Multiple sequence alignment - TraesCS1A01G272300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G272300 chr1A 100.000 3663 0 0 1 3663 465494763 465498425 0.000000e+00 6765.0
1 TraesCS1A01G272300 chr1A 89.189 111 10 2 145 254 146971069 146970960 1.770000e-28 137.0
2 TraesCS1A01G272300 chr1D 93.470 1761 73 17 1880 3604 366475898 366474144 0.000000e+00 2577.0
3 TraesCS1A01G272300 chr1D 90.435 1150 60 22 432 1555 366477545 366476420 0.000000e+00 1469.0
4 TraesCS1A01G272300 chr1D 94.505 182 9 1 1572 1752 366476434 366476253 2.790000e-71 279.0
5 TraesCS1A01G272300 chr1D 89.130 138 5 7 3 139 366479488 366479360 2.930000e-36 163.0
6 TraesCS1A01G272300 chr1D 98.361 61 1 0 3603 3663 366474065 366474005 1.390000e-19 108.0
7 TraesCS1A01G272300 chr1B 93.260 1187 42 17 1868 3029 491232309 491233482 0.000000e+00 1714.0
8 TraesCS1A01G272300 chr1B 89.779 949 58 21 628 1555 491230797 491231727 0.000000e+00 1179.0
9 TraesCS1A01G272300 chr1B 87.092 674 59 19 3015 3663 491233781 491234451 0.000000e+00 737.0
10 TraesCS1A01G272300 chr1B 92.771 166 11 1 1572 1736 491231713 491231878 4.730000e-59 239.0
11 TraesCS1A01G272300 chr1B 89.071 183 10 6 416 598 491230422 491230594 6.160000e-53 219.0
12 TraesCS1A01G272300 chr1B 87.402 127 10 2 133 254 371439993 371440118 1.370000e-29 141.0
13 TraesCS1A01G272300 chr1B 90.351 114 1 4 3 116 491230153 491230256 1.370000e-29 141.0
14 TraesCS1A01G272300 chr1B 96.364 55 2 0 252 306 28770600 28770654 1.400000e-14 91.6
15 TraesCS1A01G272300 chr3D 83.965 343 35 14 2090 2413 486050791 486050450 9.880000e-81 311.0
16 TraesCS1A01G272300 chr3D 87.387 111 14 0 145 255 18703024 18703134 1.070000e-25 128.0
17 TraesCS1A01G272300 chr3D 94.118 51 3 0 1121 1171 486052345 486052295 1.090000e-10 78.7
18 TraesCS1A01G272300 chr3A 91.080 213 16 3 2087 2297 629228122 629227911 5.990000e-73 285.0
19 TraesCS1A01G272300 chr3A 96.226 53 2 0 251 303 652030232 652030284 1.810000e-13 87.9
20 TraesCS1A01G272300 chr3A 89.583 48 5 0 1798 1845 710299700 710299653 1.100000e-05 62.1
21 TraesCS1A01G272300 chr3B 82.336 351 38 19 2087 2416 648747038 648746691 2.150000e-72 283.0
22 TraesCS1A01G272300 chr3B 87.273 110 14 0 145 254 641991324 641991433 3.840000e-25 126.0
23 TraesCS1A01G272300 chr3B 94.118 51 3 0 1121 1171 648748936 648748886 1.090000e-10 78.7
24 TraesCS1A01G272300 chr6D 85.965 171 24 0 2108 2278 409655563 409655733 2.250000e-42 183.0
25 TraesCS1A01G272300 chr6D 88.571 105 12 0 151 255 265769307 265769203 1.070000e-25 128.0
26 TraesCS1A01G272300 chr6B 82.927 164 28 0 2115 2278 615167408 615167571 8.200000e-32 148.0
27 TraesCS1A01G272300 chr6B 81.707 164 30 0 2115 2278 615230660 615230823 1.770000e-28 137.0
28 TraesCS1A01G272300 chr2A 90.000 110 11 0 145 254 526096904 526097013 3.810000e-30 143.0
29 TraesCS1A01G272300 chr2A 96.970 33 0 1 2900 2931 60805596 60805564 2.000000e-03 54.7
30 TraesCS1A01G272300 chr6A 88.288 111 13 0 145 255 601961890 601962000 2.290000e-27 134.0
31 TraesCS1A01G272300 chr2B 87.826 115 13 1 140 254 366976737 366976624 2.290000e-27 134.0
32 TraesCS1A01G272300 chr2B 94.643 56 3 0 251 306 615763399 615763344 1.810000e-13 87.9
33 TraesCS1A01G272300 chr4D 88.571 105 12 0 151 255 35636430 35636326 1.070000e-25 128.0
34 TraesCS1A01G272300 chr7B 96.226 53 2 0 251 303 614325132 614325184 1.810000e-13 87.9
35 TraesCS1A01G272300 chr4B 96.226 53 2 0 251 303 41557186 41557238 1.810000e-13 87.9
36 TraesCS1A01G272300 chr7A 91.803 61 5 0 251 311 632617791 632617851 6.520000e-13 86.1
37 TraesCS1A01G272300 chrUn 92.857 56 4 0 251 306 12086604 12086549 8.430000e-12 82.4
38 TraesCS1A01G272300 chrUn 92.857 56 4 0 251 306 144756057 144756002 8.430000e-12 82.4
39 TraesCS1A01G272300 chrUn 92.857 56 4 0 251 306 144793122 144793067 8.430000e-12 82.4
40 TraesCS1A01G272300 chrUn 86.000 50 7 0 1805 1854 424864 424815 2.000000e-03 54.7
41 TraesCS1A01G272300 chrUn 86.000 50 7 0 1805 1854 493230 493181 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G272300 chr1A 465494763 465498425 3662 False 6765.000000 6765 100.000000 1 3663 1 chr1A.!!$F1 3662
1 TraesCS1A01G272300 chr1D 366474005 366479488 5483 True 919.200000 2577 93.180200 3 3663 5 chr1D.!!$R1 3660
2 TraesCS1A01G272300 chr1B 491230153 491234451 4298 False 704.833333 1714 90.387333 3 3663 6 chr1B.!!$F3 3660

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
274 275 0.033503 CCTTGGTGGGTTGGGGATAC 60.034 60.0 0.0 0.0 0.00 2.24 F
903 2787 0.038159 CCAGTCCACCTCGTGAAGTC 60.038 60.0 0.0 0.0 35.23 3.01 F
1552 3456 0.108329 CGTGCCCCCTAGTACAAGTG 60.108 60.0 0.0 0.0 0.00 3.16 F
1675 3579 0.597637 AAAGACAGAGTGGTGCGTCG 60.598 55.0 0.0 0.0 33.56 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1461 3363 1.226101 CACATGCACGCCGAACATC 60.226 57.895 0.00 0.0 0.00 3.06 R
2452 4765 0.038744 AGTAGGACCCCGAAGACGAA 59.961 55.000 0.00 0.0 42.66 3.85 R
2518 4846 0.179134 CGTAACCCGAAGCAGAGGAG 60.179 60.000 0.00 0.0 39.56 3.69 R
3247 5917 0.760567 ATAGATGGCCAGGAGCGACA 60.761 55.000 13.05 0.0 45.17 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.304217 AGGACCACGTCACTCCGAT 60.304 57.895 0.00 0.00 33.68 4.18
42 43 2.646175 CCACGTCACTCCGATGGGT 61.646 63.158 0.00 0.00 31.42 4.51
59 60 1.600638 GTGTGGTGTAGGGTAGGGC 59.399 63.158 0.00 0.00 0.00 5.19
60 61 1.985662 TGTGGTGTAGGGTAGGGCG 60.986 63.158 0.00 0.00 0.00 6.13
61 62 1.986210 GTGGTGTAGGGTAGGGCGT 60.986 63.158 0.00 0.00 0.00 5.68
62 63 1.683365 TGGTGTAGGGTAGGGCGTC 60.683 63.158 0.00 0.00 0.00 5.19
63 64 2.429767 GGTGTAGGGTAGGGCGTCC 61.430 68.421 0.00 0.00 0.00 4.79
132 133 8.370182 TGTATGCATGAATGTAGTCATATGTCT 58.630 33.333 10.16 7.62 36.04 3.41
133 134 9.212641 GTATGCATGAATGTAGTCATATGTCTT 57.787 33.333 10.16 0.00 36.04 3.01
134 135 8.687292 ATGCATGAATGTAGTCATATGTCTTT 57.313 30.769 7.79 0.00 36.04 2.52
135 136 8.510243 TGCATGAATGTAGTCATATGTCTTTT 57.490 30.769 7.79 1.05 36.04 2.27
136 137 8.959548 TGCATGAATGTAGTCATATGTCTTTTT 58.040 29.630 7.79 0.73 36.04 1.94
156 157 4.488126 TTTTAGCATCAGACACAAGCAC 57.512 40.909 0.00 0.00 0.00 4.40
157 158 3.407424 TTAGCATCAGACACAAGCACT 57.593 42.857 0.00 0.00 0.00 4.40
158 159 1.805869 AGCATCAGACACAAGCACTC 58.194 50.000 0.00 0.00 0.00 3.51
159 160 1.071228 AGCATCAGACACAAGCACTCA 59.929 47.619 0.00 0.00 0.00 3.41
160 161 2.082231 GCATCAGACACAAGCACTCAT 58.918 47.619 0.00 0.00 0.00 2.90
161 162 3.055602 AGCATCAGACACAAGCACTCATA 60.056 43.478 0.00 0.00 0.00 2.15
162 163 3.875727 GCATCAGACACAAGCACTCATAT 59.124 43.478 0.00 0.00 0.00 1.78
163 164 5.052481 GCATCAGACACAAGCACTCATATA 58.948 41.667 0.00 0.00 0.00 0.86
164 165 5.050499 GCATCAGACACAAGCACTCATATAC 60.050 44.000 0.00 0.00 0.00 1.47
165 166 5.659440 TCAGACACAAGCACTCATATACA 57.341 39.130 0.00 0.00 0.00 2.29
166 167 6.225981 TCAGACACAAGCACTCATATACAT 57.774 37.500 0.00 0.00 0.00 2.29
167 168 6.044682 TCAGACACAAGCACTCATATACATG 58.955 40.000 0.00 0.00 0.00 3.21
168 169 4.813161 AGACACAAGCACTCATATACATGC 59.187 41.667 0.00 0.00 38.39 4.06
169 170 3.557185 ACACAAGCACTCATATACATGCG 59.443 43.478 0.00 0.00 42.98 4.73
170 171 2.545526 ACAAGCACTCATATACATGCGC 59.454 45.455 0.00 0.00 42.98 6.09
171 172 2.531522 AGCACTCATATACATGCGCA 57.468 45.000 14.96 14.96 42.98 6.09
172 173 3.049708 AGCACTCATATACATGCGCAT 57.950 42.857 19.28 19.28 42.98 4.73
173 174 4.192429 AGCACTCATATACATGCGCATA 57.808 40.909 24.84 9.30 42.98 3.14
174 175 3.928992 AGCACTCATATACATGCGCATAC 59.071 43.478 24.84 0.00 42.98 2.39
175 176 3.679502 GCACTCATATACATGCGCATACA 59.320 43.478 24.84 14.18 31.73 2.29
176 177 4.434725 GCACTCATATACATGCGCATACAC 60.435 45.833 24.84 0.00 31.73 2.90
177 178 4.925646 CACTCATATACATGCGCATACACT 59.074 41.667 24.84 10.63 31.73 3.55
178 179 5.061435 CACTCATATACATGCGCATACACTC 59.939 44.000 24.84 0.00 31.73 3.51
179 180 5.132897 TCATATACATGCGCATACACTCA 57.867 39.130 24.84 6.80 31.73 3.41
180 181 4.923281 TCATATACATGCGCATACACTCAC 59.077 41.667 24.84 0.00 31.73 3.51
181 182 1.934589 TACATGCGCATACACTCACC 58.065 50.000 24.84 0.00 0.00 4.02
182 183 0.744414 ACATGCGCATACACTCACCC 60.744 55.000 24.84 0.00 0.00 4.61
183 184 0.462581 CATGCGCATACACTCACCCT 60.463 55.000 24.84 0.00 0.00 4.34
184 185 0.253044 ATGCGCATACACTCACCCTT 59.747 50.000 24.02 0.00 0.00 3.95
185 186 0.899019 TGCGCATACACTCACCCTTA 59.101 50.000 5.66 0.00 0.00 2.69
186 187 1.484653 TGCGCATACACTCACCCTTAT 59.515 47.619 5.66 0.00 0.00 1.73
187 188 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
188 189 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
189 190 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
190 191 3.555956 CGCATACACTCACCCTTATGAAC 59.444 47.826 0.00 0.00 0.00 3.18
191 192 3.555956 GCATACACTCACCCTTATGAACG 59.444 47.826 0.00 0.00 0.00 3.95
192 193 4.755411 CATACACTCACCCTTATGAACGT 58.245 43.478 0.00 0.00 0.00 3.99
193 194 3.040147 ACACTCACCCTTATGAACGTG 57.960 47.619 0.00 0.00 33.28 4.49
194 195 2.367567 ACACTCACCCTTATGAACGTGT 59.632 45.455 0.00 0.00 34.74 4.49
195 196 3.575256 ACACTCACCCTTATGAACGTGTA 59.425 43.478 0.00 0.00 36.66 2.90
196 197 3.924686 CACTCACCCTTATGAACGTGTAC 59.075 47.826 0.00 0.00 0.00 2.90
197 198 3.575256 ACTCACCCTTATGAACGTGTACA 59.425 43.478 0.00 0.00 0.00 2.90
198 199 3.916761 TCACCCTTATGAACGTGTACAC 58.083 45.455 16.32 16.32 0.00 2.90
209 210 2.818350 GTGTACACGCACACCCTAC 58.182 57.895 10.84 0.00 42.46 3.18
210 211 0.316204 GTGTACACGCACACCCTACT 59.684 55.000 10.84 0.00 42.46 2.57
211 212 0.599558 TGTACACGCACACCCTACTC 59.400 55.000 0.00 0.00 0.00 2.59
212 213 0.108945 GTACACGCACACCCTACTCC 60.109 60.000 0.00 0.00 0.00 3.85
213 214 0.251474 TACACGCACACCCTACTCCT 60.251 55.000 0.00 0.00 0.00 3.69
214 215 0.251474 ACACGCACACCCTACTCCTA 60.251 55.000 0.00 0.00 0.00 2.94
215 216 1.112113 CACGCACACCCTACTCCTAT 58.888 55.000 0.00 0.00 0.00 2.57
216 217 1.112113 ACGCACACCCTACTCCTATG 58.888 55.000 0.00 0.00 0.00 2.23
217 218 1.341679 ACGCACACCCTACTCCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
218 219 1.754803 CGCACACCCTACTCCTATGAA 59.245 52.381 0.00 0.00 0.00 2.57
219 220 2.365617 CGCACACCCTACTCCTATGAAT 59.634 50.000 0.00 0.00 0.00 2.57
220 221 3.572682 CGCACACCCTACTCCTATGAATA 59.427 47.826 0.00 0.00 0.00 1.75
221 222 4.558898 CGCACACCCTACTCCTATGAATAC 60.559 50.000 0.00 0.00 0.00 1.89
222 223 4.262506 GCACACCCTACTCCTATGAATACC 60.263 50.000 0.00 0.00 0.00 2.73
223 224 5.148502 CACACCCTACTCCTATGAATACCT 58.851 45.833 0.00 0.00 0.00 3.08
224 225 5.244178 CACACCCTACTCCTATGAATACCTC 59.756 48.000 0.00 0.00 0.00 3.85
225 226 5.136392 ACACCCTACTCCTATGAATACCTCT 59.864 44.000 0.00 0.00 0.00 3.69
226 227 5.478679 CACCCTACTCCTATGAATACCTCTG 59.521 48.000 0.00 0.00 0.00 3.35
227 228 5.375956 ACCCTACTCCTATGAATACCTCTGA 59.624 44.000 0.00 0.00 0.00 3.27
228 229 5.949354 CCCTACTCCTATGAATACCTCTGAG 59.051 48.000 0.00 0.00 0.00 3.35
229 230 6.240321 CCCTACTCCTATGAATACCTCTGAGA 60.240 46.154 6.17 0.00 0.00 3.27
230 231 6.884295 CCTACTCCTATGAATACCTCTGAGAG 59.116 46.154 6.17 1.57 0.00 3.20
231 232 6.523035 ACTCCTATGAATACCTCTGAGAGA 57.477 41.667 11.82 0.00 0.00 3.10
232 233 6.303839 ACTCCTATGAATACCTCTGAGAGAC 58.696 44.000 11.82 0.00 0.00 3.36
233 234 5.636123 TCCTATGAATACCTCTGAGAGACC 58.364 45.833 11.82 0.00 0.00 3.85
234 235 5.134509 TCCTATGAATACCTCTGAGAGACCA 59.865 44.000 11.82 1.74 0.00 4.02
235 236 5.835819 CCTATGAATACCTCTGAGAGACCAA 59.164 44.000 11.82 0.00 0.00 3.67
236 237 5.867903 ATGAATACCTCTGAGAGACCAAG 57.132 43.478 11.82 0.00 0.00 3.61
237 238 3.449018 TGAATACCTCTGAGAGACCAAGC 59.551 47.826 11.82 0.00 0.00 4.01
238 239 1.853963 TACCTCTGAGAGACCAAGCC 58.146 55.000 11.82 0.00 0.00 4.35
239 240 1.254284 ACCTCTGAGAGACCAAGCCG 61.254 60.000 11.82 0.00 0.00 5.52
240 241 0.967887 CCTCTGAGAGACCAAGCCGA 60.968 60.000 11.82 0.00 0.00 5.54
241 242 0.172352 CTCTGAGAGACCAAGCCGAC 59.828 60.000 2.60 0.00 0.00 4.79
242 243 0.539669 TCTGAGAGACCAAGCCGACA 60.540 55.000 0.00 0.00 0.00 4.35
243 244 0.534412 CTGAGAGACCAAGCCGACAT 59.466 55.000 0.00 0.00 0.00 3.06
244 245 1.751351 CTGAGAGACCAAGCCGACATA 59.249 52.381 0.00 0.00 0.00 2.29
245 246 2.363680 CTGAGAGACCAAGCCGACATAT 59.636 50.000 0.00 0.00 0.00 1.78
246 247 2.362397 TGAGAGACCAAGCCGACATATC 59.638 50.000 0.00 0.00 0.00 1.63
247 248 2.362397 GAGAGACCAAGCCGACATATCA 59.638 50.000 0.00 0.00 0.00 2.15
248 249 2.968574 AGAGACCAAGCCGACATATCAT 59.031 45.455 0.00 0.00 0.00 2.45
249 250 3.006323 AGAGACCAAGCCGACATATCATC 59.994 47.826 0.00 0.00 0.00 2.92
250 251 2.968574 AGACCAAGCCGACATATCATCT 59.031 45.455 0.00 0.00 0.00 2.90
251 252 3.389329 AGACCAAGCCGACATATCATCTT 59.611 43.478 0.00 0.00 0.00 2.40
252 253 3.470709 ACCAAGCCGACATATCATCTTG 58.529 45.455 0.00 0.00 35.33 3.02
253 254 3.134623 ACCAAGCCGACATATCATCTTGA 59.865 43.478 4.37 0.00 36.59 3.02
254 255 4.129380 CCAAGCCGACATATCATCTTGAA 58.871 43.478 4.37 0.00 36.59 2.69
255 256 4.024556 CCAAGCCGACATATCATCTTGAAC 60.025 45.833 4.37 0.00 36.59 3.18
256 257 3.733337 AGCCGACATATCATCTTGAACC 58.267 45.455 0.00 0.00 0.00 3.62
257 258 3.389329 AGCCGACATATCATCTTGAACCT 59.611 43.478 0.00 0.00 0.00 3.50
258 259 4.130118 GCCGACATATCATCTTGAACCTT 58.870 43.478 0.00 0.00 0.00 3.50
259 260 4.024556 GCCGACATATCATCTTGAACCTTG 60.025 45.833 0.00 0.00 0.00 3.61
260 261 4.512944 CCGACATATCATCTTGAACCTTGG 59.487 45.833 0.00 0.00 0.00 3.61
261 262 5.118990 CGACATATCATCTTGAACCTTGGT 58.881 41.667 0.00 0.00 0.00 3.67
262 263 5.007039 CGACATATCATCTTGAACCTTGGTG 59.993 44.000 0.00 0.00 0.00 4.17
263 264 5.195940 ACATATCATCTTGAACCTTGGTGG 58.804 41.667 0.00 0.00 42.93 4.61
264 265 2.584835 TCATCTTGAACCTTGGTGGG 57.415 50.000 0.00 0.00 41.11 4.61
265 266 1.780309 TCATCTTGAACCTTGGTGGGT 59.220 47.619 0.00 0.00 42.05 4.51
270 271 2.612251 AACCTTGGTGGGTTGGGG 59.388 61.111 0.00 0.00 46.51 4.96
271 272 2.015726 AACCTTGGTGGGTTGGGGA 61.016 57.895 0.00 0.00 46.51 4.81
272 273 1.376249 AACCTTGGTGGGTTGGGGAT 61.376 55.000 0.00 0.00 46.51 3.85
273 274 0.478789 ACCTTGGTGGGTTGGGGATA 60.479 55.000 0.00 0.00 41.11 2.59
274 275 0.033503 CCTTGGTGGGTTGGGGATAC 60.034 60.000 0.00 0.00 0.00 2.24
290 291 3.816994 GGATACCATTGTCCACCTAACC 58.183 50.000 0.00 0.00 33.15 2.85
291 292 3.201266 GGATACCATTGTCCACCTAACCA 59.799 47.826 0.00 0.00 33.15 3.67
292 293 4.141251 GGATACCATTGTCCACCTAACCAT 60.141 45.833 0.00 0.00 33.15 3.55
293 294 3.366052 ACCATTGTCCACCTAACCATC 57.634 47.619 0.00 0.00 0.00 3.51
294 295 2.919602 ACCATTGTCCACCTAACCATCT 59.080 45.455 0.00 0.00 0.00 2.90
295 296 3.054361 ACCATTGTCCACCTAACCATCTC 60.054 47.826 0.00 0.00 0.00 2.75
296 297 3.054434 CCATTGTCCACCTAACCATCTCA 60.054 47.826 0.00 0.00 0.00 3.27
297 298 4.567537 CCATTGTCCACCTAACCATCTCAA 60.568 45.833 0.00 0.00 0.00 3.02
298 299 4.927267 TTGTCCACCTAACCATCTCAAT 57.073 40.909 0.00 0.00 0.00 2.57
299 300 4.487714 TGTCCACCTAACCATCTCAATC 57.512 45.455 0.00 0.00 0.00 2.67
300 301 3.843619 TGTCCACCTAACCATCTCAATCA 59.156 43.478 0.00 0.00 0.00 2.57
301 302 4.192317 GTCCACCTAACCATCTCAATCAC 58.808 47.826 0.00 0.00 0.00 3.06
302 303 3.843619 TCCACCTAACCATCTCAATCACA 59.156 43.478 0.00 0.00 0.00 3.58
303 304 4.474651 TCCACCTAACCATCTCAATCACAT 59.525 41.667 0.00 0.00 0.00 3.21
304 305 4.577693 CCACCTAACCATCTCAATCACATG 59.422 45.833 0.00 0.00 0.00 3.21
335 336 3.860641 TGCATGGTGTGTATGTAGTCAG 58.139 45.455 0.00 0.00 0.00 3.51
370 2031 3.378427 CCGTAGCCCTAATACCGTATACC 59.622 52.174 0.00 0.00 0.00 2.73
420 2093 3.067601 TCTTACTGCACTGTCTCGTTTGA 59.932 43.478 0.00 0.00 0.00 2.69
489 2188 3.864686 GTACACGCATGCGGCTGG 61.865 66.667 39.95 27.81 44.69 4.85
504 2203 0.179156 GCTGGAACAATGCGTCCATG 60.179 55.000 6.70 3.66 38.70 3.66
505 2204 1.452110 CTGGAACAATGCGTCCATGA 58.548 50.000 6.70 0.00 38.70 3.07
507 2206 1.539388 TGGAACAATGCGTCCATGAAC 59.461 47.619 2.45 0.00 31.92 3.18
509 2208 1.539388 GAACAATGCGTCCATGAACCA 59.461 47.619 0.00 0.00 0.00 3.67
510 2209 1.838112 ACAATGCGTCCATGAACCAT 58.162 45.000 0.00 0.00 0.00 3.55
511 2210 1.473677 ACAATGCGTCCATGAACCATG 59.526 47.619 0.00 0.00 41.10 3.66
542 2241 2.892425 CGATCGCCAAGTCTGCCC 60.892 66.667 0.26 0.00 0.00 5.36
607 2306 1.875514 CTCTCTCTCTCGCCAGATCTG 59.124 57.143 16.24 16.24 0.00 2.90
743 2615 1.369321 GCCCGCTTAGCTCAGCTAT 59.631 57.895 17.41 0.00 41.01 2.97
744 2616 0.603569 GCCCGCTTAGCTCAGCTATA 59.396 55.000 17.41 0.00 41.01 1.31
745 2617 1.403514 GCCCGCTTAGCTCAGCTATAG 60.404 57.143 17.41 9.10 41.01 1.31
746 2618 1.403514 CCCGCTTAGCTCAGCTATAGC 60.404 57.143 21.66 21.66 41.01 2.97
823 2696 3.624861 AGCCGCATTACATCTTCTTCTTG 59.375 43.478 0.00 0.00 0.00 3.02
851 2724 2.092914 TCTACTCGAGTGCTCATCCTCA 60.093 50.000 28.12 2.62 0.00 3.86
863 2743 3.666274 CTCATCCTCAATCTCATGCCTC 58.334 50.000 0.00 0.00 0.00 4.70
891 2775 3.446161 GTGTATATATAGCGGCCAGTCCA 59.554 47.826 2.24 0.00 34.01 4.02
903 2787 0.038159 CCAGTCCACCTCGTGAAGTC 60.038 60.000 0.00 0.00 35.23 3.01
959 2847 5.520632 TGAGAGTACTTTGAACTCGAACTG 58.479 41.667 0.00 0.00 46.46 3.16
966 2858 3.746045 TTGAACTCGAACTGGTTAGCT 57.254 42.857 0.00 0.00 0.00 3.32
973 2865 2.950309 TCGAACTGGTTAGCTAGCTAGG 59.050 50.000 23.03 16.40 0.00 3.02
1300 3201 2.895680 TCGCAGCAGGTGAGGATC 59.104 61.111 3.02 0.00 0.00 3.36
1351 3252 2.224281 TGTGAGAGGAGAATGTTTGCGT 60.224 45.455 0.00 0.00 0.00 5.24
1352 3253 2.808543 GTGAGAGGAGAATGTTTGCGTT 59.191 45.455 0.00 0.00 0.00 4.84
1353 3254 3.251004 GTGAGAGGAGAATGTTTGCGTTT 59.749 43.478 0.00 0.00 0.00 3.60
1354 3255 3.250762 TGAGAGGAGAATGTTTGCGTTTG 59.749 43.478 0.00 0.00 0.00 2.93
1355 3256 2.030805 AGAGGAGAATGTTTGCGTTTGC 60.031 45.455 0.00 0.00 43.20 3.68
1391 3292 1.542915 TCACCACGTTCCTACACTAGC 59.457 52.381 0.00 0.00 0.00 3.42
1393 3294 1.544691 ACCACGTTCCTACACTAGCAG 59.455 52.381 0.00 0.00 0.00 4.24
1421 3323 7.201688 GCTTTTGCATCCTTTTTCTTTGGTTTA 60.202 33.333 0.00 0.00 46.58 2.01
1449 3351 4.349663 TTCTCCGTCAAGTTTGTGTTTG 57.650 40.909 0.00 0.00 0.00 2.93
1459 3361 7.253288 CGTCAAGTTTGTGTTTGTTATTGTGAG 60.253 37.037 0.00 0.00 0.00 3.51
1461 3363 7.967854 TCAAGTTTGTGTTTGTTATTGTGAGAG 59.032 33.333 0.00 0.00 0.00 3.20
1462 3364 7.624360 AGTTTGTGTTTGTTATTGTGAGAGA 57.376 32.000 0.00 0.00 0.00 3.10
1547 3451 1.252904 TGTGACGTGCCCCCTAGTAC 61.253 60.000 0.00 0.00 0.00 2.73
1549 3453 0.542467 TGACGTGCCCCCTAGTACAA 60.542 55.000 0.00 0.00 0.00 2.41
1550 3454 0.175073 GACGTGCCCCCTAGTACAAG 59.825 60.000 0.00 0.00 0.00 3.16
1551 3455 0.543646 ACGTGCCCCCTAGTACAAGT 60.544 55.000 0.00 0.00 0.00 3.16
1552 3456 0.108329 CGTGCCCCCTAGTACAAGTG 60.108 60.000 0.00 0.00 0.00 3.16
1553 3457 0.981943 GTGCCCCCTAGTACAAGTGT 59.018 55.000 0.00 0.00 0.00 3.55
1554 3458 1.350019 GTGCCCCCTAGTACAAGTGTT 59.650 52.381 0.00 0.00 0.00 3.32
1555 3459 2.059490 TGCCCCCTAGTACAAGTGTTT 58.941 47.619 0.00 0.00 0.00 2.83
1556 3460 2.444010 TGCCCCCTAGTACAAGTGTTTT 59.556 45.455 0.00 0.00 0.00 2.43
1557 3461 3.117436 TGCCCCCTAGTACAAGTGTTTTT 60.117 43.478 0.00 0.00 0.00 1.94
1576 3480 5.652994 TTTTTCTTTTGTGTGTGCCTAGT 57.347 34.783 0.00 0.00 0.00 2.57
1577 3481 6.761099 TTTTTCTTTTGTGTGTGCCTAGTA 57.239 33.333 0.00 0.00 0.00 1.82
1578 3482 6.952773 TTTTCTTTTGTGTGTGCCTAGTAT 57.047 33.333 0.00 0.00 0.00 2.12
1650 3554 3.063997 GCCACGTCAGTTCCATGATAAAG 59.936 47.826 0.00 0.00 0.00 1.85
1668 3572 8.383318 TGATAAAGAAAGAAAAGACAGAGTGG 57.617 34.615 0.00 0.00 0.00 4.00
1670 3574 6.442513 AAAGAAAGAAAAGACAGAGTGGTG 57.557 37.500 0.00 0.00 0.00 4.17
1675 3579 0.597637 AAAGACAGAGTGGTGCGTCG 60.598 55.000 0.00 0.00 33.56 5.12
1752 3656 8.648557 ATTGCCTTTTCTTTTGTCTAGTTTTC 57.351 30.769 0.00 0.00 0.00 2.29
1753 3657 7.404671 TGCCTTTTCTTTTGTCTAGTTTTCT 57.595 32.000 0.00 0.00 0.00 2.52
1754 3658 7.836842 TGCCTTTTCTTTTGTCTAGTTTTCTT 58.163 30.769 0.00 0.00 0.00 2.52
1762 3666 9.403583 TCTTTTGTCTAGTTTTCTTAACATGGT 57.596 29.630 0.00 0.00 0.00 3.55
1780 3684 4.665833 TGGTACAGATGTAAGCGCTTAT 57.334 40.909 30.90 18.66 31.52 1.73
1781 3685 5.777850 TGGTACAGATGTAAGCGCTTATA 57.222 39.130 30.90 28.29 31.52 0.98
1782 3686 6.340962 TGGTACAGATGTAAGCGCTTATAT 57.659 37.500 31.71 31.71 31.52 0.86
1783 3687 7.457024 TGGTACAGATGTAAGCGCTTATATA 57.543 36.000 31.42 21.63 31.52 0.86
1784 3688 7.310664 TGGTACAGATGTAAGCGCTTATATAC 58.689 38.462 31.42 25.47 31.52 1.47
1785 3689 7.040271 TGGTACAGATGTAAGCGCTTATATACA 60.040 37.037 31.42 26.79 33.24 2.29
1786 3690 7.974501 GGTACAGATGTAAGCGCTTATATACAT 59.025 37.037 31.42 29.55 40.63 2.29
1787 3691 9.999009 GTACAGATGTAAGCGCTTATATACATA 57.001 33.333 31.42 21.86 38.67 2.29
1788 3692 8.912787 ACAGATGTAAGCGCTTATATACATAC 57.087 34.615 31.42 22.93 38.67 2.39
1789 3693 7.696872 ACAGATGTAAGCGCTTATATACATACG 59.303 37.037 31.42 24.89 38.67 3.06
1790 3694 6.691818 AGATGTAAGCGCTTATATACATACGC 59.308 38.462 31.42 20.20 46.20 4.42
1799 3703 9.343103 GCGCTTATATACATACGCATATATTCT 57.657 33.333 0.00 0.00 45.25 2.40
1805 3709 7.987268 ATACATACGCATATATTCTTGGTCG 57.013 36.000 0.00 0.00 0.00 4.79
1806 3710 6.020971 ACATACGCATATATTCTTGGTCGA 57.979 37.500 0.00 0.00 0.00 4.20
1807 3711 6.631016 ACATACGCATATATTCTTGGTCGAT 58.369 36.000 0.00 0.00 0.00 3.59
1808 3712 7.097192 ACATACGCATATATTCTTGGTCGATT 58.903 34.615 0.00 0.00 0.00 3.34
1809 3713 5.845985 ACGCATATATTCTTGGTCGATTG 57.154 39.130 0.00 0.00 0.00 2.67
1810 3714 5.297547 ACGCATATATTCTTGGTCGATTGT 58.702 37.500 0.00 0.00 0.00 2.71
1828 3732 8.015087 GTCGATTGTGATTTTGTTATGTCTCAA 58.985 33.333 0.00 0.00 0.00 3.02
1830 3734 9.003112 CGATTGTGATTTTGTTATGTCTCAATC 57.997 33.333 14.27 14.27 42.38 2.67
1845 3749 7.703058 TGTCTCAATCGATGCTATATTCCTA 57.297 36.000 0.00 0.00 0.00 2.94
1854 3758 8.298729 TCGATGCTATATTCCTATCATCTTGT 57.701 34.615 0.00 0.00 0.00 3.16
1856 3760 9.457110 CGATGCTATATTCCTATCATCTTGTAC 57.543 37.037 0.00 0.00 0.00 2.90
1861 3765 5.730296 ATTCCTATCATCTTGTACGGAGG 57.270 43.478 0.00 0.00 0.00 4.30
1913 4219 2.050351 CCGTATAGTCAGCCGCCG 60.050 66.667 0.00 0.00 0.00 6.46
1969 4275 4.398044 TCGCGCTTATATAGACCATCATCA 59.602 41.667 5.56 0.00 0.00 3.07
2637 4965 2.178521 CTCGTGGTCCGGTTCGAG 59.821 66.667 18.82 18.82 42.36 4.04
2969 5304 6.609212 TCTGATAATATCCTGGCATAGACCTC 59.391 42.308 0.00 0.00 0.00 3.85
2978 5313 3.944015 CTGGCATAGACCTCTTTCAAAGG 59.056 47.826 0.00 0.00 39.96 3.11
3035 5684 3.904136 AAAGCCAAGTTGTTGATCGAG 57.096 42.857 1.45 0.00 35.46 4.04
3083 5732 4.178540 CACATATGGCTTGCCTGAAAAAG 58.821 43.478 13.18 0.00 0.00 2.27
3117 5769 8.867112 TCCTGTGAGACATATACGAAATAAAC 57.133 34.615 0.00 0.00 0.00 2.01
3118 5770 8.692710 TCCTGTGAGACATATACGAAATAAACT 58.307 33.333 0.00 0.00 0.00 2.66
3119 5771 9.961265 CCTGTGAGACATATACGAAATAAACTA 57.039 33.333 0.00 0.00 0.00 2.24
3180 5850 6.900194 TCTATTTCCCGATGAATTCTTCCTT 58.100 36.000 13.97 0.00 31.67 3.36
3189 5859 5.752955 CGATGAATTCTTCCTTCTTCTCCTC 59.247 44.000 13.97 0.00 0.00 3.71
3208 5878 2.432510 CTCTACCATCTCCCAACTGTCC 59.567 54.545 0.00 0.00 0.00 4.02
3247 5917 0.323725 GGTGCCTCCCATGTGTTGAT 60.324 55.000 0.00 0.00 0.00 2.57
3256 5926 1.676916 CCATGTGTTGATGTCGCTCCT 60.677 52.381 0.00 0.00 0.00 3.69
3313 5984 1.666553 GACGTTGCCACATCGACCA 60.667 57.895 5.17 0.00 31.97 4.02
3341 6012 4.664677 CGGGGGCGCTTCTATCCG 62.665 72.222 7.64 8.21 0.00 4.18
3346 6017 1.521681 GGCGCTTCTATCCGTTGCT 60.522 57.895 7.64 0.00 0.00 3.91
3420 6097 6.099341 GGAAAGAAAGTTTCAAGCAACTGAA 58.901 36.000 17.65 0.00 37.07 3.02
3423 6100 6.515272 AGAAAGTTTCAAGCAACTGAAGAA 57.485 33.333 17.65 0.00 37.07 2.52
3535 6214 3.603158 TTTGTACGAGGCTATGAGCAA 57.397 42.857 0.21 0.00 44.75 3.91
3557 6236 6.572509 GCAATATACTCTTAGCTCGGGAATGA 60.573 42.308 0.00 0.00 0.00 2.57
3564 6243 4.162320 TCTTAGCTCGGGAATGATTTGAGT 59.838 41.667 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 0.545787 CCTACCCTACACCACACCCA 60.546 60.000 0.00 0.00 0.00 4.51
42 43 1.985662 CGCCCTACCCTACACCACA 60.986 63.158 0.00 0.00 0.00 4.17
60 61 1.448013 GCCACTTGCTAGACGGGAC 60.448 63.158 1.04 0.00 36.87 4.46
61 62 2.656069 GGCCACTTGCTAGACGGGA 61.656 63.158 0.00 0.00 40.92 5.14
62 63 2.125106 GGCCACTTGCTAGACGGG 60.125 66.667 0.00 1.79 40.92 5.28
63 64 2.662596 TGGCCACTTGCTAGACGG 59.337 61.111 0.00 3.18 40.92 4.79
134 135 4.580167 AGTGCTTGTGTCTGATGCTAAAAA 59.420 37.500 0.00 0.00 0.00 1.94
135 136 4.136796 AGTGCTTGTGTCTGATGCTAAAA 58.863 39.130 0.00 0.00 0.00 1.52
136 137 3.743521 AGTGCTTGTGTCTGATGCTAAA 58.256 40.909 0.00 0.00 0.00 1.85
137 138 3.244181 TGAGTGCTTGTGTCTGATGCTAA 60.244 43.478 0.00 0.00 0.00 3.09
138 139 2.299867 TGAGTGCTTGTGTCTGATGCTA 59.700 45.455 0.00 0.00 0.00 3.49
139 140 1.071228 TGAGTGCTTGTGTCTGATGCT 59.929 47.619 0.00 0.00 0.00 3.79
140 141 1.516161 TGAGTGCTTGTGTCTGATGC 58.484 50.000 0.00 0.00 0.00 3.91
141 142 6.044682 TGTATATGAGTGCTTGTGTCTGATG 58.955 40.000 0.00 0.00 0.00 3.07
142 143 6.225981 TGTATATGAGTGCTTGTGTCTGAT 57.774 37.500 0.00 0.00 0.00 2.90
143 144 5.659440 TGTATATGAGTGCTTGTGTCTGA 57.341 39.130 0.00 0.00 0.00 3.27
144 145 5.277202 GCATGTATATGAGTGCTTGTGTCTG 60.277 44.000 3.28 0.00 36.36 3.51
145 146 4.813161 GCATGTATATGAGTGCTTGTGTCT 59.187 41.667 3.28 0.00 36.36 3.41
146 147 4.318333 CGCATGTATATGAGTGCTTGTGTC 60.318 45.833 3.28 0.00 36.36 3.67
147 148 3.557185 CGCATGTATATGAGTGCTTGTGT 59.443 43.478 3.28 0.00 36.36 3.72
148 149 3.605461 GCGCATGTATATGAGTGCTTGTG 60.605 47.826 0.30 0.00 36.59 3.33
149 150 2.545526 GCGCATGTATATGAGTGCTTGT 59.454 45.455 0.30 0.00 36.59 3.16
150 151 2.545106 TGCGCATGTATATGAGTGCTTG 59.455 45.455 5.66 0.00 36.59 4.01
151 152 2.837498 TGCGCATGTATATGAGTGCTT 58.163 42.857 5.66 0.00 36.59 3.91
152 153 2.531522 TGCGCATGTATATGAGTGCT 57.468 45.000 5.66 0.00 36.59 4.40
153 154 3.679502 TGTATGCGCATGTATATGAGTGC 59.320 43.478 32.48 7.31 36.59 4.40
154 155 4.925646 AGTGTATGCGCATGTATATGAGTG 59.074 41.667 32.48 0.00 36.59 3.51
155 156 5.139435 AGTGTATGCGCATGTATATGAGT 57.861 39.130 32.48 5.52 36.59 3.41
156 157 5.061435 GTGAGTGTATGCGCATGTATATGAG 59.939 44.000 32.48 0.87 36.36 2.90
157 158 4.923281 GTGAGTGTATGCGCATGTATATGA 59.077 41.667 32.48 8.02 36.36 2.15
158 159 4.091945 GGTGAGTGTATGCGCATGTATATG 59.908 45.833 32.48 0.00 37.36 1.78
159 160 4.245660 GGTGAGTGTATGCGCATGTATAT 58.754 43.478 32.48 14.31 0.00 0.86
160 161 3.554129 GGGTGAGTGTATGCGCATGTATA 60.554 47.826 32.48 10.12 0.00 1.47
161 162 2.483876 GGTGAGTGTATGCGCATGTAT 58.516 47.619 32.48 15.41 0.00 2.29
162 163 1.472552 GGGTGAGTGTATGCGCATGTA 60.473 52.381 32.48 17.97 0.00 2.29
163 164 0.744414 GGGTGAGTGTATGCGCATGT 60.744 55.000 32.48 11.40 0.00 3.21
164 165 0.462581 AGGGTGAGTGTATGCGCATG 60.463 55.000 32.48 0.00 0.00 4.06
165 166 0.253044 AAGGGTGAGTGTATGCGCAT 59.747 50.000 28.23 28.23 0.00 4.73
166 167 0.899019 TAAGGGTGAGTGTATGCGCA 59.101 50.000 14.96 14.96 0.00 6.09
167 168 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
168 169 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
169 170 3.555956 CGTTCATAAGGGTGAGTGTATGC 59.444 47.826 0.00 0.00 0.00 3.14
170 171 4.566759 CACGTTCATAAGGGTGAGTGTATG 59.433 45.833 0.00 0.00 32.23 2.39
171 172 4.222145 ACACGTTCATAAGGGTGAGTGTAT 59.778 41.667 0.00 0.00 36.40 2.29
172 173 3.575256 ACACGTTCATAAGGGTGAGTGTA 59.425 43.478 0.00 0.00 36.40 2.90
173 174 2.367567 ACACGTTCATAAGGGTGAGTGT 59.632 45.455 0.00 0.00 34.56 3.55
174 175 3.040147 ACACGTTCATAAGGGTGAGTG 57.960 47.619 0.00 0.00 33.16 3.51
175 176 3.575256 TGTACACGTTCATAAGGGTGAGT 59.425 43.478 0.00 0.00 34.59 3.41
176 177 3.924686 GTGTACACGTTCATAAGGGTGAG 59.075 47.826 10.84 0.00 34.59 3.51
177 178 3.916761 GTGTACACGTTCATAAGGGTGA 58.083 45.455 10.84 0.00 34.59 4.02
192 193 0.599558 GAGTAGGGTGTGCGTGTACA 59.400 55.000 0.00 0.00 0.00 2.90
193 194 0.108945 GGAGTAGGGTGTGCGTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
194 195 0.251474 AGGAGTAGGGTGTGCGTGTA 60.251 55.000 0.00 0.00 0.00 2.90
195 196 0.251474 TAGGAGTAGGGTGTGCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
196 197 1.112113 ATAGGAGTAGGGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
197 198 1.112113 CATAGGAGTAGGGTGTGCGT 58.888 55.000 0.00 0.00 0.00 5.24
198 199 1.399714 TCATAGGAGTAGGGTGTGCG 58.600 55.000 0.00 0.00 0.00 5.34
199 200 4.262506 GGTATTCATAGGAGTAGGGTGTGC 60.263 50.000 0.00 0.00 0.00 4.57
200 201 5.148502 AGGTATTCATAGGAGTAGGGTGTG 58.851 45.833 0.00 0.00 0.00 3.82
201 202 5.136392 AGAGGTATTCATAGGAGTAGGGTGT 59.864 44.000 0.00 0.00 0.00 4.16
202 203 5.478679 CAGAGGTATTCATAGGAGTAGGGTG 59.521 48.000 0.00 0.00 0.00 4.61
203 204 5.375956 TCAGAGGTATTCATAGGAGTAGGGT 59.624 44.000 0.00 0.00 0.00 4.34
204 205 5.893500 TCAGAGGTATTCATAGGAGTAGGG 58.106 45.833 0.00 0.00 0.00 3.53
205 206 6.785076 TCTCAGAGGTATTCATAGGAGTAGG 58.215 44.000 0.00 0.00 0.00 3.18
206 207 7.606456 GTCTCTCAGAGGTATTCATAGGAGTAG 59.394 44.444 0.57 0.00 0.00 2.57
207 208 7.455058 GTCTCTCAGAGGTATTCATAGGAGTA 58.545 42.308 0.57 0.00 0.00 2.59
208 209 6.303839 GTCTCTCAGAGGTATTCATAGGAGT 58.696 44.000 0.57 0.00 0.00 3.85
209 210 5.710099 GGTCTCTCAGAGGTATTCATAGGAG 59.290 48.000 0.57 0.00 0.00 3.69
210 211 5.134509 TGGTCTCTCAGAGGTATTCATAGGA 59.865 44.000 0.57 0.00 0.00 2.94
211 212 5.389520 TGGTCTCTCAGAGGTATTCATAGG 58.610 45.833 0.57 0.00 0.00 2.57
212 213 6.516527 GCTTGGTCTCTCAGAGGTATTCATAG 60.517 46.154 0.57 0.00 0.00 2.23
213 214 5.303078 GCTTGGTCTCTCAGAGGTATTCATA 59.697 44.000 0.57 0.00 0.00 2.15
214 215 4.100808 GCTTGGTCTCTCAGAGGTATTCAT 59.899 45.833 0.57 0.00 0.00 2.57
215 216 3.449018 GCTTGGTCTCTCAGAGGTATTCA 59.551 47.826 0.57 0.00 0.00 2.57
216 217 3.181470 GGCTTGGTCTCTCAGAGGTATTC 60.181 52.174 0.57 0.00 0.00 1.75
217 218 2.769095 GGCTTGGTCTCTCAGAGGTATT 59.231 50.000 0.57 0.00 0.00 1.89
218 219 2.393646 GGCTTGGTCTCTCAGAGGTAT 58.606 52.381 0.57 0.00 0.00 2.73
219 220 1.853963 GGCTTGGTCTCTCAGAGGTA 58.146 55.000 0.57 0.00 0.00 3.08
220 221 1.254284 CGGCTTGGTCTCTCAGAGGT 61.254 60.000 0.57 0.00 0.00 3.85
221 222 0.967887 TCGGCTTGGTCTCTCAGAGG 60.968 60.000 0.57 0.00 0.00 3.69
222 223 0.172352 GTCGGCTTGGTCTCTCAGAG 59.828 60.000 0.00 0.00 0.00 3.35
223 224 0.539669 TGTCGGCTTGGTCTCTCAGA 60.540 55.000 0.00 0.00 0.00 3.27
224 225 0.534412 ATGTCGGCTTGGTCTCTCAG 59.466 55.000 0.00 0.00 0.00 3.35
225 226 1.847328 TATGTCGGCTTGGTCTCTCA 58.153 50.000 0.00 0.00 0.00 3.27
226 227 2.362397 TGATATGTCGGCTTGGTCTCTC 59.638 50.000 0.00 0.00 0.00 3.20
227 228 2.388735 TGATATGTCGGCTTGGTCTCT 58.611 47.619 0.00 0.00 0.00 3.10
228 229 2.890808 TGATATGTCGGCTTGGTCTC 57.109 50.000 0.00 0.00 0.00 3.36
229 230 2.968574 AGATGATATGTCGGCTTGGTCT 59.031 45.455 0.00 0.00 0.00 3.85
230 231 3.393089 AGATGATATGTCGGCTTGGTC 57.607 47.619 0.00 0.00 0.00 4.02
231 232 3.134623 TCAAGATGATATGTCGGCTTGGT 59.865 43.478 17.74 0.00 38.04 3.67
232 233 3.732212 TCAAGATGATATGTCGGCTTGG 58.268 45.455 17.74 6.07 38.04 3.61
233 234 4.024556 GGTTCAAGATGATATGTCGGCTTG 60.025 45.833 14.09 14.09 38.45 4.01
234 235 4.130118 GGTTCAAGATGATATGTCGGCTT 58.870 43.478 0.00 0.00 0.00 4.35
235 236 3.389329 AGGTTCAAGATGATATGTCGGCT 59.611 43.478 0.00 0.00 0.00 5.52
236 237 3.733337 AGGTTCAAGATGATATGTCGGC 58.267 45.455 0.00 0.00 0.00 5.54
237 238 4.512944 CCAAGGTTCAAGATGATATGTCGG 59.487 45.833 0.00 0.00 0.00 4.79
238 239 5.007039 CACCAAGGTTCAAGATGATATGTCG 59.993 44.000 0.00 0.00 0.00 4.35
239 240 5.297776 CCACCAAGGTTCAAGATGATATGTC 59.702 44.000 0.00 0.00 0.00 3.06
240 241 5.195940 CCACCAAGGTTCAAGATGATATGT 58.804 41.667 0.00 0.00 0.00 2.29
241 242 4.581824 CCCACCAAGGTTCAAGATGATATG 59.418 45.833 0.00 0.00 34.66 1.78
242 243 4.230502 ACCCACCAAGGTTCAAGATGATAT 59.769 41.667 0.00 0.00 36.44 1.63
243 244 3.591527 ACCCACCAAGGTTCAAGATGATA 59.408 43.478 0.00 0.00 36.44 2.15
244 245 2.379907 ACCCACCAAGGTTCAAGATGAT 59.620 45.455 0.00 0.00 36.44 2.45
245 246 1.780309 ACCCACCAAGGTTCAAGATGA 59.220 47.619 0.00 0.00 36.44 2.92
246 247 2.292828 ACCCACCAAGGTTCAAGATG 57.707 50.000 0.00 0.00 36.44 2.90
254 255 0.478789 TATCCCCAACCCACCAAGGT 60.479 55.000 0.00 0.00 44.00 3.50
255 256 0.033503 GTATCCCCAACCCACCAAGG 60.034 60.000 0.00 0.00 37.03 3.61
256 257 0.033503 GGTATCCCCAACCCACCAAG 60.034 60.000 0.00 0.00 0.00 3.61
257 258 0.776479 TGGTATCCCCAACCCACCAA 60.776 55.000 0.00 0.00 41.50 3.67
258 259 1.151565 TGGTATCCCCAACCCACCA 60.152 57.895 0.00 0.00 41.50 4.17
259 260 3.844063 TGGTATCCCCAACCCACC 58.156 61.111 0.00 0.00 41.50 4.61
267 268 1.222567 AGGTGGACAATGGTATCCCC 58.777 55.000 0.00 0.00 33.69 4.81
268 269 3.434596 GGTTAGGTGGACAATGGTATCCC 60.435 52.174 0.00 0.00 33.69 3.85
269 270 3.201266 TGGTTAGGTGGACAATGGTATCC 59.799 47.826 0.00 0.00 35.37 2.59
270 271 4.497291 TGGTTAGGTGGACAATGGTATC 57.503 45.455 0.00 0.00 0.00 2.24
271 272 4.726825 AGATGGTTAGGTGGACAATGGTAT 59.273 41.667 0.00 0.00 0.00 2.73
272 273 4.108570 AGATGGTTAGGTGGACAATGGTA 58.891 43.478 0.00 0.00 0.00 3.25
273 274 2.919602 AGATGGTTAGGTGGACAATGGT 59.080 45.455 0.00 0.00 0.00 3.55
274 275 3.054434 TGAGATGGTTAGGTGGACAATGG 60.054 47.826 0.00 0.00 0.00 3.16
275 276 4.220693 TGAGATGGTTAGGTGGACAATG 57.779 45.455 0.00 0.00 0.00 2.82
276 277 4.927267 TTGAGATGGTTAGGTGGACAAT 57.073 40.909 0.00 0.00 0.00 2.71
277 278 4.288366 TGATTGAGATGGTTAGGTGGACAA 59.712 41.667 0.00 0.00 0.00 3.18
278 279 3.843619 TGATTGAGATGGTTAGGTGGACA 59.156 43.478 0.00 0.00 0.00 4.02
279 280 4.192317 GTGATTGAGATGGTTAGGTGGAC 58.808 47.826 0.00 0.00 0.00 4.02
280 281 3.843619 TGTGATTGAGATGGTTAGGTGGA 59.156 43.478 0.00 0.00 0.00 4.02
281 282 4.220693 TGTGATTGAGATGGTTAGGTGG 57.779 45.455 0.00 0.00 0.00 4.61
282 283 5.188434 ACATGTGATTGAGATGGTTAGGTG 58.812 41.667 0.00 0.00 29.21 4.00
283 284 5.190528 AGACATGTGATTGAGATGGTTAGGT 59.809 40.000 1.15 0.00 29.21 3.08
284 285 5.678583 AGACATGTGATTGAGATGGTTAGG 58.321 41.667 1.15 0.00 29.21 2.69
285 286 7.621428 AAAGACATGTGATTGAGATGGTTAG 57.379 36.000 1.15 0.00 29.21 2.34
286 287 8.408043 AAAAAGACATGTGATTGAGATGGTTA 57.592 30.769 1.15 0.00 29.21 2.85
287 288 6.906157 AAAAGACATGTGATTGAGATGGTT 57.094 33.333 1.15 0.00 29.21 3.67
288 289 6.906157 AAAAAGACATGTGATTGAGATGGT 57.094 33.333 1.15 0.00 29.21 3.55
370 2031 9.869844 GCTCAAAGCATTGTAATAATACAGTAG 57.130 33.333 1.04 0.00 41.03 2.57
389 2050 3.750130 ACAGTGCAGTAAGATGCTCAAAG 59.250 43.478 0.00 0.00 46.63 2.77
399 2060 3.381045 TCAAACGAGACAGTGCAGTAAG 58.619 45.455 0.00 0.00 0.00 2.34
405 2077 1.126846 CGGATTCAAACGAGACAGTGC 59.873 52.381 0.00 0.00 0.00 4.40
420 2093 1.066215 TCTGTACTGTGCATGCGGATT 60.066 47.619 14.09 0.00 0.00 3.01
489 2188 1.539388 TGGTTCATGGACGCATTGTTC 59.461 47.619 0.00 0.00 0.00 3.18
504 2203 2.548920 GGAGACCGATGGATCATGGTTC 60.549 54.545 0.00 0.00 34.12 3.62
505 2204 1.417890 GGAGACCGATGGATCATGGTT 59.582 52.381 0.00 0.00 34.12 3.67
507 2206 3.923354 GGAGACCGATGGATCATGG 57.077 57.895 0.00 0.00 0.00 3.66
607 2306 1.592669 CATCAGACGGCCGGTGATC 60.593 63.158 31.52 20.73 0.00 2.92
721 2593 1.219124 CTGAGCTAAGCGGGCAGAA 59.781 57.895 0.00 0.00 32.22 3.02
746 2618 2.910345 GCTAGGGCGAGCTACCGAG 61.910 68.421 0.00 3.47 39.50 4.63
747 2619 2.905880 GCTAGGGCGAGCTACCGA 60.906 66.667 0.00 0.00 39.50 4.69
759 2632 3.774528 TGGCCACGCTGAGCTAGG 61.775 66.667 0.00 5.20 0.00 3.02
786 2659 4.117661 GCTCGTTCGAGCGGGAGT 62.118 66.667 26.43 0.00 46.28 3.85
841 2714 2.152830 GGCATGAGATTGAGGATGAGC 58.847 52.381 0.00 0.00 0.00 4.26
851 2724 0.251354 ACGCACAGAGGCATGAGATT 59.749 50.000 0.00 0.00 0.00 2.40
863 2743 2.852413 GCCGCTATATATACACGCACAG 59.148 50.000 5.32 0.00 0.00 3.66
891 2775 0.237761 CGAGTTCGACTTCACGAGGT 59.762 55.000 0.00 0.00 43.04 3.85
903 2787 0.171455 AGCTGGCTAGTTCGAGTTCG 59.829 55.000 0.00 0.00 41.45 3.95
927 2815 5.489792 TCAAAGTACTCTCAGCTTGGATT 57.510 39.130 0.00 0.00 0.00 3.01
973 2865 4.403976 GATCGTTCGAGTGGCTCC 57.596 61.111 0.80 0.00 0.00 4.70
1300 3201 2.508891 GCGACCGCAATGAGTCTCG 61.509 63.158 9.73 0.87 41.49 4.04
1354 3255 2.591715 ACACCGACCTGCAACTGC 60.592 61.111 0.00 0.00 42.50 4.40
1355 3256 1.227527 TGACACCGACCTGCAACTG 60.228 57.895 0.00 0.00 0.00 3.16
1356 3257 1.227556 GTGACACCGACCTGCAACT 60.228 57.895 0.00 0.00 0.00 3.16
1357 3258 2.251642 GGTGACACCGACCTGCAAC 61.252 63.158 9.33 0.00 0.00 4.17
1391 3292 1.787012 AAAAGGATGCAAAAGCGCTG 58.213 45.000 12.58 0.00 0.00 5.18
1393 3294 2.407090 AGAAAAAGGATGCAAAAGCGC 58.593 42.857 0.00 0.00 0.00 5.92
1411 3313 7.102847 ACGGAGAAAACAAATAAACCAAAGA 57.897 32.000 0.00 0.00 0.00 2.52
1421 3323 5.804979 CACAAACTTGACGGAGAAAACAAAT 59.195 36.000 0.00 0.00 0.00 2.32
1430 3332 3.757745 ACAAACACAAACTTGACGGAG 57.242 42.857 0.00 0.00 0.00 4.63
1449 3351 3.000322 CGCCGAACATCTCTCACAATAAC 60.000 47.826 0.00 0.00 0.00 1.89
1459 3361 1.349627 CATGCACGCCGAACATCTC 59.650 57.895 0.00 0.00 0.00 2.75
1461 3363 1.226101 CACATGCACGCCGAACATC 60.226 57.895 0.00 0.00 0.00 3.06
1462 3364 1.514678 AACACATGCACGCCGAACAT 61.515 50.000 0.00 0.00 0.00 2.71
1554 3458 5.652994 ACTAGGCACACACAAAAGAAAAA 57.347 34.783 0.00 0.00 0.00 1.94
1555 3459 6.952773 ATACTAGGCACACACAAAAGAAAA 57.047 33.333 0.00 0.00 0.00 2.29
1556 3460 7.172532 CACTATACTAGGCACACACAAAAGAAA 59.827 37.037 0.00 0.00 0.00 2.52
1557 3461 6.649141 CACTATACTAGGCACACACAAAAGAA 59.351 38.462 0.00 0.00 0.00 2.52
1558 3462 6.163476 CACTATACTAGGCACACACAAAAGA 58.837 40.000 0.00 0.00 0.00 2.52
1559 3463 5.932303 ACACTATACTAGGCACACACAAAAG 59.068 40.000 0.00 0.00 0.00 2.27
1560 3464 5.860611 ACACTATACTAGGCACACACAAAA 58.139 37.500 0.00 0.00 0.00 2.44
1561 3465 5.477607 ACACTATACTAGGCACACACAAA 57.522 39.130 0.00 0.00 0.00 2.83
1562 3466 5.245301 AGAACACTATACTAGGCACACACAA 59.755 40.000 0.00 0.00 0.00 3.33
1563 3467 4.770531 AGAACACTATACTAGGCACACACA 59.229 41.667 0.00 0.00 0.00 3.72
1564 3468 5.103000 CAGAACACTATACTAGGCACACAC 58.897 45.833 0.00 0.00 0.00 3.82
1565 3469 4.159693 CCAGAACACTATACTAGGCACACA 59.840 45.833 0.00 0.00 0.00 3.72
1566 3470 4.159879 ACCAGAACACTATACTAGGCACAC 59.840 45.833 0.00 0.00 0.00 3.82
1567 3471 4.159693 CACCAGAACACTATACTAGGCACA 59.840 45.833 0.00 0.00 0.00 4.57
1568 3472 4.159879 ACACCAGAACACTATACTAGGCAC 59.840 45.833 0.00 0.00 0.00 5.01
1569 3473 4.159693 CACACCAGAACACTATACTAGGCA 59.840 45.833 0.00 0.00 0.00 4.75
1570 3474 4.159879 ACACACCAGAACACTATACTAGGC 59.840 45.833 0.00 0.00 0.00 3.93
1571 3475 5.916661 ACACACCAGAACACTATACTAGG 57.083 43.478 0.00 0.00 0.00 3.02
1572 3476 6.071560 TGGAACACACCAGAACACTATACTAG 60.072 42.308 0.00 0.00 34.77 2.57
1573 3477 5.776208 TGGAACACACCAGAACACTATACTA 59.224 40.000 0.00 0.00 34.77 1.82
1574 3478 4.591498 TGGAACACACCAGAACACTATACT 59.409 41.667 0.00 0.00 34.77 2.12
1575 3479 4.890088 TGGAACACACCAGAACACTATAC 58.110 43.478 0.00 0.00 34.77 1.47
1650 3554 3.303395 CGCACCACTCTGTCTTTTCTTTC 60.303 47.826 0.00 0.00 0.00 2.62
1668 3572 3.712881 GCAGTGGTTCCGACGCAC 61.713 66.667 0.00 0.00 0.00 5.34
1670 3574 4.980805 TGGCAGTGGTTCCGACGC 62.981 66.667 0.00 0.00 0.00 5.19
1675 3579 1.514087 CATGCATGGCAGTGGTTCC 59.486 57.895 19.40 0.00 43.65 3.62
1740 3644 9.268268 CTGTACCATGTTAAGAAAACTAGACAA 57.732 33.333 0.00 0.00 0.00 3.18
1752 3656 5.276868 GCGCTTACATCTGTACCATGTTAAG 60.277 44.000 11.65 12.62 35.95 1.85
1753 3657 4.569162 GCGCTTACATCTGTACCATGTTAA 59.431 41.667 11.65 5.41 35.95 2.01
1754 3658 4.116961 GCGCTTACATCTGTACCATGTTA 58.883 43.478 11.65 3.94 35.95 2.41
1757 3661 2.826428 AGCGCTTACATCTGTACCATG 58.174 47.619 2.64 0.00 0.00 3.66
1758 3662 3.543680 AAGCGCTTACATCTGTACCAT 57.456 42.857 23.72 0.00 0.00 3.55
1759 3663 4.665833 ATAAGCGCTTACATCTGTACCA 57.334 40.909 30.92 7.68 0.00 3.25
1760 3664 7.310664 TGTATATAAGCGCTTACATCTGTACC 58.689 38.462 30.92 12.98 0.00 3.34
1761 3665 8.912787 ATGTATATAAGCGCTTACATCTGTAC 57.087 34.615 30.92 24.23 31.37 2.90
1762 3666 9.999009 GTATGTATATAAGCGCTTACATCTGTA 57.001 33.333 29.84 19.63 36.80 2.74
1763 3667 7.696872 CGTATGTATATAAGCGCTTACATCTGT 59.303 37.037 29.84 18.32 36.80 3.41
1764 3668 7.305475 GCGTATGTATATAAGCGCTTACATCTG 60.305 40.741 29.84 24.44 41.37 2.90
1768 3672 5.701855 TGCGTATGTATATAAGCGCTTACA 58.298 37.500 30.92 26.01 44.12 2.41
1769 3673 6.807708 ATGCGTATGTATATAAGCGCTTAC 57.192 37.500 30.92 21.32 44.12 2.34
1772 3676 9.343103 GAATATATGCGTATGTATATAAGCGCT 57.657 33.333 2.64 2.64 44.12 5.92
1773 3677 9.343103 AGAATATATGCGTATGTATATAAGCGC 57.657 33.333 14.39 0.00 44.12 5.92
1779 3683 9.678941 CGACCAAGAATATATGCGTATGTATAT 57.321 33.333 8.77 10.01 37.23 0.86
1780 3684 8.895737 TCGACCAAGAATATATGCGTATGTATA 58.104 33.333 8.77 0.00 0.00 1.47
1781 3685 7.768240 TCGACCAAGAATATATGCGTATGTAT 58.232 34.615 8.77 0.00 0.00 2.29
1782 3686 7.148355 TCGACCAAGAATATATGCGTATGTA 57.852 36.000 8.77 0.00 0.00 2.29
1783 3687 6.020971 TCGACCAAGAATATATGCGTATGT 57.979 37.500 8.77 0.00 0.00 2.29
1784 3688 7.063426 ACAATCGACCAAGAATATATGCGTATG 59.937 37.037 8.77 0.00 0.00 2.39
1785 3689 7.063426 CACAATCGACCAAGAATATATGCGTAT 59.937 37.037 3.47 3.47 0.00 3.06
1786 3690 6.364976 CACAATCGACCAAGAATATATGCGTA 59.635 38.462 0.00 0.00 0.00 4.42
1787 3691 5.177511 CACAATCGACCAAGAATATATGCGT 59.822 40.000 0.00 0.00 0.00 5.24
1788 3692 5.405269 TCACAATCGACCAAGAATATATGCG 59.595 40.000 0.00 0.00 0.00 4.73
1789 3693 6.785488 TCACAATCGACCAAGAATATATGC 57.215 37.500 0.00 0.00 0.00 3.14
1792 3696 9.173021 ACAAAATCACAATCGACCAAGAATATA 57.827 29.630 0.00 0.00 0.00 0.86
1793 3697 8.055279 ACAAAATCACAATCGACCAAGAATAT 57.945 30.769 0.00 0.00 0.00 1.28
1794 3698 7.447374 ACAAAATCACAATCGACCAAGAATA 57.553 32.000 0.00 0.00 0.00 1.75
1795 3699 6.331369 ACAAAATCACAATCGACCAAGAAT 57.669 33.333 0.00 0.00 0.00 2.40
1796 3700 5.766150 ACAAAATCACAATCGACCAAGAA 57.234 34.783 0.00 0.00 0.00 2.52
1797 3701 5.766150 AACAAAATCACAATCGACCAAGA 57.234 34.783 0.00 0.00 0.00 3.02
1798 3702 7.083858 ACATAACAAAATCACAATCGACCAAG 58.916 34.615 0.00 0.00 0.00 3.61
1799 3703 6.976088 ACATAACAAAATCACAATCGACCAA 58.024 32.000 0.00 0.00 0.00 3.67
1800 3704 6.429692 AGACATAACAAAATCACAATCGACCA 59.570 34.615 0.00 0.00 0.00 4.02
1801 3705 6.842163 AGACATAACAAAATCACAATCGACC 58.158 36.000 0.00 0.00 0.00 4.79
1802 3706 7.518161 TGAGACATAACAAAATCACAATCGAC 58.482 34.615 0.00 0.00 0.00 4.20
1803 3707 7.665561 TGAGACATAACAAAATCACAATCGA 57.334 32.000 0.00 0.00 0.00 3.59
1804 3708 8.900511 ATTGAGACATAACAAAATCACAATCG 57.099 30.769 0.00 0.00 29.83 3.34
1805 3709 9.003112 CGATTGAGACATAACAAAATCACAATC 57.997 33.333 0.00 0.00 41.65 2.67
1806 3710 8.729756 TCGATTGAGACATAACAAAATCACAAT 58.270 29.630 0.00 0.00 35.81 2.71
1807 3711 8.093659 TCGATTGAGACATAACAAAATCACAA 57.906 30.769 0.00 0.00 0.00 3.33
1808 3712 7.665561 TCGATTGAGACATAACAAAATCACA 57.334 32.000 0.00 0.00 0.00 3.58
1809 3713 7.164826 GCATCGATTGAGACATAACAAAATCAC 59.835 37.037 0.00 0.00 0.00 3.06
1810 3714 7.066163 AGCATCGATTGAGACATAACAAAATCA 59.934 33.333 0.00 0.00 0.00 2.57
1816 3720 9.358872 GAATATAGCATCGATTGAGACATAACA 57.641 33.333 0.00 0.00 0.00 2.41
1845 3749 6.479972 TTATGAACCTCCGTACAAGATGAT 57.520 37.500 0.00 0.00 0.00 2.45
1856 3760 8.911662 CACTTATTTTTGTTTTATGAACCTCCG 58.088 33.333 0.00 0.00 0.00 4.63
1913 4219 4.158384 CGCACCATTTGACTGTATGAAAC 58.842 43.478 0.00 0.00 0.00 2.78
1969 4275 1.406614 CCTGCCGAGCAAGAAGAAGAT 60.407 52.381 0.35 0.00 38.41 2.40
2452 4765 0.038744 AGTAGGACCCCGAAGACGAA 59.961 55.000 0.00 0.00 42.66 3.85
2518 4846 0.179134 CGTAACCCGAAGCAGAGGAG 60.179 60.000 0.00 0.00 39.56 3.69
2704 5033 1.073923 AGCTTTCCCAGTGTTACAGGG 59.926 52.381 3.51 3.51 45.48 4.45
2807 5139 2.503331 TGAACATTACAGTGCTGTGGG 58.497 47.619 14.44 6.63 44.63 4.61
2937 5272 5.884232 TGCCAGGATATTATCAGATCATTGC 59.116 40.000 6.04 0.00 0.00 3.56
3035 5684 5.859495 TCCAATTTTGGTCCATTTTACCAC 58.141 37.500 9.09 0.00 46.56 4.16
3083 5732 7.644551 CGTATATGTCTCACAGGAGTAGTTTTC 59.355 40.741 0.00 0.00 42.05 2.29
3143 5813 9.664332 CATCGGGAAATAGAGAAATAAGATGAT 57.336 33.333 0.00 0.00 34.31 2.45
3180 5850 2.859404 TGGGAGATGGTAGAGGAGAAGA 59.141 50.000 0.00 0.00 0.00 2.87
3189 5859 1.137086 CGGACAGTTGGGAGATGGTAG 59.863 57.143 0.00 0.00 0.00 3.18
3247 5917 0.760567 ATAGATGGCCAGGAGCGACA 60.761 55.000 13.05 0.00 45.17 4.35
3256 5926 1.788229 TCGAGGTTGATAGATGGCCA 58.212 50.000 8.56 8.56 0.00 5.36
3313 5984 2.764547 GCCCCCGAAGTAGCTCCT 60.765 66.667 0.00 0.00 0.00 3.69
3420 6097 5.722021 ATTTTGGTCGGTTTTGCTATTCT 57.278 34.783 0.00 0.00 0.00 2.40
3423 6100 6.930731 ACATAATTTTGGTCGGTTTTGCTAT 58.069 32.000 0.89 0.00 0.00 2.97
3505 6184 2.292292 GCCTCGTACAAAAGAGCCAAAA 59.708 45.455 0.00 0.00 33.39 2.44
3535 6214 7.726033 AATCATTCCCGAGCTAAGAGTATAT 57.274 36.000 0.00 0.00 0.00 0.86
3557 6236 4.334203 TGTTACGACTTGCAACACTCAAAT 59.666 37.500 0.00 0.00 0.00 2.32
3564 6243 1.134340 ACCCTGTTACGACTTGCAACA 60.134 47.619 0.00 0.00 0.00 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.