 57.466 34.615 0.00 0.00 0.00 2.59
1883 2245 9.728100 AATCAAGGGAATGGGAATAAAAATCTA 57.272 29.630 0.00 0.00 0.00 1.98
1884 2246 8.488668 CAATCAAGGGAATGGGAATAAAAATCT 58.511 33.333 0.00 0.00 0.00 2.40
1885 2247 7.716560 CCAATCAAGGGAATGGGAATAAAAATC 59.283 37.037 0.00 0.00 39.93 2.17
1886 2248 7.576403 CCAATCAAGGGAATGGGAATAAAAAT 58.424 34.615 0.00 0.00 39.93 1.82
1887 2249 6.578038 GCCAATCAAGGGAATGGGAATAAAAA 60.578 38.462 1.37 0.00 43.19 1.94
1888 2250 5.104569 GCCAATCAAGGGAATGGGAATAAAA 60.105 40.000 1.37 0.00 43.19 1.52
1889 2251 4.408596 GCCAATCAAGGGAATGGGAATAAA 59.591 41.667 1.37 0.00 43.19 1.40
1890 2252 3.966665 GCCAATCAAGGGAATGGGAATAA 59.033 43.478 1.37 0.00 43.19 1.40
1891 2253 3.052262 TGCCAATCAAGGGAATGGGAATA 60.052 43.478 1.37 0.00 40.95 1.75
1892 2254 2.293051 TGCCAATCAAGGGAATGGGAAT 60.293 45.455 1.37 0.00 40.95 3.01
1893 2255 1.078490 TGCCAATCAAGGGAATGGGAA 59.922 47.619 1.37 0.00 40.95 3.97
1894 2256 0.709397 TGCCAATCAAGGGAATGGGA 59.291 50.000 1.37 0.00 43.19 4.37
1895 2257 1.797320 ATGCCAATCAAGGGAATGGG 58.203 50.000 1.37 0.00 43.19 4.00
1896 2258 4.154176 TCATATGCCAATCAAGGGAATGG 58.846 43.478 0.00 0.00 45.34 3.16
1897 2259 5.995565 ATCATATGCCAATCAAGGGAATG 57.004 39.130 0.00 0.00 30.71 2.67
1898 2260 7.036154 TCTATCATATGCCAATCAAGGGAAT 57.964 36.000 0.00 0.00 30.71 3.01
1899 2261 6.452757 TCTATCATATGCCAATCAAGGGAA 57.547 37.500 0.00 0.00 30.71 3.97
1900 2262 6.044754 ACTTCTATCATATGCCAATCAAGGGA 59.955 38.462 0.00 0.00 0.00 4.20
1901 2263 6.243900 ACTTCTATCATATGCCAATCAAGGG 58.756 40.000 0.00 0.00 0.00 3.95
1902 2264 7.446319 TCAACTTCTATCATATGCCAATCAAGG 59.554 37.037 0.00 0.00 0.00 3.61
1903 2265 8.288208 GTCAACTTCTATCATATGCCAATCAAG 58.712 37.037 0.00 0.00 0.00 3.02
1904 2266 7.774625 TGTCAACTTCTATCATATGCCAATCAA 59.225 33.333 0.00 0.00 0.00 2.57
1905 2267 7.281841 TGTCAACTTCTATCATATGCCAATCA 58.718 34.615 0.00 0.00 0.00 2.57
1906 2268 7.734924 TGTCAACTTCTATCATATGCCAATC 57.265 36.000 0.00 0.00 0.00 2.67
1907 2269 7.176165 CCATGTCAACTTCTATCATATGCCAAT 59.824 37.037 0.00 0.00 0.00 3.16
1908 2270 6.487668 CCATGTCAACTTCTATCATATGCCAA 59.512 38.462 0.00 0.00 0.00 4.52
1909 2271 5.999600 CCATGTCAACTTCTATCATATGCCA 59.000 40.000 0.00 0.00 0.00 4.92
1910 2272 5.413833 CCCATGTCAACTTCTATCATATGCC 59.586 44.000 0.00 0.00 0.00 4.40
1911 2273 6.000219 ACCCATGTCAACTTCTATCATATGC 59.000 40.000 0.00 0.00 0.00 3.14
1912 2274 9.559732 TTTACCCATGTCAACTTCTATCATATG 57.440 33.333 0.00 0.00 0.00 1.78
1914 2276 9.391006 GTTTTACCCATGTCAACTTCTATCATA 57.609 33.333 0.00 0.00 0.00 2.15
1915 2277 8.109634 AGTTTTACCCATGTCAACTTCTATCAT 58.890 33.333 0.00 0.00 28.41 2.45
1916 2278 7.458397 AGTTTTACCCATGTCAACTTCTATCA 58.542 34.615 0.00 0.00 28.41 2.15
1917 2279 7.923414 AGTTTTACCCATGTCAACTTCTATC 57.077 36.000 0.00 0.00 28.41 2.08
1918 2280 7.827729 GGTAGTTTTACCCATGTCAACTTCTAT 59.172 37.037 0.00 0.00 43.06 1.98
1919 2281 7.163441 GGTAGTTTTACCCATGTCAACTTCTA 58.837 38.462 0.00 0.00 43.06 2.10
1920 2282 6.002082 GGTAGTTTTACCCATGTCAACTTCT 58.998 40.000 0.00 0.00 43.06 2.85
1921 2283 6.250344 GGTAGTTTTACCCATGTCAACTTC 57.750 41.667 0.00 0.00 43.06 3.01
1934 2296 8.206867 ACCGATATCTTTTAGGGGTAGTTTTAC 58.793 37.037 0.34 0.00 0.00 2.01
1935 2297 8.206189 CACCGATATCTTTTAGGGGTAGTTTTA 58.794 37.037 0.34 0.00 0.00 1.52
1936 2298 7.052248 CACCGATATCTTTTAGGGGTAGTTTT 58.948 38.462 0.34 0.00 0.00 2.43
1937 2299 6.157471 ACACCGATATCTTTTAGGGGTAGTTT 59.843 38.462 0.34 0.00 36.75 2.66
1938 2300 5.664457 ACACCGATATCTTTTAGGGGTAGTT 59.336 40.000 0.34 0.00 36.75 2.24
1939 2301 5.070047 CACACCGATATCTTTTAGGGGTAGT 59.930 44.000 1.65 0.00 36.29 2.73
1940 2302 5.303589 TCACACCGATATCTTTTAGGGGTAG 59.696 44.000 1.65 0.00 36.29 3.18
1941 2303 5.210430 TCACACCGATATCTTTTAGGGGTA 58.790 41.667 1.65 0.00 36.29 3.69
1942 2304 4.035112 TCACACCGATATCTTTTAGGGGT 58.965 43.478 0.34 0.00 39.54 4.95
1943 2305 4.682778 TCACACCGATATCTTTTAGGGG 57.317 45.455 0.34 0.00 0.00 4.79
1944 2306 6.017109 CCAATTCACACCGATATCTTTTAGGG 60.017 42.308 0.34 0.00 0.00 3.53
1945 2307 6.513393 GCCAATTCACACCGATATCTTTTAGG 60.513 42.308 0.34 0.00 0.00 2.69
1946 2308 6.260936 AGCCAATTCACACCGATATCTTTTAG 59.739 38.462 0.34 0.00 0.00 1.85
1947 2309 6.119536 AGCCAATTCACACCGATATCTTTTA 58.880 36.000 0.34 0.00 0.00 1.52
1948 2310 4.949856 AGCCAATTCACACCGATATCTTTT 59.050 37.500 0.34 0.00 0.00 2.27
1949 2311 4.526970 AGCCAATTCACACCGATATCTTT 58.473 39.130 0.34 0.00 0.00 2.52
1950 2312 4.156455 AGCCAATTCACACCGATATCTT 57.844 40.909 0.34 0.00 0.00 2.40
1951 2313 3.845781 AGCCAATTCACACCGATATCT 57.154 42.857 0.34 0.00 0.00 1.98
1952 2314 3.251004 GGAAGCCAATTCACACCGATATC 59.749 47.826 0.00 0.00 39.91 1.63
1953 2315 3.117888 AGGAAGCCAATTCACACCGATAT 60.118 43.478 0.00 0.00 39.91 1.63
1954 2316 2.238646 AGGAAGCCAATTCACACCGATA 59.761 45.455 0.00 0.00 39.91 2.92
1955 2317 1.004745 AGGAAGCCAATTCACACCGAT 59.995 47.619 0.00 0.00 39.91 4.18
1956 2318 0.400213 AGGAAGCCAATTCACACCGA 59.600 50.000 0.00 0.00 39.91 4.69
1957 2319 0.804989 GAGGAAGCCAATTCACACCG 59.195 55.000 0.00 0.00 39.91 4.94
1958 2320 1.909700 TGAGGAAGCCAATTCACACC 58.090 50.000 0.00 0.00 39.91 4.16
1959 2321 4.525912 AATTGAGGAAGCCAATTCACAC 57.474 40.909 0.00 0.00 39.28 3.82
1960 2322 5.070180 TGAAAATTGAGGAAGCCAATTCACA 59.930 36.000 0.00 0.00 41.71 3.58
1961 2323 5.540911 TGAAAATTGAGGAAGCCAATTCAC 58.459 37.500 0.00 0.00 41.71 3.18
1962 2324 5.305128 ACTGAAAATTGAGGAAGCCAATTCA 59.695 36.000 0.00 0.00 41.71 2.57
1963 2325 5.787380 ACTGAAAATTGAGGAAGCCAATTC 58.213 37.500 0.00 0.00 41.71 2.17
1964 2326 5.279657 GGACTGAAAATTGAGGAAGCCAATT 60.280 40.000 0.00 0.00 43.66 2.32
1965 2327 4.221482 GGACTGAAAATTGAGGAAGCCAAT 59.779 41.667 0.00 0.00 35.92 3.16
1966 2328 3.573967 GGACTGAAAATTGAGGAAGCCAA 59.426 43.478 0.00 0.00 0.00 4.52
1967 2329 3.157087 GGACTGAAAATTGAGGAAGCCA 58.843 45.455 0.00 0.00 0.00 4.75
1968 2330 2.493675 GGGACTGAAAATTGAGGAAGCC 59.506 50.000 0.00 0.00 0.00 4.35
1969 2331 2.493675 GGGGACTGAAAATTGAGGAAGC 59.506 50.000 0.00 0.00 0.00 3.86
1970 2332 4.039603 AGGGGACTGAAAATTGAGGAAG 57.960 45.455 0.00 0.00 41.13 3.46
1971 2333 4.407365 GAAGGGGACTGAAAATTGAGGAA 58.593 43.478 0.00 0.00 42.68 3.36
1972 2334 3.245264 GGAAGGGGACTGAAAATTGAGGA 60.245 47.826 0.00 0.00 42.68 3.71
1973 2335 3.092301 GGAAGGGGACTGAAAATTGAGG 58.908 50.000 0.00 0.00 42.68 3.86
1974 2336 3.092301 GGGAAGGGGACTGAAAATTGAG 58.908 50.000 0.00 0.00 42.68 3.02
1975 2337 2.448961 TGGGAAGGGGACTGAAAATTGA 59.551 45.455 0.00 0.00 42.68 2.57
1976 2338 2.562738 GTGGGAAGGGGACTGAAAATTG 59.437 50.000 0.00 0.00 42.68 2.32
1977 2339 2.450886 AGTGGGAAGGGGACTGAAAATT 59.549 45.455 0.00 0.00 42.68 1.82
1978 2340 2.073776 AGTGGGAAGGGGACTGAAAAT 58.926 47.619 0.00 0.00 42.68 1.82
1979 2341 1.529744 AGTGGGAAGGGGACTGAAAA 58.470 50.000 0.00 0.00 42.68 2.29
1980 2342 1.529744 AAGTGGGAAGGGGACTGAAA 58.470 50.000 0.00 0.00 42.68 2.69
1981 2343 2.426431 TAAGTGGGAAGGGGACTGAA 57.574 50.000 0.00 0.00 42.68 3.02
1982 2344 2.374170 GTTTAAGTGGGAAGGGGACTGA 59.626 50.000 0.00 0.00 42.68 3.41
1983 2345 2.375509 AGTTTAAGTGGGAAGGGGACTG 59.624 50.000 0.00 0.00 42.68 3.51
1985 2347 2.290768 GGAGTTTAAGTGGGAAGGGGAC 60.291 54.545 0.00 0.00 0.00 4.46
1986 2348 1.990327 GGAGTTTAAGTGGGAAGGGGA 59.010 52.381 0.00 0.00 0.00 4.81
1987 2349 1.005569 GGGAGTTTAAGTGGGAAGGGG 59.994 57.143 0.00 0.00 0.00 4.79
1988 2350 1.708551 TGGGAGTTTAAGTGGGAAGGG 59.291 52.381 0.00 0.00 0.00 3.95
1989 2351 3.739401 ATGGGAGTTTAAGTGGGAAGG 57.261 47.619 0.00 0.00 0.00 3.46
1990 2352 6.321435 GGATTAATGGGAGTTTAAGTGGGAAG 59.679 42.308 0.00 0.00 0.00 3.46
1991 2353 6.192044 GGATTAATGGGAGTTTAAGTGGGAA 58.808 40.000 0.00 0.00 0.00 3.97
1992 2354 5.340528 GGGATTAATGGGAGTTTAAGTGGGA 60.341 44.000 0.00 0.00 0.00 4.37
1993 2355 4.893524 GGGATTAATGGGAGTTTAAGTGGG 59.106 45.833 0.00 0.00 0.00 4.61
1994 2356 4.893524 GGGGATTAATGGGAGTTTAAGTGG 59.106 45.833 0.00 0.00 0.00 4.00
1995 2357 5.766590 AGGGGATTAATGGGAGTTTAAGTG 58.233 41.667 0.00 0.00 0.00 3.16
1996 2358 6.449041 TGTAGGGGATTAATGGGAGTTTAAGT 59.551 38.462 0.00 0.00 0.00 2.24
1997 2359 6.906848 TGTAGGGGATTAATGGGAGTTTAAG 58.093 40.000 0.00 0.00 0.00 1.85
1998 2360 6.911993 TGTAGGGGATTAATGGGAGTTTAA 57.088 37.500 0.00 0.00 0.00 1.52
1999 2361 6.449041 AGTTGTAGGGGATTAATGGGAGTTTA 59.551 38.462 0.00 0.00 0.00 2.01
2000 2362 5.255443 AGTTGTAGGGGATTAATGGGAGTTT 59.745 40.000 0.00 0.00 0.00 2.66
2001 2363 4.794067 AGTTGTAGGGGATTAATGGGAGTT 59.206 41.667 0.00 0.00 0.00 3.01
2002 2364 4.380791 AGTTGTAGGGGATTAATGGGAGT 58.619 43.478 0.00 0.00 0.00 3.85
2003 2365 6.509523 TTAGTTGTAGGGGATTAATGGGAG 57.490 41.667 0.00 0.00 0.00 4.30
2004 2366 6.217900 TGTTTAGTTGTAGGGGATTAATGGGA 59.782 38.462 0.00 0.00 0.00 4.37
2005 2367 6.428295 TGTTTAGTTGTAGGGGATTAATGGG 58.572 40.000 0.00 0.00 0.00 4.00
2006 2368 7.948034 TTGTTTAGTTGTAGGGGATTAATGG 57.052 36.000 0.00 0.00 0.00 3.16
2007 2369 8.966868 ACATTGTTTAGTTGTAGGGGATTAATG 58.033 33.333 0.00 0.00 0.00 1.90
2008 2370 9.185680 GACATTGTTTAGTTGTAGGGGATTAAT 57.814 33.333 0.00 0.00 0.00 1.40
2009 2371 8.387813 AGACATTGTTTAGTTGTAGGGGATTAA 58.612 33.333 0.00 0.00 0.00 1.40
2010 2372 7.827236 CAGACATTGTTTAGTTGTAGGGGATTA 59.173 37.037 0.00 0.00 0.00 1.75
2011 2373 6.659242 CAGACATTGTTTAGTTGTAGGGGATT 59.341 38.462 0.00 0.00 0.00 3.01
2012 2374 6.180472 CAGACATTGTTTAGTTGTAGGGGAT 58.820 40.000 0.00 0.00 0.00 3.85
2013 2375 5.514136 CCAGACATTGTTTAGTTGTAGGGGA 60.514 44.000 0.00 0.00 0.00 4.81
2014 2376 4.700213 CCAGACATTGTTTAGTTGTAGGGG 59.300 45.833 0.00 0.00 0.00 4.79
2015 2377 5.181245 CACCAGACATTGTTTAGTTGTAGGG 59.819 44.000 0.00 0.00 0.00 3.53
2016 2378 5.995282 TCACCAGACATTGTTTAGTTGTAGG 59.005 40.000 0.00 0.00 0.00 3.18
2017 2379 7.490962 TTCACCAGACATTGTTTAGTTGTAG 57.509 36.000 0.00 0.00 0.00 2.74
2018 2380 7.867305 TTTCACCAGACATTGTTTAGTTGTA 57.133 32.000 0.00 0.00 0.00 2.41
2033 2395 5.524646 ACGTTCGTTTTCTATTTTCACCAGA 59.475 36.000 0.00 0.00 0.00 3.86
2036 2398 5.982324 AGACGTTCGTTTTCTATTTTCACC 58.018 37.500 0.00 0.00 0.00 4.02
2037 2399 6.069563 GGAGACGTTCGTTTTCTATTTTCAC 58.930 40.000 0.00 0.00 0.00 3.18
2038 2400 5.754406 TGGAGACGTTCGTTTTCTATTTTCA 59.246 36.000 0.00 0.00 0.00 2.69
2046 2408 1.791204 GAGGTGGAGACGTTCGTTTTC 59.209 52.381 0.00 1.43 0.00 2.29
2062 2424 3.322466 CCAGGGCAAGTCGGAGGT 61.322 66.667 0.00 0.00 0.00 3.85
2071 2433 2.677228 GCTCTTAGGCCAGGGCAA 59.323 61.111 16.94 6.74 40.40 4.52
2100 2462 2.438392 CGGGTAGGGAATTTAGAGGCTT 59.562 50.000 0.00 0.00 0.00 4.35
2159 2521 2.998670 CTGTGTCAGAGATGAATTGCGT 59.001 45.455 0.00 0.00 32.44 5.24
2161 2523 4.453478 TGTTCTGTGTCAGAGATGAATTGC 59.547 41.667 0.00 0.00 41.75 3.56
2164 2526 9.107177 GATATTTGTTCTGTGTCAGAGATGAAT 57.893 33.333 0.00 4.83 41.75 2.57
2199 2561 7.340232 AGAGGGACCTTTTACGTTTAAGTTTTT 59.660 33.333 0.00 0.00 0.00 1.94
2210 2572 6.264744 TGATCTATGTAGAGGGACCTTTTACG 59.735 42.308 0.00 0.00 35.50 3.18
2211 2573 7.288158 ACTGATCTATGTAGAGGGACCTTTTAC 59.712 40.741 0.00 0.00 35.50 2.01
2220 2582 8.519526 GTTATCTGAACTGATCTATGTAGAGGG 58.480 40.741 0.00 0.00 35.50 4.30
2240 2603 4.073549 CCCTCCGTCGATCTAAGTTATCT 58.926 47.826 0.00 0.00 0.00 1.98
2243 2606 1.952296 GCCCTCCGTCGATCTAAGTTA 59.048 52.381 0.00 0.00 0.00 2.24
2280 2643 2.210116 GAGCACTTCCTCAACGTGAAA 58.790 47.619 0.00 0.00 0.00 2.69
2285 2648 0.861837 GTGTGAGCACTTCCTCAACG 59.138 55.000 1.99 0.00 42.98 4.10
2301 2664 0.532573 CTCTACCACTCGGCATGTGT 59.467 55.000 0.00 0.00 34.57 3.72
2302 2665 0.179100 CCTCTACCACTCGGCATGTG 60.179 60.000 0.00 0.56 34.57 3.21
2306 2669 1.982395 CACCCTCTACCACTCGGCA 60.982 63.158 0.00 0.00 34.57 5.69
2307 2670 0.682209 TACACCCTCTACCACTCGGC 60.682 60.000 0.00 0.00 34.57 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.