Multiple sequence alignment - TraesCS1A01G273300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G273300 chr1A 100.000 2492 0 0 1 2492 467164063 467161572 0.000000e+00 4602.0
1 TraesCS1A01G273300 chr1D 83.243 1653 146 60 521 2119 367840830 367839255 0.000000e+00 1397.0
2 TraesCS1A01G273300 chr1D 95.556 135 6 0 2358 2492 367839252 367839118 1.500000e-52 217.0
3 TraesCS1A01G273300 chr1D 92.391 92 4 1 233 324 367844568 367844480 7.230000e-26 128.0
4 TraesCS1A01G273300 chr1B 84.088 1458 134 41 407 1807 492301985 492300569 0.000000e+00 1317.0
5 TraesCS1A01G273300 chr1B 95.935 123 5 0 2357 2479 492300346 492300224 1.510000e-47 200.0
6 TraesCS1A01G273300 chr1B 97.561 41 1 0 265 305 492302126 492302086 1.240000e-08 71.3
7 TraesCS1A01G273300 chr1B 95.455 44 2 0 233 276 492302186 492302143 1.240000e-08 71.3
8 TraesCS1A01G273300 chr7D 94.894 235 10 2 1 234 384053071 384053304 1.410000e-97 366.0
9 TraesCS1A01G273300 chr7D 94.850 233 12 0 1 233 460639932 460640164 5.070000e-97 364.0
10 TraesCS1A01G273300 chr7D 94.421 233 13 0 1 233 402671815 402672047 2.360000e-95 359.0
11 TraesCS1A01G273300 chr7D 94.421 233 13 0 1 233 550271370 550271138 2.360000e-95 359.0
12 TraesCS1A01G273300 chr7D 94.043 235 14 0 1 235 505909865 505910099 8.480000e-95 357.0
13 TraesCS1A01G273300 chr7D 82.533 229 37 3 2130 2355 593396384 593396612 5.440000e-47 198.0
14 TraesCS1A01G273300 chr5D 94.850 233 12 0 1 233 455877394 455877162 5.070000e-97 364.0
15 TraesCS1A01G273300 chr5D 82.791 215 32 5 2143 2353 481641811 481641598 1.180000e-43 187.0
16 TraesCS1A01G273300 chr5D 81.773 203 33 4 2143 2343 498298756 498298556 1.530000e-37 167.0
17 TraesCS1A01G273300 chr4D 94.118 238 13 1 1 237 92080401 92080638 6.550000e-96 361.0
18 TraesCS1A01G273300 chr3D 93.443 244 12 3 1 241 578843720 578843478 2.360000e-95 359.0
19 TraesCS1A01G273300 chr3D 82.326 215 35 3 2143 2355 580370252 580370039 1.520000e-42 183.0
20 TraesCS1A01G273300 chr3D 79.825 228 37 8 2132 2355 387560026 387560248 9.230000e-35 158.0
21 TraesCS1A01G273300 chrUn 93.724 239 12 2 1 237 479891521 479891758 3.050000e-94 355.0
22 TraesCS1A01G273300 chr3B 83.645 214 32 3 2143 2354 779625058 779624846 5.440000e-47 198.0
23 TraesCS1A01G273300 chr7B 82.028 217 37 2 2143 2357 74108324 74108108 1.520000e-42 183.0
24 TraesCS1A01G273300 chr7B 81.448 221 37 3 2130 2348 680338315 680338533 7.080000e-41 178.0
25 TraesCS1A01G273300 chr7A 81.340 209 32 6 2145 2348 693106181 693106387 1.980000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G273300 chr1A 467161572 467164063 2491 True 4602.000000 4602 100.000000 1 2492 1 chr1A.!!$R1 2491
1 TraesCS1A01G273300 chr1D 367839118 367844568 5450 True 580.666667 1397 90.396667 233 2492 3 chr1D.!!$R1 2259
2 TraesCS1A01G273300 chr1B 492300224 492302186 1962 True 414.900000 1317 93.259750 233 2479 4 chr1B.!!$R1 2246

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
524 4195 0.033228 CAGCTCGACCATGGAGATCC 59.967 60.0 21.47 10.86 33.27 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2354 6126 0.040425 CAACTGTTAGGCGTGCAACC 60.04 55.0 0.0 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.989831 CCGTTACGGGTTTATTTTCGTC 58.010 45.455 17.00 0.00 44.15 4.20
34 35 3.181521 CCGTTACGGGTTTATTTTCGTCC 60.182 47.826 17.00 0.00 44.15 4.79
35 36 3.181521 CGTTACGGGTTTATTTTCGTCCC 60.182 47.826 0.00 0.00 37.10 4.46
36 37 2.565046 ACGGGTTTATTTTCGTCCCA 57.435 45.000 0.00 0.00 38.15 4.37
37 38 2.153645 ACGGGTTTATTTTCGTCCCAC 58.846 47.619 0.00 0.00 38.15 4.61
38 39 1.469703 CGGGTTTATTTTCGTCCCACC 59.530 52.381 0.00 0.00 38.15 4.61
39 40 2.799017 GGGTTTATTTTCGTCCCACCT 58.201 47.619 0.00 0.00 38.15 4.00
40 41 3.159472 GGGTTTATTTTCGTCCCACCTT 58.841 45.455 0.00 0.00 38.15 3.50
41 42 3.192001 GGGTTTATTTTCGTCCCACCTTC 59.808 47.826 0.00 0.00 38.15 3.46
42 43 3.192001 GGTTTATTTTCGTCCCACCTTCC 59.808 47.826 0.00 0.00 0.00 3.46
43 44 2.389962 TATTTTCGTCCCACCTTCCG 57.610 50.000 0.00 0.00 0.00 4.30
44 45 0.688487 ATTTTCGTCCCACCTTCCGA 59.312 50.000 0.00 0.00 0.00 4.55
45 46 0.034337 TTTTCGTCCCACCTTCCGAG 59.966 55.000 0.00 0.00 0.00 4.63
46 47 1.117142 TTTCGTCCCACCTTCCGAGT 61.117 55.000 0.00 0.00 0.00 4.18
47 48 1.812686 TTCGTCCCACCTTCCGAGTG 61.813 60.000 0.00 0.00 34.91 3.51
48 49 2.273179 CGTCCCACCTTCCGAGTGA 61.273 63.158 0.00 0.00 37.42 3.41
49 50 1.592223 GTCCCACCTTCCGAGTGAG 59.408 63.158 0.00 0.00 37.42 3.51
50 51 1.609501 TCCCACCTTCCGAGTGAGG 60.610 63.158 0.00 0.00 37.42 3.86
51 52 2.660064 CCCACCTTCCGAGTGAGGG 61.660 68.421 0.00 0.00 45.61 4.30
52 53 1.609501 CCACCTTCCGAGTGAGGGA 60.610 63.158 0.00 0.00 42.84 4.20
53 54 1.608717 CCACCTTCCGAGTGAGGGAG 61.609 65.000 0.00 0.00 42.84 4.30
54 55 0.612174 CACCTTCCGAGTGAGGGAGA 60.612 60.000 0.00 0.00 42.84 3.71
55 56 0.323908 ACCTTCCGAGTGAGGGAGAG 60.324 60.000 0.00 0.00 42.84 3.20
56 57 1.040339 CCTTCCGAGTGAGGGAGAGG 61.040 65.000 0.00 0.00 42.84 3.69
57 58 1.000486 TTCCGAGTGAGGGAGAGGG 60.000 63.158 0.00 0.00 34.45 4.30
58 59 2.443016 CCGAGTGAGGGAGAGGGG 60.443 72.222 0.00 0.00 0.00 4.79
59 60 2.443016 CGAGTGAGGGAGAGGGGG 60.443 72.222 0.00 0.00 0.00 5.40
60 61 2.997584 CGAGTGAGGGAGAGGGGGA 61.998 68.421 0.00 0.00 0.00 4.81
61 62 1.075600 GAGTGAGGGAGAGGGGGAG 60.076 68.421 0.00 0.00 0.00 4.30
62 63 1.547755 AGTGAGGGAGAGGGGGAGA 60.548 63.158 0.00 0.00 0.00 3.71
63 64 1.075600 GTGAGGGAGAGGGGGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
64 65 1.230650 TGAGGGAGAGGGGGAGAGA 60.231 63.158 0.00 0.00 0.00 3.10
65 66 1.292941 TGAGGGAGAGGGGGAGAGAG 61.293 65.000 0.00 0.00 0.00 3.20
66 67 0.996762 GAGGGAGAGGGGGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
67 68 0.998945 AGGGAGAGGGGGAGAGAGAG 60.999 65.000 0.00 0.00 0.00 3.20
68 69 1.293683 GGGAGAGGGGGAGAGAGAGT 61.294 65.000 0.00 0.00 0.00 3.24
69 70 0.106217 GGAGAGGGGGAGAGAGAGTG 60.106 65.000 0.00 0.00 0.00 3.51
70 71 0.923358 GAGAGGGGGAGAGAGAGTGA 59.077 60.000 0.00 0.00 0.00 3.41
71 72 0.926293 AGAGGGGGAGAGAGAGTGAG 59.074 60.000 0.00 0.00 0.00 3.51
72 73 0.106217 GAGGGGGAGAGAGAGTGAGG 60.106 65.000 0.00 0.00 0.00 3.86
73 74 0.553862 AGGGGGAGAGAGAGTGAGGA 60.554 60.000 0.00 0.00 0.00 3.71
74 75 0.336737 GGGGGAGAGAGAGTGAGGAA 59.663 60.000 0.00 0.00 0.00 3.36
75 76 1.687996 GGGGGAGAGAGAGTGAGGAAG 60.688 61.905 0.00 0.00 0.00 3.46
76 77 1.286553 GGGGAGAGAGAGTGAGGAAGA 59.713 57.143 0.00 0.00 0.00 2.87
77 78 2.654863 GGGAGAGAGAGTGAGGAAGAG 58.345 57.143 0.00 0.00 0.00 2.85
78 79 2.654863 GGAGAGAGAGTGAGGAAGAGG 58.345 57.143 0.00 0.00 0.00 3.69
79 80 2.654863 GAGAGAGAGTGAGGAAGAGGG 58.345 57.143 0.00 0.00 0.00 4.30
80 81 2.241176 GAGAGAGAGTGAGGAAGAGGGA 59.759 54.545 0.00 0.00 0.00 4.20
81 82 2.242196 AGAGAGAGTGAGGAAGAGGGAG 59.758 54.545 0.00 0.00 0.00 4.30
82 83 1.287739 AGAGAGTGAGGAAGAGGGAGG 59.712 57.143 0.00 0.00 0.00 4.30
83 84 0.338120 AGAGTGAGGAAGAGGGAGGG 59.662 60.000 0.00 0.00 0.00 4.30
84 85 0.336737 GAGTGAGGAAGAGGGAGGGA 59.663 60.000 0.00 0.00 0.00 4.20
85 86 0.793617 AGTGAGGAAGAGGGAGGGAA 59.206 55.000 0.00 0.00 0.00 3.97
86 87 1.152271 AGTGAGGAAGAGGGAGGGAAA 59.848 52.381 0.00 0.00 0.00 3.13
87 88 1.557371 GTGAGGAAGAGGGAGGGAAAG 59.443 57.143 0.00 0.00 0.00 2.62
88 89 1.437149 TGAGGAAGAGGGAGGGAAAGA 59.563 52.381 0.00 0.00 0.00 2.52
89 90 2.115427 GAGGAAGAGGGAGGGAAAGAG 58.885 57.143 0.00 0.00 0.00 2.85
90 91 1.439143 AGGAAGAGGGAGGGAAAGAGT 59.561 52.381 0.00 0.00 0.00 3.24
91 92 1.557371 GGAAGAGGGAGGGAAAGAGTG 59.443 57.143 0.00 0.00 0.00 3.51
92 93 2.261729 GAAGAGGGAGGGAAAGAGTGT 58.738 52.381 0.00 0.00 0.00 3.55
93 94 1.650528 AGAGGGAGGGAAAGAGTGTG 58.349 55.000 0.00 0.00 0.00 3.82
94 95 1.132689 AGAGGGAGGGAAAGAGTGTGT 60.133 52.381 0.00 0.00 0.00 3.72
95 96 1.002544 GAGGGAGGGAAAGAGTGTGTG 59.997 57.143 0.00 0.00 0.00 3.82
96 97 0.765510 GGGAGGGAAAGAGTGTGTGT 59.234 55.000 0.00 0.00 0.00 3.72
97 98 1.543429 GGGAGGGAAAGAGTGTGTGTG 60.543 57.143 0.00 0.00 0.00 3.82
98 99 1.141053 GGAGGGAAAGAGTGTGTGTGT 59.859 52.381 0.00 0.00 0.00 3.72
99 100 2.213499 GAGGGAAAGAGTGTGTGTGTG 58.787 52.381 0.00 0.00 0.00 3.82
100 101 1.559682 AGGGAAAGAGTGTGTGTGTGT 59.440 47.619 0.00 0.00 0.00 3.72
101 102 1.670811 GGGAAAGAGTGTGTGTGTGTG 59.329 52.381 0.00 0.00 0.00 3.82
102 103 2.627945 GGAAAGAGTGTGTGTGTGTGA 58.372 47.619 0.00 0.00 0.00 3.58
103 104 3.006940 GGAAAGAGTGTGTGTGTGTGAA 58.993 45.455 0.00 0.00 0.00 3.18
104 105 3.627577 GGAAAGAGTGTGTGTGTGTGAAT 59.372 43.478 0.00 0.00 0.00 2.57
105 106 4.096382 GGAAAGAGTGTGTGTGTGTGAATT 59.904 41.667 0.00 0.00 0.00 2.17
106 107 5.393027 GGAAAGAGTGTGTGTGTGTGAATTT 60.393 40.000 0.00 0.00 0.00 1.82
107 108 4.621068 AGAGTGTGTGTGTGTGAATTTG 57.379 40.909 0.00 0.00 0.00 2.32
108 109 4.260985 AGAGTGTGTGTGTGTGAATTTGA 58.739 39.130 0.00 0.00 0.00 2.69
109 110 4.883585 AGAGTGTGTGTGTGTGAATTTGAT 59.116 37.500 0.00 0.00 0.00 2.57
110 111 4.923893 AGTGTGTGTGTGTGAATTTGATG 58.076 39.130 0.00 0.00 0.00 3.07
111 112 4.043750 GTGTGTGTGTGTGAATTTGATGG 58.956 43.478 0.00 0.00 0.00 3.51
112 113 3.698539 TGTGTGTGTGTGAATTTGATGGT 59.301 39.130 0.00 0.00 0.00 3.55
113 114 4.884164 TGTGTGTGTGTGAATTTGATGGTA 59.116 37.500 0.00 0.00 0.00 3.25
114 115 5.358160 TGTGTGTGTGTGAATTTGATGGTAA 59.642 36.000 0.00 0.00 0.00 2.85
115 116 6.127619 TGTGTGTGTGTGAATTTGATGGTAAA 60.128 34.615 0.00 0.00 0.00 2.01
116 117 6.754209 GTGTGTGTGTGAATTTGATGGTAAAA 59.246 34.615 0.00 0.00 0.00 1.52
117 118 7.276658 GTGTGTGTGTGAATTTGATGGTAAAAA 59.723 33.333 0.00 0.00 0.00 1.94
137 138 6.687081 AAAAAGGTCGTCAATGTCACTTAA 57.313 33.333 0.00 0.00 0.00 1.85
138 139 6.877611 AAAAGGTCGTCAATGTCACTTAAT 57.122 33.333 0.00 0.00 0.00 1.40
139 140 7.972832 AAAAGGTCGTCAATGTCACTTAATA 57.027 32.000 0.00 0.00 0.00 0.98
140 141 8.561738 AAAAGGTCGTCAATGTCACTTAATAT 57.438 30.769 0.00 0.00 0.00 1.28
141 142 7.539712 AAGGTCGTCAATGTCACTTAATATG 57.460 36.000 0.00 0.00 0.00 1.78
142 143 6.640518 AGGTCGTCAATGTCACTTAATATGT 58.359 36.000 0.00 0.00 0.00 2.29
143 144 7.778083 AGGTCGTCAATGTCACTTAATATGTA 58.222 34.615 0.00 0.00 0.00 2.29
144 145 8.421784 AGGTCGTCAATGTCACTTAATATGTAT 58.578 33.333 0.00 0.00 0.00 2.29
145 146 8.487970 GGTCGTCAATGTCACTTAATATGTATG 58.512 37.037 0.00 0.00 0.00 2.39
146 147 9.244799 GTCGTCAATGTCACTTAATATGTATGA 57.755 33.333 0.00 0.00 0.00 2.15
147 148 9.463443 TCGTCAATGTCACTTAATATGTATGAG 57.537 33.333 0.00 0.00 0.00 2.90
148 149 9.463443 CGTCAATGTCACTTAATATGTATGAGA 57.537 33.333 0.00 0.00 0.00 3.27
205 206 8.825667 TGAATTTTTAAAGTTAATGTGGCTCC 57.174 30.769 0.00 0.00 0.00 4.70
206 207 7.596995 TGAATTTTTAAAGTTAATGTGGCTCCG 59.403 33.333 0.00 0.00 0.00 4.63
207 208 6.394025 TTTTTAAAGTTAATGTGGCTCCGT 57.606 33.333 0.00 0.00 0.00 4.69
208 209 6.394025 TTTTAAAGTTAATGTGGCTCCGTT 57.606 33.333 0.00 0.00 0.00 4.44
209 210 3.915437 AAAGTTAATGTGGCTCCGTTG 57.085 42.857 0.00 0.00 0.00 4.10
210 211 1.165270 AGTTAATGTGGCTCCGTTGC 58.835 50.000 0.00 0.00 0.00 4.17
211 212 0.878416 GTTAATGTGGCTCCGTTGCA 59.122 50.000 0.00 0.00 34.04 4.08
212 213 1.268352 GTTAATGTGGCTCCGTTGCAA 59.732 47.619 0.00 0.00 34.04 4.08
213 214 1.832883 TAATGTGGCTCCGTTGCAAT 58.167 45.000 0.59 0.00 34.04 3.56
214 215 0.244450 AATGTGGCTCCGTTGCAATG 59.756 50.000 11.90 11.90 34.04 2.82
215 216 2.126346 GTGGCTCCGTTGCAATGC 60.126 61.111 13.42 10.11 34.04 3.56
216 217 2.596923 TGGCTCCGTTGCAATGCA 60.597 55.556 13.42 2.72 36.47 3.96
217 218 2.126346 GGCTCCGTTGCAATGCAC 60.126 61.111 7.72 2.39 38.71 4.57
218 219 2.629656 GGCTCCGTTGCAATGCACT 61.630 57.895 7.72 0.00 38.71 4.40
219 220 1.443194 GCTCCGTTGCAATGCACTG 60.443 57.895 7.72 2.79 38.71 3.66
220 221 1.855213 GCTCCGTTGCAATGCACTGA 61.855 55.000 7.72 3.82 38.71 3.41
221 222 0.110056 CTCCGTTGCAATGCACTGAC 60.110 55.000 7.72 2.47 38.71 3.51
222 223 1.440850 CCGTTGCAATGCACTGACG 60.441 57.895 20.10 20.10 38.71 4.35
223 224 1.279539 CGTTGCAATGCACTGACGT 59.720 52.632 19.14 0.00 38.71 4.34
224 225 0.316937 CGTTGCAATGCACTGACGTT 60.317 50.000 19.14 0.00 38.71 3.99
225 226 1.398595 GTTGCAATGCACTGACGTTC 58.601 50.000 7.72 0.00 38.71 3.95
226 227 1.002468 GTTGCAATGCACTGACGTTCT 60.002 47.619 7.72 0.00 38.71 3.01
227 228 1.308047 TGCAATGCACTGACGTTCTT 58.692 45.000 2.72 0.00 31.71 2.52
228 229 1.264020 TGCAATGCACTGACGTTCTTC 59.736 47.619 2.72 0.00 31.71 2.87
229 230 1.532868 GCAATGCACTGACGTTCTTCT 59.467 47.619 0.00 0.00 0.00 2.85
230 231 2.736721 GCAATGCACTGACGTTCTTCTA 59.263 45.455 0.00 0.00 0.00 2.10
231 232 3.181526 GCAATGCACTGACGTTCTTCTAG 60.182 47.826 0.00 0.00 0.00 2.43
260 261 5.185442 GGTAATGTATGGGCTACTACTCCTC 59.815 48.000 0.00 0.00 0.00 3.71
263 292 3.204606 TGTATGGGCTACTACTCCTCAGT 59.795 47.826 0.00 0.00 36.55 3.41
349 4020 4.286032 TGAAGGGATAAACTACACTGCACT 59.714 41.667 0.00 0.00 0.00 4.40
360 4031 2.317040 ACACTGCACTGGTACTGTAGT 58.683 47.619 0.00 0.00 38.84 2.73
361 4032 2.296471 ACACTGCACTGGTACTGTAGTC 59.704 50.000 2.06 0.00 38.84 2.59
362 4033 2.558795 CACTGCACTGGTACTGTAGTCT 59.441 50.000 2.06 0.00 38.84 3.24
363 4034 2.558795 ACTGCACTGGTACTGTAGTCTG 59.441 50.000 0.00 0.00 38.84 3.51
364 4035 2.558795 CTGCACTGGTACTGTAGTCTGT 59.441 50.000 0.00 0.00 38.84 3.41
365 4036 3.756963 CTGCACTGGTACTGTAGTCTGTA 59.243 47.826 0.00 0.00 38.84 2.74
366 4037 3.756963 TGCACTGGTACTGTAGTCTGTAG 59.243 47.826 0.00 0.00 38.84 2.74
367 4038 3.427773 GCACTGGTACTGTAGTCTGTAGC 60.428 52.174 0.00 7.25 42.55 3.58
368 4039 4.011023 CACTGGTACTGTAGTCTGTAGCT 58.989 47.826 12.70 0.00 42.62 3.32
369 4040 4.011023 ACTGGTACTGTAGTCTGTAGCTG 58.989 47.826 0.00 14.29 42.62 4.24
370 4041 4.011023 CTGGTACTGTAGTCTGTAGCTGT 58.989 47.826 0.00 0.00 42.62 4.40
371 4042 4.008330 TGGTACTGTAGTCTGTAGCTGTC 58.992 47.826 0.00 0.00 42.62 3.51
372 4043 4.263374 TGGTACTGTAGTCTGTAGCTGTCT 60.263 45.833 0.00 0.00 42.62 3.41
373 4044 5.046087 TGGTACTGTAGTCTGTAGCTGTCTA 60.046 44.000 0.00 0.00 42.62 2.59
374 4045 5.879223 GGTACTGTAGTCTGTAGCTGTCTAA 59.121 44.000 0.00 0.00 40.63 2.10
375 4046 6.373774 GGTACTGTAGTCTGTAGCTGTCTAAA 59.626 42.308 0.00 0.00 40.63 1.85
376 4047 7.067251 GGTACTGTAGTCTGTAGCTGTCTAAAT 59.933 40.741 0.00 0.00 40.63 1.40
377 4048 7.469537 ACTGTAGTCTGTAGCTGTCTAAATT 57.530 36.000 0.00 0.00 0.00 1.82
378 4049 7.897864 ACTGTAGTCTGTAGCTGTCTAAATTT 58.102 34.615 0.00 0.00 0.00 1.82
379 4050 9.021807 ACTGTAGTCTGTAGCTGTCTAAATTTA 57.978 33.333 0.00 0.00 0.00 1.40
380 4051 9.509855 CTGTAGTCTGTAGCTGTCTAAATTTAG 57.490 37.037 17.60 17.60 0.00 1.85
381 4052 7.974501 TGTAGTCTGTAGCTGTCTAAATTTAGC 59.025 37.037 18.68 10.92 36.45 3.09
383 4054 7.616313 AGTCTGTAGCTGTCTAAATTTAGCTT 58.384 34.615 18.68 6.27 43.49 3.74
384 4055 7.547370 AGTCTGTAGCTGTCTAAATTTAGCTTG 59.453 37.037 18.68 11.84 43.49 4.01
385 4056 7.332182 GTCTGTAGCTGTCTAAATTTAGCTTGT 59.668 37.037 18.68 6.33 43.49 3.16
386 4057 7.545965 TCTGTAGCTGTCTAAATTTAGCTTGTC 59.454 37.037 18.68 10.27 43.49 3.18
387 4058 7.386851 TGTAGCTGTCTAAATTTAGCTTGTCT 58.613 34.615 18.68 13.38 43.49 3.41
388 4059 6.976636 AGCTGTCTAAATTTAGCTTGTCTC 57.023 37.500 18.68 5.71 43.49 3.36
389 4060 6.467677 AGCTGTCTAAATTTAGCTTGTCTCA 58.532 36.000 18.68 8.75 43.49 3.27
390 4061 6.936900 AGCTGTCTAAATTTAGCTTGTCTCAA 59.063 34.615 18.68 0.00 43.49 3.02
391 4062 7.445402 AGCTGTCTAAATTTAGCTTGTCTCAAA 59.555 33.333 18.68 0.00 43.49 2.69
392 4063 8.076178 GCTGTCTAAATTTAGCTTGTCTCAAAA 58.924 33.333 18.68 0.00 33.53 2.44
393 4064 9.950680 CTGTCTAAATTTAGCTTGTCTCAAAAA 57.049 29.630 18.68 0.00 0.00 1.94
464 4135 6.380079 AGTTAGATATTCTATGCAAGGGGG 57.620 41.667 0.00 0.00 0.00 5.40
477 4148 3.053896 GGGGGCGGTCAAAACTCG 61.054 66.667 0.00 0.00 0.00 4.18
478 4149 3.053896 GGGGCGGTCAAAACTCGG 61.054 66.667 0.00 0.00 0.00 4.63
513 4184 1.129437 GCCAGAAACATTCAGCTCGAC 59.871 52.381 0.00 0.00 0.00 4.20
514 4185 1.734465 CCAGAAACATTCAGCTCGACC 59.266 52.381 0.00 0.00 0.00 4.79
515 4186 2.416747 CAGAAACATTCAGCTCGACCA 58.583 47.619 0.00 0.00 0.00 4.02
516 4187 3.005554 CAGAAACATTCAGCTCGACCAT 58.994 45.455 0.00 0.00 0.00 3.55
517 4188 3.005554 AGAAACATTCAGCTCGACCATG 58.994 45.455 0.00 0.00 0.00 3.66
518 4189 1.742761 AACATTCAGCTCGACCATGG 58.257 50.000 11.19 11.19 0.00 3.66
520 4191 1.134580 ACATTCAGCTCGACCATGGAG 60.135 52.381 21.47 12.28 34.62 3.86
521 4192 1.137675 CATTCAGCTCGACCATGGAGA 59.862 52.381 21.47 16.04 33.27 3.71
522 4193 1.489481 TTCAGCTCGACCATGGAGAT 58.511 50.000 21.47 0.17 33.27 2.75
523 4194 1.035923 TCAGCTCGACCATGGAGATC 58.964 55.000 21.47 12.72 33.27 2.75
524 4195 0.033228 CAGCTCGACCATGGAGATCC 59.967 60.000 21.47 10.86 33.27 3.36
525 4196 1.118356 AGCTCGACCATGGAGATCCC 61.118 60.000 21.47 8.61 33.27 3.85
572 4243 7.256190 CCATGGAGATTCTCAAATGGCATTATT 60.256 37.037 23.88 0.00 38.48 1.40
573 4244 7.046292 TGGAGATTCTCAAATGGCATTATTG 57.954 36.000 14.05 9.33 31.08 1.90
591 4262 9.442033 GCATTATTGTAAGTTTATAACGGAACC 57.558 33.333 0.00 0.00 36.23 3.62
604 4275 1.489230 ACGGAACCTCACAAAAGACCT 59.511 47.619 0.00 0.00 0.00 3.85
643 4321 0.740868 TCTCGCCTCTCCGCAAAATG 60.741 55.000 0.00 0.00 0.00 2.32
650 4328 2.357009 CCTCTCCGCAAAATGGATTCAG 59.643 50.000 0.00 0.00 34.32 3.02
658 4336 4.922692 CGCAAAATGGATTCAGTGCTAAAA 59.077 37.500 5.76 0.00 31.15 1.52
663 4345 6.757897 AATGGATTCAGTGCTAAAAATCGA 57.242 33.333 0.00 0.00 0.00 3.59
664 4346 6.757897 ATGGATTCAGTGCTAAAAATCGAA 57.242 33.333 0.00 0.00 0.00 3.71
665 4347 5.938322 TGGATTCAGTGCTAAAAATCGAAC 58.062 37.500 0.00 0.00 0.00 3.95
666 4348 5.471797 TGGATTCAGTGCTAAAAATCGAACA 59.528 36.000 0.00 0.00 0.00 3.18
667 4349 5.795441 GGATTCAGTGCTAAAAATCGAACAC 59.205 40.000 0.00 0.00 0.00 3.32
668 4350 5.743026 TTCAGTGCTAAAAATCGAACACA 57.257 34.783 0.00 0.00 0.00 3.72
669 4351 5.743026 TCAGTGCTAAAAATCGAACACAA 57.257 34.783 0.00 0.00 0.00 3.33
670 4352 6.125327 TCAGTGCTAAAAATCGAACACAAA 57.875 33.333 0.00 0.00 0.00 2.83
671 4353 5.968848 TCAGTGCTAAAAATCGAACACAAAC 59.031 36.000 0.00 0.00 0.00 2.93
672 4354 5.971202 CAGTGCTAAAAATCGAACACAAACT 59.029 36.000 0.00 0.00 0.00 2.66
673 4355 6.472163 CAGTGCTAAAAATCGAACACAAACTT 59.528 34.615 0.00 0.00 0.00 2.66
674 4356 7.009174 CAGTGCTAAAAATCGAACACAAACTTT 59.991 33.333 0.00 0.00 0.00 2.66
675 4357 7.544217 AGTGCTAAAAATCGAACACAAACTTTT 59.456 29.630 0.00 0.00 0.00 2.27
676 4358 8.166066 GTGCTAAAAATCGAACACAAACTTTTT 58.834 29.630 6.95 6.95 32.43 1.94
677 4359 8.376942 TGCTAAAAATCGAACACAAACTTTTTC 58.623 29.630 5.41 0.00 30.83 2.29
678 4360 8.376942 GCTAAAAATCGAACACAAACTTTTTCA 58.623 29.630 5.41 0.00 30.83 2.69
698 4380 9.781834 TTTTTCAATAACACAAACTCACTAGTG 57.218 29.630 17.17 17.17 35.62 2.74
732 4414 0.670546 CAGGGCATTCGACGTCAAGT 60.671 55.000 17.16 0.00 0.00 3.16
739 4421 0.038892 TTCGACGTCAAGTACCAGCC 60.039 55.000 17.16 0.00 0.00 4.85
754 4436 1.671979 CAGCCGATGTCATCAACCAT 58.328 50.000 13.22 0.00 0.00 3.55
755 4437 1.600957 CAGCCGATGTCATCAACCATC 59.399 52.381 13.22 0.00 35.26 3.51
766 4448 4.579340 GTCATCAACCATCTCATGCTCAAT 59.421 41.667 0.00 0.00 0.00 2.57
767 4449 5.761726 GTCATCAACCATCTCATGCTCAATA 59.238 40.000 0.00 0.00 0.00 1.90
770 4452 7.605309 TCATCAACCATCTCATGCTCAATATAC 59.395 37.037 0.00 0.00 0.00 1.47
790 4472 4.783959 ACGAAAACAAACTACGAAGGAC 57.216 40.909 0.00 0.00 0.00 3.85
797 4479 3.251571 CAAACTACGAAGGACTAGCACC 58.748 50.000 0.00 0.00 0.00 5.01
814 4496 0.881600 ACCGCCTTGTAAACACCGAC 60.882 55.000 0.00 0.00 0.00 4.79
875 4557 4.321304 CGGTTATCACTAATCGGCTCTGAT 60.321 45.833 0.00 0.00 37.72 2.90
890 4593 2.103094 CTCTGATTCACCCGGCTAATCA 59.897 50.000 17.92 17.92 37.30 2.57
951 4654 3.873952 GGAGTCATGTAACCTGAATCAGC 59.126 47.826 4.40 0.00 38.98 4.26
963 4666 1.475280 TGAATCAGCTGAATGCCTTGC 59.525 47.619 22.50 1.61 44.23 4.01
974 4677 3.426568 GCCTTGCCGACTGTCAGC 61.427 66.667 9.03 9.03 0.00 4.26
984 4687 1.024271 GACTGTCAGCTGCCAAACAA 58.976 50.000 9.47 0.00 0.00 2.83
988 4691 3.118665 ACTGTCAGCTGCCAAACAAATTT 60.119 39.130 9.47 0.00 0.00 1.82
993 4696 1.881925 GCTGCCAAACAAATTTCCCCC 60.882 52.381 0.00 0.00 0.00 5.40
994 4697 0.394565 TGCCAAACAAATTTCCCCCG 59.605 50.000 0.00 0.00 0.00 5.73
996 4699 0.321210 CCAAACAAATTTCCCCCGCC 60.321 55.000 0.00 0.00 0.00 6.13
997 4700 0.394565 CAAACAAATTTCCCCCGCCA 59.605 50.000 0.00 0.00 0.00 5.69
1051 4762 0.876342 GGCTCGTTCGGCTAATCCTG 60.876 60.000 5.89 0.00 0.00 3.86
1056 4767 1.405821 CGTTCGGCTAATCCTGTCTCT 59.594 52.381 0.00 0.00 0.00 3.10
1059 4770 4.261656 CGTTCGGCTAATCCTGTCTCTAAT 60.262 45.833 0.00 0.00 0.00 1.73
1082 4793 3.456277 GGGACTGGAGACAATTACTGGAT 59.544 47.826 0.00 0.00 42.06 3.41
1172 4883 3.733960 GGCGGTTCCGAACAAGGC 61.734 66.667 15.69 13.56 0.00 4.35
1173 4884 4.084888 GCGGTTCCGAACAAGGCG 62.085 66.667 15.69 8.18 0.00 5.52
1201 4915 3.675619 AAATTCCTCCCCGGCGTCG 62.676 63.158 0.29 0.29 0.00 5.12
1449 5175 0.032952 TTGGTGAGTGCGTCTGGTAC 59.967 55.000 0.00 0.00 0.00 3.34
1494 5220 3.187700 ACTCCGCAAGAAACGATGATAC 58.812 45.455 0.00 0.00 43.02 2.24
1495 5221 2.540101 CTCCGCAAGAAACGATGATACC 59.460 50.000 0.00 0.00 43.02 2.73
1496 5222 1.597663 CCGCAAGAAACGATGATACCC 59.402 52.381 0.00 0.00 43.02 3.69
1497 5223 2.550978 CGCAAGAAACGATGATACCCT 58.449 47.619 0.00 0.00 43.02 4.34
1498 5224 2.540101 CGCAAGAAACGATGATACCCTC 59.460 50.000 0.00 0.00 43.02 4.30
1499 5225 2.872858 GCAAGAAACGATGATACCCTCC 59.127 50.000 0.00 0.00 0.00 4.30
1506 5232 1.345741 CGATGATACCCTCCATGCTGT 59.654 52.381 0.00 0.00 0.00 4.40
1534 5260 6.072112 TGATCGGGTTAATTACGTACTACC 57.928 41.667 0.00 0.42 0.00 3.18
1535 5261 5.592282 TGATCGGGTTAATTACGTACTACCA 59.408 40.000 13.43 0.00 0.00 3.25
1548 5290 8.861033 TTACGTACTACCAGTGCTTATTATTG 57.139 34.615 0.00 0.00 0.00 1.90
1549 5291 5.751990 ACGTACTACCAGTGCTTATTATTGC 59.248 40.000 0.00 0.00 0.00 3.56
1550 5292 5.107989 CGTACTACCAGTGCTTATTATTGCG 60.108 44.000 0.00 0.00 0.00 4.85
1551 5293 4.766375 ACTACCAGTGCTTATTATTGCGT 58.234 39.130 0.00 0.00 0.00 5.24
1552 5294 4.570772 ACTACCAGTGCTTATTATTGCGTG 59.429 41.667 0.00 0.00 0.00 5.34
1573 5315 1.686325 TTAGTCCCCTCCATGCTCGC 61.686 60.000 0.00 0.00 0.00 5.03
1587 5329 3.035576 CTCGCTGTGACGCCTCGTA 62.036 63.158 0.00 0.00 41.37 3.43
1623 5365 4.217767 GGGATTGTGTTCTCCTTTGTAACC 59.782 45.833 0.00 0.00 0.00 2.85
1625 5367 3.823281 TGTGTTCTCCTTTGTAACCGA 57.177 42.857 0.00 0.00 0.00 4.69
1651 5396 4.737054 CATGTAAGGTTTGCTGGATTCAC 58.263 43.478 0.00 0.00 0.00 3.18
1655 5400 2.242043 AGGTTTGCTGGATTCACAAGG 58.758 47.619 0.00 0.00 0.00 3.61
1665 5410 4.588899 TGGATTCACAAGGGACTGTATTG 58.411 43.478 0.02 0.02 40.86 1.90
1666 5411 4.288366 TGGATTCACAAGGGACTGTATTGA 59.712 41.667 6.82 0.00 40.86 2.57
1667 5412 5.044919 TGGATTCACAAGGGACTGTATTGAT 60.045 40.000 6.82 0.00 40.86 2.57
1686 5431 2.732289 CTGGTGGTTTCCAGTTGGG 58.268 57.895 4.75 0.00 46.92 4.12
1729 5486 2.360165 GGTGGATTGAGATCATTGGTGC 59.640 50.000 0.00 0.00 33.77 5.01
1750 5507 2.724690 CGTGAGACCAAAGAACTACACG 59.275 50.000 0.00 0.00 42.21 4.49
1779 5540 9.997482 TTTACAACTAATGACTTGACAAACTTC 57.003 29.630 0.00 0.00 0.00 3.01
1785 5546 0.822121 ACTTGACAAACTTCCCGGGC 60.822 55.000 18.49 0.00 0.00 6.13
1786 5547 0.537371 CTTGACAAACTTCCCGGGCT 60.537 55.000 18.49 0.00 0.00 5.19
1787 5548 0.106419 TTGACAAACTTCCCGGGCTT 60.106 50.000 18.49 3.49 0.00 4.35
1813 5574 2.813908 AATCCGAACGGCGCTGAC 60.814 61.111 25.98 15.15 39.11 3.51
1824 5585 1.132640 GCGCTGACCAAACGATGTC 59.867 57.895 0.00 0.00 0.00 3.06
1827 5588 1.234821 GCTGACCAAACGATGTCCAA 58.765 50.000 0.00 0.00 0.00 3.53
1847 5608 5.780793 TCCAAAACTTAGGACTCTCTTAGCT 59.219 40.000 0.00 0.00 0.00 3.32
1855 5616 1.202582 GACTCTCTTAGCTGGCGAACA 59.797 52.381 0.00 0.00 0.00 3.18
1878 5639 0.749049 GCTGGAAGGGATGGCATTTC 59.251 55.000 0.00 1.26 0.00 2.17
1879 5640 1.961435 GCTGGAAGGGATGGCATTTCA 60.961 52.381 0.00 0.00 0.00 2.69
1889 5650 3.547468 GGATGGCATTTCAAACGATTTCG 59.453 43.478 0.00 0.00 46.33 3.46
1891 5652 2.030363 TGGCATTTCAAACGATTTCGCT 60.030 40.909 0.00 0.00 44.43 4.93
1892 5653 3.189495 TGGCATTTCAAACGATTTCGCTA 59.811 39.130 0.00 0.00 44.43 4.26
1893 5654 3.542310 GGCATTTCAAACGATTTCGCTAC 59.458 43.478 0.00 0.00 44.43 3.58
1894 5655 3.542310 GCATTTCAAACGATTTCGCTACC 59.458 43.478 0.00 0.00 44.43 3.18
1895 5656 4.717991 CATTTCAAACGATTTCGCTACCA 58.282 39.130 0.00 0.00 44.43 3.25
1902 5663 6.148150 TCAAACGATTTCGCTACCAGTTTTAT 59.852 34.615 0.00 0.00 44.43 1.40
1923 5684 4.715534 TTTGTGAGGGGATGACAACTTA 57.284 40.909 0.00 0.00 29.44 2.24
1926 5687 4.588899 TGTGAGGGGATGACAACTTATTG 58.411 43.478 0.00 0.00 41.98 1.90
1949 5710 5.477291 TGTAAACAACAAGGTGGTTTCTTCA 59.523 36.000 5.21 2.63 38.75 3.02
1980 5749 5.290158 GGCATTTTCGTTACTCTCATCGTTA 59.710 40.000 0.00 0.00 0.00 3.18
1986 5755 8.429493 TTTCGTTACTCTCATCGTTAGATCTA 57.571 34.615 0.00 0.00 34.23 1.98
2014 5784 5.133221 AGCAACTACAACTGTGAGGAAAAT 58.867 37.500 0.00 0.00 0.00 1.82
2033 5805 2.514824 GCTCACTTGCGATCCCCC 60.515 66.667 0.00 0.00 0.00 5.40
2038 5810 3.089874 CTTGCGATCCCCCTCCCA 61.090 66.667 0.00 0.00 0.00 4.37
2060 5832 1.654105 CTGACGTTCGCCAGATAACAC 59.346 52.381 2.59 0.00 32.37 3.32
2101 5873 9.883142 TTTCCTTTTTGCTCAAGAAAAATAAGA 57.117 25.926 0.00 0.00 32.94 2.10
2119 5891 9.810231 AAAATAAGAAAATTTATGCGTTGCAAG 57.190 25.926 0.00 0.00 43.62 4.01
2120 5892 4.908966 AGAAAATTTATGCGTTGCAAGC 57.091 36.364 0.00 6.66 43.62 4.01
2126 5898 3.826221 TGCGTTGCAAGCAGAGTT 58.174 50.000 16.36 0.00 40.01 3.01
2127 5899 2.999356 TGCGTTGCAAGCAGAGTTA 58.001 47.368 16.36 0.00 40.01 2.24
2128 5900 1.304254 TGCGTTGCAAGCAGAGTTAA 58.696 45.000 16.36 0.00 40.01 2.01
2129 5901 1.673400 TGCGTTGCAAGCAGAGTTAAA 59.327 42.857 16.36 0.00 40.01 1.52
2130 5902 2.098280 TGCGTTGCAAGCAGAGTTAAAA 59.902 40.909 16.36 0.00 40.01 1.52
2131 5903 3.112580 GCGTTGCAAGCAGAGTTAAAAA 58.887 40.909 0.00 0.00 34.19 1.94
2132 5904 3.735746 GCGTTGCAAGCAGAGTTAAAAAT 59.264 39.130 0.00 0.00 34.19 1.82
2133 5905 4.209080 GCGTTGCAAGCAGAGTTAAAAATT 59.791 37.500 0.00 0.00 34.19 1.82
2134 5906 5.276820 GCGTTGCAAGCAGAGTTAAAAATTT 60.277 36.000 0.00 0.00 34.19 1.82
2135 5907 6.347110 CGTTGCAAGCAGAGTTAAAAATTTC 58.653 36.000 0.00 0.00 0.00 2.17
2136 5908 6.019961 CGTTGCAAGCAGAGTTAAAAATTTCA 60.020 34.615 0.00 0.00 0.00 2.69
2137 5909 7.463913 CGTTGCAAGCAGAGTTAAAAATTTCAA 60.464 33.333 0.00 0.00 0.00 2.69
2138 5910 7.232945 TGCAAGCAGAGTTAAAAATTTCAAC 57.767 32.000 7.28 7.28 0.00 3.18
2139 5911 6.019961 TGCAAGCAGAGTTAAAAATTTCAACG 60.020 34.615 8.97 0.00 0.00 4.10
2140 5912 6.198216 GCAAGCAGAGTTAAAAATTTCAACGA 59.802 34.615 8.97 0.00 0.00 3.85
2141 5913 7.253950 GCAAGCAGAGTTAAAAATTTCAACGAA 60.254 33.333 8.97 0.00 0.00 3.85
2142 5914 8.591312 CAAGCAGAGTTAAAAATTTCAACGAAA 58.409 29.630 8.97 0.00 35.94 3.46
2143 5915 8.871686 AGCAGAGTTAAAAATTTCAACGAAAT 57.128 26.923 8.97 0.00 43.07 2.17
2154 5926 5.828299 TTTCAACGAAATTTCAGTGGAGT 57.172 34.783 17.99 3.90 0.00 3.85
2155 5927 5.418310 TTCAACGAAATTTCAGTGGAGTC 57.582 39.130 17.99 0.00 0.00 3.36
2156 5928 4.703897 TCAACGAAATTTCAGTGGAGTCT 58.296 39.130 17.99 0.00 0.00 3.24
2157 5929 4.511454 TCAACGAAATTTCAGTGGAGTCTG 59.489 41.667 17.99 10.14 36.85 3.51
2158 5930 4.336889 ACGAAATTTCAGTGGAGTCTGA 57.663 40.909 17.99 0.00 41.85 3.27
2171 5943 9.793259 TCAGTGGAGTCTGAAATATTTTTAACT 57.207 29.630 1.43 6.14 40.82 2.24
2173 5945 9.232473 AGTGGAGTCTGAAATATTTTTAACTCC 57.768 33.333 28.59 28.59 42.52 3.85
2174 5946 9.010029 GTGGAGTCTGAAATATTTTTAACTCCA 57.990 33.333 31.12 31.12 45.40 3.86
2175 5947 9.581289 TGGAGTCTGAAATATTTTTAACTCCAA 57.419 29.630 31.83 23.36 45.08 3.53
2187 5959 8.744568 ATTTTTAACTCCAAAATTTTGAGGCA 57.255 26.923 28.44 13.95 40.55 4.75
2188 5960 8.744568 TTTTTAACTCCAAAATTTTGAGGCAT 57.255 26.923 28.44 14.35 40.55 4.40
2189 5961 9.838339 TTTTTAACTCCAAAATTTTGAGGCATA 57.162 25.926 28.44 13.52 40.55 3.14
2192 5964 9.651913 TTAACTCCAAAATTTTGAGGCATATTC 57.348 29.630 28.44 0.00 40.55 1.75
2193 5965 6.332630 ACTCCAAAATTTTGAGGCATATTCG 58.667 36.000 28.44 10.46 40.55 3.34
2194 5966 6.152661 ACTCCAAAATTTTGAGGCATATTCGA 59.847 34.615 28.44 13.64 40.55 3.71
2195 5967 6.929625 TCCAAAATTTTGAGGCATATTCGAA 58.070 32.000 28.44 0.00 40.55 3.71
2196 5968 7.382110 TCCAAAATTTTGAGGCATATTCGAAA 58.618 30.769 28.44 0.00 40.55 3.46
2197 5969 8.040132 TCCAAAATTTTGAGGCATATTCGAAAT 58.960 29.630 28.44 0.00 39.29 2.17
2198 5970 8.117988 CCAAAATTTTGAGGCATATTCGAAATG 58.882 33.333 28.44 8.76 38.21 2.32
2199 5971 8.871862 CAAAATTTTGAGGCATATTCGAAATGA 58.128 29.630 23.72 3.12 38.21 2.57
2200 5972 9.603921 AAAATTTTGAGGCATATTCGAAATGAT 57.396 25.926 18.43 9.69 38.21 2.45
2201 5973 9.603921 AAATTTTGAGGCATATTCGAAATGATT 57.396 25.926 18.43 9.19 38.21 2.57
2202 5974 9.603921 AATTTTGAGGCATATTCGAAATGATTT 57.396 25.926 18.43 0.00 38.21 2.17
2203 5975 8.633075 TTTTGAGGCATATTCGAAATGATTTC 57.367 30.769 18.43 7.83 36.32 2.17
2204 5976 6.940831 TGAGGCATATTCGAAATGATTTCA 57.059 33.333 17.14 14.90 39.63 2.69
2205 5977 7.332213 TGAGGCATATTCGAAATGATTTCAA 57.668 32.000 17.14 10.80 39.63 2.69
2206 5978 7.770201 TGAGGCATATTCGAAATGATTTCAAA 58.230 30.769 17.14 6.24 39.63 2.69
2207 5979 8.249638 TGAGGCATATTCGAAATGATTTCAAAA 58.750 29.630 17.14 10.94 39.63 2.44
2208 5980 9.086336 GAGGCATATTCGAAATGATTTCAAAAA 57.914 29.630 17.14 8.75 39.63 1.94
2263 6035 6.753897 AGTGAAATTTGAAATCTGAAACGC 57.246 33.333 0.00 0.00 0.00 4.84
2264 6036 6.272318 AGTGAAATTTGAAATCTGAAACGCA 58.728 32.000 0.00 0.00 0.00 5.24
2265 6037 6.756074 AGTGAAATTTGAAATCTGAAACGCAA 59.244 30.769 0.00 0.00 0.00 4.85
2266 6038 7.277539 AGTGAAATTTGAAATCTGAAACGCAAA 59.722 29.630 0.00 0.00 0.00 3.68
2267 6039 7.902403 GTGAAATTTGAAATCTGAAACGCAAAA 59.098 29.630 0.00 0.00 0.00 2.44
2268 6040 8.446273 TGAAATTTGAAATCTGAAACGCAAAAA 58.554 25.926 0.00 0.00 0.00 1.94
2269 6041 9.437045 GAAATTTGAAATCTGAAACGCAAAAAT 57.563 25.926 0.00 0.00 0.00 1.82
2276 6048 9.528847 GAAATCTGAAACGCAAAAATAATTTCC 57.471 29.630 0.00 0.00 0.00 3.13
2277 6049 6.683090 TCTGAAACGCAAAAATAATTTCCG 57.317 33.333 0.00 0.00 32.65 4.30
2278 6050 6.439599 TCTGAAACGCAAAAATAATTTCCGA 58.560 32.000 4.05 0.00 31.58 4.55
2279 6051 6.918569 TCTGAAACGCAAAAATAATTTCCGAA 59.081 30.769 4.05 0.00 31.58 4.30
2280 6052 7.435488 TCTGAAACGCAAAAATAATTTCCGAAA 59.565 29.630 0.00 0.00 31.58 3.46
2281 6053 8.077836 TGAAACGCAAAAATAATTTCCGAAAT 57.922 26.923 0.17 0.17 31.58 2.17
2282 6054 9.193133 TGAAACGCAAAAATAATTTCCGAAATA 57.807 25.926 6.79 0.00 31.58 1.40
2283 6055 9.455559 GAAACGCAAAAATAATTTCCGAAATAC 57.544 29.630 6.79 0.00 31.58 1.89
2284 6056 7.199898 ACGCAAAAATAATTTCCGAAATACG 57.800 32.000 6.79 4.55 42.18 3.06
2285 6057 6.802834 ACGCAAAAATAATTTCCGAAATACGT 59.197 30.769 6.79 0.00 40.78 3.57
2286 6058 7.326547 ACGCAAAAATAATTTCCGAAATACGTT 59.673 29.630 6.79 0.76 40.78 3.99
2287 6059 8.786955 CGCAAAAATAATTTCCGAAATACGTTA 58.213 29.630 6.79 0.00 40.78 3.18
2316 6088 8.978564 TTCTGAATTTTTGCATATTTAAGCGA 57.021 26.923 0.00 0.00 0.00 4.93
2317 6089 8.619146 TCTGAATTTTTGCATATTTAAGCGAG 57.381 30.769 0.00 0.00 0.00 5.03
2318 6090 7.701924 TCTGAATTTTTGCATATTTAAGCGAGG 59.298 33.333 0.00 0.00 0.00 4.63
2319 6091 7.319646 TGAATTTTTGCATATTTAAGCGAGGT 58.680 30.769 0.00 0.00 0.00 3.85
2320 6092 7.487829 TGAATTTTTGCATATTTAAGCGAGGTC 59.512 33.333 0.00 0.00 0.00 3.85
2321 6093 4.893424 TTTGCATATTTAAGCGAGGTCC 57.107 40.909 0.00 0.00 0.00 4.46
2322 6094 2.479837 TGCATATTTAAGCGAGGTCCG 58.520 47.619 0.00 0.00 42.21 4.79
2323 6095 2.101750 TGCATATTTAAGCGAGGTCCGA 59.898 45.455 0.00 0.00 41.76 4.55
2324 6096 3.128349 GCATATTTAAGCGAGGTCCGAA 58.872 45.455 0.00 0.00 41.76 4.30
2325 6097 3.558418 GCATATTTAAGCGAGGTCCGAAA 59.442 43.478 0.00 0.00 41.76 3.46
2326 6098 4.213482 GCATATTTAAGCGAGGTCCGAAAT 59.787 41.667 0.00 0.00 41.76 2.17
2327 6099 5.277828 GCATATTTAAGCGAGGTCCGAAATT 60.278 40.000 0.00 0.00 41.76 1.82
2328 6100 6.073440 GCATATTTAAGCGAGGTCCGAAATTA 60.073 38.462 0.00 0.00 41.76 1.40
2329 6101 7.360946 GCATATTTAAGCGAGGTCCGAAATTAT 60.361 37.037 0.00 0.00 41.76 1.28
2330 6102 9.146984 CATATTTAAGCGAGGTCCGAAATTATA 57.853 33.333 0.00 0.00 41.76 0.98
2331 6103 9.886132 ATATTTAAGCGAGGTCCGAAATTATAT 57.114 29.630 0.00 0.00 41.76 0.86
2332 6104 8.617290 ATTTAAGCGAGGTCCGAAATTATATT 57.383 30.769 0.00 0.00 41.76 1.28
2333 6105 7.647907 TTAAGCGAGGTCCGAAATTATATTC 57.352 36.000 0.00 0.00 41.76 1.75
2334 6106 5.470047 AGCGAGGTCCGAAATTATATTCT 57.530 39.130 0.00 0.00 41.76 2.40
2335 6107 5.855045 AGCGAGGTCCGAAATTATATTCTT 58.145 37.500 0.00 0.00 41.76 2.52
2336 6108 6.289064 AGCGAGGTCCGAAATTATATTCTTT 58.711 36.000 0.00 0.00 41.76 2.52
2337 6109 6.424207 AGCGAGGTCCGAAATTATATTCTTTC 59.576 38.462 0.00 0.00 41.76 2.62
2338 6110 6.347483 GCGAGGTCCGAAATTATATTCTTTCC 60.347 42.308 0.00 0.00 41.76 3.13
2339 6111 6.128902 CGAGGTCCGAAATTATATTCTTTCCG 60.129 42.308 0.00 0.00 41.76 4.30
2340 6112 6.823497 AGGTCCGAAATTATATTCTTTCCGA 58.177 36.000 0.00 2.38 0.00 4.55
2341 6113 7.277396 AGGTCCGAAATTATATTCTTTCCGAA 58.723 34.615 0.00 0.00 35.78 4.30
2342 6114 7.771826 AGGTCCGAAATTATATTCTTTCCGAAA 59.228 33.333 0.00 0.00 34.79 3.46
2343 6115 8.565416 GGTCCGAAATTATATTCTTTCCGAAAT 58.435 33.333 0.00 0.00 34.79 2.17
2344 6116 9.946165 GTCCGAAATTATATTCTTTCCGAAATT 57.054 29.630 0.00 0.00 34.79 1.82
2355 6127 8.601845 ATTCTTTCCGAAATTAAAAACCTTGG 57.398 30.769 0.00 0.00 34.79 3.61
2361 6133 5.277106 CCGAAATTAAAAACCTTGGTTGCAC 60.277 40.000 5.74 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.181521 GGGACGAAAATAAACCCGTAACG 60.182 47.826 0.00 0.00 35.22 3.18
14 15 3.750652 TGGGACGAAAATAAACCCGTAAC 59.249 43.478 0.00 0.00 43.04 2.50
15 16 3.750652 GTGGGACGAAAATAAACCCGTAA 59.249 43.478 0.00 0.00 43.04 3.18
16 17 3.333804 GTGGGACGAAAATAAACCCGTA 58.666 45.455 0.00 0.00 43.04 4.02
17 18 2.153645 GTGGGACGAAAATAAACCCGT 58.846 47.619 0.00 0.00 43.04 5.28
18 19 1.469703 GGTGGGACGAAAATAAACCCG 59.530 52.381 0.00 0.00 43.04 5.28
19 20 2.799017 AGGTGGGACGAAAATAAACCC 58.201 47.619 0.00 0.00 40.79 4.11
20 21 3.192001 GGAAGGTGGGACGAAAATAAACC 59.808 47.826 0.00 0.00 0.00 3.27
21 22 3.120095 CGGAAGGTGGGACGAAAATAAAC 60.120 47.826 0.00 0.00 0.00 2.01
22 23 3.075884 CGGAAGGTGGGACGAAAATAAA 58.924 45.455 0.00 0.00 0.00 1.40
23 24 2.302445 TCGGAAGGTGGGACGAAAATAA 59.698 45.455 0.00 0.00 31.79 1.40
24 25 1.901159 TCGGAAGGTGGGACGAAAATA 59.099 47.619 0.00 0.00 31.79 1.40
25 26 0.688487 TCGGAAGGTGGGACGAAAAT 59.312 50.000 0.00 0.00 31.79 1.82
26 27 0.034337 CTCGGAAGGTGGGACGAAAA 59.966 55.000 0.00 0.00 34.70 2.29
27 28 1.117142 ACTCGGAAGGTGGGACGAAA 61.117 55.000 0.00 0.00 34.70 3.46
28 29 1.532316 ACTCGGAAGGTGGGACGAA 60.532 57.895 0.00 0.00 34.70 3.85
29 30 2.116772 ACTCGGAAGGTGGGACGA 59.883 61.111 0.00 0.00 0.00 4.20
30 31 2.214181 CTCACTCGGAAGGTGGGACG 62.214 65.000 0.00 0.00 35.58 4.79
31 32 1.592223 CTCACTCGGAAGGTGGGAC 59.408 63.158 0.00 0.00 35.58 4.46
32 33 1.609501 CCTCACTCGGAAGGTGGGA 60.610 63.158 0.00 0.00 35.58 4.37
33 34 2.660064 CCCTCACTCGGAAGGTGGG 61.660 68.421 0.00 2.48 34.44 4.61
34 35 1.608717 CTCCCTCACTCGGAAGGTGG 61.609 65.000 0.00 0.00 34.44 4.61
35 36 0.612174 TCTCCCTCACTCGGAAGGTG 60.612 60.000 0.00 0.00 34.80 4.00
36 37 0.323908 CTCTCCCTCACTCGGAAGGT 60.324 60.000 0.00 0.00 0.00 3.50
37 38 1.040339 CCTCTCCCTCACTCGGAAGG 61.040 65.000 0.00 0.00 0.00 3.46
38 39 1.040339 CCCTCTCCCTCACTCGGAAG 61.040 65.000 0.00 0.00 0.00 3.46
39 40 1.000486 CCCTCTCCCTCACTCGGAA 60.000 63.158 0.00 0.00 0.00 4.30
40 41 2.684104 CCCTCTCCCTCACTCGGA 59.316 66.667 0.00 0.00 0.00 4.55
41 42 2.443016 CCCCTCTCCCTCACTCGG 60.443 72.222 0.00 0.00 0.00 4.63
42 43 2.443016 CCCCCTCTCCCTCACTCG 60.443 72.222 0.00 0.00 0.00 4.18
43 44 1.075600 CTCCCCCTCTCCCTCACTC 60.076 68.421 0.00 0.00 0.00 3.51
44 45 1.547755 TCTCCCCCTCTCCCTCACT 60.548 63.158 0.00 0.00 0.00 3.41
45 46 1.075600 CTCTCCCCCTCTCCCTCAC 60.076 68.421 0.00 0.00 0.00 3.51
46 47 1.230650 TCTCTCCCCCTCTCCCTCA 60.231 63.158 0.00 0.00 0.00 3.86
47 48 0.996762 TCTCTCTCCCCCTCTCCCTC 60.997 65.000 0.00 0.00 0.00 4.30
48 49 0.998945 CTCTCTCTCCCCCTCTCCCT 60.999 65.000 0.00 0.00 0.00 4.20
49 50 1.293683 ACTCTCTCTCCCCCTCTCCC 61.294 65.000 0.00 0.00 0.00 4.30
50 51 0.106217 CACTCTCTCTCCCCCTCTCC 60.106 65.000 0.00 0.00 0.00 3.71
51 52 0.923358 TCACTCTCTCTCCCCCTCTC 59.077 60.000 0.00 0.00 0.00 3.20
52 53 0.926293 CTCACTCTCTCTCCCCCTCT 59.074 60.000 0.00 0.00 0.00 3.69
53 54 0.106217 CCTCACTCTCTCTCCCCCTC 60.106 65.000 0.00 0.00 0.00 4.30
54 55 0.553862 TCCTCACTCTCTCTCCCCCT 60.554 60.000 0.00 0.00 0.00 4.79
55 56 0.336737 TTCCTCACTCTCTCTCCCCC 59.663 60.000 0.00 0.00 0.00 5.40
56 57 1.286553 TCTTCCTCACTCTCTCTCCCC 59.713 57.143 0.00 0.00 0.00 4.81
57 58 2.654863 CTCTTCCTCACTCTCTCTCCC 58.345 57.143 0.00 0.00 0.00 4.30
58 59 2.654863 CCTCTTCCTCACTCTCTCTCC 58.345 57.143 0.00 0.00 0.00 3.71
59 60 2.241176 TCCCTCTTCCTCACTCTCTCTC 59.759 54.545 0.00 0.00 0.00 3.20
60 61 2.242196 CTCCCTCTTCCTCACTCTCTCT 59.758 54.545 0.00 0.00 0.00 3.10
61 62 2.654863 CTCCCTCTTCCTCACTCTCTC 58.345 57.143 0.00 0.00 0.00 3.20
62 63 1.287739 CCTCCCTCTTCCTCACTCTCT 59.712 57.143 0.00 0.00 0.00 3.10
63 64 1.687996 CCCTCCCTCTTCCTCACTCTC 60.688 61.905 0.00 0.00 0.00 3.20
64 65 0.338120 CCCTCCCTCTTCCTCACTCT 59.662 60.000 0.00 0.00 0.00 3.24
65 66 0.336737 TCCCTCCCTCTTCCTCACTC 59.663 60.000 0.00 0.00 0.00 3.51
66 67 0.793617 TTCCCTCCCTCTTCCTCACT 59.206 55.000 0.00 0.00 0.00 3.41
67 68 1.557371 CTTTCCCTCCCTCTTCCTCAC 59.443 57.143 0.00 0.00 0.00 3.51
68 69 1.437149 TCTTTCCCTCCCTCTTCCTCA 59.563 52.381 0.00 0.00 0.00 3.86
69 70 2.115427 CTCTTTCCCTCCCTCTTCCTC 58.885 57.143 0.00 0.00 0.00 3.71
70 71 1.439143 ACTCTTTCCCTCCCTCTTCCT 59.561 52.381 0.00 0.00 0.00 3.36
71 72 1.557371 CACTCTTTCCCTCCCTCTTCC 59.443 57.143 0.00 0.00 0.00 3.46
72 73 2.027653 CACACTCTTTCCCTCCCTCTTC 60.028 54.545 0.00 0.00 0.00 2.87
73 74 1.981495 CACACTCTTTCCCTCCCTCTT 59.019 52.381 0.00 0.00 0.00 2.85
74 75 1.132689 ACACACTCTTTCCCTCCCTCT 60.133 52.381 0.00 0.00 0.00 3.69
75 76 1.002544 CACACACTCTTTCCCTCCCTC 59.997 57.143 0.00 0.00 0.00 4.30
76 77 1.059913 CACACACTCTTTCCCTCCCT 58.940 55.000 0.00 0.00 0.00 4.20
77 78 0.765510 ACACACACTCTTTCCCTCCC 59.234 55.000 0.00 0.00 0.00 4.30
78 79 1.141053 ACACACACACTCTTTCCCTCC 59.859 52.381 0.00 0.00 0.00 4.30
79 80 2.213499 CACACACACACTCTTTCCCTC 58.787 52.381 0.00 0.00 0.00 4.30
80 81 1.559682 ACACACACACACTCTTTCCCT 59.440 47.619 0.00 0.00 0.00 4.20
81 82 1.670811 CACACACACACACTCTTTCCC 59.329 52.381 0.00 0.00 0.00 3.97
82 83 2.627945 TCACACACACACACTCTTTCC 58.372 47.619 0.00 0.00 0.00 3.13
83 84 4.882671 ATTCACACACACACACTCTTTC 57.117 40.909 0.00 0.00 0.00 2.62
84 85 5.182950 TCAAATTCACACACACACACTCTTT 59.817 36.000 0.00 0.00 0.00 2.52
85 86 4.699735 TCAAATTCACACACACACACTCTT 59.300 37.500 0.00 0.00 0.00 2.85
86 87 4.260985 TCAAATTCACACACACACACTCT 58.739 39.130 0.00 0.00 0.00 3.24
87 88 4.614555 TCAAATTCACACACACACACTC 57.385 40.909 0.00 0.00 0.00 3.51
88 89 4.202040 CCATCAAATTCACACACACACACT 60.202 41.667 0.00 0.00 0.00 3.55
89 90 4.043750 CCATCAAATTCACACACACACAC 58.956 43.478 0.00 0.00 0.00 3.82
90 91 3.698539 ACCATCAAATTCACACACACACA 59.301 39.130 0.00 0.00 0.00 3.72
91 92 4.305989 ACCATCAAATTCACACACACAC 57.694 40.909 0.00 0.00 0.00 3.82
92 93 6.456795 TTTACCATCAAATTCACACACACA 57.543 33.333 0.00 0.00 0.00 3.72
93 94 7.763172 TTTTTACCATCAAATTCACACACAC 57.237 32.000 0.00 0.00 0.00 3.82
114 115 6.687081 TTAAGTGACATTGACGACCTTTTT 57.313 33.333 0.00 0.00 0.00 1.94
115 116 6.877611 ATTAAGTGACATTGACGACCTTTT 57.122 33.333 0.00 0.00 0.00 2.27
116 117 7.606456 ACATATTAAGTGACATTGACGACCTTT 59.394 33.333 0.00 0.00 0.00 3.11
117 118 7.103641 ACATATTAAGTGACATTGACGACCTT 58.896 34.615 0.00 0.00 0.00 3.50
118 119 6.640518 ACATATTAAGTGACATTGACGACCT 58.359 36.000 0.00 0.00 0.00 3.85
119 120 6.903883 ACATATTAAGTGACATTGACGACC 57.096 37.500 0.00 0.00 0.00 4.79
120 121 9.244799 TCATACATATTAAGTGACATTGACGAC 57.755 33.333 0.00 0.00 0.00 4.34
121 122 9.463443 CTCATACATATTAAGTGACATTGACGA 57.537 33.333 0.00 0.00 0.00 4.20
122 123 9.463443 TCTCATACATATTAAGTGACATTGACG 57.537 33.333 0.00 0.00 0.00 4.35
179 180 9.267084 GGAGCCACATTAACTTTAAAAATTCAA 57.733 29.630 0.00 0.00 0.00 2.69
180 181 7.596995 CGGAGCCACATTAACTTTAAAAATTCA 59.403 33.333 0.00 0.00 0.00 2.57
181 182 7.597369 ACGGAGCCACATTAACTTTAAAAATTC 59.403 33.333 0.00 0.00 0.00 2.17
182 183 7.438564 ACGGAGCCACATTAACTTTAAAAATT 58.561 30.769 0.00 0.00 0.00 1.82
183 184 6.988522 ACGGAGCCACATTAACTTTAAAAAT 58.011 32.000 0.00 0.00 0.00 1.82
184 185 6.394025 ACGGAGCCACATTAACTTTAAAAA 57.606 33.333 0.00 0.00 0.00 1.94
185 186 6.210078 CAACGGAGCCACATTAACTTTAAAA 58.790 36.000 0.00 0.00 0.00 1.52
186 187 5.764131 CAACGGAGCCACATTAACTTTAAA 58.236 37.500 0.00 0.00 0.00 1.52
187 188 4.320641 GCAACGGAGCCACATTAACTTTAA 60.321 41.667 0.00 0.00 0.00 1.52
188 189 3.189702 GCAACGGAGCCACATTAACTTTA 59.810 43.478 0.00 0.00 0.00 1.85
189 190 2.030274 GCAACGGAGCCACATTAACTTT 60.030 45.455 0.00 0.00 0.00 2.66
190 191 1.539827 GCAACGGAGCCACATTAACTT 59.460 47.619 0.00 0.00 0.00 2.66
191 192 1.165270 GCAACGGAGCCACATTAACT 58.835 50.000 0.00 0.00 0.00 2.24
192 193 0.878416 TGCAACGGAGCCACATTAAC 59.122 50.000 0.00 0.00 0.00 2.01
193 194 1.610363 TTGCAACGGAGCCACATTAA 58.390 45.000 0.00 0.00 0.00 1.40
194 195 1.472082 CATTGCAACGGAGCCACATTA 59.528 47.619 0.00 0.00 0.00 1.90
195 196 0.244450 CATTGCAACGGAGCCACATT 59.756 50.000 0.00 0.00 0.00 2.71
196 197 1.885157 CATTGCAACGGAGCCACAT 59.115 52.632 0.00 0.00 0.00 3.21
197 198 2.918345 GCATTGCAACGGAGCCACA 61.918 57.895 0.00 0.00 0.00 4.17
198 199 2.126346 GCATTGCAACGGAGCCAC 60.126 61.111 0.00 0.00 0.00 5.01
199 200 2.596923 TGCATTGCAACGGAGCCA 60.597 55.556 9.33 0.00 34.76 4.75
200 201 2.126346 GTGCATTGCAACGGAGCC 60.126 61.111 13.94 0.00 41.47 4.70
201 202 1.443194 CAGTGCATTGCAACGGAGC 60.443 57.895 13.94 4.59 41.47 4.70
202 203 0.110056 GTCAGTGCATTGCAACGGAG 60.110 55.000 13.94 2.07 41.47 4.63
203 204 1.840630 CGTCAGTGCATTGCAACGGA 61.841 55.000 20.99 14.79 41.47 4.69
204 205 1.440850 CGTCAGTGCATTGCAACGG 60.441 57.895 20.99 13.14 41.47 4.44
205 206 0.316937 AACGTCAGTGCATTGCAACG 60.317 50.000 24.93 24.93 43.15 4.10
206 207 1.002468 AGAACGTCAGTGCATTGCAAC 60.002 47.619 13.94 7.39 41.47 4.17
207 208 1.308047 AGAACGTCAGTGCATTGCAA 58.692 45.000 13.94 0.00 41.47 4.08
208 209 1.264020 GAAGAACGTCAGTGCATTGCA 59.736 47.619 7.38 7.38 35.60 4.08
209 210 1.532868 AGAAGAACGTCAGTGCATTGC 59.467 47.619 3.97 0.46 0.00 3.56
210 211 3.990469 ACTAGAAGAACGTCAGTGCATTG 59.010 43.478 2.16 2.16 0.00 2.82
211 212 4.258702 ACTAGAAGAACGTCAGTGCATT 57.741 40.909 0.00 0.00 0.00 3.56
212 213 3.944055 ACTAGAAGAACGTCAGTGCAT 57.056 42.857 0.00 0.00 0.00 3.96
213 214 5.161358 CAATACTAGAAGAACGTCAGTGCA 58.839 41.667 0.00 0.00 0.00 4.57
214 215 4.563184 CCAATACTAGAAGAACGTCAGTGC 59.437 45.833 0.00 0.00 0.00 4.40
215 216 5.710984 ACCAATACTAGAAGAACGTCAGTG 58.289 41.667 0.00 0.00 0.00 3.66
216 217 5.979288 ACCAATACTAGAAGAACGTCAGT 57.021 39.130 0.00 0.00 0.00 3.41
217 218 7.974501 ACATTACCAATACTAGAAGAACGTCAG 59.025 37.037 0.00 0.00 0.00 3.51
218 219 7.833786 ACATTACCAATACTAGAAGAACGTCA 58.166 34.615 0.00 0.00 0.00 4.35
219 220 9.962783 ATACATTACCAATACTAGAAGAACGTC 57.037 33.333 0.00 0.00 0.00 4.34
220 221 9.745880 CATACATTACCAATACTAGAAGAACGT 57.254 33.333 0.00 0.00 0.00 3.99
221 222 9.193133 CCATACATTACCAATACTAGAAGAACG 57.807 37.037 0.00 0.00 0.00 3.95
222 223 9.490379 CCCATACATTACCAATACTAGAAGAAC 57.510 37.037 0.00 0.00 0.00 3.01
223 224 8.154856 GCCCATACATTACCAATACTAGAAGAA 58.845 37.037 0.00 0.00 0.00 2.52
224 225 7.512746 AGCCCATACATTACCAATACTAGAAGA 59.487 37.037 0.00 0.00 0.00 2.87
225 226 7.680730 AGCCCATACATTACCAATACTAGAAG 58.319 38.462 0.00 0.00 0.00 2.85
226 227 7.626999 AGCCCATACATTACCAATACTAGAA 57.373 36.000 0.00 0.00 0.00 2.10
227 228 7.954056 AGTAGCCCATACATTACCAATACTAGA 59.046 37.037 0.00 0.00 36.79 2.43
228 229 8.135382 AGTAGCCCATACATTACCAATACTAG 57.865 38.462 0.00 0.00 36.79 2.57
229 230 9.028284 GTAGTAGCCCATACATTACCAATACTA 57.972 37.037 0.00 0.00 36.79 1.82
230 231 7.733501 AGTAGTAGCCCATACATTACCAATACT 59.266 37.037 0.00 0.00 36.79 2.12
231 232 7.904205 AGTAGTAGCCCATACATTACCAATAC 58.096 38.462 0.00 0.00 36.79 1.89
349 4020 4.008330 GACAGCTACAGACTACAGTACCA 58.992 47.826 0.00 0.00 0.00 3.25
360 4031 7.386851 ACAAGCTAAATTTAGACAGCTACAGA 58.613 34.615 26.00 0.00 43.39 3.41
361 4032 7.547370 AGACAAGCTAAATTTAGACAGCTACAG 59.453 37.037 26.00 14.60 43.39 2.74
362 4033 7.386851 AGACAAGCTAAATTTAGACAGCTACA 58.613 34.615 26.00 0.00 43.39 2.74
363 4034 7.545965 TGAGACAAGCTAAATTTAGACAGCTAC 59.454 37.037 26.00 13.85 43.39 3.58
364 4035 7.611770 TGAGACAAGCTAAATTTAGACAGCTA 58.388 34.615 26.00 2.57 43.39 3.32
365 4036 6.467677 TGAGACAAGCTAAATTTAGACAGCT 58.532 36.000 26.00 16.73 46.05 4.24
366 4037 6.727824 TGAGACAAGCTAAATTTAGACAGC 57.272 37.500 26.00 14.81 32.47 4.40
367 4038 9.950680 TTTTTGAGACAAGCTAAATTTAGACAG 57.049 29.630 26.00 16.35 32.47 3.51
395 4066 6.551227 AGGAGAGCTAAATTTGGACAGTTTTT 59.449 34.615 5.63 0.00 0.00 1.94
396 4067 6.071320 AGGAGAGCTAAATTTGGACAGTTTT 58.929 36.000 5.63 0.00 0.00 2.43
397 4068 5.635120 AGGAGAGCTAAATTTGGACAGTTT 58.365 37.500 5.63 0.00 0.00 2.66
398 4069 5.248380 AGGAGAGCTAAATTTGGACAGTT 57.752 39.130 5.63 0.00 0.00 3.16
399 4070 4.917906 AGGAGAGCTAAATTTGGACAGT 57.082 40.909 5.63 0.00 0.00 3.55
400 4071 5.734720 TGTAGGAGAGCTAAATTTGGACAG 58.265 41.667 5.63 0.00 0.00 3.51
401 4072 5.755409 TGTAGGAGAGCTAAATTTGGACA 57.245 39.130 5.63 0.00 0.00 4.02
402 4073 6.587273 AGATGTAGGAGAGCTAAATTTGGAC 58.413 40.000 5.63 0.00 0.00 4.02
403 4074 6.384015 TGAGATGTAGGAGAGCTAAATTTGGA 59.616 38.462 5.63 0.00 0.00 3.53
404 4075 6.586344 TGAGATGTAGGAGAGCTAAATTTGG 58.414 40.000 0.00 0.00 0.00 3.28
405 4076 7.495901 TCTGAGATGTAGGAGAGCTAAATTTG 58.504 38.462 0.00 0.00 0.00 2.32
438 4109 8.383175 CCCCCTTGCATAGAATATCTAACTAAA 58.617 37.037 0.00 0.00 31.96 1.85
439 4110 7.528881 GCCCCCTTGCATAGAATATCTAACTAA 60.529 40.741 0.00 0.00 31.96 2.24
440 4111 6.070194 GCCCCCTTGCATAGAATATCTAACTA 60.070 42.308 0.00 0.00 31.96 2.24
441 4112 5.280727 GCCCCCTTGCATAGAATATCTAACT 60.281 44.000 0.00 0.00 31.96 2.24
442 4113 4.944317 GCCCCCTTGCATAGAATATCTAAC 59.056 45.833 0.00 0.00 31.96 2.34
447 4118 1.004745 CCGCCCCCTTGCATAGAATAT 59.995 52.381 0.00 0.00 0.00 1.28
464 4135 1.203313 CGTTCCGAGTTTTGACCGC 59.797 57.895 0.00 0.00 0.00 5.68
485 4156 2.225491 TGAATGTTTCTGGCTTACGCAC 59.775 45.455 0.00 0.00 38.10 5.34
513 4184 2.512692 TGTTGTTGGGATCTCCATGG 57.487 50.000 4.97 4.97 46.52 3.66
514 4185 4.870123 TTTTGTTGTTGGGATCTCCATG 57.130 40.909 4.04 0.00 46.52 3.66
515 4186 5.147032 TCTTTTTGTTGTTGGGATCTCCAT 58.853 37.500 4.04 0.00 46.52 3.41
516 4187 4.541705 TCTTTTTGTTGTTGGGATCTCCA 58.458 39.130 0.00 0.00 45.43 3.86
517 4188 5.509670 CCTTCTTTTTGTTGTTGGGATCTCC 60.510 44.000 0.00 0.00 0.00 3.71
518 4189 5.301805 TCCTTCTTTTTGTTGTTGGGATCTC 59.698 40.000 0.00 0.00 0.00 2.75
520 4191 5.529581 TCCTTCTTTTTGTTGTTGGGATC 57.470 39.130 0.00 0.00 0.00 3.36
521 4192 6.499106 AATCCTTCTTTTTGTTGTTGGGAT 57.501 33.333 0.00 0.00 33.17 3.85
522 4193 5.948742 AATCCTTCTTTTTGTTGTTGGGA 57.051 34.783 0.00 0.00 0.00 4.37
523 4194 5.989168 GGTAATCCTTCTTTTTGTTGTTGGG 59.011 40.000 0.00 0.00 0.00 4.12
524 4195 6.578023 TGGTAATCCTTCTTTTTGTTGTTGG 58.422 36.000 0.00 0.00 34.23 3.77
525 4196 7.171337 CCATGGTAATCCTTCTTTTTGTTGTTG 59.829 37.037 2.57 0.00 34.23 3.33
526 4197 7.070571 TCCATGGTAATCCTTCTTTTTGTTGTT 59.929 33.333 12.58 0.00 34.23 2.83
527 4198 6.553100 TCCATGGTAATCCTTCTTTTTGTTGT 59.447 34.615 12.58 0.00 34.23 3.32
528 4199 6.991938 TCCATGGTAATCCTTCTTTTTGTTG 58.008 36.000 12.58 0.00 34.23 3.33
572 4243 6.757237 TGTGAGGTTCCGTTATAAACTTACA 58.243 36.000 0.00 0.00 37.69 2.41
573 4244 7.656707 TTGTGAGGTTCCGTTATAAACTTAC 57.343 36.000 0.00 0.00 32.40 2.34
591 4262 1.142870 TCACCCCAGGTCTTTTGTGAG 59.857 52.381 0.00 0.00 31.02 3.51
592 4263 1.217916 TCACCCCAGGTCTTTTGTGA 58.782 50.000 0.00 0.00 31.02 3.58
604 4275 5.253330 GAGAATCTAACACATTTCACCCCA 58.747 41.667 0.00 0.00 0.00 4.96
643 4321 5.795441 GTGTTCGATTTTTAGCACTGAATCC 59.205 40.000 0.00 0.00 0.00 3.01
650 4328 6.806120 AAGTTTGTGTTCGATTTTTAGCAC 57.194 33.333 0.00 0.00 0.00 4.40
658 4336 9.360093 TGTTATTGAAAAAGTTTGTGTTCGATT 57.640 25.926 6.58 0.00 0.00 3.34
663 4345 9.871299 GTTTGTGTTATTGAAAAAGTTTGTGTT 57.129 25.926 0.00 0.00 0.00 3.32
664 4346 9.267084 AGTTTGTGTTATTGAAAAAGTTTGTGT 57.733 25.926 0.00 0.00 0.00 3.72
665 4347 9.739786 GAGTTTGTGTTATTGAAAAAGTTTGTG 57.260 29.630 0.00 0.00 0.00 3.33
666 4348 9.482627 TGAGTTTGTGTTATTGAAAAAGTTTGT 57.517 25.926 0.00 0.00 0.00 2.83
667 4349 9.739786 GTGAGTTTGTGTTATTGAAAAAGTTTG 57.260 29.630 0.00 0.00 0.00 2.93
668 4350 9.705290 AGTGAGTTTGTGTTATTGAAAAAGTTT 57.295 25.926 0.00 0.00 0.00 2.66
672 4354 9.781834 CACTAGTGAGTTTGTGTTATTGAAAAA 57.218 29.630 18.45 0.00 31.73 1.94
673 4355 9.168451 TCACTAGTGAGTTTGTGTTATTGAAAA 57.832 29.630 21.74 0.00 34.14 2.29
674 4356 8.725405 TCACTAGTGAGTTTGTGTTATTGAAA 57.275 30.769 21.74 0.00 34.14 2.69
675 4357 8.725405 TTCACTAGTGAGTTTGTGTTATTGAA 57.275 30.769 23.97 2.38 41.13 2.69
676 4358 8.725405 TTTCACTAGTGAGTTTGTGTTATTGA 57.275 30.769 23.97 3.02 41.13 2.57
677 4359 8.070171 CCTTTCACTAGTGAGTTTGTGTTATTG 58.930 37.037 23.97 4.41 41.13 1.90
678 4360 7.228706 CCCTTTCACTAGTGAGTTTGTGTTATT 59.771 37.037 23.97 0.00 41.13 1.40
679 4361 6.710744 CCCTTTCACTAGTGAGTTTGTGTTAT 59.289 38.462 23.97 0.00 41.13 1.89
680 4362 6.053005 CCCTTTCACTAGTGAGTTTGTGTTA 58.947 40.000 23.97 4.91 41.13 2.41
698 4380 1.613925 GCCCTGTCAAGAAACCCTTTC 59.386 52.381 0.00 0.00 39.96 2.62
732 4414 1.134521 GGTTGATGACATCGGCTGGTA 60.135 52.381 10.79 0.00 0.00 3.25
739 4421 3.059120 GCATGAGATGGTTGATGACATCG 60.059 47.826 10.79 0.00 46.13 3.84
754 4436 7.841915 TTGTTTTCGTATATTGAGCATGAGA 57.158 32.000 0.00 0.00 0.00 3.27
755 4437 8.177663 AGTTTGTTTTCGTATATTGAGCATGAG 58.822 33.333 0.00 0.00 0.00 2.90
766 4448 7.370383 AGTCCTTCGTAGTTTGTTTTCGTATA 58.630 34.615 0.00 0.00 0.00 1.47
767 4449 6.218746 AGTCCTTCGTAGTTTGTTTTCGTAT 58.781 36.000 0.00 0.00 0.00 3.06
770 4452 5.388164 GCTAGTCCTTCGTAGTTTGTTTTCG 60.388 44.000 0.00 0.00 0.00 3.46
790 4472 1.463444 GTGTTTACAAGGCGGTGCTAG 59.537 52.381 0.00 0.00 0.00 3.42
797 4479 1.216941 ACGTCGGTGTTTACAAGGCG 61.217 55.000 10.59 10.59 38.93 5.52
814 4496 1.571460 GCTGAGCCTGACAAACACG 59.429 57.895 0.00 0.00 0.00 4.49
875 4557 4.346709 TGAATATCTGATTAGCCGGGTGAA 59.653 41.667 18.40 7.21 0.00 3.18
951 4654 0.957395 ACAGTCGGCAAGGCATTCAG 60.957 55.000 0.00 0.00 0.00 3.02
963 4666 1.597854 TTTGGCAGCTGACAGTCGG 60.598 57.895 23.97 4.84 32.66 4.79
974 4677 1.607767 CGGGGGAAATTTGTTTGGCAG 60.608 52.381 0.00 0.00 0.00 4.85
984 4687 0.041090 ACATCTTGGCGGGGGAAATT 59.959 50.000 0.00 0.00 0.00 1.82
988 4691 4.424711 GCACATCTTGGCGGGGGA 62.425 66.667 0.00 0.00 0.00 4.81
993 4696 0.674581 TTCTGGAGCACATCTTGGCG 60.675 55.000 0.00 0.00 34.54 5.69
994 4697 0.807496 GTTCTGGAGCACATCTTGGC 59.193 55.000 0.00 0.00 0.00 4.52
996 4699 2.189594 TGGTTCTGGAGCACATCTTG 57.810 50.000 0.00 0.00 0.00 3.02
997 4700 3.350833 GAATGGTTCTGGAGCACATCTT 58.649 45.455 0.00 0.00 38.83 2.40
1056 4767 5.104527 CCAGTAATTGTCTCCAGTCCCATTA 60.105 44.000 0.00 0.00 0.00 1.90
1059 4770 2.571653 CCAGTAATTGTCTCCAGTCCCA 59.428 50.000 0.00 0.00 0.00 4.37
1082 4793 3.874370 TTGATCCCCCGTGACCCCA 62.874 63.158 0.00 0.00 0.00 4.96
1335 5061 0.174617 CTTCCTCGTCTCCCTGCTTC 59.825 60.000 0.00 0.00 0.00 3.86
1449 5175 1.135575 GCGATGCCTTCCTTCACTTTG 60.136 52.381 0.00 0.00 0.00 2.77
1499 5225 1.378882 CCCGATCAACCCACAGCATG 61.379 60.000 0.00 0.00 46.00 4.06
1506 5232 3.055240 ACGTAATTAACCCGATCAACCCA 60.055 43.478 1.45 0.00 0.00 4.51
1534 5260 6.948353 ACTAATCACGCAATAATAAGCACTG 58.052 36.000 0.00 0.00 0.00 3.66
1535 5261 6.202954 GGACTAATCACGCAATAATAAGCACT 59.797 38.462 0.00 0.00 0.00 4.40
1546 5288 0.539986 GGAGGGGACTAATCACGCAA 59.460 55.000 0.00 0.00 44.43 4.85
1547 5289 0.616395 TGGAGGGGACTAATCACGCA 60.616 55.000 0.00 0.00 44.43 5.24
1548 5290 0.759346 ATGGAGGGGACTAATCACGC 59.241 55.000 0.00 0.00 44.43 5.34
1549 5291 1.541233 GCATGGAGGGGACTAATCACG 60.541 57.143 0.00 0.00 44.43 4.35
1550 5292 1.771255 AGCATGGAGGGGACTAATCAC 59.229 52.381 0.00 0.00 44.43 3.06
1551 5293 2.050144 GAGCATGGAGGGGACTAATCA 58.950 52.381 0.00 0.00 44.43 2.57
1552 5294 1.001406 CGAGCATGGAGGGGACTAATC 59.999 57.143 0.00 0.00 44.43 1.75
1573 5315 1.226046 CGAGTACGAGGCGTCACAG 60.226 63.158 7.26 0.00 41.54 3.66
1587 5329 0.179084 CAATCCCCATGCGTACGAGT 60.179 55.000 21.65 2.80 0.00 4.18
1623 5365 1.665679 AGCAAACCTTACATGCGATCG 59.334 47.619 11.69 11.69 44.60 3.69
1625 5367 1.745087 CCAGCAAACCTTACATGCGAT 59.255 47.619 0.00 0.00 44.60 4.58
1651 5396 4.194640 CACCAGATCAATACAGTCCCTTG 58.805 47.826 0.00 0.00 0.00 3.61
1655 5400 3.914426 ACCACCAGATCAATACAGTCC 57.086 47.619 0.00 0.00 0.00 3.85
1686 5431 6.150474 CACCCGGGTAATTAATCATGGTAATC 59.850 42.308 29.72 0.00 0.00 1.75
1689 5434 4.202482 CCACCCGGGTAATTAATCATGGTA 60.202 45.833 29.72 0.00 0.00 3.25
1690 5435 3.435890 CCACCCGGGTAATTAATCATGGT 60.436 47.826 29.72 0.00 0.00 3.55
1691 5436 3.153919 CCACCCGGGTAATTAATCATGG 58.846 50.000 29.72 15.84 0.00 3.66
1692 5437 4.093472 TCCACCCGGGTAATTAATCATG 57.907 45.455 29.72 9.88 38.11 3.07
1696 5441 4.414182 TCTCAATCCACCCGGGTAATTAAT 59.586 41.667 29.72 12.52 38.11 1.40
1698 5443 3.386063 TCTCAATCCACCCGGGTAATTA 58.614 45.455 29.72 12.56 38.11 1.40
1729 5486 2.724690 CGTGTAGTTCTTTGGTCTCACG 59.275 50.000 0.00 0.00 40.50 4.35
1779 5540 0.468029 ATTGGATAAGCAAGCCCGGG 60.468 55.000 19.09 19.09 0.00 5.73
1785 5546 2.287915 CCGTTCGGATTGGATAAGCAAG 59.712 50.000 5.19 0.00 0.00 4.01
1786 5547 2.285083 CCGTTCGGATTGGATAAGCAA 58.715 47.619 5.19 0.00 0.00 3.91
1787 5548 1.948104 CCGTTCGGATTGGATAAGCA 58.052 50.000 5.19 0.00 0.00 3.91
1813 5574 4.517453 TCCTAAGTTTTGGACATCGTTTGG 59.483 41.667 0.00 0.00 0.00 3.28
1824 5585 5.872070 CAGCTAAGAGAGTCCTAAGTTTTGG 59.128 44.000 0.00 0.00 0.00 3.28
1827 5588 4.081365 GCCAGCTAAGAGAGTCCTAAGTTT 60.081 45.833 0.00 0.00 0.00 2.66
1855 5616 1.152881 GCCATCCCTTCCAGCGAAT 60.153 57.895 0.00 0.00 0.00 3.34
1860 5621 2.148446 TGAAATGCCATCCCTTCCAG 57.852 50.000 0.00 0.00 0.00 3.86
1869 5630 2.923020 GCGAAATCGTTTGAAATGCCAT 59.077 40.909 4.59 0.00 42.22 4.40
1878 5639 3.806316 AACTGGTAGCGAAATCGTTTG 57.194 42.857 4.59 0.00 42.22 2.93
1879 5640 4.823790 AAAACTGGTAGCGAAATCGTTT 57.176 36.364 4.59 0.00 42.22 3.60
1889 5650 4.157840 CCCCTCACAAATAAAACTGGTAGC 59.842 45.833 0.00 0.00 0.00 3.58
1891 5652 5.586155 TCCCCTCACAAATAAAACTGGTA 57.414 39.130 0.00 0.00 0.00 3.25
1892 5653 4.463050 TCCCCTCACAAATAAAACTGGT 57.537 40.909 0.00 0.00 0.00 4.00
1893 5654 5.016173 TCATCCCCTCACAAATAAAACTGG 58.984 41.667 0.00 0.00 0.00 4.00
1894 5655 5.476599 TGTCATCCCCTCACAAATAAAACTG 59.523 40.000 0.00 0.00 0.00 3.16
1895 5656 5.640147 TGTCATCCCCTCACAAATAAAACT 58.360 37.500 0.00 0.00 0.00 2.66
1902 5663 3.593442 AAGTTGTCATCCCCTCACAAA 57.407 42.857 0.00 0.00 31.95 2.83
1923 5684 6.538945 AGAAACCACCTTGTTGTTTACAAT 57.461 33.333 0.00 0.00 45.31 2.71
1926 5687 5.956642 TGAAGAAACCACCTTGTTGTTTAC 58.043 37.500 0.00 0.00 32.79 2.01
1927 5688 5.946972 TCTGAAGAAACCACCTTGTTGTTTA 59.053 36.000 0.00 0.00 32.79 2.01
1949 5710 5.552178 AGAGTAACGAAAATGCCTTCTTCT 58.448 37.500 0.00 0.00 0.00 2.85
1980 5749 4.158764 AGTTGTAGTTGCTTCGCTAGATCT 59.841 41.667 0.00 0.00 0.00 2.75
1986 5755 1.867233 CACAGTTGTAGTTGCTTCGCT 59.133 47.619 0.00 0.00 0.00 4.93
1999 5768 2.807967 TGAGCGATTTTCCTCACAGTTG 59.192 45.455 0.00 0.00 33.44 3.16
2033 5805 2.811317 GCGAACGTCAGCTGGGAG 60.811 66.667 15.13 8.12 0.00 4.30
2038 5810 0.530744 TTATCTGGCGAACGTCAGCT 59.469 50.000 21.38 15.58 46.45 4.24
2075 5847 9.883142 TCTTATTTTTCTTGAGCAAAAAGGAAA 57.117 25.926 0.00 0.00 36.43 3.13
2091 5863 9.804547 TGCAACGCATAAATTTTCTTATTTTTC 57.195 25.926 0.00 0.00 31.71 2.29
2101 5873 4.305769 TCTGCTTGCAACGCATAAATTTT 58.694 34.783 19.29 0.00 38.76 1.82
2111 5883 5.888412 AATTTTTAACTCTGCTTGCAACG 57.112 34.783 0.00 0.00 0.00 4.10
2131 5903 6.263168 AGACTCCACTGAAATTTCGTTGAAAT 59.737 34.615 16.61 0.00 43.07 2.17
2132 5904 5.588648 AGACTCCACTGAAATTTCGTTGAAA 59.411 36.000 16.61 0.00 35.94 2.69
2133 5905 5.007626 CAGACTCCACTGAAATTTCGTTGAA 59.992 40.000 16.61 0.24 39.94 2.69
2134 5906 4.511454 CAGACTCCACTGAAATTTCGTTGA 59.489 41.667 16.61 14.46 39.94 3.18
2135 5907 4.511454 TCAGACTCCACTGAAATTTCGTTG 59.489 41.667 13.34 11.75 42.79 4.10
2136 5908 4.703897 TCAGACTCCACTGAAATTTCGTT 58.296 39.130 13.34 0.00 42.79 3.85
2137 5909 4.336889 TCAGACTCCACTGAAATTTCGT 57.663 40.909 13.34 10.95 42.79 3.85
2145 5917 9.793259 AGTTAAAAATATTTCAGACTCCACTGA 57.207 29.630 0.10 0.00 43.83 3.41
2147 5919 9.232473 GGAGTTAAAAATATTTCAGACTCCACT 57.768 33.333 29.38 14.85 43.71 4.00
2148 5920 9.010029 TGGAGTTAAAAATATTTCAGACTCCAC 57.990 33.333 31.12 19.35 45.76 4.02
2161 5933 9.838339 TGCCTCAAAATTTTGGAGTTAAAAATA 57.162 25.926 26.45 5.87 36.46 1.40
2162 5934 8.744568 TGCCTCAAAATTTTGGAGTTAAAAAT 57.255 26.923 26.45 0.00 38.54 1.82
2163 5935 8.744568 ATGCCTCAAAATTTTGGAGTTAAAAA 57.255 26.923 26.45 6.96 38.66 1.94
2166 5938 9.651913 GAATATGCCTCAAAATTTTGGAGTTAA 57.348 29.630 26.45 12.03 38.66 2.01
2167 5939 7.973388 CGAATATGCCTCAAAATTTTGGAGTTA 59.027 33.333 26.45 14.38 38.66 2.24
2168 5940 6.813152 CGAATATGCCTCAAAATTTTGGAGTT 59.187 34.615 26.45 13.77 38.66 3.01
2169 5941 6.152661 TCGAATATGCCTCAAAATTTTGGAGT 59.847 34.615 26.45 13.25 38.66 3.85
2170 5942 6.563422 TCGAATATGCCTCAAAATTTTGGAG 58.437 36.000 26.45 20.97 38.66 3.86
2171 5943 6.522625 TCGAATATGCCTCAAAATTTTGGA 57.477 33.333 26.45 14.49 38.66 3.53
2172 5944 7.593875 TTTCGAATATGCCTCAAAATTTTGG 57.406 32.000 26.45 17.95 38.66 3.28
2173 5945 8.871862 TCATTTCGAATATGCCTCAAAATTTTG 58.128 29.630 22.40 22.40 39.48 2.44
2174 5946 9.603921 ATCATTTCGAATATGCCTCAAAATTTT 57.396 25.926 0.00 0.00 0.00 1.82
2175 5947 9.603921 AATCATTTCGAATATGCCTCAAAATTT 57.396 25.926 0.00 0.00 0.00 1.82
2176 5948 9.603921 AAATCATTTCGAATATGCCTCAAAATT 57.396 25.926 0.00 0.00 0.00 1.82
2177 5949 9.252962 GAAATCATTTCGAATATGCCTCAAAAT 57.747 29.630 0.00 0.00 0.00 1.82
2178 5950 8.249638 TGAAATCATTTCGAATATGCCTCAAAA 58.750 29.630 5.64 0.00 42.55 2.44
2179 5951 7.770201 TGAAATCATTTCGAATATGCCTCAAA 58.230 30.769 5.64 0.00 42.55 2.69
2180 5952 7.332213 TGAAATCATTTCGAATATGCCTCAA 57.668 32.000 5.64 0.00 42.55 3.02
2181 5953 6.940831 TGAAATCATTTCGAATATGCCTCA 57.059 33.333 5.64 6.68 42.55 3.86
2182 5954 8.633075 TTTTGAAATCATTTCGAATATGCCTC 57.367 30.769 12.76 4.57 41.39 4.70
2237 6009 8.751335 GCGTTTCAGATTTCAAATTTCACTTAA 58.249 29.630 0.00 0.00 0.00 1.85
2238 6010 7.918033 TGCGTTTCAGATTTCAAATTTCACTTA 59.082 29.630 0.00 0.00 0.00 2.24
2239 6011 6.756074 TGCGTTTCAGATTTCAAATTTCACTT 59.244 30.769 0.00 0.00 0.00 3.16
2240 6012 6.272318 TGCGTTTCAGATTTCAAATTTCACT 58.728 32.000 0.00 0.00 0.00 3.41
2241 6013 6.509317 TGCGTTTCAGATTTCAAATTTCAC 57.491 33.333 0.00 0.00 0.00 3.18
2242 6014 7.531280 TTTGCGTTTCAGATTTCAAATTTCA 57.469 28.000 0.00 0.00 0.00 2.69
2243 6015 8.819152 TTTTTGCGTTTCAGATTTCAAATTTC 57.181 26.923 0.00 0.00 0.00 2.17
2250 6022 9.528847 GGAAATTATTTTTGCGTTTCAGATTTC 57.471 29.630 0.00 0.00 32.04 2.17
2251 6023 8.220434 CGGAAATTATTTTTGCGTTTCAGATTT 58.780 29.630 4.17 0.00 38.21 2.17
2252 6024 7.596995 TCGGAAATTATTTTTGCGTTTCAGATT 59.403 29.630 10.86 0.00 42.49 2.40
2253 6025 7.087639 TCGGAAATTATTTTTGCGTTTCAGAT 58.912 30.769 10.86 0.00 42.49 2.90
2254 6026 6.439599 TCGGAAATTATTTTTGCGTTTCAGA 58.560 32.000 10.86 0.00 42.49 3.27
2255 6027 6.683090 TCGGAAATTATTTTTGCGTTTCAG 57.317 33.333 10.86 0.00 42.49 3.02
2256 6028 7.464830 TTTCGGAAATTATTTTTGCGTTTCA 57.535 28.000 10.86 0.00 42.49 2.69
2257 6029 9.455559 GTATTTCGGAAATTATTTTTGCGTTTC 57.544 29.630 20.04 0.00 42.49 2.78
2258 6030 8.157183 CGTATTTCGGAAATTATTTTTGCGTTT 58.843 29.630 20.04 0.00 42.49 3.60
2259 6031 7.326547 ACGTATTTCGGAAATTATTTTTGCGTT 59.673 29.630 20.04 0.00 42.49 4.84
2260 6032 6.802834 ACGTATTTCGGAAATTATTTTTGCGT 59.197 30.769 20.04 13.23 42.49 5.24
2261 6033 7.199898 ACGTATTTCGGAAATTATTTTTGCG 57.800 32.000 20.04 12.66 44.69 4.85
2290 6062 9.416794 TCGCTTAAATATGCAAAAATTCAGAAA 57.583 25.926 0.00 0.00 0.00 2.52
2291 6063 8.978564 TCGCTTAAATATGCAAAAATTCAGAA 57.021 26.923 0.00 0.00 0.00 3.02
2292 6064 7.701924 CCTCGCTTAAATATGCAAAAATTCAGA 59.298 33.333 0.00 0.00 0.00 3.27
2293 6065 7.489113 ACCTCGCTTAAATATGCAAAAATTCAG 59.511 33.333 0.00 0.00 0.00 3.02
2294 6066 7.319646 ACCTCGCTTAAATATGCAAAAATTCA 58.680 30.769 0.00 0.00 0.00 2.57
2295 6067 7.043391 GGACCTCGCTTAAATATGCAAAAATTC 60.043 37.037 0.00 0.00 0.00 2.17
2296 6068 6.756542 GGACCTCGCTTAAATATGCAAAAATT 59.243 34.615 0.00 0.00 0.00 1.82
2297 6069 6.273071 GGACCTCGCTTAAATATGCAAAAAT 58.727 36.000 0.00 0.00 0.00 1.82
2298 6070 5.646606 GGACCTCGCTTAAATATGCAAAAA 58.353 37.500 0.00 0.00 0.00 1.94
2299 6071 4.201871 CGGACCTCGCTTAAATATGCAAAA 60.202 41.667 0.00 0.00 0.00 2.44
2300 6072 3.311322 CGGACCTCGCTTAAATATGCAAA 59.689 43.478 0.00 0.00 0.00 3.68
2301 6073 2.869801 CGGACCTCGCTTAAATATGCAA 59.130 45.455 0.00 0.00 0.00 4.08
2302 6074 2.101750 TCGGACCTCGCTTAAATATGCA 59.898 45.455 0.00 0.00 39.05 3.96
2303 6075 2.750948 TCGGACCTCGCTTAAATATGC 58.249 47.619 0.00 0.00 39.05 3.14
2304 6076 5.924475 ATTTCGGACCTCGCTTAAATATG 57.076 39.130 0.00 0.00 39.05 1.78
2305 6077 9.886132 ATATAATTTCGGACCTCGCTTAAATAT 57.114 29.630 0.00 0.00 39.05 1.28
2306 6078 9.715121 AATATAATTTCGGACCTCGCTTAAATA 57.285 29.630 0.00 0.00 39.05 1.40
2307 6079 8.617290 AATATAATTTCGGACCTCGCTTAAAT 57.383 30.769 0.00 0.00 39.05 1.40
2308 6080 7.929785 AGAATATAATTTCGGACCTCGCTTAAA 59.070 33.333 0.00 0.00 39.05 1.52
2309 6081 7.439381 AGAATATAATTTCGGACCTCGCTTAA 58.561 34.615 0.00 0.00 39.05 1.85
2310 6082 6.989659 AGAATATAATTTCGGACCTCGCTTA 58.010 36.000 0.00 0.00 39.05 3.09
2311 6083 5.855045 AGAATATAATTTCGGACCTCGCTT 58.145 37.500 0.00 0.00 39.05 4.68
2312 6084 5.470047 AGAATATAATTTCGGACCTCGCT 57.530 39.130 0.00 0.00 39.05 4.93
2313 6085 6.347483 GGAAAGAATATAATTTCGGACCTCGC 60.347 42.308 6.52 0.00 36.49 5.03
2314 6086 6.128902 CGGAAAGAATATAATTTCGGACCTCG 60.129 42.308 11.61 4.46 37.72 4.63
2315 6087 6.927381 TCGGAAAGAATATAATTTCGGACCTC 59.073 38.462 14.01 0.01 38.82 3.85
2316 6088 6.823497 TCGGAAAGAATATAATTTCGGACCT 58.177 36.000 14.01 0.00 38.82 3.85
2317 6089 7.486802 TTCGGAAAGAATATAATTTCGGACC 57.513 36.000 16.12 0.00 41.52 4.46
2318 6090 9.946165 AATTTCGGAAAGAATATAATTTCGGAC 57.054 29.630 16.12 2.17 41.52 4.79
2329 6101 9.699703 CCAAGGTTTTTAATTTCGGAAAGAATA 57.300 29.630 9.30 0.17 38.86 1.75
2330 6102 8.208224 ACCAAGGTTTTTAATTTCGGAAAGAAT 58.792 29.630 9.30 1.06 38.86 2.40
2331 6103 7.557724 ACCAAGGTTTTTAATTTCGGAAAGAA 58.442 30.769 9.30 3.28 37.01 2.52
2332 6104 7.114866 ACCAAGGTTTTTAATTTCGGAAAGA 57.885 32.000 9.30 0.00 0.00 2.52
2333 6105 7.626446 CAACCAAGGTTTTTAATTTCGGAAAG 58.374 34.615 9.30 0.00 36.00 2.62
2334 6106 6.037281 GCAACCAAGGTTTTTAATTTCGGAAA 59.963 34.615 5.52 5.52 36.00 3.13
2335 6107 5.524281 GCAACCAAGGTTTTTAATTTCGGAA 59.476 36.000 0.79 0.00 36.00 4.30
2336 6108 5.051153 GCAACCAAGGTTTTTAATTTCGGA 58.949 37.500 0.79 0.00 36.00 4.55
2337 6109 4.811557 TGCAACCAAGGTTTTTAATTTCGG 59.188 37.500 0.79 0.00 36.00 4.30
2338 6110 5.555443 CGTGCAACCAAGGTTTTTAATTTCG 60.555 40.000 0.79 0.00 36.00 3.46
2339 6111 5.733299 CGTGCAACCAAGGTTTTTAATTTC 58.267 37.500 0.79 0.00 36.00 2.17
2340 6112 4.034626 GCGTGCAACCAAGGTTTTTAATTT 59.965 37.500 0.79 0.00 36.00 1.82
2341 6113 3.558006 GCGTGCAACCAAGGTTTTTAATT 59.442 39.130 0.79 0.00 36.00 1.40
2342 6114 3.127589 GCGTGCAACCAAGGTTTTTAAT 58.872 40.909 0.79 0.00 36.00 1.40
2343 6115 2.541556 GCGTGCAACCAAGGTTTTTAA 58.458 42.857 0.79 0.00 36.00 1.52
2344 6116 1.202428 GGCGTGCAACCAAGGTTTTTA 60.202 47.619 0.79 0.00 36.00 1.52
2345 6117 0.461163 GGCGTGCAACCAAGGTTTTT 60.461 50.000 0.79 0.00 36.00 1.94
2346 6118 1.142965 GGCGTGCAACCAAGGTTTT 59.857 52.632 0.79 0.00 36.00 2.43
2347 6119 0.466555 TAGGCGTGCAACCAAGGTTT 60.467 50.000 9.56 0.00 36.00 3.27
2348 6120 0.466555 TTAGGCGTGCAACCAAGGTT 60.467 50.000 9.56 0.00 39.13 3.50
2349 6121 1.149627 TTAGGCGTGCAACCAAGGT 59.850 52.632 9.56 0.00 0.00 3.50
2350 6122 1.169661 TGTTAGGCGTGCAACCAAGG 61.170 55.000 9.56 0.00 0.00 3.61
2351 6123 0.238289 CTGTTAGGCGTGCAACCAAG 59.762 55.000 9.56 0.00 0.00 3.61
2352 6124 0.464735 ACTGTTAGGCGTGCAACCAA 60.465 50.000 9.56 0.03 0.00 3.67
2353 6125 0.464735 AACTGTTAGGCGTGCAACCA 60.465 50.000 9.56 0.00 0.00 3.67
2354 6126 0.040425 CAACTGTTAGGCGTGCAACC 60.040 55.000 0.00 0.00 0.00 3.77
2355 6127 0.040425 CCAACTGTTAGGCGTGCAAC 60.040 55.000 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.