Multiple sequence alignment - TraesCS1A01G285100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G285100 chr1A 100.000 2915 0 0 1 2915 482378144 482375230 0.000000e+00 5384.0
1 TraesCS1A01G285100 chr1A 83.077 65 11 0 1698 1762 390709589 390709653 3.140000e-05 60.2
2 TraesCS1A01G285100 chr1D 92.270 1824 89 16 746 2558 382258294 382256512 0.000000e+00 2540.0
3 TraesCS1A01G285100 chr1D 91.304 184 11 3 567 747 382258510 382258329 2.240000e-61 246.0
4 TraesCS1A01G285100 chr1D 97.222 36 1 0 1727 1762 310815278 310815243 8.720000e-06 62.1
5 TraesCS1A01G285100 chr1D 94.444 36 2 0 1727 1762 432319823 432319858 4.060000e-04 56.5
6 TraesCS1A01G285100 chr1B 91.881 1207 68 20 965 2160 512181684 512180497 0.000000e+00 1659.0
7 TraesCS1A01G285100 chr1B 87.123 497 43 9 2183 2674 512179578 512179098 7.100000e-151 544.0
8 TraesCS1A01G285100 chr1B 89.427 227 20 1 2679 2901 424554042 424553816 1.710000e-72 283.0
9 TraesCS1A01G285100 chr1B 93.137 102 5 2 746 845 512182194 512182093 6.510000e-32 148.0
10 TraesCS1A01G285100 chr1B 98.592 71 1 0 852 922 512182028 512181958 3.050000e-25 126.0
11 TraesCS1A01G285100 chr1B 94.000 50 2 1 820 868 512182087 512182038 1.120000e-09 75.0
12 TraesCS1A01G285100 chr1B 83.077 65 11 0 1698 1762 583760701 583760765 3.140000e-05 60.2
13 TraesCS1A01G285100 chr1B 94.444 36 2 0 1727 1762 420685724 420685759 4.060000e-04 56.5
14 TraesCS1A01G285100 chr5D 84.434 424 61 3 1 420 371373877 371373455 2.090000e-111 412.0
15 TraesCS1A01G285100 chr5D 82.783 424 69 2 1 420 69619845 69619422 2.740000e-100 375.0
16 TraesCS1A01G285100 chr5D 81.647 425 64 9 2 420 112590226 112589810 1.000000e-89 340.0
17 TraesCS1A01G285100 chr5B 84.819 415 56 4 1 410 588208012 588208424 7.520000e-111 411.0
18 TraesCS1A01G285100 chr2A 83.535 413 64 1 2 410 504495622 504495210 1.640000e-102 383.0
19 TraesCS1A01G285100 chr2A 81.010 416 63 12 2 410 460415003 460415409 1.690000e-82 316.0
20 TraesCS1A01G285100 chr2A 87.097 248 22 7 2674 2915 196104378 196104621 3.700000e-69 272.0
21 TraesCS1A01G285100 chr4B 82.033 423 72 3 1 419 357210908 357210486 9.930000e-95 357.0
22 TraesCS1A01G285100 chr4B 86.475 244 26 4 2677 2915 14657337 14657096 8.010000e-66 261.0
23 TraesCS1A01G285100 chr4B 83.333 78 10 3 424 499 554568457 554568381 5.210000e-08 69.4
24 TraesCS1A01G285100 chr4D 82.494 417 62 10 2 410 135650856 135650443 3.570000e-94 355.0
25 TraesCS1A01G285100 chr4D 81.840 424 71 3 1 419 251849246 251848824 4.620000e-93 351.0
26 TraesCS1A01G285100 chr6A 88.889 243 22 2 2677 2915 29792341 29792100 7.900000e-76 294.0
27 TraesCS1A01G285100 chr6D 87.903 248 20 6 2674 2915 44930811 44931054 1.710000e-72 283.0
28 TraesCS1A01G285100 chr7D 86.822 258 23 7 2664 2915 577701746 577701998 7.960000e-71 278.0
29 TraesCS1A01G285100 chr7D 86.853 251 26 4 2670 2914 600492855 600492606 1.030000e-69 274.0
30 TraesCS1A01G285100 chr3B 87.552 241 21 6 2677 2911 719921188 719920951 1.330000e-68 270.0
31 TraesCS1A01G285100 chr4A 86.640 247 26 4 2674 2915 585682578 585682822 1.720000e-67 267.0
32 TraesCS1A01G285100 chr4A 82.927 82 11 3 418 497 311627343 311627423 1.450000e-08 71.3
33 TraesCS1A01G285100 chr7A 86.022 93 11 2 412 504 285054906 285054996 6.650000e-17 99.0
34 TraesCS1A01G285100 chr2B 85.185 81 12 0 424 504 424995577 424995497 1.860000e-12 84.2
35 TraesCS1A01G285100 chr2B 97.297 37 1 0 1957 1993 660979594 660979630 2.430000e-06 63.9
36 TraesCS1A01G285100 chr2D 84.706 85 10 3 421 504 512508561 512508643 6.700000e-12 82.4
37 TraesCS1A01G285100 chr5A 85.333 75 9 2 431 504 242089113 242089040 3.120000e-10 76.8
38 TraesCS1A01G285100 chr5A 81.690 71 13 0 1698 1768 696925364 696925294 3.140000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G285100 chr1A 482375230 482378144 2914 True 5384.0 5384 100.0000 1 2915 1 chr1A.!!$R1 2914
1 TraesCS1A01G285100 chr1D 382256512 382258510 1998 True 1393.0 2540 91.7870 567 2558 2 chr1D.!!$R2 1991
2 TraesCS1A01G285100 chr1B 512179098 512182194 3096 True 510.4 1659 92.9466 746 2674 5 chr1B.!!$R2 1928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.035439 ACGCCTTACCATCAAGGGTG 60.035 55.0 4.18 0.0 44.56 4.61 F
444 445 0.035458 AAGTCAAGACCCTCGCAAGG 59.965 55.0 0.00 0.0 42.95 3.61 F
563 564 0.036306 AAACCCATCGGCGTTCTCTT 59.964 50.0 6.85 0.0 0.00 2.85 F
564 565 0.391263 AACCCATCGGCGTTCTCTTC 60.391 55.0 6.85 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1574 1906 0.739112 CGTTTGCTGCCTCCTCTCTC 60.739 60.000 0.00 0.0 0.0 3.20 R
1870 2202 2.035442 GCTTCTTCCTCACCACCGC 61.035 63.158 0.00 0.0 0.0 5.68 R
1907 2239 2.235155 TGCGCCAGGTTTAATCAGTCTA 59.765 45.455 4.18 0.0 0.0 2.59 R
2361 3600 2.385417 ACCCAAAATAACCTCCCCACAT 59.615 45.455 0.00 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.000447 GTGGAACATCGAACTACAGGC 59.000 52.381 0.00 0.00 44.52 4.85
21 22 1.066430 TGGAACATCGAACTACAGGCC 60.066 52.381 0.00 0.00 0.00 5.19
22 23 1.207329 GGAACATCGAACTACAGGCCT 59.793 52.381 0.00 0.00 0.00 5.19
23 24 2.354805 GGAACATCGAACTACAGGCCTT 60.355 50.000 0.00 0.00 0.00 4.35
24 25 2.674796 ACATCGAACTACAGGCCTTC 57.325 50.000 0.00 0.00 0.00 3.46
25 26 1.207329 ACATCGAACTACAGGCCTTCC 59.793 52.381 0.00 0.00 0.00 3.46
26 27 1.207089 CATCGAACTACAGGCCTTCCA 59.793 52.381 0.00 0.00 33.74 3.53
27 28 0.895530 TCGAACTACAGGCCTTCCAG 59.104 55.000 0.00 2.47 33.74 3.86
28 29 0.741221 CGAACTACAGGCCTTCCAGC 60.741 60.000 0.00 0.00 33.74 4.85
29 30 0.615850 GAACTACAGGCCTTCCAGCT 59.384 55.000 0.00 0.00 33.74 4.24
30 31 0.326264 AACTACAGGCCTTCCAGCTG 59.674 55.000 0.00 6.78 33.74 4.24
31 32 1.222936 CTACAGGCCTTCCAGCTGG 59.777 63.158 27.87 27.87 33.74 4.85
32 33 1.229496 TACAGGCCTTCCAGCTGGA 60.229 57.895 32.00 32.00 43.73 3.86
33 34 1.267574 TACAGGCCTTCCAGCTGGAG 61.268 60.000 33.16 24.23 46.36 3.86
34 35 2.204059 AGGCCTTCCAGCTGGAGT 60.204 61.111 33.16 15.32 46.36 3.85
35 36 1.849823 AGGCCTTCCAGCTGGAGTT 60.850 57.895 33.16 16.35 46.36 3.01
36 37 1.377856 GGCCTTCCAGCTGGAGTTC 60.378 63.158 33.16 24.00 46.36 3.01
37 38 1.376466 GCCTTCCAGCTGGAGTTCA 59.624 57.895 33.16 19.17 46.36 3.18
38 39 0.250901 GCCTTCCAGCTGGAGTTCAA 60.251 55.000 33.16 18.79 46.36 2.69
39 40 1.818642 CCTTCCAGCTGGAGTTCAAG 58.181 55.000 33.16 26.15 46.36 3.02
40 41 1.349026 CCTTCCAGCTGGAGTTCAAGA 59.651 52.381 33.16 17.33 46.36 3.02
41 42 2.421619 CTTCCAGCTGGAGTTCAAGAC 58.578 52.381 33.16 0.00 46.36 3.01
42 43 1.423584 TCCAGCTGGAGTTCAAGACA 58.576 50.000 32.00 5.23 39.78 3.41
43 44 1.768275 TCCAGCTGGAGTTCAAGACAA 59.232 47.619 32.00 4.64 39.78 3.18
44 45 2.149578 CCAGCTGGAGTTCAAGACAAG 58.850 52.381 29.88 0.00 37.39 3.16
45 46 1.534595 CAGCTGGAGTTCAAGACAAGC 59.465 52.381 5.57 0.00 33.90 4.01
46 47 1.141657 AGCTGGAGTTCAAGACAAGCA 59.858 47.619 0.00 0.00 35.27 3.91
47 48 1.534595 GCTGGAGTTCAAGACAAGCAG 59.465 52.381 0.00 0.00 33.90 4.24
48 49 2.149578 CTGGAGTTCAAGACAAGCAGG 58.850 52.381 0.00 0.00 0.00 4.85
49 50 1.202806 TGGAGTTCAAGACAAGCAGGG 60.203 52.381 0.00 0.00 0.00 4.45
50 51 1.202818 GGAGTTCAAGACAAGCAGGGT 60.203 52.381 0.00 0.00 0.00 4.34
51 52 2.147150 GAGTTCAAGACAAGCAGGGTC 58.853 52.381 0.00 0.00 35.50 4.46
52 53 1.490490 AGTTCAAGACAAGCAGGGTCA 59.510 47.619 5.42 0.00 37.74 4.02
53 54 2.107204 AGTTCAAGACAAGCAGGGTCAT 59.893 45.455 5.42 0.00 37.74 3.06
54 55 2.479566 TCAAGACAAGCAGGGTCATC 57.520 50.000 5.42 0.00 37.74 2.92
55 56 1.699083 TCAAGACAAGCAGGGTCATCA 59.301 47.619 5.42 0.00 37.74 3.07
56 57 2.106338 TCAAGACAAGCAGGGTCATCAA 59.894 45.455 5.42 0.00 37.74 2.57
57 58 2.486472 AGACAAGCAGGGTCATCAAG 57.514 50.000 5.42 0.00 37.74 3.02
58 59 1.004044 AGACAAGCAGGGTCATCAAGG 59.996 52.381 5.42 0.00 37.74 3.61
59 60 0.038744 ACAAGCAGGGTCATCAAGGG 59.961 55.000 0.00 0.00 0.00 3.95
60 61 0.038744 CAAGCAGGGTCATCAAGGGT 59.961 55.000 0.00 0.00 0.00 4.34
61 62 0.038744 AAGCAGGGTCATCAAGGGTG 59.961 55.000 0.00 0.00 0.00 4.61
62 63 1.136329 AGCAGGGTCATCAAGGGTGT 61.136 55.000 0.00 0.00 0.00 4.16
63 64 0.962356 GCAGGGTCATCAAGGGTGTG 60.962 60.000 0.00 0.00 0.00 3.82
64 65 0.322816 CAGGGTCATCAAGGGTGTGG 60.323 60.000 0.00 0.00 0.00 4.17
65 66 1.678970 GGGTCATCAAGGGTGTGGC 60.679 63.158 0.00 0.00 0.00 5.01
66 67 1.678970 GGTCATCAAGGGTGTGGCC 60.679 63.158 0.00 0.00 0.00 5.36
75 76 4.052518 GGTGTGGCCCTGGCTGAT 62.053 66.667 8.29 0.00 41.60 2.90
76 77 2.036256 GTGTGGCCCTGGCTGATT 59.964 61.111 8.29 0.00 41.60 2.57
77 78 1.607467 GTGTGGCCCTGGCTGATTT 60.607 57.895 8.29 0.00 41.60 2.17
78 79 1.155859 TGTGGCCCTGGCTGATTTT 59.844 52.632 8.29 0.00 41.60 1.82
79 80 1.186917 TGTGGCCCTGGCTGATTTTG 61.187 55.000 8.29 0.00 41.60 2.44
80 81 1.155859 TGGCCCTGGCTGATTTTGT 59.844 52.632 8.29 0.00 41.60 2.83
81 82 1.186917 TGGCCCTGGCTGATTTTGTG 61.187 55.000 8.29 0.00 41.60 3.33
82 83 0.899717 GGCCCTGGCTGATTTTGTGA 60.900 55.000 8.29 0.00 41.60 3.58
83 84 0.244721 GCCCTGGCTGATTTTGTGAC 59.755 55.000 0.00 0.00 38.26 3.67
84 85 0.523072 CCCTGGCTGATTTTGTGACG 59.477 55.000 0.00 0.00 0.00 4.35
85 86 0.523072 CCTGGCTGATTTTGTGACGG 59.477 55.000 0.00 0.00 0.00 4.79
86 87 1.522668 CTGGCTGATTTTGTGACGGA 58.477 50.000 0.00 0.00 0.00 4.69
87 88 1.466167 CTGGCTGATTTTGTGACGGAG 59.534 52.381 0.00 0.00 0.00 4.63
99 100 4.056805 ACGGAGTGGATGGATGCT 57.943 55.556 0.00 0.00 42.51 3.79
100 101 1.826024 ACGGAGTGGATGGATGCTC 59.174 57.895 0.00 0.00 42.51 4.26
101 102 1.070445 CGGAGTGGATGGATGCTCC 59.930 63.158 0.00 0.00 42.90 4.70
102 103 1.453669 GGAGTGGATGGATGCTCCC 59.546 63.158 0.00 0.00 41.08 4.30
103 104 1.070445 GAGTGGATGGATGCTCCCG 59.930 63.158 0.50 0.00 35.03 5.14
104 105 1.383109 AGTGGATGGATGCTCCCGA 60.383 57.895 0.50 0.00 35.03 5.14
105 106 0.765903 AGTGGATGGATGCTCCCGAT 60.766 55.000 0.50 0.00 35.03 4.18
106 107 0.321122 GTGGATGGATGCTCCCGATC 60.321 60.000 0.50 0.00 35.03 3.69
107 108 1.079543 GGATGGATGCTCCCGATCG 60.080 63.158 8.51 8.51 35.03 3.69
108 109 1.079543 GATGGATGCTCCCGATCGG 60.080 63.158 27.65 27.65 35.03 4.18
109 110 1.533994 ATGGATGCTCCCGATCGGA 60.534 57.895 35.42 19.41 38.83 4.55
116 117 4.137615 TCCCGATCGGAGGCTGGA 62.138 66.667 35.42 19.33 34.86 3.86
117 118 2.919856 CCCGATCGGAGGCTGGAT 60.920 66.667 35.42 0.00 37.50 3.41
118 119 2.341543 CCGATCGGAGGCTGGATG 59.658 66.667 30.62 0.00 37.50 3.51
119 120 2.203082 CCGATCGGAGGCTGGATGA 61.203 63.158 30.62 0.00 37.50 2.92
120 121 1.288439 CGATCGGAGGCTGGATGAG 59.712 63.158 7.38 0.00 0.00 2.90
121 122 1.670590 GATCGGAGGCTGGATGAGG 59.329 63.158 0.00 0.00 0.00 3.86
122 123 1.825281 GATCGGAGGCTGGATGAGGG 61.825 65.000 0.00 0.00 0.00 4.30
123 124 4.247380 CGGAGGCTGGATGAGGGC 62.247 72.222 0.00 0.00 0.00 5.19
124 125 3.883549 GGAGGCTGGATGAGGGCC 61.884 72.222 0.00 0.00 45.57 5.80
129 130 2.914289 CTGGATGAGGGCCAGTCC 59.086 66.667 6.18 10.65 46.19 3.85
139 140 4.767255 GCCAGTCCCTGACGCCTG 62.767 72.222 0.00 0.00 37.67 4.85
140 141 4.087892 CCAGTCCCTGACGCCTGG 62.088 72.222 0.00 0.00 37.67 4.45
141 142 4.767255 CAGTCCCTGACGCCTGGC 62.767 72.222 9.11 9.11 37.67 4.85
158 159 4.778415 CGACGAGGTGCCTGACGG 62.778 72.222 0.00 0.00 0.00 4.79
168 169 2.124983 CCTGACGGCTGGGTCATG 60.125 66.667 6.22 0.00 45.23 3.07
169 170 2.821366 CTGACGGCTGGGTCATGC 60.821 66.667 0.00 0.00 45.23 4.06
170 171 3.610619 CTGACGGCTGGGTCATGCA 62.611 63.158 0.00 0.00 45.23 3.96
171 172 3.127533 GACGGCTGGGTCATGCAC 61.128 66.667 0.00 0.00 36.91 4.57
172 173 3.612247 GACGGCTGGGTCATGCACT 62.612 63.158 0.00 0.00 36.91 4.40
173 174 2.360350 CGGCTGGGTCATGCACTT 60.360 61.111 0.00 0.00 0.00 3.16
174 175 2.401766 CGGCTGGGTCATGCACTTC 61.402 63.158 0.00 0.00 0.00 3.01
175 176 2.401766 GGCTGGGTCATGCACTTCG 61.402 63.158 0.00 0.00 0.00 3.79
176 177 1.375908 GCTGGGTCATGCACTTCGA 60.376 57.895 0.00 0.00 0.00 3.71
177 178 1.639298 GCTGGGTCATGCACTTCGAC 61.639 60.000 0.00 0.00 0.00 4.20
178 179 1.354337 CTGGGTCATGCACTTCGACG 61.354 60.000 0.00 0.00 0.00 5.12
179 180 2.100631 GGGTCATGCACTTCGACGG 61.101 63.158 0.00 0.00 0.00 4.79
180 181 2.740714 GGTCATGCACTTCGACGGC 61.741 63.158 0.00 0.00 0.00 5.68
181 182 2.809174 TCATGCACTTCGACGGCG 60.809 61.111 2.87 2.87 39.35 6.46
182 183 4.505217 CATGCACTTCGACGGCGC 62.505 66.667 5.31 0.00 37.46 6.53
186 187 3.479269 CACTTCGACGGCGCCTTC 61.479 66.667 26.68 24.38 37.46 3.46
216 217 4.530857 GCGGGGGATGGAGTCGTG 62.531 72.222 0.00 0.00 0.00 4.35
217 218 4.530857 CGGGGGATGGAGTCGTGC 62.531 72.222 0.00 0.00 0.00 5.34
218 219 3.083997 GGGGGATGGAGTCGTGCT 61.084 66.667 0.00 0.00 0.00 4.40
219 220 2.501610 GGGGATGGAGTCGTGCTC 59.498 66.667 2.04 2.04 43.39 4.26
220 221 2.359169 GGGGATGGAGTCGTGCTCA 61.359 63.158 10.75 0.45 45.88 4.26
221 222 1.690219 GGGGATGGAGTCGTGCTCAT 61.690 60.000 10.75 4.25 45.88 2.90
222 223 0.249657 GGGATGGAGTCGTGCTCATC 60.250 60.000 10.75 10.54 45.88 2.92
223 224 0.749649 GGATGGAGTCGTGCTCATCT 59.250 55.000 10.75 0.00 45.88 2.90
224 225 1.269517 GGATGGAGTCGTGCTCATCTC 60.270 57.143 10.75 0.00 45.88 2.75
225 226 1.406898 GATGGAGTCGTGCTCATCTCA 59.593 52.381 10.75 2.09 45.88 3.27
226 227 0.528017 TGGAGTCGTGCTCATCTCAC 59.472 55.000 10.75 0.00 45.88 3.51
227 228 0.179124 GGAGTCGTGCTCATCTCACC 60.179 60.000 10.75 0.00 45.88 4.02
228 229 0.528017 GAGTCGTGCTCATCTCACCA 59.472 55.000 5.21 0.00 43.58 4.17
229 230 0.529833 AGTCGTGCTCATCTCACCAG 59.470 55.000 0.00 0.00 0.00 4.00
230 231 1.080995 GTCGTGCTCATCTCACCAGC 61.081 60.000 0.00 0.00 0.00 4.85
231 232 1.812922 CGTGCTCATCTCACCAGCC 60.813 63.158 0.00 0.00 31.68 4.85
232 233 1.297689 GTGCTCATCTCACCAGCCA 59.702 57.895 0.00 0.00 31.68 4.75
233 234 0.321919 GTGCTCATCTCACCAGCCAA 60.322 55.000 0.00 0.00 31.68 4.52
234 235 0.035725 TGCTCATCTCACCAGCCAAG 60.036 55.000 0.00 0.00 31.68 3.61
235 236 0.747283 GCTCATCTCACCAGCCAAGG 60.747 60.000 0.00 0.00 0.00 3.61
236 237 0.907486 CTCATCTCACCAGCCAAGGA 59.093 55.000 0.00 0.00 0.00 3.36
237 238 0.615331 TCATCTCACCAGCCAAGGAC 59.385 55.000 0.00 0.00 0.00 3.85
238 239 0.325933 CATCTCACCAGCCAAGGACA 59.674 55.000 0.00 0.00 0.00 4.02
239 240 1.067295 ATCTCACCAGCCAAGGACAA 58.933 50.000 0.00 0.00 0.00 3.18
240 241 0.397941 TCTCACCAGCCAAGGACAAG 59.602 55.000 0.00 0.00 0.00 3.16
241 242 1.228245 TCACCAGCCAAGGACAAGC 60.228 57.895 0.00 0.00 0.00 4.01
242 243 1.228367 CACCAGCCAAGGACAAGCT 60.228 57.895 0.00 0.00 37.32 3.74
243 244 1.073897 ACCAGCCAAGGACAAGCTC 59.926 57.895 0.00 0.00 33.70 4.09
244 245 1.377994 CCAGCCAAGGACAAGCTCT 59.622 57.895 0.00 0.00 33.70 4.09
245 246 0.615331 CCAGCCAAGGACAAGCTCTA 59.385 55.000 0.00 0.00 33.70 2.43
246 247 1.677217 CCAGCCAAGGACAAGCTCTAC 60.677 57.143 0.00 0.00 33.70 2.59
247 248 1.277557 CAGCCAAGGACAAGCTCTACT 59.722 52.381 0.00 0.00 33.70 2.57
248 249 2.497675 CAGCCAAGGACAAGCTCTACTA 59.502 50.000 0.00 0.00 33.70 1.82
249 250 3.133721 CAGCCAAGGACAAGCTCTACTAT 59.866 47.826 0.00 0.00 33.70 2.12
250 251 3.133721 AGCCAAGGACAAGCTCTACTATG 59.866 47.826 0.00 0.00 28.40 2.23
251 252 3.118592 GCCAAGGACAAGCTCTACTATGT 60.119 47.826 0.00 0.00 0.00 2.29
252 253 4.624125 GCCAAGGACAAGCTCTACTATGTT 60.624 45.833 0.00 0.00 0.00 2.71
253 254 4.872691 CCAAGGACAAGCTCTACTATGTTG 59.127 45.833 0.00 0.00 0.00 3.33
254 255 5.482908 CAAGGACAAGCTCTACTATGTTGT 58.517 41.667 0.00 0.00 34.08 3.32
255 256 5.078411 AGGACAAGCTCTACTATGTTGTG 57.922 43.478 0.00 0.00 31.57 3.33
256 257 3.619038 GGACAAGCTCTACTATGTTGTGC 59.381 47.826 0.00 0.00 33.26 4.57
257 258 4.245660 GACAAGCTCTACTATGTTGTGCA 58.754 43.478 0.00 0.00 32.31 4.57
258 259 4.248859 ACAAGCTCTACTATGTTGTGCAG 58.751 43.478 0.00 4.20 32.31 4.41
259 260 2.898705 AGCTCTACTATGTTGTGCAGC 58.101 47.619 0.00 0.00 32.31 5.25
260 261 2.499289 AGCTCTACTATGTTGTGCAGCT 59.501 45.455 0.00 0.00 33.92 4.24
261 262 3.055530 AGCTCTACTATGTTGTGCAGCTT 60.056 43.478 0.00 0.00 34.62 3.74
262 263 3.686726 GCTCTACTATGTTGTGCAGCTTT 59.313 43.478 0.00 0.00 30.87 3.51
263 264 4.436584 GCTCTACTATGTTGTGCAGCTTTG 60.437 45.833 0.00 0.00 30.87 2.77
264 265 2.712057 ACTATGTTGTGCAGCTTTGC 57.288 45.000 0.00 0.00 0.00 3.68
265 266 2.233271 ACTATGTTGTGCAGCTTTGCT 58.767 42.857 0.00 0.00 40.77 3.91
266 267 2.624838 ACTATGTTGTGCAGCTTTGCTT 59.375 40.909 0.00 0.00 36.40 3.91
267 268 2.144482 ATGTTGTGCAGCTTTGCTTC 57.856 45.000 0.00 0.00 36.40 3.86
268 269 0.102844 TGTTGTGCAGCTTTGCTTCC 59.897 50.000 0.00 0.00 36.40 3.46
269 270 0.102844 GTTGTGCAGCTTTGCTTCCA 59.897 50.000 0.00 0.00 36.40 3.53
270 271 0.386476 TTGTGCAGCTTTGCTTCCAG 59.614 50.000 0.00 0.00 36.40 3.86
271 272 1.372623 GTGCAGCTTTGCTTCCAGC 60.373 57.895 0.00 0.00 42.82 4.85
282 283 2.998316 GCTTCCAGCATAGAAGGTCT 57.002 50.000 11.05 0.00 41.89 3.85
283 284 2.832563 GCTTCCAGCATAGAAGGTCTC 58.167 52.381 11.05 0.00 41.89 3.36
284 285 2.484594 GCTTCCAGCATAGAAGGTCTCC 60.485 54.545 11.05 0.00 41.89 3.71
285 286 2.856760 TCCAGCATAGAAGGTCTCCT 57.143 50.000 0.00 0.00 33.87 3.69
286 287 3.973472 TCCAGCATAGAAGGTCTCCTA 57.027 47.619 0.00 0.00 31.13 2.94
287 288 3.567397 TCCAGCATAGAAGGTCTCCTAC 58.433 50.000 0.00 0.00 31.13 3.18
288 289 3.052869 TCCAGCATAGAAGGTCTCCTACA 60.053 47.826 0.00 0.00 31.13 2.74
289 290 3.706594 CCAGCATAGAAGGTCTCCTACAA 59.293 47.826 0.00 0.00 31.13 2.41
290 291 4.442192 CCAGCATAGAAGGTCTCCTACAAC 60.442 50.000 0.00 0.00 31.13 3.32
291 292 4.160439 CAGCATAGAAGGTCTCCTACAACA 59.840 45.833 0.00 0.00 31.13 3.33
292 293 4.965532 AGCATAGAAGGTCTCCTACAACAT 59.034 41.667 0.00 0.00 31.13 2.71
293 294 5.069781 AGCATAGAAGGTCTCCTACAACATC 59.930 44.000 0.00 0.00 31.13 3.06
294 295 5.163405 GCATAGAAGGTCTCCTACAACATCA 60.163 44.000 0.00 0.00 31.13 3.07
295 296 4.810191 AGAAGGTCTCCTACAACATCAC 57.190 45.455 0.00 0.00 31.13 3.06
296 297 3.193691 AGAAGGTCTCCTACAACATCACG 59.806 47.826 0.00 0.00 31.13 4.35
297 298 1.825474 AGGTCTCCTACAACATCACGG 59.175 52.381 0.00 0.00 28.47 4.94
298 299 1.822990 GGTCTCCTACAACATCACGGA 59.177 52.381 0.00 0.00 0.00 4.69
299 300 2.159226 GGTCTCCTACAACATCACGGAG 60.159 54.545 0.00 0.00 42.00 4.63
300 301 6.883893 AGGTCTCCTACAACATCACGGAGT 62.884 50.000 0.00 0.00 41.50 3.85
301 302 3.693085 GTCTCCTACAACATCACGGAGTA 59.307 47.826 0.00 0.00 41.61 2.59
302 303 4.338682 GTCTCCTACAACATCACGGAGTAT 59.661 45.833 0.00 0.00 41.61 2.12
303 304 4.338400 TCTCCTACAACATCACGGAGTATG 59.662 45.833 0.00 0.00 41.61 2.39
304 305 4.274978 TCCTACAACATCACGGAGTATGA 58.725 43.478 0.00 0.00 41.61 2.15
305 306 4.338400 TCCTACAACATCACGGAGTATGAG 59.662 45.833 0.00 0.00 41.61 2.90
306 307 3.526931 ACAACATCACGGAGTATGAGG 57.473 47.619 0.00 0.00 41.61 3.86
307 308 2.168521 ACAACATCACGGAGTATGAGGG 59.831 50.000 0.00 0.00 41.61 4.30
308 309 0.753262 ACATCACGGAGTATGAGGGC 59.247 55.000 0.00 0.00 41.61 5.19
309 310 1.043816 CATCACGGAGTATGAGGGCT 58.956 55.000 0.00 0.00 41.61 5.19
310 311 1.414181 CATCACGGAGTATGAGGGCTT 59.586 52.381 0.00 0.00 41.61 4.35
311 312 0.824109 TCACGGAGTATGAGGGCTTG 59.176 55.000 0.00 0.00 41.61 4.01
312 313 0.824109 CACGGAGTATGAGGGCTTGA 59.176 55.000 0.00 0.00 41.61 3.02
313 314 1.414181 CACGGAGTATGAGGGCTTGAT 59.586 52.381 0.00 0.00 41.61 2.57
314 315 2.119495 ACGGAGTATGAGGGCTTGATT 58.881 47.619 0.00 0.00 41.94 2.57
315 316 2.158900 ACGGAGTATGAGGGCTTGATTG 60.159 50.000 0.00 0.00 41.94 2.67
316 317 2.225467 GGAGTATGAGGGCTTGATTGC 58.775 52.381 0.00 0.00 0.00 3.56
317 318 2.158696 GGAGTATGAGGGCTTGATTGCT 60.159 50.000 0.00 0.00 0.00 3.91
318 319 2.877168 GAGTATGAGGGCTTGATTGCTG 59.123 50.000 0.00 0.00 0.00 4.41
319 320 1.952296 GTATGAGGGCTTGATTGCTGG 59.048 52.381 0.00 0.00 0.00 4.85
320 321 1.041447 ATGAGGGCTTGATTGCTGGC 61.041 55.000 0.00 0.00 0.00 4.85
321 322 2.363406 AGGGCTTGATTGCTGGCC 60.363 61.111 0.00 0.00 45.34 5.36
322 323 2.363406 GGGCTTGATTGCTGGCCT 60.363 61.111 3.32 0.00 43.62 5.19
323 324 2.421399 GGGCTTGATTGCTGGCCTC 61.421 63.158 3.32 0.00 43.62 4.70
324 325 1.679977 GGCTTGATTGCTGGCCTCA 60.680 57.895 3.32 0.00 41.20 3.86
325 326 1.664321 GGCTTGATTGCTGGCCTCAG 61.664 60.000 3.32 0.00 43.64 3.35
326 327 1.664321 GCTTGATTGCTGGCCTCAGG 61.664 60.000 3.32 0.00 41.19 3.86
327 328 1.000521 TTGATTGCTGGCCTCAGGG 60.001 57.895 3.32 0.00 41.19 4.45
350 351 4.299796 GCTGCCCTGGGGGTCAAA 62.300 66.667 16.03 0.00 46.51 2.69
351 352 2.283173 CTGCCCTGGGGGTCAAAC 60.283 66.667 16.03 0.00 46.51 2.93
352 353 4.278513 TGCCCTGGGGGTCAAACG 62.279 66.667 16.03 0.00 46.51 3.60
359 360 3.991999 GGGGTCAAACGCCTTACC 58.008 61.111 5.97 0.00 46.55 2.85
360 361 1.073548 GGGGTCAAACGCCTTACCA 59.926 57.895 5.97 0.00 46.55 3.25
361 362 0.323087 GGGGTCAAACGCCTTACCAT 60.323 55.000 5.97 0.00 46.55 3.55
362 363 1.092348 GGGTCAAACGCCTTACCATC 58.908 55.000 0.00 0.00 33.46 3.51
363 364 1.612199 GGGTCAAACGCCTTACCATCA 60.612 52.381 0.00 0.00 33.46 3.07
364 365 2.156098 GGTCAAACGCCTTACCATCAA 58.844 47.619 0.00 0.00 32.04 2.57
365 366 2.161609 GGTCAAACGCCTTACCATCAAG 59.838 50.000 0.00 0.00 32.04 3.02
366 367 2.161609 GTCAAACGCCTTACCATCAAGG 59.838 50.000 0.00 0.00 46.74 3.61
367 368 1.472480 CAAACGCCTTACCATCAAGGG 59.528 52.381 4.18 0.00 44.56 3.95
368 369 0.696501 AACGCCTTACCATCAAGGGT 59.303 50.000 4.18 0.00 44.56 4.34
369 370 0.035439 ACGCCTTACCATCAAGGGTG 60.035 55.000 4.18 0.00 44.56 4.61
370 371 0.251916 CGCCTTACCATCAAGGGTGA 59.748 55.000 4.18 0.00 44.56 4.02
371 372 1.751437 GCCTTACCATCAAGGGTGAC 58.249 55.000 4.18 0.00 44.56 3.67
372 373 1.282157 GCCTTACCATCAAGGGTGACT 59.718 52.381 4.18 0.00 44.56 3.41
373 374 2.681097 GCCTTACCATCAAGGGTGACTC 60.681 54.545 4.18 0.00 44.56 3.36
374 375 2.840651 CCTTACCATCAAGGGTGACTCT 59.159 50.000 0.00 0.00 42.39 3.24
375 376 3.264450 CCTTACCATCAAGGGTGACTCTT 59.736 47.826 0.00 0.00 42.39 2.85
376 377 4.469945 CCTTACCATCAAGGGTGACTCTTA 59.530 45.833 0.00 0.00 42.39 2.10
377 378 5.395768 CCTTACCATCAAGGGTGACTCTTAG 60.396 48.000 0.00 0.00 42.39 2.18
378 379 2.237392 ACCATCAAGGGTGACTCTTAGC 59.763 50.000 0.00 0.00 43.89 3.09
379 380 2.503356 CCATCAAGGGTGACTCTTAGCT 59.497 50.000 0.00 0.00 36.31 3.32
380 381 3.431486 CCATCAAGGGTGACTCTTAGCTC 60.431 52.174 0.00 0.00 36.31 4.09
381 382 2.180276 TCAAGGGTGACTCTTAGCTCC 58.820 52.381 0.00 0.00 0.00 4.70
382 383 2.183679 CAAGGGTGACTCTTAGCTCCT 58.816 52.381 0.00 0.00 0.00 3.69
383 384 2.153034 AGGGTGACTCTTAGCTCCTC 57.847 55.000 0.00 0.00 0.00 3.71
384 385 0.741915 GGGTGACTCTTAGCTCCTCG 59.258 60.000 0.00 0.00 0.00 4.63
385 386 1.465794 GGTGACTCTTAGCTCCTCGT 58.534 55.000 0.00 0.00 0.00 4.18
386 387 1.402613 GGTGACTCTTAGCTCCTCGTC 59.597 57.143 0.00 0.00 0.00 4.20
387 388 2.085320 GTGACTCTTAGCTCCTCGTCA 58.915 52.381 0.00 0.00 0.00 4.35
388 389 2.488545 GTGACTCTTAGCTCCTCGTCAA 59.511 50.000 9.50 0.00 33.75 3.18
389 390 2.488545 TGACTCTTAGCTCCTCGTCAAC 59.511 50.000 0.00 0.00 0.00 3.18
390 391 2.750712 GACTCTTAGCTCCTCGTCAACT 59.249 50.000 0.00 0.00 0.00 3.16
391 392 3.158676 ACTCTTAGCTCCTCGTCAACTT 58.841 45.455 0.00 0.00 0.00 2.66
392 393 3.191791 ACTCTTAGCTCCTCGTCAACTTC 59.808 47.826 0.00 0.00 0.00 3.01
393 394 3.422796 TCTTAGCTCCTCGTCAACTTCT 58.577 45.455 0.00 0.00 0.00 2.85
394 395 3.440872 TCTTAGCTCCTCGTCAACTTCTC 59.559 47.826 0.00 0.00 0.00 2.87
395 396 1.917872 AGCTCCTCGTCAACTTCTCT 58.082 50.000 0.00 0.00 0.00 3.10
396 397 3.074675 AGCTCCTCGTCAACTTCTCTA 57.925 47.619 0.00 0.00 0.00 2.43
397 398 3.422796 AGCTCCTCGTCAACTTCTCTAA 58.577 45.455 0.00 0.00 0.00 2.10
398 399 3.191791 AGCTCCTCGTCAACTTCTCTAAC 59.808 47.826 0.00 0.00 0.00 2.34
399 400 3.057456 GCTCCTCGTCAACTTCTCTAACA 60.057 47.826 0.00 0.00 0.00 2.41
400 401 4.558898 GCTCCTCGTCAACTTCTCTAACAA 60.559 45.833 0.00 0.00 0.00 2.83
401 402 5.524971 TCCTCGTCAACTTCTCTAACAAA 57.475 39.130 0.00 0.00 0.00 2.83
402 403 5.529791 TCCTCGTCAACTTCTCTAACAAAG 58.470 41.667 0.00 0.00 0.00 2.77
403 404 5.301045 TCCTCGTCAACTTCTCTAACAAAGA 59.699 40.000 0.00 0.00 0.00 2.52
418 419 9.273016 CTCTAACAAAGAGTACAAATGAAAGGA 57.727 33.333 0.00 0.00 45.85 3.36
419 420 9.052759 TCTAACAAAGAGTACAAATGAAAGGAC 57.947 33.333 0.00 0.00 0.00 3.85
420 421 6.635030 ACAAAGAGTACAAATGAAAGGACC 57.365 37.500 0.00 0.00 0.00 4.46
421 422 5.535030 ACAAAGAGTACAAATGAAAGGACCC 59.465 40.000 0.00 0.00 0.00 4.46
422 423 4.302559 AGAGTACAAATGAAAGGACCCC 57.697 45.455 0.00 0.00 0.00 4.95
423 424 3.010250 AGAGTACAAATGAAAGGACCCCC 59.990 47.826 0.00 0.00 0.00 5.40
437 438 3.922366 CCCCCAAGTCAAGACCCT 58.078 61.111 0.00 0.00 0.00 4.34
438 439 1.685820 CCCCCAAGTCAAGACCCTC 59.314 63.158 0.00 0.00 0.00 4.30
439 440 1.296715 CCCCAAGTCAAGACCCTCG 59.703 63.158 0.00 0.00 0.00 4.63
440 441 1.376037 CCCAAGTCAAGACCCTCGC 60.376 63.158 0.00 0.00 0.00 5.03
441 442 1.371183 CCAAGTCAAGACCCTCGCA 59.629 57.895 0.00 0.00 0.00 5.10
442 443 0.250295 CCAAGTCAAGACCCTCGCAA 60.250 55.000 0.00 0.00 0.00 4.85
443 444 1.151668 CAAGTCAAGACCCTCGCAAG 58.848 55.000 0.00 0.00 0.00 4.01
444 445 0.035458 AAGTCAAGACCCTCGCAAGG 59.965 55.000 0.00 0.00 42.95 3.61
452 453 2.581354 CCTCGCAAGGGTCCTCAG 59.419 66.667 0.00 0.00 39.21 3.35
453 454 2.125350 CTCGCAAGGGTCCTCAGC 60.125 66.667 4.84 4.84 38.47 4.26
454 455 3.672295 CTCGCAAGGGTCCTCAGCC 62.672 68.421 8.25 0.00 40.97 4.85
461 462 4.200283 GGTCCTCAGCCTCGCGAG 62.200 72.222 29.06 29.06 0.00 5.03
462 463 4.863925 GTCCTCAGCCTCGCGAGC 62.864 72.222 30.49 23.86 31.62 5.03
464 465 4.869440 CCTCAGCCTCGCGAGCAG 62.869 72.222 30.49 20.82 31.62 4.24
465 466 3.819920 CTCAGCCTCGCGAGCAGA 61.820 66.667 30.49 23.45 0.00 4.26
466 467 3.754740 CTCAGCCTCGCGAGCAGAG 62.755 68.421 30.49 27.51 37.50 3.35
470 471 3.184683 CCTCGCGAGCAGAGCAAC 61.185 66.667 30.49 0.00 34.56 4.17
471 472 3.540014 CTCGCGAGCAGAGCAACG 61.540 66.667 25.07 0.00 34.95 4.10
475 476 3.043713 CGAGCAGAGCAACGCCAA 61.044 61.111 0.00 0.00 0.00 4.52
476 477 2.866028 GAGCAGAGCAACGCCAAG 59.134 61.111 0.00 0.00 0.00 3.61
477 478 1.669115 GAGCAGAGCAACGCCAAGA 60.669 57.895 0.00 0.00 0.00 3.02
478 479 1.905922 GAGCAGAGCAACGCCAAGAC 61.906 60.000 0.00 0.00 0.00 3.01
479 480 2.970974 GCAGAGCAACGCCAAGACC 61.971 63.158 0.00 0.00 0.00 3.85
480 481 1.302033 CAGAGCAACGCCAAGACCT 60.302 57.895 0.00 0.00 0.00 3.85
481 482 1.004440 AGAGCAACGCCAAGACCTC 60.004 57.895 0.00 0.00 0.00 3.85
482 483 2.032681 AGCAACGCCAAGACCTCC 59.967 61.111 0.00 0.00 0.00 4.30
483 484 3.056328 GCAACGCCAAGACCTCCC 61.056 66.667 0.00 0.00 0.00 4.30
484 485 2.742372 CAACGCCAAGACCTCCCG 60.742 66.667 0.00 0.00 0.00 5.14
485 486 2.920912 AACGCCAAGACCTCCCGA 60.921 61.111 0.00 0.00 0.00 5.14
486 487 2.943978 AACGCCAAGACCTCCCGAG 61.944 63.158 0.00 0.00 0.00 4.63
500 501 3.393970 CGAGGGGCAGCTCTCCAA 61.394 66.667 5.08 0.00 0.00 3.53
501 502 2.588989 GAGGGGCAGCTCTCCAAG 59.411 66.667 5.08 0.00 0.00 3.61
520 521 3.124270 CAGTATGGCGCGCAACCA 61.124 61.111 34.42 22.28 42.61 3.67
521 522 3.124921 AGTATGGCGCGCAACCAC 61.125 61.111 34.42 22.70 40.82 4.16
522 523 4.174129 GTATGGCGCGCAACCACC 62.174 66.667 34.42 14.98 40.82 4.61
523 524 4.402528 TATGGCGCGCAACCACCT 62.403 61.111 34.42 8.88 40.82 4.00
528 529 4.025401 CGCGCAACCACCTCCAAC 62.025 66.667 8.75 0.00 0.00 3.77
529 530 4.025401 GCGCAACCACCTCCAACG 62.025 66.667 0.30 0.00 0.00 4.10
530 531 2.280524 CGCAACCACCTCCAACGA 60.281 61.111 0.00 0.00 0.00 3.85
531 532 2.604174 CGCAACCACCTCCAACGAC 61.604 63.158 0.00 0.00 0.00 4.34
532 533 1.525077 GCAACCACCTCCAACGACA 60.525 57.895 0.00 0.00 0.00 4.35
533 534 1.782028 GCAACCACCTCCAACGACAC 61.782 60.000 0.00 0.00 0.00 3.67
534 535 1.227438 AACCACCTCCAACGACACG 60.227 57.895 0.00 0.00 0.00 4.49
535 536 3.041940 CCACCTCCAACGACACGC 61.042 66.667 0.00 0.00 0.00 5.34
536 537 2.279851 CACCTCCAACGACACGCA 60.280 61.111 0.00 0.00 0.00 5.24
537 538 2.029073 ACCTCCAACGACACGCAG 59.971 61.111 0.00 0.00 0.00 5.18
538 539 3.414700 CCTCCAACGACACGCAGC 61.415 66.667 0.00 0.00 0.00 5.25
539 540 2.356313 CTCCAACGACACGCAGCT 60.356 61.111 0.00 0.00 0.00 4.24
540 541 1.956170 CTCCAACGACACGCAGCTT 60.956 57.895 0.00 0.00 0.00 3.74
541 542 1.498865 CTCCAACGACACGCAGCTTT 61.499 55.000 0.00 0.00 0.00 3.51
542 543 1.082756 CCAACGACACGCAGCTTTC 60.083 57.895 0.00 0.00 0.00 2.62
543 544 1.437089 CAACGACACGCAGCTTTCG 60.437 57.895 3.80 3.80 37.50 3.46
544 545 1.590525 AACGACACGCAGCTTTCGA 60.591 52.632 11.61 0.00 35.45 3.71
545 546 1.149361 AACGACACGCAGCTTTCGAA 61.149 50.000 11.61 0.00 35.45 3.71
546 547 1.149361 ACGACACGCAGCTTTCGAAA 61.149 50.000 10.71 10.71 35.45 3.46
547 548 0.718220 CGACACGCAGCTTTCGAAAC 60.718 55.000 6.47 4.52 33.20 2.78
548 549 0.384353 GACACGCAGCTTTCGAAACC 60.384 55.000 6.47 0.00 0.00 3.27
549 550 1.082104 CACGCAGCTTTCGAAACCC 60.082 57.895 6.47 1.02 0.00 4.11
550 551 1.525077 ACGCAGCTTTCGAAACCCA 60.525 52.632 6.47 0.00 0.00 4.51
551 552 0.889186 ACGCAGCTTTCGAAACCCAT 60.889 50.000 6.47 0.00 0.00 4.00
552 553 0.179189 CGCAGCTTTCGAAACCCATC 60.179 55.000 6.47 0.00 0.00 3.51
553 554 0.179189 GCAGCTTTCGAAACCCATCG 60.179 55.000 6.47 0.00 44.04 3.84
554 555 0.447801 CAGCTTTCGAAACCCATCGG 59.552 55.000 6.47 0.00 42.92 4.18
555 556 1.136774 GCTTTCGAAACCCATCGGC 59.863 57.895 6.47 3.31 42.92 5.54
556 557 1.423845 CTTTCGAAACCCATCGGCG 59.576 57.895 6.47 0.00 42.92 6.46
557 558 1.296056 CTTTCGAAACCCATCGGCGT 61.296 55.000 6.47 0.00 42.92 5.68
558 559 0.885596 TTTCGAAACCCATCGGCGTT 60.886 50.000 6.47 0.00 42.92 4.84
559 560 1.293267 TTCGAAACCCATCGGCGTTC 61.293 55.000 6.85 0.71 42.92 3.95
560 561 1.740296 CGAAACCCATCGGCGTTCT 60.740 57.895 6.85 0.00 39.12 3.01
561 562 1.693083 CGAAACCCATCGGCGTTCTC 61.693 60.000 6.85 0.00 39.12 2.87
562 563 0.391263 GAAACCCATCGGCGTTCTCT 60.391 55.000 6.85 0.00 0.00 3.10
563 564 0.036306 AAACCCATCGGCGTTCTCTT 59.964 50.000 6.85 0.00 0.00 2.85
564 565 0.391263 AACCCATCGGCGTTCTCTTC 60.391 55.000 6.85 0.00 0.00 2.87
565 566 1.218047 CCCATCGGCGTTCTCTTCA 59.782 57.895 6.85 0.00 0.00 3.02
574 575 2.418746 GGCGTTCTCTTCATCTTGCCTA 60.419 50.000 0.00 0.00 38.22 3.93
579 580 6.037172 GCGTTCTCTTCATCTTGCCTATTTTA 59.963 38.462 0.00 0.00 0.00 1.52
617 620 8.504005 AGAGGATTTGTTAAAACAGTTGATACG 58.496 33.333 0.00 0.00 40.50 3.06
618 621 8.161699 AGGATTTGTTAAAACAGTTGATACGT 57.838 30.769 0.00 0.00 40.50 3.57
619 622 8.626526 AGGATTTGTTAAAACAGTTGATACGTT 58.373 29.630 0.00 0.00 40.50 3.99
620 623 8.687301 GGATTTGTTAAAACAGTTGATACGTTG 58.313 33.333 0.00 0.00 40.50 4.10
625 628 9.653067 TGTTAAAACAGTTGATACGTTGTATTG 57.347 29.630 0.00 0.00 34.30 1.90
628 631 8.776680 AAAACAGTTGATACGTTGTATTGTTC 57.223 30.769 0.00 0.00 0.00 3.18
629 632 6.148270 ACAGTTGATACGTTGTATTGTTCG 57.852 37.500 0.00 0.00 0.00 3.95
630 633 5.921976 ACAGTTGATACGTTGTATTGTTCGA 59.078 36.000 0.00 0.00 0.00 3.71
661 664 9.631257 TCTTATGAAGCCTATTTCATGATTCAA 57.369 29.630 9.12 0.00 45.00 2.69
682 685 3.493350 AAGGCGATCTTATGCTGGTACAG 60.493 47.826 0.00 0.00 46.92 2.74
719 722 4.211374 CACGATCCCTGACGGAAAATAATC 59.789 45.833 0.00 0.00 46.47 1.75
750 789 6.317140 TGAATCTGAGAAAAATCGAAGGATGG 59.683 38.462 0.00 0.00 31.83 3.51
791 830 1.599797 GGCGGTTAGGCACTTGTGT 60.600 57.895 2.61 0.00 45.92 3.72
1311 1643 0.662077 TGACAACGTCCGTCGACATG 60.662 55.000 17.16 6.03 42.86 3.21
1314 1646 3.927163 AACGTCCGTCGACATGGCC 62.927 63.158 17.16 0.00 42.86 5.36
1369 1701 3.365265 GACCCAAAGCTGCCACCG 61.365 66.667 0.00 0.00 0.00 4.94
1564 1896 1.449070 CCGCAGAAGCATCAGAGCA 60.449 57.895 0.00 0.00 42.27 4.26
1772 2104 1.465689 CGGTTTGCGGCATAAGAACAG 60.466 52.381 14.95 8.73 0.00 3.16
1854 2186 2.360350 AACCACTCCGGCATGCAG 60.360 61.111 21.36 16.26 39.03 4.41
1858 2190 3.058160 ACTCCGGCATGCAGTTGC 61.058 61.111 21.36 3.60 42.01 4.17
1895 2227 1.004560 TGAGGAAGAAGCGCAGTGG 60.005 57.895 11.47 0.00 0.00 4.00
1961 2293 2.751259 ACGCGAACCTATTCAGACAGTA 59.249 45.455 15.93 0.00 34.14 2.74
1967 2299 6.637658 GCGAACCTATTCAGACAGTATTACTC 59.362 42.308 0.00 0.00 34.14 2.59
1972 2304 6.209788 CCTATTCAGACAGTATTACTCCCTCC 59.790 46.154 0.00 0.00 0.00 4.30
1973 2305 3.552875 TCAGACAGTATTACTCCCTCCG 58.447 50.000 0.00 0.00 0.00 4.63
1987 2319 8.945195 TTACTCCCTCCGATTCATATTACTTA 57.055 34.615 0.00 0.00 0.00 2.24
1990 2322 7.674348 ACTCCCTCCGATTCATATTACTTATCA 59.326 37.037 0.00 0.00 0.00 2.15
2044 2376 7.986085 AAAATATGAATCGGAGGGAGTATTG 57.014 36.000 0.00 0.00 0.00 1.90
2166 2499 7.095060 TGCTTTCTATTTTCAGTTGCTACTCAG 60.095 37.037 0.00 0.00 30.26 3.35
2216 3452 4.275689 TGATGAGTTGTTGGTTGATGACAC 59.724 41.667 0.00 0.00 0.00 3.67
2224 3460 4.688879 TGTTGGTTGATGACACGACTATTC 59.311 41.667 0.00 0.00 0.00 1.75
2258 3494 9.241317 CAATCTAAATGTACATTCCATTTGAGC 57.759 33.333 21.02 0.00 41.35 4.26
2305 3541 8.412456 TCAGCACTGAAAATTGAAACTTATTCA 58.588 29.630 0.00 0.00 36.53 2.57
2322 3558 9.651913 AACTTATTCAGTTCTCTTTTGCAAAAA 57.348 25.926 23.92 14.27 42.62 1.94
2458 3704 8.088365 ACCTTAGAATTGCTTATGTTTTTCACC 58.912 33.333 0.00 0.00 0.00 4.02
2505 3753 0.250467 AGCTTGATTCGCGCCCATAT 60.250 50.000 0.00 0.00 0.00 1.78
2513 3761 3.455990 TTCGCGCCCATATAGTGTTAA 57.544 42.857 0.00 0.00 0.00 2.01
2521 3769 7.480542 CGCGCCCATATAGTGTTAAATTTTATC 59.519 37.037 0.00 0.00 0.00 1.75
2587 3835 0.463833 CTACACGAGCCAAATCCCCC 60.464 60.000 0.00 0.00 0.00 5.40
2635 3883 9.734620 TTTGAATTGAACTGAGTAGACAAAATG 57.265 29.630 0.00 0.00 31.89 2.32
2636 3884 8.450578 TGAATTGAACTGAGTAGACAAAATGT 57.549 30.769 0.00 0.00 31.89 2.71
2637 3885 8.902806 TGAATTGAACTGAGTAGACAAAATGTT 58.097 29.630 0.00 0.00 31.89 2.71
2638 3886 9.387123 GAATTGAACTGAGTAGACAAAATGTTC 57.613 33.333 0.00 0.00 34.82 3.18
2639 3887 7.857734 TTGAACTGAGTAGACAAAATGTTCA 57.142 32.000 0.00 0.00 40.10 3.18
2640 3888 8.450578 TTGAACTGAGTAGACAAAATGTTCAT 57.549 30.769 0.00 0.00 40.99 2.57
2641 3889 7.864686 TGAACTGAGTAGACAAAATGTTCATG 58.135 34.615 0.00 0.00 37.97 3.07
2642 3890 6.808008 ACTGAGTAGACAAAATGTTCATGG 57.192 37.500 0.00 0.00 0.00 3.66
2643 3891 6.299141 ACTGAGTAGACAAAATGTTCATGGT 58.701 36.000 0.00 0.00 0.00 3.55
2654 3902 0.949105 GTTCATGGTTCGCCGACACT 60.949 55.000 0.00 0.00 41.18 3.55
2674 3922 3.152341 CTCCAAAGAACCAGTGAAGCAT 58.848 45.455 0.00 0.00 0.00 3.79
2675 3923 2.886523 TCCAAAGAACCAGTGAAGCATG 59.113 45.455 0.00 0.00 0.00 4.06
2676 3924 2.624838 CCAAAGAACCAGTGAAGCATGT 59.375 45.455 0.00 0.00 0.00 3.21
2677 3925 3.551454 CCAAAGAACCAGTGAAGCATGTG 60.551 47.826 0.00 0.00 0.00 3.21
2678 3926 1.901591 AGAACCAGTGAAGCATGTGG 58.098 50.000 0.00 0.00 36.05 4.17
2679 3927 1.143684 AGAACCAGTGAAGCATGTGGT 59.856 47.619 0.00 0.00 45.50 4.16
2680 3928 1.267806 GAACCAGTGAAGCATGTGGTG 59.732 52.381 4.34 0.00 42.67 4.17
2689 3937 3.434319 CATGTGGTGCACCGGAGC 61.434 66.667 30.07 17.78 39.43 4.70
2690 3938 3.640407 ATGTGGTGCACCGGAGCT 61.640 61.111 30.07 10.64 39.43 4.09
2691 3939 3.196207 ATGTGGTGCACCGGAGCTT 62.196 57.895 30.07 14.96 39.43 3.74
2692 3940 3.357079 GTGGTGCACCGGAGCTTG 61.357 66.667 30.07 5.34 39.43 4.01
2693 3941 3.872603 TGGTGCACCGGAGCTTGT 61.873 61.111 30.07 0.00 39.43 3.16
2694 3942 3.357079 GGTGCACCGGAGCTTGTG 61.357 66.667 22.49 4.12 34.99 3.33
2695 3943 3.357079 GTGCACCGGAGCTTGTGG 61.357 66.667 24.52 6.27 34.99 4.17
2696 3944 3.872603 TGCACCGGAGCTTGTGGT 61.873 61.111 24.52 6.83 36.10 4.16
2698 3946 3.357079 CACCGGAGCTTGTGGTGC 61.357 66.667 9.46 0.00 45.85 5.01
2699 3947 3.560251 ACCGGAGCTTGTGGTGCT 61.560 61.111 9.46 0.00 44.24 4.40
2700 3948 2.214216 ACCGGAGCTTGTGGTGCTA 61.214 57.895 9.46 0.00 41.30 3.49
2701 3949 1.741770 CCGGAGCTTGTGGTGCTAC 60.742 63.158 0.00 0.00 41.30 3.58
2702 3950 1.741770 CGGAGCTTGTGGTGCTACC 60.742 63.158 0.00 0.00 41.30 3.18
2713 3961 2.032528 TGCTACCAGTGCACCAGC 59.967 61.111 14.63 16.99 42.57 4.85
2724 3972 3.411808 GCACCAGCATCACATTGTG 57.588 52.632 10.64 10.64 41.58 3.33
2725 3973 0.734942 GCACCAGCATCACATTGTGC 60.735 55.000 12.04 0.70 41.75 4.57
2736 3984 6.890558 GCATCACATTGTGCTTTAAAAATGT 58.109 32.000 12.04 9.25 42.45 2.71
2737 3985 7.354257 GCATCACATTGTGCTTTAAAAATGTT 58.646 30.769 12.04 0.00 40.36 2.71
2738 3986 7.531534 GCATCACATTGTGCTTTAAAAATGTTC 59.468 33.333 12.04 1.99 40.36 3.18
2739 3987 8.549548 CATCACATTGTGCTTTAAAAATGTTCA 58.450 29.630 12.04 4.65 40.36 3.18
2740 3988 8.484641 TCACATTGTGCTTTAAAAATGTTCAA 57.515 26.923 12.04 3.16 40.36 2.69
2741 3989 8.939929 TCACATTGTGCTTTAAAAATGTTCAAA 58.060 25.926 12.04 0.00 40.36 2.69
2742 3990 9.552114 CACATTGTGCTTTAAAAATGTTCAAAA 57.448 25.926 11.52 0.00 40.36 2.44
2775 4023 9.226345 GAAAAATAATTAGCACACTCATACAGC 57.774 33.333 0.00 0.00 0.00 4.40
2776 4024 7.864108 AAATAATTAGCACACTCATACAGCA 57.136 32.000 0.00 0.00 0.00 4.41
2777 4025 8.455903 AAATAATTAGCACACTCATACAGCAT 57.544 30.769 0.00 0.00 0.00 3.79
2778 4026 5.998454 AATTAGCACACTCATACAGCATC 57.002 39.130 0.00 0.00 0.00 3.91
2779 4027 1.931906 AGCACACTCATACAGCATCG 58.068 50.000 0.00 0.00 0.00 3.84
2780 4028 1.478105 AGCACACTCATACAGCATCGA 59.522 47.619 0.00 0.00 0.00 3.59
2781 4029 1.590238 GCACACTCATACAGCATCGAC 59.410 52.381 0.00 0.00 0.00 4.20
2782 4030 1.848608 CACACTCATACAGCATCGACG 59.151 52.381 0.00 0.00 0.00 5.12
2783 4031 1.472878 ACACTCATACAGCATCGACGT 59.527 47.619 0.00 0.00 0.00 4.34
2784 4032 2.681344 ACACTCATACAGCATCGACGTA 59.319 45.455 0.00 0.00 0.00 3.57
2785 4033 3.242772 ACACTCATACAGCATCGACGTAG 60.243 47.826 0.00 0.00 0.00 3.51
2786 4034 2.290916 ACTCATACAGCATCGACGTAGG 59.709 50.000 0.00 0.00 0.00 3.18
2787 4035 2.290916 CTCATACAGCATCGACGTAGGT 59.709 50.000 0.00 0.00 0.00 3.08
2788 4036 2.686405 TCATACAGCATCGACGTAGGTT 59.314 45.455 0.00 0.00 0.00 3.50
2789 4037 2.554806 TACAGCATCGACGTAGGTTG 57.445 50.000 0.00 0.00 0.00 3.77
2790 4038 0.601558 ACAGCATCGACGTAGGTTGT 59.398 50.000 2.83 0.00 0.00 3.32
2791 4039 1.269166 CAGCATCGACGTAGGTTGTC 58.731 55.000 2.83 0.00 0.00 3.18
2792 4040 0.885879 AGCATCGACGTAGGTTGTCA 59.114 50.000 2.83 0.00 36.11 3.58
2793 4041 0.989890 GCATCGACGTAGGTTGTCAC 59.010 55.000 2.83 0.00 36.11 3.67
2794 4042 1.667756 GCATCGACGTAGGTTGTCACA 60.668 52.381 2.83 0.00 36.11 3.58
2795 4043 2.668250 CATCGACGTAGGTTGTCACAA 58.332 47.619 2.83 0.00 36.11 3.33
2796 4044 2.867287 TCGACGTAGGTTGTCACAAA 57.133 45.000 0.00 0.00 36.11 2.83
2797 4045 3.162202 TCGACGTAGGTTGTCACAAAA 57.838 42.857 0.00 0.00 36.11 2.44
2798 4046 3.719924 TCGACGTAGGTTGTCACAAAAT 58.280 40.909 0.00 0.00 36.11 1.82
2799 4047 4.121317 TCGACGTAGGTTGTCACAAAATT 58.879 39.130 0.00 0.00 36.11 1.82
2800 4048 4.571580 TCGACGTAGGTTGTCACAAAATTT 59.428 37.500 0.00 0.00 36.11 1.82
2801 4049 4.901881 CGACGTAGGTTGTCACAAAATTTC 59.098 41.667 0.00 0.00 36.11 2.17
2802 4050 5.502706 CGACGTAGGTTGTCACAAAATTTCA 60.503 40.000 0.00 0.00 36.11 2.69
2803 4051 6.197364 ACGTAGGTTGTCACAAAATTTCAA 57.803 33.333 0.00 0.00 0.00 2.69
2804 4052 6.262601 ACGTAGGTTGTCACAAAATTTCAAG 58.737 36.000 0.00 0.00 0.00 3.02
2805 4053 6.127842 ACGTAGGTTGTCACAAAATTTCAAGT 60.128 34.615 0.00 0.00 0.00 3.16
2806 4054 7.066043 ACGTAGGTTGTCACAAAATTTCAAGTA 59.934 33.333 0.00 0.00 0.00 2.24
2807 4055 8.073768 CGTAGGTTGTCACAAAATTTCAAGTAT 58.926 33.333 0.00 0.00 0.00 2.12
2837 4085 8.844441 TCGAAACATAACTCGAAAAACAAAAT 57.156 26.923 0.00 0.00 40.89 1.82
2838 4086 9.291664 TCGAAACATAACTCGAAAAACAAAATT 57.708 25.926 0.00 0.00 40.89 1.82
2839 4087 9.340327 CGAAACATAACTCGAAAAACAAAATTG 57.660 29.630 0.00 0.00 37.23 2.32
2842 4090 8.918961 ACATAACTCGAAAAACAAAATTGACA 57.081 26.923 0.00 0.00 0.00 3.58
2843 4091 9.528018 ACATAACTCGAAAAACAAAATTGACAT 57.472 25.926 0.00 0.00 0.00 3.06
2847 4095 8.472683 ACTCGAAAAACAAAATTGACATTTCA 57.527 26.923 0.00 0.00 30.80 2.69
2848 4096 8.930760 ACTCGAAAAACAAAATTGACATTTCAA 58.069 25.926 0.00 0.00 45.93 2.69
2849 4097 9.198065 CTCGAAAAACAAAATTGACATTTCAAC 57.802 29.630 0.00 0.00 44.66 3.18
2850 4098 8.712363 TCGAAAAACAAAATTGACATTTCAACA 58.288 25.926 0.00 0.00 44.66 3.33
2851 4099 9.488124 CGAAAAACAAAATTGACATTTCAACAT 57.512 25.926 0.00 0.00 44.66 2.71
2862 4110 9.773328 ATTGACATTTCAACATTGAATAGTACG 57.227 29.630 7.83 0.00 44.66 3.67
2863 4111 8.317891 TGACATTTCAACATTGAATAGTACGT 57.682 30.769 7.83 0.00 45.65 3.57
2864 4112 9.425577 TGACATTTCAACATTGAATAGTACGTA 57.574 29.630 7.83 0.00 45.65 3.57
2876 4124 8.706492 TTGAATAGTACGTAACATAACTTGGG 57.294 34.615 0.00 0.00 0.00 4.12
2877 4125 6.757947 TGAATAGTACGTAACATAACTTGGGC 59.242 38.462 0.00 0.00 0.00 5.36
2878 4126 3.514645 AGTACGTAACATAACTTGGGCG 58.485 45.455 0.00 0.00 0.00 6.13
2879 4127 2.747396 ACGTAACATAACTTGGGCGA 57.253 45.000 0.00 0.00 0.00 5.54
2880 4128 3.255969 ACGTAACATAACTTGGGCGAT 57.744 42.857 0.00 0.00 0.00 4.58
2881 4129 3.602483 ACGTAACATAACTTGGGCGATT 58.398 40.909 0.00 0.00 0.00 3.34
2882 4130 4.004982 ACGTAACATAACTTGGGCGATTT 58.995 39.130 0.00 0.00 0.00 2.17
2883 4131 4.142773 ACGTAACATAACTTGGGCGATTTG 60.143 41.667 0.00 0.00 0.00 2.32
2884 4132 3.866883 AACATAACTTGGGCGATTTGG 57.133 42.857 0.00 0.00 0.00 3.28
2885 4133 1.476488 ACATAACTTGGGCGATTTGGC 59.524 47.619 0.00 0.00 43.88 4.52
2895 4143 2.422276 GCGATTTGGCCCATTATCAC 57.578 50.000 0.00 0.00 0.00 3.06
2896 4144 1.680735 GCGATTTGGCCCATTATCACA 59.319 47.619 0.00 0.00 0.00 3.58
2897 4145 2.543653 GCGATTTGGCCCATTATCACAC 60.544 50.000 0.00 0.00 0.00 3.82
2898 4146 2.951642 CGATTTGGCCCATTATCACACT 59.048 45.455 0.00 0.00 0.00 3.55
2899 4147 3.243168 CGATTTGGCCCATTATCACACTG 60.243 47.826 0.00 0.00 0.00 3.66
2900 4148 3.448093 TTTGGCCCATTATCACACTGA 57.552 42.857 0.00 0.00 0.00 3.41
2901 4149 3.668141 TTGGCCCATTATCACACTGAT 57.332 42.857 0.00 0.00 40.72 2.90
2902 4150 2.934887 TGGCCCATTATCACACTGATG 58.065 47.619 0.00 0.00 37.70 3.07
2903 4151 2.241941 TGGCCCATTATCACACTGATGT 59.758 45.455 0.00 0.00 37.70 3.06
2904 4152 2.880890 GGCCCATTATCACACTGATGTC 59.119 50.000 0.00 0.00 37.70 3.06
2905 4153 3.544684 GCCCATTATCACACTGATGTCA 58.455 45.455 0.00 0.00 37.70 3.58
2906 4154 3.947196 GCCCATTATCACACTGATGTCAA 59.053 43.478 0.00 0.00 37.70 3.18
2907 4155 4.398988 GCCCATTATCACACTGATGTCAAA 59.601 41.667 0.00 0.00 37.70 2.69
2908 4156 5.068198 GCCCATTATCACACTGATGTCAAAT 59.932 40.000 0.00 0.00 37.70 2.32
2909 4157 6.406177 GCCCATTATCACACTGATGTCAAATT 60.406 38.462 0.00 0.00 37.70 1.82
2910 4158 7.549839 CCCATTATCACACTGATGTCAAATTT 58.450 34.615 0.00 0.00 37.70 1.82
2911 4159 8.685427 CCCATTATCACACTGATGTCAAATTTA 58.315 33.333 0.00 0.00 37.70 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.066430 GGCCTGTAGTTCGATGTTCCA 60.066 52.381 0.00 0.00 0.00 3.53
2 3 1.207329 AGGCCTGTAGTTCGATGTTCC 59.793 52.381 3.11 0.00 0.00 3.62
3 4 2.674796 AGGCCTGTAGTTCGATGTTC 57.325 50.000 3.11 0.00 0.00 3.18
4 5 2.354805 GGAAGGCCTGTAGTTCGATGTT 60.355 50.000 5.69 0.00 0.00 2.71
5 6 1.207329 GGAAGGCCTGTAGTTCGATGT 59.793 52.381 5.69 0.00 0.00 3.06
6 7 1.207089 TGGAAGGCCTGTAGTTCGATG 59.793 52.381 5.69 0.00 34.31 3.84
7 8 1.482593 CTGGAAGGCCTGTAGTTCGAT 59.517 52.381 5.69 0.00 34.31 3.59
8 9 0.895530 CTGGAAGGCCTGTAGTTCGA 59.104 55.000 5.69 0.00 34.31 3.71
9 10 0.741221 GCTGGAAGGCCTGTAGTTCG 60.741 60.000 5.69 0.00 35.68 3.95
10 11 0.615850 AGCTGGAAGGCCTGTAGTTC 59.384 55.000 5.69 0.00 35.68 3.01
11 12 0.326264 CAGCTGGAAGGCCTGTAGTT 59.674 55.000 5.69 0.00 35.68 2.24
12 13 1.557269 CCAGCTGGAAGGCCTGTAGT 61.557 60.000 29.88 0.00 37.39 2.73
13 14 1.222936 CCAGCTGGAAGGCCTGTAG 59.777 63.158 29.88 6.40 37.39 2.74
14 15 1.229496 TCCAGCTGGAAGGCCTGTA 60.229 57.895 33.41 6.97 42.18 2.74
15 16 2.530151 TCCAGCTGGAAGGCCTGT 60.530 61.111 33.41 0.00 42.18 4.00
16 17 2.134630 AACTCCAGCTGGAAGGCCTG 62.135 60.000 34.30 23.70 44.91 4.85
17 18 1.846712 GAACTCCAGCTGGAAGGCCT 61.847 60.000 34.30 17.50 44.91 5.19
18 19 1.377856 GAACTCCAGCTGGAAGGCC 60.378 63.158 34.30 19.86 44.91 5.19
19 20 0.250901 TTGAACTCCAGCTGGAAGGC 60.251 55.000 34.30 24.68 44.91 4.35
20 21 1.349026 TCTTGAACTCCAGCTGGAAGG 59.651 52.381 34.30 25.82 44.91 3.46
21 22 2.224378 TGTCTTGAACTCCAGCTGGAAG 60.224 50.000 34.30 27.07 44.91 3.46
22 23 1.768275 TGTCTTGAACTCCAGCTGGAA 59.232 47.619 34.30 18.57 44.91 3.53
23 24 1.423584 TGTCTTGAACTCCAGCTGGA 58.576 50.000 33.04 33.04 43.08 3.86
24 25 2.149578 CTTGTCTTGAACTCCAGCTGG 58.850 52.381 27.87 27.87 0.00 4.85
25 26 1.534595 GCTTGTCTTGAACTCCAGCTG 59.465 52.381 6.78 6.78 0.00 4.24
26 27 1.141657 TGCTTGTCTTGAACTCCAGCT 59.858 47.619 0.00 0.00 31.31 4.24
27 28 1.534595 CTGCTTGTCTTGAACTCCAGC 59.465 52.381 0.00 0.00 0.00 4.85
28 29 2.149578 CCTGCTTGTCTTGAACTCCAG 58.850 52.381 0.00 0.00 0.00 3.86
29 30 1.202806 CCCTGCTTGTCTTGAACTCCA 60.203 52.381 0.00 0.00 0.00 3.86
30 31 1.202818 ACCCTGCTTGTCTTGAACTCC 60.203 52.381 0.00 0.00 0.00 3.85
31 32 2.147150 GACCCTGCTTGTCTTGAACTC 58.853 52.381 0.00 0.00 0.00 3.01
32 33 1.490490 TGACCCTGCTTGTCTTGAACT 59.510 47.619 0.00 0.00 33.83 3.01
33 34 1.967319 TGACCCTGCTTGTCTTGAAC 58.033 50.000 0.00 0.00 33.83 3.18
34 35 2.106338 TGATGACCCTGCTTGTCTTGAA 59.894 45.455 0.00 0.00 33.83 2.69
35 36 1.699083 TGATGACCCTGCTTGTCTTGA 59.301 47.619 0.00 0.00 33.83 3.02
36 37 2.189594 TGATGACCCTGCTTGTCTTG 57.810 50.000 0.00 0.00 33.83 3.02
37 38 2.553904 CCTTGATGACCCTGCTTGTCTT 60.554 50.000 0.00 0.00 33.83 3.01
38 39 1.004044 CCTTGATGACCCTGCTTGTCT 59.996 52.381 0.00 0.00 33.83 3.41
39 40 1.457346 CCTTGATGACCCTGCTTGTC 58.543 55.000 0.00 0.00 0.00 3.18
40 41 0.038744 CCCTTGATGACCCTGCTTGT 59.961 55.000 0.00 0.00 0.00 3.16
41 42 0.038744 ACCCTTGATGACCCTGCTTG 59.961 55.000 0.00 0.00 0.00 4.01
42 43 0.038744 CACCCTTGATGACCCTGCTT 59.961 55.000 0.00 0.00 0.00 3.91
43 44 1.136329 ACACCCTTGATGACCCTGCT 61.136 55.000 0.00 0.00 0.00 4.24
44 45 0.962356 CACACCCTTGATGACCCTGC 60.962 60.000 0.00 0.00 0.00 4.85
45 46 0.322816 CCACACCCTTGATGACCCTG 60.323 60.000 0.00 0.00 0.00 4.45
46 47 2.078452 CCACACCCTTGATGACCCT 58.922 57.895 0.00 0.00 0.00 4.34
47 48 1.678970 GCCACACCCTTGATGACCC 60.679 63.158 0.00 0.00 0.00 4.46
48 49 1.678970 GGCCACACCCTTGATGACC 60.679 63.158 0.00 0.00 0.00 4.02
49 50 4.002797 GGCCACACCCTTGATGAC 57.997 61.111 0.00 0.00 0.00 3.06
58 59 3.590466 AATCAGCCAGGGCCACACC 62.590 63.158 6.18 0.00 43.17 4.16
59 60 1.187567 AAAATCAGCCAGGGCCACAC 61.188 55.000 6.18 0.00 43.17 3.82
60 61 1.155859 AAAATCAGCCAGGGCCACA 59.844 52.632 6.18 0.00 43.17 4.17
61 62 1.187567 ACAAAATCAGCCAGGGCCAC 61.188 55.000 6.18 0.00 43.17 5.01
62 63 1.155859 ACAAAATCAGCCAGGGCCA 59.844 52.632 6.18 0.00 43.17 5.36
63 64 0.899717 TCACAAAATCAGCCAGGGCC 60.900 55.000 6.70 0.00 43.17 5.80
64 65 0.244721 GTCACAAAATCAGCCAGGGC 59.755 55.000 0.97 0.97 42.33 5.19
65 66 0.523072 CGTCACAAAATCAGCCAGGG 59.477 55.000 0.00 0.00 0.00 4.45
66 67 0.523072 CCGTCACAAAATCAGCCAGG 59.477 55.000 0.00 0.00 0.00 4.45
67 68 1.466167 CTCCGTCACAAAATCAGCCAG 59.534 52.381 0.00 0.00 0.00 4.85
68 69 1.202758 ACTCCGTCACAAAATCAGCCA 60.203 47.619 0.00 0.00 0.00 4.75
69 70 1.197721 CACTCCGTCACAAAATCAGCC 59.802 52.381 0.00 0.00 0.00 4.85
70 71 1.197721 CCACTCCGTCACAAAATCAGC 59.802 52.381 0.00 0.00 0.00 4.26
71 72 2.766313 TCCACTCCGTCACAAAATCAG 58.234 47.619 0.00 0.00 0.00 2.90
72 73 2.920724 TCCACTCCGTCACAAAATCA 57.079 45.000 0.00 0.00 0.00 2.57
73 74 2.420022 CCATCCACTCCGTCACAAAATC 59.580 50.000 0.00 0.00 0.00 2.17
74 75 2.039746 TCCATCCACTCCGTCACAAAAT 59.960 45.455 0.00 0.00 0.00 1.82
75 76 1.418264 TCCATCCACTCCGTCACAAAA 59.582 47.619 0.00 0.00 0.00 2.44
76 77 1.052617 TCCATCCACTCCGTCACAAA 58.947 50.000 0.00 0.00 0.00 2.83
77 78 1.066215 CATCCATCCACTCCGTCACAA 60.066 52.381 0.00 0.00 0.00 3.33
78 79 0.536724 CATCCATCCACTCCGTCACA 59.463 55.000 0.00 0.00 0.00 3.58
79 80 0.811616 GCATCCATCCACTCCGTCAC 60.812 60.000 0.00 0.00 0.00 3.67
80 81 0.977627 AGCATCCATCCACTCCGTCA 60.978 55.000 0.00 0.00 0.00 4.35
81 82 0.249657 GAGCATCCATCCACTCCGTC 60.250 60.000 0.00 0.00 0.00 4.79
82 83 1.826024 GAGCATCCATCCACTCCGT 59.174 57.895 0.00 0.00 0.00 4.69
83 84 4.766970 GAGCATCCATCCACTCCG 57.233 61.111 0.00 0.00 0.00 4.63
99 100 3.452621 ATCCAGCCTCCGATCGGGA 62.453 63.158 32.79 21.00 44.68 5.14
100 101 2.919856 ATCCAGCCTCCGATCGGG 60.920 66.667 32.79 22.45 35.59 5.14
101 102 2.152297 CTCATCCAGCCTCCGATCGG 62.152 65.000 28.62 28.62 0.00 4.18
102 103 1.288439 CTCATCCAGCCTCCGATCG 59.712 63.158 8.51 8.51 0.00 3.69
103 104 1.670590 CCTCATCCAGCCTCCGATC 59.329 63.158 0.00 0.00 0.00 3.69
104 105 1.840650 CCCTCATCCAGCCTCCGAT 60.841 63.158 0.00 0.00 0.00 4.18
105 106 2.444706 CCCTCATCCAGCCTCCGA 60.445 66.667 0.00 0.00 0.00 4.55
106 107 4.247380 GCCCTCATCCAGCCTCCG 62.247 72.222 0.00 0.00 0.00 4.63
107 108 3.883549 GGCCCTCATCCAGCCTCC 61.884 72.222 0.00 0.00 43.62 4.30
141 142 4.778415 CCGTCAGGCACCTCGTCG 62.778 72.222 0.00 0.00 0.00 5.12
151 152 2.124983 CATGACCCAGCCGTCAGG 60.125 66.667 5.29 1.57 45.55 3.86
152 153 2.821366 GCATGACCCAGCCGTCAG 60.821 66.667 0.00 0.34 45.55 3.51
153 154 3.635191 TGCATGACCCAGCCGTCA 61.635 61.111 0.00 1.78 46.36 4.35
154 155 3.127533 GTGCATGACCCAGCCGTC 61.128 66.667 0.00 0.00 0.00 4.79
155 156 3.196207 AAGTGCATGACCCAGCCGT 62.196 57.895 0.00 0.00 0.00 5.68
156 157 2.360350 AAGTGCATGACCCAGCCG 60.360 61.111 0.00 0.00 0.00 5.52
157 158 2.401766 CGAAGTGCATGACCCAGCC 61.402 63.158 0.00 0.00 0.00 4.85
158 159 1.375908 TCGAAGTGCATGACCCAGC 60.376 57.895 0.00 0.00 0.00 4.85
159 160 1.354337 CGTCGAAGTGCATGACCCAG 61.354 60.000 0.00 0.00 0.00 4.45
160 161 1.374125 CGTCGAAGTGCATGACCCA 60.374 57.895 0.00 0.00 0.00 4.51
161 162 2.100631 CCGTCGAAGTGCATGACCC 61.101 63.158 0.00 0.00 0.00 4.46
162 163 2.740714 GCCGTCGAAGTGCATGACC 61.741 63.158 0.00 0.00 0.00 4.02
163 164 2.778679 GCCGTCGAAGTGCATGAC 59.221 61.111 0.00 0.00 0.00 3.06
164 165 2.809174 CGCCGTCGAAGTGCATGA 60.809 61.111 0.00 0.00 38.10 3.07
165 166 4.505217 GCGCCGTCGAAGTGCATG 62.505 66.667 15.29 0.00 40.47 4.06
169 170 3.479269 GAAGGCGCCGTCGAAGTG 61.479 66.667 26.37 0.00 38.10 3.16
199 200 4.530857 CACGACTCCATCCCCCGC 62.531 72.222 0.00 0.00 0.00 6.13
200 201 4.530857 GCACGACTCCATCCCCCG 62.531 72.222 0.00 0.00 0.00 5.73
201 202 3.083997 AGCACGACTCCATCCCCC 61.084 66.667 0.00 0.00 0.00 5.40
202 203 1.690219 ATGAGCACGACTCCATCCCC 61.690 60.000 7.56 0.00 45.61 4.81
203 204 0.249657 GATGAGCACGACTCCATCCC 60.250 60.000 7.56 0.00 45.61 3.85
204 205 0.749649 AGATGAGCACGACTCCATCC 59.250 55.000 7.56 0.00 45.61 3.51
205 206 1.406898 TGAGATGAGCACGACTCCATC 59.593 52.381 7.56 0.00 45.61 3.51
206 207 1.135915 GTGAGATGAGCACGACTCCAT 59.864 52.381 7.56 0.00 45.61 3.41
207 208 0.528017 GTGAGATGAGCACGACTCCA 59.472 55.000 7.56 0.00 45.61 3.86
208 209 0.179124 GGTGAGATGAGCACGACTCC 60.179 60.000 7.56 0.00 45.61 3.85
209 210 0.528017 TGGTGAGATGAGCACGACTC 59.472 55.000 0.00 0.00 46.45 3.36
210 211 0.529833 CTGGTGAGATGAGCACGACT 59.470 55.000 0.00 0.00 37.13 4.18
211 212 1.080995 GCTGGTGAGATGAGCACGAC 61.081 60.000 0.00 0.00 37.13 4.34
212 213 1.216444 GCTGGTGAGATGAGCACGA 59.784 57.895 0.00 0.00 37.13 4.35
213 214 1.812922 GGCTGGTGAGATGAGCACG 60.813 63.158 0.00 0.00 37.13 5.34
214 215 0.321919 TTGGCTGGTGAGATGAGCAC 60.322 55.000 0.00 0.00 34.20 4.40
215 216 0.035725 CTTGGCTGGTGAGATGAGCA 60.036 55.000 0.00 0.00 34.20 4.26
216 217 0.747283 CCTTGGCTGGTGAGATGAGC 60.747 60.000 0.00 0.00 0.00 4.26
217 218 0.907486 TCCTTGGCTGGTGAGATGAG 59.093 55.000 0.00 0.00 0.00 2.90
218 219 0.615331 GTCCTTGGCTGGTGAGATGA 59.385 55.000 0.00 0.00 0.00 2.92
219 220 0.325933 TGTCCTTGGCTGGTGAGATG 59.674 55.000 0.00 0.00 0.00 2.90
220 221 1.004044 CTTGTCCTTGGCTGGTGAGAT 59.996 52.381 0.00 0.00 0.00 2.75
221 222 0.397941 CTTGTCCTTGGCTGGTGAGA 59.602 55.000 0.00 0.00 0.00 3.27
222 223 1.239968 GCTTGTCCTTGGCTGGTGAG 61.240 60.000 0.00 0.00 0.00 3.51
223 224 1.228245 GCTTGTCCTTGGCTGGTGA 60.228 57.895 0.00 0.00 0.00 4.02
224 225 1.228367 AGCTTGTCCTTGGCTGGTG 60.228 57.895 0.00 0.00 34.82 4.17
225 226 1.073897 GAGCTTGTCCTTGGCTGGT 59.926 57.895 0.00 0.00 36.37 4.00
226 227 0.615331 TAGAGCTTGTCCTTGGCTGG 59.385 55.000 0.00 0.00 36.37 4.85
227 228 1.277557 AGTAGAGCTTGTCCTTGGCTG 59.722 52.381 0.00 0.00 36.37 4.85
228 229 1.650528 AGTAGAGCTTGTCCTTGGCT 58.349 50.000 0.00 0.00 39.16 4.75
229 230 3.118592 ACATAGTAGAGCTTGTCCTTGGC 60.119 47.826 0.00 0.00 0.00 4.52
230 231 4.744795 ACATAGTAGAGCTTGTCCTTGG 57.255 45.455 0.00 0.00 0.00 3.61
231 232 5.349817 CACAACATAGTAGAGCTTGTCCTTG 59.650 44.000 0.00 0.00 0.00 3.61
232 233 5.482908 CACAACATAGTAGAGCTTGTCCTT 58.517 41.667 0.00 0.00 0.00 3.36
233 234 4.621747 GCACAACATAGTAGAGCTTGTCCT 60.622 45.833 0.00 0.00 0.00 3.85
234 235 3.619038 GCACAACATAGTAGAGCTTGTCC 59.381 47.826 0.00 0.00 0.00 4.02
235 236 4.245660 TGCACAACATAGTAGAGCTTGTC 58.754 43.478 0.00 0.00 0.00 3.18
236 237 4.248859 CTGCACAACATAGTAGAGCTTGT 58.751 43.478 0.00 0.00 0.00 3.16
237 238 3.063180 GCTGCACAACATAGTAGAGCTTG 59.937 47.826 0.00 0.00 0.00 4.01
238 239 3.055530 AGCTGCACAACATAGTAGAGCTT 60.056 43.478 1.02 0.00 33.72 3.74
239 240 2.499289 AGCTGCACAACATAGTAGAGCT 59.501 45.455 1.02 0.00 33.04 4.09
240 241 2.898705 AGCTGCACAACATAGTAGAGC 58.101 47.619 1.02 0.00 0.00 4.09
241 242 5.213913 CAAAGCTGCACAACATAGTAGAG 57.786 43.478 1.02 0.00 0.00 2.43
264 265 3.037549 AGGAGACCTTCTATGCTGGAAG 58.962 50.000 0.00 0.00 39.65 3.46
265 266 3.121929 AGGAGACCTTCTATGCTGGAA 57.878 47.619 0.00 0.00 0.00 3.53
266 267 2.856760 AGGAGACCTTCTATGCTGGA 57.143 50.000 0.00 0.00 0.00 3.86
267 268 3.300388 TGTAGGAGACCTTCTATGCTGG 58.700 50.000 0.00 0.00 34.61 4.85
268 269 4.160439 TGTTGTAGGAGACCTTCTATGCTG 59.840 45.833 0.00 0.00 34.61 4.41
269 270 4.353777 TGTTGTAGGAGACCTTCTATGCT 58.646 43.478 0.00 0.00 34.61 3.79
270 271 4.737855 TGTTGTAGGAGACCTTCTATGC 57.262 45.455 0.00 0.00 34.61 3.14
271 272 6.276847 GTGATGTTGTAGGAGACCTTCTATG 58.723 44.000 0.00 0.00 34.61 2.23
272 273 5.067936 CGTGATGTTGTAGGAGACCTTCTAT 59.932 44.000 0.00 0.00 34.61 1.98
273 274 4.398358 CGTGATGTTGTAGGAGACCTTCTA 59.602 45.833 0.00 0.00 34.61 2.10
274 275 3.193691 CGTGATGTTGTAGGAGACCTTCT 59.806 47.826 0.00 0.00 34.61 2.85
275 276 3.512680 CGTGATGTTGTAGGAGACCTTC 58.487 50.000 0.00 0.00 34.61 3.46
276 277 2.233922 CCGTGATGTTGTAGGAGACCTT 59.766 50.000 0.00 0.00 34.61 3.50
277 278 1.825474 CCGTGATGTTGTAGGAGACCT 59.175 52.381 0.00 0.00 37.71 3.85
278 279 1.822990 TCCGTGATGTTGTAGGAGACC 59.177 52.381 0.00 0.00 0.00 3.85
282 283 4.274978 TCATACTCCGTGATGTTGTAGGA 58.725 43.478 0.00 0.00 0.00 2.94
283 284 4.499865 CCTCATACTCCGTGATGTTGTAGG 60.500 50.000 0.00 0.00 0.00 3.18
284 285 4.499865 CCCTCATACTCCGTGATGTTGTAG 60.500 50.000 0.00 0.00 0.00 2.74
285 286 3.383505 CCCTCATACTCCGTGATGTTGTA 59.616 47.826 0.00 0.00 0.00 2.41
286 287 2.168521 CCCTCATACTCCGTGATGTTGT 59.831 50.000 0.00 0.00 0.00 3.32
287 288 2.826428 CCCTCATACTCCGTGATGTTG 58.174 52.381 0.00 0.00 0.00 3.33
288 289 1.139058 GCCCTCATACTCCGTGATGTT 59.861 52.381 0.00 0.00 0.00 2.71
289 290 0.753262 GCCCTCATACTCCGTGATGT 59.247 55.000 0.00 0.00 0.00 3.06
290 291 1.043816 AGCCCTCATACTCCGTGATG 58.956 55.000 0.00 0.00 0.00 3.07
291 292 1.414181 CAAGCCCTCATACTCCGTGAT 59.586 52.381 0.00 0.00 0.00 3.06
292 293 0.824109 CAAGCCCTCATACTCCGTGA 59.176 55.000 0.00 0.00 0.00 4.35
293 294 0.824109 TCAAGCCCTCATACTCCGTG 59.176 55.000 0.00 0.00 0.00 4.94
294 295 1.794714 ATCAAGCCCTCATACTCCGT 58.205 50.000 0.00 0.00 0.00 4.69
295 296 2.487934 CAATCAAGCCCTCATACTCCG 58.512 52.381 0.00 0.00 0.00 4.63
296 297 2.158696 AGCAATCAAGCCCTCATACTCC 60.159 50.000 0.00 0.00 34.23 3.85
297 298 2.877168 CAGCAATCAAGCCCTCATACTC 59.123 50.000 0.00 0.00 34.23 2.59
298 299 2.422519 CCAGCAATCAAGCCCTCATACT 60.423 50.000 0.00 0.00 34.23 2.12
299 300 1.952296 CCAGCAATCAAGCCCTCATAC 59.048 52.381 0.00 0.00 34.23 2.39
300 301 1.751733 GCCAGCAATCAAGCCCTCATA 60.752 52.381 0.00 0.00 34.23 2.15
301 302 1.041447 GCCAGCAATCAAGCCCTCAT 61.041 55.000 0.00 0.00 34.23 2.90
302 303 1.679977 GCCAGCAATCAAGCCCTCA 60.680 57.895 0.00 0.00 34.23 3.86
303 304 2.421399 GGCCAGCAATCAAGCCCTC 61.421 63.158 0.00 0.00 39.60 4.30
304 305 2.363406 GGCCAGCAATCAAGCCCT 60.363 61.111 0.00 0.00 39.60 5.19
306 307 1.664321 CTGAGGCCAGCAATCAAGCC 61.664 60.000 5.01 0.00 46.13 4.35
307 308 1.664321 CCTGAGGCCAGCAATCAAGC 61.664 60.000 5.01 0.00 39.07 4.01
308 309 1.035932 CCCTGAGGCCAGCAATCAAG 61.036 60.000 5.01 0.00 39.07 3.02
309 310 1.000521 CCCTGAGGCCAGCAATCAA 60.001 57.895 5.01 0.00 39.07 2.57
310 311 2.679092 CCCTGAGGCCAGCAATCA 59.321 61.111 5.01 0.00 39.07 2.57
338 339 2.132089 TAAGGCGTTTGACCCCCAGG 62.132 60.000 0.00 0.00 40.04 4.45
339 340 0.958876 GTAAGGCGTTTGACCCCCAG 60.959 60.000 0.00 0.00 0.00 4.45
340 341 1.073548 GTAAGGCGTTTGACCCCCA 59.926 57.895 0.00 0.00 0.00 4.96
341 342 1.676635 GGTAAGGCGTTTGACCCCC 60.677 63.158 0.00 0.00 0.00 5.40
342 343 0.323087 ATGGTAAGGCGTTTGACCCC 60.323 55.000 8.28 0.00 0.00 4.95
343 344 1.092348 GATGGTAAGGCGTTTGACCC 58.908 55.000 8.28 0.67 0.00 4.46
344 345 1.816074 TGATGGTAAGGCGTTTGACC 58.184 50.000 0.00 0.11 0.00 4.02
345 346 2.161609 CCTTGATGGTAAGGCGTTTGAC 59.838 50.000 0.00 0.00 40.67 3.18
346 347 2.432444 CCTTGATGGTAAGGCGTTTGA 58.568 47.619 0.00 0.00 40.67 2.69
347 348 1.472480 CCCTTGATGGTAAGGCGTTTG 59.528 52.381 0.00 0.00 44.75 2.93
348 349 1.074889 ACCCTTGATGGTAAGGCGTTT 59.925 47.619 0.00 0.00 44.75 3.60
349 350 0.696501 ACCCTTGATGGTAAGGCGTT 59.303 50.000 0.00 0.00 44.75 4.84
350 351 0.035439 CACCCTTGATGGTAAGGCGT 60.035 55.000 0.00 0.00 44.75 5.68
351 352 0.251916 TCACCCTTGATGGTAAGGCG 59.748 55.000 0.00 0.00 44.75 5.52
352 353 1.282157 AGTCACCCTTGATGGTAAGGC 59.718 52.381 0.00 0.00 44.75 4.35
353 354 2.840651 AGAGTCACCCTTGATGGTAAGG 59.159 50.000 0.00 0.00 45.51 2.69
354 355 4.559862 AAGAGTCACCCTTGATGGTAAG 57.440 45.455 0.00 0.00 36.67 2.34
355 356 4.081087 GCTAAGAGTCACCCTTGATGGTAA 60.081 45.833 0.00 0.00 36.67 2.85
356 357 3.451178 GCTAAGAGTCACCCTTGATGGTA 59.549 47.826 0.00 0.00 36.67 3.25
357 358 2.237392 GCTAAGAGTCACCCTTGATGGT 59.763 50.000 0.00 0.00 39.96 3.55
358 359 2.503356 AGCTAAGAGTCACCCTTGATGG 59.497 50.000 0.00 0.00 33.11 3.51
359 360 3.431486 GGAGCTAAGAGTCACCCTTGATG 60.431 52.174 0.00 0.00 33.11 3.07
360 361 2.769095 GGAGCTAAGAGTCACCCTTGAT 59.231 50.000 0.00 0.00 33.11 2.57
361 362 2.180276 GGAGCTAAGAGTCACCCTTGA 58.820 52.381 0.00 0.00 0.00 3.02
362 363 2.167487 GAGGAGCTAAGAGTCACCCTTG 59.833 54.545 0.00 0.00 0.00 3.61
363 364 2.462723 GAGGAGCTAAGAGTCACCCTT 58.537 52.381 0.00 0.00 0.00 3.95
364 365 1.683629 CGAGGAGCTAAGAGTCACCCT 60.684 57.143 0.00 0.00 0.00 4.34
365 366 0.741915 CGAGGAGCTAAGAGTCACCC 59.258 60.000 0.00 0.00 0.00 4.61
366 367 1.402613 GACGAGGAGCTAAGAGTCACC 59.597 57.143 0.00 0.00 0.00 4.02
367 368 2.085320 TGACGAGGAGCTAAGAGTCAC 58.915 52.381 9.57 0.00 34.24 3.67
368 369 2.488545 GTTGACGAGGAGCTAAGAGTCA 59.511 50.000 9.57 9.57 36.91 3.41
369 370 2.750712 AGTTGACGAGGAGCTAAGAGTC 59.249 50.000 0.00 0.00 0.00 3.36
370 371 2.797786 AGTTGACGAGGAGCTAAGAGT 58.202 47.619 0.00 0.00 0.00 3.24
371 372 3.442273 AGAAGTTGACGAGGAGCTAAGAG 59.558 47.826 0.00 0.00 0.00 2.85
372 373 3.422796 AGAAGTTGACGAGGAGCTAAGA 58.577 45.455 0.00 0.00 0.00 2.10
373 374 3.442273 AGAGAAGTTGACGAGGAGCTAAG 59.558 47.826 0.00 0.00 0.00 2.18
374 375 3.422796 AGAGAAGTTGACGAGGAGCTAA 58.577 45.455 0.00 0.00 0.00 3.09
375 376 3.074675 AGAGAAGTTGACGAGGAGCTA 57.925 47.619 0.00 0.00 0.00 3.32
376 377 1.917872 AGAGAAGTTGACGAGGAGCT 58.082 50.000 0.00 0.00 0.00 4.09
377 378 3.057456 TGTTAGAGAAGTTGACGAGGAGC 60.057 47.826 0.00 0.00 0.00 4.70
378 379 4.768130 TGTTAGAGAAGTTGACGAGGAG 57.232 45.455 0.00 0.00 0.00 3.69
379 380 5.301045 TCTTTGTTAGAGAAGTTGACGAGGA 59.699 40.000 0.00 0.00 0.00 3.71
380 381 5.529791 TCTTTGTTAGAGAAGTTGACGAGG 58.470 41.667 0.00 0.00 0.00 4.63
393 394 9.052759 GTCCTTTCATTTGTACTCTTTGTTAGA 57.947 33.333 0.00 0.00 0.00 2.10
394 395 8.290325 GGTCCTTTCATTTGTACTCTTTGTTAG 58.710 37.037 0.00 0.00 0.00 2.34
395 396 7.229907 GGGTCCTTTCATTTGTACTCTTTGTTA 59.770 37.037 0.00 0.00 0.00 2.41
396 397 6.040504 GGGTCCTTTCATTTGTACTCTTTGTT 59.959 38.462 0.00 0.00 0.00 2.83
397 398 5.535030 GGGTCCTTTCATTTGTACTCTTTGT 59.465 40.000 0.00 0.00 0.00 2.83
398 399 5.048013 GGGGTCCTTTCATTTGTACTCTTTG 60.048 44.000 0.00 0.00 0.00 2.77
399 400 5.077564 GGGGTCCTTTCATTTGTACTCTTT 58.922 41.667 0.00 0.00 0.00 2.52
400 401 4.508584 GGGGGTCCTTTCATTTGTACTCTT 60.509 45.833 0.00 0.00 0.00 2.85
401 402 3.010250 GGGGGTCCTTTCATTTGTACTCT 59.990 47.826 0.00 0.00 0.00 3.24
402 403 3.353557 GGGGGTCCTTTCATTTGTACTC 58.646 50.000 0.00 0.00 0.00 2.59
403 404 3.451402 GGGGGTCCTTTCATTTGTACT 57.549 47.619 0.00 0.00 0.00 2.73
420 421 1.685820 GAGGGTCTTGACTTGGGGG 59.314 63.158 0.61 0.00 0.00 5.40
421 422 1.296715 CGAGGGTCTTGACTTGGGG 59.703 63.158 0.61 0.00 0.00 4.96
422 423 1.376037 GCGAGGGTCTTGACTTGGG 60.376 63.158 0.61 0.00 0.00 4.12
423 424 0.250295 TTGCGAGGGTCTTGACTTGG 60.250 55.000 0.61 0.00 0.00 3.61
424 425 1.151668 CTTGCGAGGGTCTTGACTTG 58.848 55.000 0.00 0.00 0.00 3.16
425 426 0.035458 CCTTGCGAGGGTCTTGACTT 59.965 55.000 12.81 0.00 39.55 3.01
426 427 1.674057 CCTTGCGAGGGTCTTGACT 59.326 57.895 12.81 0.00 39.55 3.41
427 428 4.285851 CCTTGCGAGGGTCTTGAC 57.714 61.111 12.81 0.00 39.55 3.18
435 436 2.581354 CTGAGGACCCTTGCGAGG 59.419 66.667 13.75 13.75 43.15 4.63
436 437 2.125350 GCTGAGGACCCTTGCGAG 60.125 66.667 0.00 0.00 0.00 5.03
437 438 3.706373 GGCTGAGGACCCTTGCGA 61.706 66.667 0.00 0.00 0.00 5.10
438 439 3.672295 GAGGCTGAGGACCCTTGCG 62.672 68.421 0.00 0.00 0.00 4.85
439 440 2.270527 GAGGCTGAGGACCCTTGC 59.729 66.667 0.00 6.49 0.00 4.01
440 441 2.581354 CGAGGCTGAGGACCCTTG 59.419 66.667 0.00 0.00 0.00 3.61
441 442 3.394836 GCGAGGCTGAGGACCCTT 61.395 66.667 0.00 0.00 0.00 3.95
444 445 4.200283 CTCGCGAGGCTGAGGACC 62.200 72.222 28.40 0.00 0.00 4.46
445 446 4.863925 GCTCGCGAGGCTGAGGAC 62.864 72.222 35.10 13.87 32.82 3.85
447 448 4.869440 CTGCTCGCGAGGCTGAGG 62.869 72.222 35.10 11.60 32.82 3.86
448 449 3.754740 CTCTGCTCGCGAGGCTGAG 62.755 68.421 35.10 32.81 42.15 3.35
449 450 3.819920 CTCTGCTCGCGAGGCTGA 61.820 66.667 35.10 29.43 35.35 4.26
453 454 3.184683 GTTGCTCTGCTCGCGAGG 61.185 66.667 35.10 20.83 0.00 4.63
454 455 3.540014 CGTTGCTCTGCTCGCGAG 61.540 66.667 31.37 31.37 0.00 5.03
458 459 3.020026 CTTGGCGTTGCTCTGCTCG 62.020 63.158 0.00 0.00 0.00 5.03
459 460 1.669115 TCTTGGCGTTGCTCTGCTC 60.669 57.895 0.00 0.00 0.00 4.26
460 461 1.963338 GTCTTGGCGTTGCTCTGCT 60.963 57.895 0.00 0.00 0.00 4.24
461 462 2.558313 GTCTTGGCGTTGCTCTGC 59.442 61.111 0.00 0.00 0.00 4.26
462 463 1.294659 GAGGTCTTGGCGTTGCTCTG 61.295 60.000 0.00 0.00 0.00 3.35
463 464 1.004440 GAGGTCTTGGCGTTGCTCT 60.004 57.895 0.00 0.00 0.00 4.09
464 465 2.035442 GGAGGTCTTGGCGTTGCTC 61.035 63.158 0.00 0.00 0.00 4.26
465 466 2.032681 GGAGGTCTTGGCGTTGCT 59.967 61.111 0.00 0.00 0.00 3.91
466 467 3.056328 GGGAGGTCTTGGCGTTGC 61.056 66.667 0.00 0.00 0.00 4.17
467 468 2.742372 CGGGAGGTCTTGGCGTTG 60.742 66.667 0.00 0.00 0.00 4.10
468 469 2.920912 TCGGGAGGTCTTGGCGTT 60.921 61.111 0.00 0.00 0.00 4.84
469 470 3.382832 CTCGGGAGGTCTTGGCGT 61.383 66.667 0.00 0.00 0.00 5.68
470 471 4.148825 CCTCGGGAGGTCTTGGCG 62.149 72.222 6.56 0.00 43.61 5.69
483 484 3.382803 CTTGGAGAGCTGCCCCTCG 62.383 68.421 11.75 0.00 36.95 4.63
484 485 2.588989 CTTGGAGAGCTGCCCCTC 59.411 66.667 10.16 10.16 0.00 4.30
502 503 3.876198 GGTTGCGCGCCATACTGG 61.876 66.667 30.77 0.00 41.55 4.00
503 504 3.124270 TGGTTGCGCGCCATACTG 61.124 61.111 30.77 0.00 0.00 2.74
504 505 3.124921 GTGGTTGCGCGCCATACT 61.125 61.111 30.77 0.00 38.40 2.12
505 506 4.174129 GGTGGTTGCGCGCCATAC 62.174 66.667 30.77 22.54 38.40 2.39
506 507 4.402528 AGGTGGTTGCGCGCCATA 62.403 61.111 30.77 11.46 38.40 2.74
511 512 4.025401 GTTGGAGGTGGTTGCGCG 62.025 66.667 0.00 0.00 0.00 6.86
512 513 4.025401 CGTTGGAGGTGGTTGCGC 62.025 66.667 0.00 0.00 0.00 6.09
513 514 2.280524 TCGTTGGAGGTGGTTGCG 60.281 61.111 0.00 0.00 0.00 4.85
514 515 1.525077 TGTCGTTGGAGGTGGTTGC 60.525 57.895 0.00 0.00 0.00 4.17
515 516 1.495584 CGTGTCGTTGGAGGTGGTTG 61.496 60.000 0.00 0.00 0.00 3.77
516 517 1.227438 CGTGTCGTTGGAGGTGGTT 60.227 57.895 0.00 0.00 0.00 3.67
517 518 2.420043 CGTGTCGTTGGAGGTGGT 59.580 61.111 0.00 0.00 0.00 4.16
518 519 3.041940 GCGTGTCGTTGGAGGTGG 61.042 66.667 0.00 0.00 0.00 4.61
519 520 2.279851 TGCGTGTCGTTGGAGGTG 60.280 61.111 0.00 0.00 0.00 4.00
520 521 2.029073 CTGCGTGTCGTTGGAGGT 59.971 61.111 0.00 0.00 0.00 3.85
521 522 3.414700 GCTGCGTGTCGTTGGAGG 61.415 66.667 0.00 0.00 0.00 4.30
522 523 1.498865 AAAGCTGCGTGTCGTTGGAG 61.499 55.000 0.00 0.00 0.00 3.86
523 524 1.495584 GAAAGCTGCGTGTCGTTGGA 61.496 55.000 0.00 0.00 0.00 3.53
524 525 1.082756 GAAAGCTGCGTGTCGTTGG 60.083 57.895 0.00 0.00 0.00 3.77
525 526 1.437089 CGAAAGCTGCGTGTCGTTG 60.437 57.895 12.41 0.00 0.00 4.10
526 527 1.149361 TTCGAAAGCTGCGTGTCGTT 61.149 50.000 17.60 0.00 35.09 3.85
527 528 1.149361 TTTCGAAAGCTGCGTGTCGT 61.149 50.000 6.47 0.00 35.09 4.34
528 529 0.718220 GTTTCGAAAGCTGCGTGTCG 60.718 55.000 11.66 13.86 34.85 4.35
529 530 0.384353 GGTTTCGAAAGCTGCGTGTC 60.384 55.000 28.04 6.80 33.81 3.67
530 531 1.647084 GGTTTCGAAAGCTGCGTGT 59.353 52.632 28.04 0.00 33.81 4.49
531 532 1.082104 GGGTTTCGAAAGCTGCGTG 60.082 57.895 32.01 0.00 36.67 5.34
532 533 0.889186 ATGGGTTTCGAAAGCTGCGT 60.889 50.000 32.01 18.88 36.67 5.24
533 534 0.179189 GATGGGTTTCGAAAGCTGCG 60.179 55.000 32.01 3.05 36.67 5.18
534 535 0.179189 CGATGGGTTTCGAAAGCTGC 60.179 55.000 32.01 20.46 41.62 5.25
535 536 0.447801 CCGATGGGTTTCGAAAGCTG 59.552 55.000 32.01 21.13 41.62 4.24
536 537 1.305930 GCCGATGGGTTTCGAAAGCT 61.306 55.000 32.01 18.46 41.62 3.74
537 538 1.136774 GCCGATGGGTTTCGAAAGC 59.863 57.895 27.58 27.58 41.62 3.51
538 539 1.296056 ACGCCGATGGGTTTCGAAAG 61.296 55.000 11.66 0.00 41.62 2.62
539 540 0.885596 AACGCCGATGGGTTTCGAAA 60.886 50.000 6.47 6.47 44.38 3.46
540 541 1.293267 GAACGCCGATGGGTTTCGAA 61.293 55.000 0.00 0.00 46.45 3.71
541 542 1.738830 GAACGCCGATGGGTTTCGA 60.739 57.895 0.00 0.00 46.45 3.71
542 543 1.693083 GAGAACGCCGATGGGTTTCG 61.693 60.000 0.00 0.00 46.45 3.46
543 544 0.391263 AGAGAACGCCGATGGGTTTC 60.391 55.000 0.00 0.00 46.45 2.78
544 545 0.036306 AAGAGAACGCCGATGGGTTT 59.964 50.000 0.00 0.00 46.45 3.27
546 547 1.218316 GAAGAGAACGCCGATGGGT 59.782 57.895 0.00 0.00 39.71 4.51
547 548 0.179073 ATGAAGAGAACGCCGATGGG 60.179 55.000 0.00 0.00 0.00 4.00
548 549 1.202463 AGATGAAGAGAACGCCGATGG 60.202 52.381 0.00 0.00 0.00 3.51
549 550 2.215907 AGATGAAGAGAACGCCGATG 57.784 50.000 0.00 0.00 0.00 3.84
550 551 2.544685 CAAGATGAAGAGAACGCCGAT 58.455 47.619 0.00 0.00 0.00 4.18
551 552 1.996292 CAAGATGAAGAGAACGCCGA 58.004 50.000 0.00 0.00 0.00 5.54
552 553 0.371645 GCAAGATGAAGAGAACGCCG 59.628 55.000 0.00 0.00 0.00 6.46
553 554 0.729690 GGCAAGATGAAGAGAACGCC 59.270 55.000 0.00 0.00 0.00 5.68
554 555 1.731720 AGGCAAGATGAAGAGAACGC 58.268 50.000 0.00 0.00 0.00 4.84
555 556 6.428385 AAAATAGGCAAGATGAAGAGAACG 57.572 37.500 0.00 0.00 0.00 3.95
556 557 9.336171 AGATAAAATAGGCAAGATGAAGAGAAC 57.664 33.333 0.00 0.00 0.00 3.01
558 559 9.988815 GTAGATAAAATAGGCAAGATGAAGAGA 57.011 33.333 0.00 0.00 0.00 3.10
559 560 9.995003 AGTAGATAAAATAGGCAAGATGAAGAG 57.005 33.333 0.00 0.00 0.00 2.85
563 564 9.905713 ACAAAGTAGATAAAATAGGCAAGATGA 57.094 29.630 0.00 0.00 0.00 2.92
615 618 4.669318 AGATCGATCGAACAATACAACGT 58.331 39.130 23.50 0.00 0.00 3.99
616 619 5.621635 AAGATCGATCGAACAATACAACG 57.378 39.130 23.50 0.00 0.00 4.10
617 620 8.282124 TCATAAGATCGATCGAACAATACAAC 57.718 34.615 23.50 5.42 0.00 3.32
618 621 8.865590 TTCATAAGATCGATCGAACAATACAA 57.134 30.769 23.50 7.96 0.00 2.41
619 622 7.114953 GCTTCATAAGATCGATCGAACAATACA 59.885 37.037 23.50 4.32 0.00 2.29
620 623 7.410942 GGCTTCATAAGATCGATCGAACAATAC 60.411 40.741 23.50 9.36 0.00 1.89
622 625 5.406780 GGCTTCATAAGATCGATCGAACAAT 59.593 40.000 23.50 13.81 0.00 2.71
623 626 4.745125 GGCTTCATAAGATCGATCGAACAA 59.255 41.667 23.50 12.07 0.00 2.83
625 628 4.551388 AGGCTTCATAAGATCGATCGAAC 58.449 43.478 23.50 19.89 0.00 3.95
628 631 6.808704 TGAAATAGGCTTCATAAGATCGATCG 59.191 38.462 19.33 9.36 30.31 3.69
629 632 8.602328 CATGAAATAGGCTTCATAAGATCGATC 58.398 37.037 17.91 17.91 42.79 3.69
630 633 8.316946 TCATGAAATAGGCTTCATAAGATCGAT 58.683 33.333 0.00 0.00 42.79 3.59
661 664 2.036475 CTGTACCAGCATAAGATCGCCT 59.964 50.000 0.00 0.00 0.00 5.52
682 685 0.745845 ATCGTGCTTCCACATGCTCC 60.746 55.000 0.00 0.00 42.17 4.70
687 690 0.107508 CAGGGATCGTGCTTCCACAT 60.108 55.000 0.00 0.00 42.17 3.21
719 722 5.348724 TCGATTTTTCTCAGATTCAACGAGG 59.651 40.000 0.00 0.00 0.00 4.63
750 789 2.086869 CACCATGGCCCAATATCGATC 58.913 52.381 13.04 0.00 0.00 3.69
791 830 2.797278 GCCTAGCGCTCTAGCCCAA 61.797 63.158 16.34 0.00 40.73 4.12
1574 1906 0.739112 CGTTTGCTGCCTCCTCTCTC 60.739 60.000 0.00 0.00 0.00 3.20
1870 2202 2.035442 GCTTCTTCCTCACCACCGC 61.035 63.158 0.00 0.00 0.00 5.68
1907 2239 2.235155 TGCGCCAGGTTTAATCAGTCTA 59.765 45.455 4.18 0.00 0.00 2.59
1961 2293 8.437274 AAGTAATATGAATCGGAGGGAGTAAT 57.563 34.615 0.00 0.00 0.00 1.89
1967 2299 7.841956 AGTGATAAGTAATATGAATCGGAGGG 58.158 38.462 0.00 0.00 0.00 4.30
2080 2412 9.347240 CCCATGTAATCAATCAAGAATAGAAGT 57.653 33.333 0.00 0.00 0.00 3.01
2081 2413 8.790718 CCCCATGTAATCAATCAAGAATAGAAG 58.209 37.037 0.00 0.00 0.00 2.85
2082 2414 8.501904 TCCCCATGTAATCAATCAAGAATAGAA 58.498 33.333 0.00 0.00 0.00 2.10
2083 2415 8.044574 TCCCCATGTAATCAATCAAGAATAGA 57.955 34.615 0.00 0.00 0.00 1.98
2084 2416 7.094463 GCTCCCCATGTAATCAATCAAGAATAG 60.094 40.741 0.00 0.00 0.00 1.73
2216 3452 3.535561 AGATTGTGGGCAAGAATAGTCG 58.464 45.455 0.00 0.00 38.10 4.18
2224 3460 5.895636 TGTACATTTAGATTGTGGGCAAG 57.104 39.130 0.00 0.00 38.10 4.01
2258 3494 6.238157 GCTGAAGAGTAATTTCATGAGAGCAG 60.238 42.308 0.00 0.00 34.33 4.24
2361 3600 2.385417 ACCCAAAATAACCTCCCCACAT 59.615 45.455 0.00 0.00 0.00 3.21
2367 3606 5.304871 TGGTTTTACACCCAAAATAACCTCC 59.695 40.000 0.00 0.00 46.68 4.30
2368 3607 6.408107 TGGTTTTACACCCAAAATAACCTC 57.592 37.500 0.00 0.00 46.68 3.85
2372 3611 7.445945 CAAGGATGGTTTTACACCCAAAATAA 58.554 34.615 0.00 0.00 46.68 1.40
2458 3704 8.562892 GTGGATGAACATGAGAATTACATTAGG 58.437 37.037 0.00 0.00 0.00 2.69
2543 3791 8.713036 AGCAGAGAGAAAATAGGAGATAAATGT 58.287 33.333 0.00 0.00 0.00 2.71
2607 3855 9.950680 TTTTGTCTACTCAGTTCAATTCAAATC 57.049 29.630 0.00 0.00 0.00 2.17
2621 3869 6.073276 CGAACCATGAACATTTTGTCTACTCA 60.073 38.462 0.00 0.00 0.00 3.41
2634 3882 1.069935 TGTCGGCGAACCATGAACA 59.930 52.632 12.92 0.00 34.57 3.18
2635 3883 0.949105 AGTGTCGGCGAACCATGAAC 60.949 55.000 12.92 0.00 34.57 3.18
2636 3884 0.669318 GAGTGTCGGCGAACCATGAA 60.669 55.000 12.92 0.00 34.57 2.57
2637 3885 1.080093 GAGTGTCGGCGAACCATGA 60.080 57.895 12.92 0.00 34.57 3.07
2638 3886 2.100631 GGAGTGTCGGCGAACCATG 61.101 63.158 12.92 0.00 34.57 3.66
2639 3887 2.107041 TTGGAGTGTCGGCGAACCAT 62.107 55.000 12.92 0.00 34.57 3.55
2640 3888 2.313051 TTTGGAGTGTCGGCGAACCA 62.313 55.000 12.92 16.03 34.57 3.67
2641 3889 1.566018 CTTTGGAGTGTCGGCGAACC 61.566 60.000 12.92 13.52 0.00 3.62
2642 3890 0.599204 TCTTTGGAGTGTCGGCGAAC 60.599 55.000 12.92 12.49 0.00 3.95
2643 3891 0.105224 TTCTTTGGAGTGTCGGCGAA 59.895 50.000 12.92 0.00 0.00 4.70
2654 3902 2.727123 TGCTTCACTGGTTCTTTGGA 57.273 45.000 0.00 0.00 0.00 3.53
2674 3922 3.872603 AAGCTCCGGTGCACCACA 61.873 61.111 34.16 19.14 35.86 4.17
2675 3923 3.357079 CAAGCTCCGGTGCACCAC 61.357 66.667 34.16 20.03 35.14 4.16
2676 3924 3.872603 ACAAGCTCCGGTGCACCA 61.873 61.111 34.16 16.11 35.14 4.17
2677 3925 3.357079 CACAAGCTCCGGTGCACC 61.357 66.667 28.68 26.78 34.99 5.01
2678 3926 3.357079 CCACAAGCTCCGGTGCAC 61.357 66.667 28.68 8.80 33.72 4.57
2679 3927 3.872603 ACCACAAGCTCCGGTGCA 61.873 61.111 28.68 0.00 33.72 4.57
2680 3928 3.357079 CACCACAAGCTCCGGTGC 61.357 66.667 20.71 20.71 43.43 5.01
2682 3930 2.214216 TAGCACCACAAGCTCCGGT 61.214 57.895 0.00 0.00 42.32 5.28
2683 3931 1.741770 GTAGCACCACAAGCTCCGG 60.742 63.158 0.00 0.00 42.32 5.14
2684 3932 1.741770 GGTAGCACCACAAGCTCCG 60.742 63.158 0.00 0.00 42.32 4.63
2685 3933 0.674895 CTGGTAGCACCACAAGCTCC 60.675 60.000 4.16 0.00 44.79 4.70
2686 3934 0.035458 ACTGGTAGCACCACAAGCTC 59.965 55.000 4.16 0.00 44.79 4.09
2687 3935 0.250467 CACTGGTAGCACCACAAGCT 60.250 55.000 4.16 0.00 44.79 3.74
2688 3936 1.856265 GCACTGGTAGCACCACAAGC 61.856 60.000 4.16 5.43 44.79 4.01
2689 3937 0.534877 TGCACTGGTAGCACCACAAG 60.535 55.000 4.16 0.00 44.79 3.16
2690 3938 1.529309 TGCACTGGTAGCACCACAA 59.471 52.632 4.16 0.00 44.79 3.33
2691 3939 3.235369 TGCACTGGTAGCACCACA 58.765 55.556 4.16 0.00 44.79 4.17
2696 3944 2.032528 GCTGGTGCACTGGTAGCA 59.967 61.111 17.98 3.82 40.19 3.49
2697 3945 2.032528 TGCTGGTGCACTGGTAGC 59.967 61.111 17.98 19.78 45.31 3.58
2706 3954 0.734942 GCACAATGTGATGCTGGTGC 60.735 55.000 18.66 0.00 43.78 5.01
2707 3955 3.411808 GCACAATGTGATGCTGGTG 57.588 52.632 18.66 0.00 38.84 4.17
2712 3960 6.890558 ACATTTTTAAAGCACAATGTGATGC 58.109 32.000 18.66 1.36 38.22 3.91
2713 3961 8.549548 TGAACATTTTTAAAGCACAATGTGATG 58.450 29.630 18.66 11.17 39.31 3.07
2714 3962 8.659925 TGAACATTTTTAAAGCACAATGTGAT 57.340 26.923 18.66 8.23 39.31 3.06
2715 3963 8.484641 TTGAACATTTTTAAAGCACAATGTGA 57.515 26.923 18.66 0.00 39.31 3.58
2716 3964 9.552114 TTTTGAACATTTTTAAAGCACAATGTG 57.448 25.926 9.36 9.36 39.31 3.21
2749 3997 9.226345 GCTGTATGAGTGTGCTAATTATTTTTC 57.774 33.333 0.00 0.00 0.00 2.29
2750 3998 8.739039 TGCTGTATGAGTGTGCTAATTATTTTT 58.261 29.630 0.00 0.00 0.00 1.94
2751 3999 8.279970 TGCTGTATGAGTGTGCTAATTATTTT 57.720 30.769 0.00 0.00 0.00 1.82
2752 4000 7.864108 TGCTGTATGAGTGTGCTAATTATTT 57.136 32.000 0.00 0.00 0.00 1.40
2753 4001 7.095481 CGATGCTGTATGAGTGTGCTAATTATT 60.095 37.037 0.00 0.00 0.00 1.40
2754 4002 6.367149 CGATGCTGTATGAGTGTGCTAATTAT 59.633 38.462 0.00 0.00 0.00 1.28
2755 4003 5.691754 CGATGCTGTATGAGTGTGCTAATTA 59.308 40.000 0.00 0.00 0.00 1.40
2756 4004 4.509230 CGATGCTGTATGAGTGTGCTAATT 59.491 41.667 0.00 0.00 0.00 1.40
2757 4005 4.053983 CGATGCTGTATGAGTGTGCTAAT 58.946 43.478 0.00 0.00 0.00 1.73
2758 4006 3.130340 TCGATGCTGTATGAGTGTGCTAA 59.870 43.478 0.00 0.00 0.00 3.09
2759 4007 2.687935 TCGATGCTGTATGAGTGTGCTA 59.312 45.455 0.00 0.00 0.00 3.49
2760 4008 1.478105 TCGATGCTGTATGAGTGTGCT 59.522 47.619 0.00 0.00 0.00 4.40
2761 4009 1.590238 GTCGATGCTGTATGAGTGTGC 59.410 52.381 0.00 0.00 0.00 4.57
2762 4010 1.848608 CGTCGATGCTGTATGAGTGTG 59.151 52.381 0.00 0.00 0.00 3.82
2763 4011 1.472878 ACGTCGATGCTGTATGAGTGT 59.527 47.619 4.06 0.00 0.00 3.55
2764 4012 2.194800 ACGTCGATGCTGTATGAGTG 57.805 50.000 4.06 0.00 0.00 3.51
2765 4013 2.290916 CCTACGTCGATGCTGTATGAGT 59.709 50.000 4.06 0.00 0.00 3.41
2766 4014 2.290916 ACCTACGTCGATGCTGTATGAG 59.709 50.000 4.06 0.00 0.00 2.90
2767 4015 2.294979 ACCTACGTCGATGCTGTATGA 58.705 47.619 4.06 0.00 0.00 2.15
2768 4016 2.776312 ACCTACGTCGATGCTGTATG 57.224 50.000 4.06 0.00 0.00 2.39
2769 4017 2.426024 ACAACCTACGTCGATGCTGTAT 59.574 45.455 4.06 0.00 0.00 2.29
2770 4018 1.814394 ACAACCTACGTCGATGCTGTA 59.186 47.619 4.06 0.00 0.00 2.74
2771 4019 0.601558 ACAACCTACGTCGATGCTGT 59.398 50.000 4.06 0.00 0.00 4.40
2772 4020 1.269166 GACAACCTACGTCGATGCTG 58.731 55.000 4.06 0.00 0.00 4.41
2773 4021 0.885879 TGACAACCTACGTCGATGCT 59.114 50.000 4.06 0.00 36.11 3.79
2774 4022 0.989890 GTGACAACCTACGTCGATGC 59.010 55.000 4.06 0.00 36.11 3.91
2775 4023 2.341318 TGTGACAACCTACGTCGATG 57.659 50.000 2.26 2.26 36.11 3.84
2776 4024 3.374220 TTTGTGACAACCTACGTCGAT 57.626 42.857 0.00 0.00 36.11 3.59
2777 4025 2.867287 TTTGTGACAACCTACGTCGA 57.133 45.000 0.00 0.00 36.11 4.20
2778 4026 4.461992 AATTTTGTGACAACCTACGTCG 57.538 40.909 0.00 0.00 36.11 5.12
2779 4027 5.812652 TGAAATTTTGTGACAACCTACGTC 58.187 37.500 0.00 0.00 0.00 4.34
2780 4028 5.821516 TGAAATTTTGTGACAACCTACGT 57.178 34.783 0.00 0.00 0.00 3.57
2781 4029 6.262601 ACTTGAAATTTTGTGACAACCTACG 58.737 36.000 0.00 0.00 0.00 3.51
2812 4060 8.844441 ATTTTGTTTTTCGAGTTATGTTTCGA 57.156 26.923 0.00 0.00 43.38 3.71
2813 4061 9.340327 CAATTTTGTTTTTCGAGTTATGTTTCG 57.660 29.630 0.00 0.00 38.13 3.46
2816 4064 9.360093 TGTCAATTTTGTTTTTCGAGTTATGTT 57.640 25.926 0.00 0.00 0.00 2.71
2817 4065 8.918961 TGTCAATTTTGTTTTTCGAGTTATGT 57.081 26.923 0.00 0.00 0.00 2.29
2821 4069 8.930760 TGAAATGTCAATTTTGTTTTTCGAGTT 58.069 25.926 0.00 0.00 36.10 3.01
2822 4070 8.472683 TGAAATGTCAATTTTGTTTTTCGAGT 57.527 26.923 0.00 0.00 36.10 4.18
2823 4071 9.198065 GTTGAAATGTCAATTTTGTTTTTCGAG 57.802 29.630 0.61 0.00 45.38 4.04
2824 4072 8.712363 TGTTGAAATGTCAATTTTGTTTTTCGA 58.288 25.926 0.61 0.00 45.38 3.71
2825 4073 8.871742 TGTTGAAATGTCAATTTTGTTTTTCG 57.128 26.923 0.61 0.00 45.38 3.46
2850 4098 9.321562 CCCAAGTTATGTTACGTACTATTCAAT 57.678 33.333 0.00 0.00 0.00 2.57
2851 4099 7.278424 GCCCAAGTTATGTTACGTACTATTCAA 59.722 37.037 0.00 0.00 0.00 2.69
2852 4100 6.757947 GCCCAAGTTATGTTACGTACTATTCA 59.242 38.462 0.00 0.00 0.00 2.57
2853 4101 6.074676 CGCCCAAGTTATGTTACGTACTATTC 60.075 42.308 0.00 0.00 0.00 1.75
2854 4102 5.750067 CGCCCAAGTTATGTTACGTACTATT 59.250 40.000 0.00 0.00 0.00 1.73
2855 4103 5.067674 TCGCCCAAGTTATGTTACGTACTAT 59.932 40.000 0.00 0.00 0.00 2.12
2856 4104 4.397730 TCGCCCAAGTTATGTTACGTACTA 59.602 41.667 0.00 0.00 0.00 1.82
2857 4105 3.193267 TCGCCCAAGTTATGTTACGTACT 59.807 43.478 0.00 0.00 0.00 2.73
2858 4106 3.510719 TCGCCCAAGTTATGTTACGTAC 58.489 45.455 0.00 0.00 0.00 3.67
2859 4107 3.865011 TCGCCCAAGTTATGTTACGTA 57.135 42.857 0.00 0.00 0.00 3.57
2860 4108 2.747396 TCGCCCAAGTTATGTTACGT 57.253 45.000 0.00 0.00 0.00 3.57
2861 4109 4.339429 CAAATCGCCCAAGTTATGTTACG 58.661 43.478 0.00 0.00 0.00 3.18
2862 4110 4.668289 CCAAATCGCCCAAGTTATGTTAC 58.332 43.478 0.00 0.00 0.00 2.50
2863 4111 3.129638 GCCAAATCGCCCAAGTTATGTTA 59.870 43.478 0.00 0.00 0.00 2.41
2864 4112 2.094234 GCCAAATCGCCCAAGTTATGTT 60.094 45.455 0.00 0.00 0.00 2.71
2865 4113 1.476488 GCCAAATCGCCCAAGTTATGT 59.524 47.619 0.00 0.00 0.00 2.29
2866 4114 1.202405 GGCCAAATCGCCCAAGTTATG 60.202 52.381 0.00 0.00 43.66 1.90
2867 4115 1.111277 GGCCAAATCGCCCAAGTTAT 58.889 50.000 0.00 0.00 43.66 1.89
2868 4116 2.573920 GGCCAAATCGCCCAAGTTA 58.426 52.632 0.00 0.00 43.66 2.24
2869 4117 3.376546 GGCCAAATCGCCCAAGTT 58.623 55.556 0.00 0.00 43.66 2.66
2876 4124 1.680735 TGTGATAATGGGCCAAATCGC 59.319 47.619 26.69 26.69 0.00 4.58
2877 4125 2.951642 AGTGTGATAATGGGCCAAATCG 59.048 45.455 11.89 0.00 0.00 3.34
2878 4126 3.953612 TCAGTGTGATAATGGGCCAAATC 59.046 43.478 11.89 17.28 0.00 2.17
2879 4127 3.979911 TCAGTGTGATAATGGGCCAAAT 58.020 40.909 11.89 7.49 0.00 2.32
2880 4128 3.448093 TCAGTGTGATAATGGGCCAAA 57.552 42.857 11.89 1.34 0.00 3.28
2881 4129 3.289836 CATCAGTGTGATAATGGGCCAA 58.710 45.455 11.89 0.00 34.28 4.52
2882 4130 2.241941 ACATCAGTGTGATAATGGGCCA 59.758 45.455 9.61 9.61 34.28 5.36
2883 4131 2.880890 GACATCAGTGTGATAATGGGCC 59.119 50.000 0.00 0.00 39.09 5.80
2884 4132 3.544684 TGACATCAGTGTGATAATGGGC 58.455 45.455 0.00 0.00 39.09 5.36
2885 4133 6.704289 ATTTGACATCAGTGTGATAATGGG 57.296 37.500 0.00 0.00 39.09 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.