Multiple sequence alignment - TraesCS1A01G270400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G270400 chr1A 100.000 5008 0 0 1 5008 464789745 464794752 0.000000e+00 9249
1 TraesCS1A01G270400 chr1D 91.269 4169 242 50 9 4130 365533031 365537124 0.000000e+00 5570
2 TraesCS1A01G270400 chr1D 82.776 598 86 8 9 594 365526434 365527026 7.430000e-143 518
3 TraesCS1A01G270400 chr1D 80.967 641 100 13 9 635 365530741 365531373 5.830000e-134 488
4 TraesCS1A01G270400 chr1D 91.406 128 6 2 4146 4273 365537304 365537426 2.400000e-38 171
5 TraesCS1A01G270400 chr1D 95.833 96 4 0 4913 5008 365540236 365540331 6.710000e-34 156
6 TraesCS1A01G270400 chr1D 85.455 110 5 5 4822 4920 365540108 365540217 2.470000e-18 104
7 TraesCS1A01G270400 chr1B 93.897 3490 143 32 868 4306 489131138 489134608 0.000000e+00 5201
8 TraesCS1A01G270400 chr1B 80.432 741 104 25 1 709 489130294 489131025 1.230000e-145 527
9 TraesCS1A01G270400 chr1B 93.048 187 13 0 4822 5008 489198568 489198754 1.780000e-69 274
10 TraesCS1A01G270400 chr1B 78.133 407 74 8 4425 4821 551184700 551185101 1.390000e-60 244
11 TraesCS1A01G270400 chr1B 79.339 363 63 10 4445 4802 635436780 635437135 1.390000e-60 244
12 TraesCS1A01G270400 chrUn 80.526 380 65 8 4427 4802 286248458 286248832 2.950000e-72 283
13 TraesCS1A01G270400 chrUn 80.526 380 65 8 4427 4802 291302315 291301941 2.950000e-72 283
14 TraesCS1A01G270400 chrUn 80.157 383 65 7 4425 4802 2576669 2576293 4.940000e-70 276
15 TraesCS1A01G270400 chr3B 80.526 380 65 8 4427 4802 5451529 5451903 2.950000e-72 283
16 TraesCS1A01G270400 chr3B 79.896 383 66 7 4425 4802 554961155 554961531 2.300000e-68 270
17 TraesCS1A01G270400 chr3B 77.250 400 62 19 3631 4021 779198652 779198273 1.830000e-49 207
18 TraesCS1A01G270400 chr4B 79.634 383 67 9 4425 4802 654981850 654982226 1.070000e-66 265
19 TraesCS1A01G270400 chr6B 79.427 384 66 11 4425 4802 76215377 76215753 4.970000e-65 259
20 TraesCS1A01G270400 chr5B 78.141 398 62 15 3631 4021 492587666 492587287 3.900000e-56 230
21 TraesCS1A01G270400 chr5A 77.778 396 63 15 3631 4019 197431713 197431336 2.350000e-53 220
22 TraesCS1A01G270400 chr2D 77.608 393 63 15 3631 4016 271977392 271977766 1.090000e-51 215
23 TraesCS1A01G270400 chr2A 77.273 396 65 15 3631 4019 735385455 735385078 5.080000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G270400 chr1A 464789745 464794752 5007 False 9249.000000 9249 100.0000 1 5008 1 chr1A.!!$F1 5007
1 TraesCS1A01G270400 chr1D 365526434 365540331 13897 False 1167.833333 5570 87.9510 9 5008 6 chr1D.!!$F1 4999
2 TraesCS1A01G270400 chr1B 489130294 489134608 4314 False 2864.000000 5201 87.1645 1 4306 2 chr1B.!!$F4 4305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
667 7286 0.035439 TGCCGATCCTCCTTTTGTCC 60.035 55.0 0.00 0.0 0.00 4.02 F
670 7289 0.249398 CGATCCTCCTTTTGTCCGGT 59.751 55.0 0.00 0.0 0.00 5.28 F
1067 7728 0.260230 CTACCAGCAGAGGAGAGGGA 59.740 60.0 0.00 0.0 0.00 4.20 F
2029 8702 0.175302 CTCTGTTCTCGCTCCTGCAT 59.825 55.0 0.00 0.0 39.64 3.96 F
3160 9856 0.104671 TTTTTCTGCAGGTGCTTGGC 59.895 50.0 15.13 0.0 42.66 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1932 8605 1.301637 CACAGCCACCATCACGTGA 60.302 57.895 22.48 22.48 35.68 4.35 R
1986 8659 1.494960 ACTTCTGCAGATCCCTCTCC 58.505 55.000 19.04 0.00 0.00 3.71 R
2990 9682 0.179009 GGCTTATGCTCATGGCTGGA 60.179 55.000 7.54 0.00 42.39 3.86 R
3605 10301 0.179097 GCCGATTCCGCTCTTTCTCT 60.179 55.000 0.00 0.00 0.00 3.10 R
4587 13445 0.034756 TGCAGCTTTGCGGACTTCTA 59.965 50.000 0.00 0.00 37.69 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.639601 GATGTGATCATATTGTAATTCGAGGTA 57.360 33.333 6.39 0.00 34.06 3.08
36 37 0.546122 ATTCGAGGTAGCCAATGCCA 59.454 50.000 0.00 0.00 38.69 4.92
44 2080 2.404566 TAGCCAATGCCACGTGGTGT 62.405 55.000 33.92 20.71 38.69 4.16
57 2093 0.465460 GTGGTGTGCTTCCAACCTCA 60.465 55.000 0.00 0.00 36.68 3.86
72 2108 3.423539 ACCTCAATTGCTTGCTACTCA 57.576 42.857 0.00 0.00 32.11 3.41
105 2141 0.254178 AAGATGATGCACGCCTCCTT 59.746 50.000 0.00 0.00 0.00 3.36
106 2142 0.179062 AGATGATGCACGCCTCCTTC 60.179 55.000 0.00 0.00 0.00 3.46
107 2143 0.179062 GATGATGCACGCCTCCTTCT 60.179 55.000 0.00 0.00 0.00 2.85
118 2154 1.279271 GCCTCCTTCTGCTCTTTGGTA 59.721 52.381 0.00 0.00 0.00 3.25
121 2157 1.079503 CCTTCTGCTCTTTGGTACGC 58.920 55.000 0.00 0.00 0.00 4.42
122 2158 1.608025 CCTTCTGCTCTTTGGTACGCA 60.608 52.381 0.00 0.00 0.00 5.24
123 2159 2.350522 CTTCTGCTCTTTGGTACGCAT 58.649 47.619 0.00 0.00 0.00 4.73
125 2161 1.275010 TCTGCTCTTTGGTACGCATCA 59.725 47.619 0.00 0.00 0.00 3.07
131 2168 3.997021 CTCTTTGGTACGCATCAGTTCTT 59.003 43.478 0.00 0.00 0.00 2.52
135 2172 1.654105 GGTACGCATCAGTTCTTGTCG 59.346 52.381 0.00 0.00 0.00 4.35
141 2178 2.754472 CATCAGTTCTTGTCGTGGTGA 58.246 47.619 0.00 0.00 0.00 4.02
154 2191 3.753272 GTCGTGGTGACCTACTTGTACTA 59.247 47.826 2.11 0.00 42.04 1.82
155 2192 4.397417 GTCGTGGTGACCTACTTGTACTAT 59.603 45.833 2.11 0.00 42.04 2.12
202 2239 5.231991 CGACCTCTCTACTAGTCGTTCTAAC 59.768 48.000 0.00 0.00 45.25 2.34
203 2245 6.298441 ACCTCTCTACTAGTCGTTCTAACT 57.702 41.667 0.00 0.00 0.00 2.24
218 2260 3.442076 TCTAACTCCCCTTCAACTCCTC 58.558 50.000 0.00 0.00 0.00 3.71
225 2267 0.252927 CCTTCAACTCCTCCTCCCCT 60.253 60.000 0.00 0.00 0.00 4.79
237 2279 1.333636 CCTCCCCTCTCACGCTTGAT 61.334 60.000 0.00 0.00 0.00 2.57
241 2283 0.807667 CCCTCTCACGCTTGATTCCG 60.808 60.000 0.00 0.00 0.00 4.30
288 2330 0.327924 CTAGCCCCACCACAATGACA 59.672 55.000 0.00 0.00 0.00 3.58
300 2342 5.971202 CACCACAATGACACTTTACACTTTC 59.029 40.000 0.00 0.00 0.00 2.62
308 2350 5.975344 TGACACTTTACACTTTCAGTAGACG 59.025 40.000 0.00 0.00 0.00 4.18
328 2371 0.040204 CAAGGAAGCTCCCCACCAAT 59.960 55.000 7.72 0.00 37.19 3.16
350 4665 3.062466 CCCGTCACGCTCCAGAGA 61.062 66.667 0.00 0.00 0.00 3.10
373 4688 2.011947 CACACTTGATGATGACGCCAT 58.988 47.619 0.00 0.00 35.29 4.40
374 4689 2.011947 ACACTTGATGATGACGCCATG 58.988 47.619 0.00 0.00 32.09 3.66
376 4691 2.287103 CACTTGATGATGACGCCATGAG 59.713 50.000 0.00 0.00 32.09 2.90
398 4715 1.079405 CTGCCCGAAAGACGCCTTA 60.079 57.895 0.00 0.00 41.07 2.69
405 4722 3.370061 CCCGAAAGACGCCTTACTTTAAG 59.630 47.826 0.00 0.00 41.07 1.85
407 4724 4.326548 CCGAAAGACGCCTTACTTTAAGAG 59.673 45.833 0.00 0.00 41.07 2.85
412 4729 3.922910 ACGCCTTACTTTAAGAGTGGAC 58.077 45.455 0.00 0.00 39.48 4.02
439 4756 3.648694 GGATGTGGTCCCTCCTCC 58.351 66.667 0.00 0.00 41.50 4.30
458 7073 0.677731 CCATGTGCCACTCGTCCATT 60.678 55.000 0.00 0.00 0.00 3.16
539 7154 5.336849 CGAGGAGGAAGAACACAAAGAGTAT 60.337 44.000 0.00 0.00 0.00 2.12
553 7169 7.657761 ACACAAAGAGTATGAGAACGAAGAAAT 59.342 33.333 0.00 0.00 0.00 2.17
584 7202 5.819991 TGATTCTAAGGCTTCATTTGAGGT 58.180 37.500 1.30 0.00 0.00 3.85
588 7206 2.957402 AGGCTTCATTTGAGGTGACA 57.043 45.000 0.00 0.00 0.00 3.58
594 7212 6.543831 AGGCTTCATTTGAGGTGACATATAAC 59.456 38.462 0.00 0.00 0.00 1.89
595 7213 6.238759 GGCTTCATTTGAGGTGACATATAACC 60.239 42.308 0.00 0.00 36.66 2.85
598 7216 7.194112 TCATTTGAGGTGACATATAACCAGA 57.806 36.000 4.68 0.00 39.05 3.86
599 7217 7.629157 TCATTTGAGGTGACATATAACCAGAA 58.371 34.615 4.68 0.00 39.05 3.02
600 7218 7.770433 TCATTTGAGGTGACATATAACCAGAAG 59.230 37.037 4.68 0.00 39.05 2.85
601 7219 5.614324 TGAGGTGACATATAACCAGAAGG 57.386 43.478 4.68 0.00 39.05 3.46
641 7260 6.568869 ACAAATCAACCGAATTTGACAGAAA 58.431 32.000 13.76 0.00 38.31 2.52
644 7263 9.190858 CAAATCAACCGAATTTGACAGAAATTA 57.809 29.630 3.12 0.00 38.31 1.40
652 7271 6.237279 CGAATTTGACAGAAATTATGTTGCCG 60.237 38.462 0.00 0.00 30.68 5.69
654 7273 5.895636 TTGACAGAAATTATGTTGCCGAT 57.104 34.783 0.00 0.00 0.00 4.18
657 7276 4.526970 ACAGAAATTATGTTGCCGATCCT 58.473 39.130 0.00 0.00 0.00 3.24
660 7279 3.864789 AATTATGTTGCCGATCCTCCT 57.135 42.857 0.00 0.00 0.00 3.69
661 7280 3.864789 ATTATGTTGCCGATCCTCCTT 57.135 42.857 0.00 0.00 0.00 3.36
663 7282 2.514458 ATGTTGCCGATCCTCCTTTT 57.486 45.000 0.00 0.00 0.00 2.27
664 7283 1.533625 TGTTGCCGATCCTCCTTTTG 58.466 50.000 0.00 0.00 0.00 2.44
665 7284 1.202879 TGTTGCCGATCCTCCTTTTGT 60.203 47.619 0.00 0.00 0.00 2.83
666 7285 1.468914 GTTGCCGATCCTCCTTTTGTC 59.531 52.381 0.00 0.00 0.00 3.18
667 7286 0.035439 TGCCGATCCTCCTTTTGTCC 60.035 55.000 0.00 0.00 0.00 4.02
668 7287 1.090052 GCCGATCCTCCTTTTGTCCG 61.090 60.000 0.00 0.00 0.00 4.79
669 7288 0.462047 CCGATCCTCCTTTTGTCCGG 60.462 60.000 0.00 0.00 0.00 5.14
670 7289 0.249398 CGATCCTCCTTTTGTCCGGT 59.751 55.000 0.00 0.00 0.00 5.28
671 7290 1.739067 GATCCTCCTTTTGTCCGGTG 58.261 55.000 0.00 0.00 0.00 4.94
672 7291 1.003233 GATCCTCCTTTTGTCCGGTGT 59.997 52.381 0.00 0.00 0.00 4.16
673 7292 0.395312 TCCTCCTTTTGTCCGGTGTC 59.605 55.000 0.00 0.00 0.00 3.67
674 7293 0.949105 CCTCCTTTTGTCCGGTGTCG 60.949 60.000 0.00 0.00 0.00 4.35
675 7294 1.566018 CTCCTTTTGTCCGGTGTCGC 61.566 60.000 0.00 0.00 34.56 5.19
676 7295 2.613506 CCTTTTGTCCGGTGTCGCC 61.614 63.158 0.00 0.00 34.56 5.54
701 7343 0.671781 ACACGCCAGCTGAGACATTC 60.672 55.000 17.39 0.00 0.00 2.67
717 7359 1.240641 ATTCAAATGGCACCGCGACA 61.241 50.000 8.23 0.67 0.00 4.35
719 7361 1.729131 CAAATGGCACCGCGACAAC 60.729 57.895 8.23 0.00 0.00 3.32
724 7366 1.657181 GGCACCGCGACAACTTTTG 60.657 57.895 8.23 0.00 0.00 2.44
728 7370 0.379316 ACCGCGACAACTTTTGAACC 59.621 50.000 8.23 0.00 0.00 3.62
734 7376 3.730715 GCGACAACTTTTGAACCTGAATG 59.269 43.478 0.00 0.00 0.00 2.67
739 7381 5.652014 ACAACTTTTGAACCTGAATGACTCA 59.348 36.000 0.00 0.00 0.00 3.41
754 7398 7.436933 TGAATGACTCAGATTACGCTATCAAT 58.563 34.615 0.88 0.00 0.00 2.57
760 7404 5.714047 TCAGATTACGCTATCAATGCCTAG 58.286 41.667 0.88 0.00 0.00 3.02
762 7406 6.153510 TCAGATTACGCTATCAATGCCTAGAT 59.846 38.462 0.00 0.00 0.00 1.98
765 7409 4.815533 ACGCTATCAATGCCTAGATGAT 57.184 40.909 0.00 0.00 37.54 2.45
766 7410 4.502016 ACGCTATCAATGCCTAGATGATG 58.498 43.478 0.00 0.00 35.53 3.07
776 7421 6.896021 ATGCCTAGATGATGATTTTCAAGG 57.104 37.500 0.00 0.00 0.00 3.61
794 7439 8.868522 TTTCAAGGTTTCAAGATCTATGTGAT 57.131 30.769 0.00 0.00 38.27 3.06
798 7443 9.605275 CAAGGTTTCAAGATCTATGTGATAGAA 57.395 33.333 0.00 0.00 44.41 2.10
841 7489 7.122799 AGACATAGTACAATGCACTTCACTCTA 59.877 37.037 0.00 0.00 0.00 2.43
842 7490 7.611770 ACATAGTACAATGCACTTCACTCTAA 58.388 34.615 0.00 0.00 0.00 2.10
843 7491 8.094548 ACATAGTACAATGCACTTCACTCTAAA 58.905 33.333 0.00 0.00 0.00 1.85
844 7492 8.598924 CATAGTACAATGCACTTCACTCTAAAG 58.401 37.037 0.00 0.00 0.00 1.85
845 7493 6.759272 AGTACAATGCACTTCACTCTAAAGA 58.241 36.000 0.00 0.00 0.00 2.52
850 7498 7.864379 ACAATGCACTTCACTCTAAAGATTTTG 59.136 33.333 0.00 0.00 0.00 2.44
852 7500 6.959361 TGCACTTCACTCTAAAGATTTTGAC 58.041 36.000 0.00 0.00 0.00 3.18
854 7502 7.229306 TGCACTTCACTCTAAAGATTTTGACAT 59.771 33.333 0.00 0.00 0.00 3.06
901 7562 4.856664 TGTCTAGTCGAGTTCACAGTTTC 58.143 43.478 0.00 0.00 0.00 2.78
938 7599 2.547211 GCATCCAAGATCCAACGATCAG 59.453 50.000 3.15 0.00 46.42 2.90
964 7625 3.148279 ACGGCTCCACGGATCTCC 61.148 66.667 0.00 0.00 38.39 3.71
1066 7727 0.758685 CCTACCAGCAGAGGAGAGGG 60.759 65.000 0.00 0.00 34.46 4.30
1067 7728 0.260230 CTACCAGCAGAGGAGAGGGA 59.740 60.000 0.00 0.00 0.00 4.20
1068 7729 0.937441 TACCAGCAGAGGAGAGGGAT 59.063 55.000 0.00 0.00 0.00 3.85
1069 7730 0.398381 ACCAGCAGAGGAGAGGGATC 60.398 60.000 0.00 0.00 0.00 3.36
1329 7999 3.400054 CCTTCCCCTCCCGTGACC 61.400 72.222 0.00 0.00 0.00 4.02
1330 8000 2.606519 CTTCCCCTCCCGTGACCA 60.607 66.667 0.00 0.00 0.00 4.02
1331 8001 2.926242 TTCCCCTCCCGTGACCAC 60.926 66.667 0.00 0.00 0.00 4.16
1686 8359 2.113139 ACCAAGTTCGCCACCAGG 59.887 61.111 0.00 0.00 38.23 4.45
1719 8392 2.694213 GACAAGAACTTCAGCCTCCTC 58.306 52.381 0.00 0.00 0.00 3.71
1899 8572 0.987294 CCAGGAAGGACACCATCACT 59.013 55.000 0.00 0.00 41.22 3.41
1932 8605 0.839277 TGAACGAGGATGCCATGGAT 59.161 50.000 18.40 6.13 0.00 3.41
1986 8659 1.094073 CCAAGGCGATGCAGAAGGAG 61.094 60.000 0.00 0.00 0.00 3.69
2029 8702 0.175302 CTCTGTTCTCGCTCCTGCAT 59.825 55.000 0.00 0.00 39.64 3.96
2144 8817 7.011857 GGATCAGGTGAGAGTTTAATTGCTTAG 59.988 40.741 0.00 0.00 0.00 2.18
2152 8825 7.093322 AGAGTTTAATTGCTTAGCTCCATTG 57.907 36.000 5.60 0.00 0.00 2.82
2204 8887 7.446013 TGAACTGGGTAACATAGTTTAAACAGG 59.554 37.037 20.06 10.94 43.04 4.00
2443 9128 6.237969 GCTTTAACTTCCAGAGAGAATTAGCG 60.238 42.308 0.00 0.00 0.00 4.26
2480 9165 7.340743 CCCCATGTTTACAACTAATATTCCACA 59.659 37.037 0.00 0.00 0.00 4.17
2505 9190 9.896645 CATGGGTAGCATCTTGTAAGATATTAT 57.103 33.333 6.79 0.00 43.65 1.28
2533 9221 5.303259 TGGTGCTATATTATCAAGTGGCA 57.697 39.130 0.00 0.00 0.00 4.92
2598 9286 5.935206 TCATGGCAATGTCTTTTACGTAAGA 59.065 36.000 8.23 3.05 36.67 2.10
2685 9375 3.066369 CAGATGTTGTGCTGCATGATC 57.934 47.619 5.27 5.43 0.00 2.92
2688 9378 3.508402 AGATGTTGTGCTGCATGATCAAA 59.492 39.130 5.27 0.00 0.00 2.69
2745 9436 3.887916 AAGCCTAAAACTGTACCCCAA 57.112 42.857 0.00 0.00 0.00 4.12
2746 9437 3.150458 AGCCTAAAACTGTACCCCAAC 57.850 47.619 0.00 0.00 0.00 3.77
2758 9449 2.597578 ACCCCAACCACCATAACTTC 57.402 50.000 0.00 0.00 0.00 3.01
2883 9575 6.817765 AGTGTGGGATTTTTGTGTGTATAG 57.182 37.500 0.00 0.00 0.00 1.31
2904 9596 3.096852 TGGCCTTGGTATGGTCAGA 57.903 52.632 3.32 0.00 33.83 3.27
2990 9682 3.624777 CCCTGATCTTGGTTGTAAGCAT 58.375 45.455 0.00 0.00 36.16 3.79
3072 9764 4.037327 GGACCCTACTACGAGGTTATTGAC 59.963 50.000 0.00 0.00 34.45 3.18
3101 9793 4.627035 TGTGACTTTACGATGATTGAGCAG 59.373 41.667 0.00 0.00 0.00 4.24
3160 9856 0.104671 TTTTTCTGCAGGTGCTTGGC 59.895 50.000 15.13 0.00 42.66 4.52
3286 9982 2.029649 AGATGCAAACAACATGGCTGAC 60.030 45.455 0.00 0.00 0.00 3.51
3337 10033 4.900684 TCTACATTGATTTGGTTGGACGA 58.099 39.130 0.00 0.00 0.00 4.20
3365 10061 1.002366 GAGCTCACATGTAAGCACCG 58.998 55.000 22.99 0.00 41.06 4.94
3368 10064 1.359848 CTCACATGTAAGCACCGACC 58.640 55.000 0.00 0.00 0.00 4.79
3398 10094 4.453480 TCCTCTTGGTTCACAGGATTTT 57.547 40.909 0.00 0.00 34.39 1.82
3438 10134 3.264193 TCCTGCTATCCATGTTGAACTGT 59.736 43.478 0.00 0.00 0.00 3.55
3443 10139 3.719268 ATCCATGTTGAACTGTAGGCA 57.281 42.857 0.00 0.00 0.00 4.75
3449 10145 0.391228 TTGAACTGTAGGCACGCTCA 59.609 50.000 0.00 0.00 0.00 4.26
3470 10166 2.015736 AAACTGATGCTGCTAGGACG 57.984 50.000 0.00 0.00 0.00 4.79
3497 10193 1.500783 CCCAGGAGGCTTTCAGGGAA 61.501 60.000 0.00 0.00 42.38 3.97
3665 10361 2.247311 AAGTTAAAATGCTGCGCTCG 57.753 45.000 9.73 0.00 0.00 5.03
3712 10413 4.022849 AGTTATTGGCTTTGCTGTTCACTC 60.023 41.667 0.00 0.00 0.00 3.51
3782 10483 4.224991 CCAATTTTGGGCCATCAGATTT 57.775 40.909 7.26 0.00 44.70 2.17
3841 10542 2.109126 GCTGACAAGATGCCCGGTC 61.109 63.158 0.00 0.00 0.00 4.79
3871 10572 1.579429 GTCGCATGTTGGTGGTTCC 59.421 57.895 0.00 0.00 0.00 3.62
3948 10654 5.882557 ACTTCCCTGATTTGCTGTGTAATAG 59.117 40.000 0.00 0.00 0.00 1.73
3985 10691 2.548480 GTGGTCAGAAACTACACTTGGC 59.452 50.000 0.00 0.00 39.08 4.52
4010 10716 3.510719 CATGGTTTCATGTTTAAGCCGG 58.489 45.455 0.00 0.00 44.22 6.13
4031 10741 0.957395 TTGCTTGCTGCTAGCCTGTC 60.957 55.000 28.15 6.23 41.51 3.51
4046 10756 3.077359 GCCTGTCAATGCTCACTTTACT 58.923 45.455 0.00 0.00 0.00 2.24
4048 10758 3.369147 CCTGTCAATGCTCACTTTACTCG 59.631 47.826 0.00 0.00 0.00 4.18
4052 10762 5.805486 TGTCAATGCTCACTTTACTCGTATC 59.195 40.000 0.00 0.00 0.00 2.24
4057 10767 6.519679 TGCTCACTTTACTCGTATCCTTTA 57.480 37.500 0.00 0.00 0.00 1.85
4058 10773 6.327934 TGCTCACTTTACTCGTATCCTTTAC 58.672 40.000 0.00 0.00 0.00 2.01
4076 10791 1.308877 ACCCCCACTGGCTGAATAAT 58.691 50.000 0.00 0.00 0.00 1.28
4082 10797 1.331756 CACTGGCTGAATAATCGTGGC 59.668 52.381 0.00 0.00 0.00 5.01
4083 10798 0.583438 CTGGCTGAATAATCGTGGCG 59.417 55.000 0.00 0.00 32.50 5.69
4134 10851 7.735917 TGTGCTATGCCTAGAAATAATACAGT 58.264 34.615 0.00 0.00 0.00 3.55
4137 10854 8.531982 TGCTATGCCTAGAAATAATACAGTAGG 58.468 37.037 0.00 0.00 0.00 3.18
4198 11079 5.432157 CGTAAATAAGATCGTGGTTGATGC 58.568 41.667 0.00 0.00 0.00 3.91
4280 11170 2.939022 GTGCACTCTGTTCGCCAC 59.061 61.111 10.32 0.00 0.00 5.01
4306 11196 2.484594 GGAGCATTCTAGGTCTGCTTCC 60.485 54.545 13.44 12.10 45.79 3.46
4307 11197 1.488393 AGCATTCTAGGTCTGCTTCCC 59.512 52.381 8.28 0.00 43.44 3.97
4308 11198 1.488393 GCATTCTAGGTCTGCTTCCCT 59.512 52.381 5.25 0.00 33.15 4.20
4309 11199 2.484594 GCATTCTAGGTCTGCTTCCCTC 60.485 54.545 5.25 0.00 33.15 4.30
4311 11201 2.445682 TCTAGGTCTGCTTCCCTCTC 57.554 55.000 0.00 0.00 32.08 3.20
4312 11202 1.926665 TCTAGGTCTGCTTCCCTCTCT 59.073 52.381 0.00 0.00 32.08 3.10
4313 11203 2.031120 CTAGGTCTGCTTCCCTCTCTG 58.969 57.143 0.00 0.00 32.08 3.35
4315 11205 1.008206 AGGTCTGCTTCCCTCTCTGAT 59.992 52.381 0.00 0.00 0.00 2.90
4349 11420 2.227388 CTCTTCGGCAGTTTCTTTGCAT 59.773 45.455 0.00 0.00 43.28 3.96
4355 11426 1.973138 CAGTTTCTTTGCATCAGCGG 58.027 50.000 0.00 0.00 46.23 5.52
4356 11427 0.883833 AGTTTCTTTGCATCAGCGGG 59.116 50.000 0.00 0.00 46.23 6.13
4357 11428 0.733909 GTTTCTTTGCATCAGCGGGC 60.734 55.000 0.00 0.00 46.23 6.13
4359 11430 0.895100 TTCTTTGCATCAGCGGGCTT 60.895 50.000 0.00 0.00 46.23 4.35
4360 11431 0.035534 TCTTTGCATCAGCGGGCTTA 60.036 50.000 0.00 0.00 46.23 3.09
4361 11432 0.099436 CTTTGCATCAGCGGGCTTAC 59.901 55.000 0.00 0.00 46.23 2.34
4362 11433 0.607762 TTTGCATCAGCGGGCTTACA 60.608 50.000 0.00 0.00 46.23 2.41
4363 11434 0.607762 TTGCATCAGCGGGCTTACAA 60.608 50.000 0.00 0.00 46.23 2.41
4364 11435 0.607762 TGCATCAGCGGGCTTACAAA 60.608 50.000 0.00 0.00 46.23 2.83
4365 11436 0.525761 GCATCAGCGGGCTTACAAAA 59.474 50.000 0.00 0.00 0.00 2.44
4367 11438 2.801063 CATCAGCGGGCTTACAAAATG 58.199 47.619 0.00 0.00 0.00 2.32
4369 11440 0.798009 CAGCGGGCTTACAAAATGCG 60.798 55.000 0.00 0.00 0.00 4.73
4374 13232 0.525761 GGCTTACAAAATGCGCAGGA 59.474 50.000 18.32 0.00 0.00 3.86
4381 13239 1.402968 CAAAATGCGCAGGAGCTATGT 59.597 47.619 18.32 0.00 39.10 2.29
4386 13244 0.524180 GCGCAGGAGCTATGTTTTGC 60.524 55.000 0.30 0.00 39.10 3.68
4387 13245 0.804364 CGCAGGAGCTATGTTTTGCA 59.196 50.000 0.00 0.00 39.10 4.08
4388 13246 1.202110 CGCAGGAGCTATGTTTTGCAG 60.202 52.381 0.00 0.00 39.10 4.41
4389 13247 1.133790 GCAGGAGCTATGTTTTGCAGG 59.866 52.381 0.00 0.00 37.91 4.85
4390 13248 2.715046 CAGGAGCTATGTTTTGCAGGA 58.285 47.619 0.00 0.00 0.00 3.86
4391 13249 2.681848 CAGGAGCTATGTTTTGCAGGAG 59.318 50.000 0.00 0.00 0.00 3.69
4393 13251 1.403323 GAGCTATGTTTTGCAGGAGCC 59.597 52.381 0.00 0.00 39.50 4.70
4394 13252 1.176527 GCTATGTTTTGCAGGAGCCA 58.823 50.000 0.00 0.00 41.13 4.75
4395 13253 1.753073 GCTATGTTTTGCAGGAGCCAT 59.247 47.619 0.00 0.00 41.13 4.40
4396 13254 2.480759 GCTATGTTTTGCAGGAGCCATG 60.481 50.000 0.00 0.00 41.13 3.66
4397 13255 1.636148 ATGTTTTGCAGGAGCCATGT 58.364 45.000 0.00 0.00 41.13 3.21
4398 13256 1.412079 TGTTTTGCAGGAGCCATGTT 58.588 45.000 0.00 0.00 41.13 2.71
4399 13257 1.761784 TGTTTTGCAGGAGCCATGTTT 59.238 42.857 0.00 0.00 41.13 2.83
4400 13258 2.170187 TGTTTTGCAGGAGCCATGTTTT 59.830 40.909 0.00 0.00 41.13 2.43
4401 13259 3.205338 GTTTTGCAGGAGCCATGTTTTT 58.795 40.909 0.00 0.00 41.13 1.94
4423 13281 6.952773 TTTGACCAAACTTAGCATTACAGT 57.047 33.333 0.00 0.00 0.00 3.55
4424 13282 8.453238 TTTTGACCAAACTTAGCATTACAGTA 57.547 30.769 0.00 0.00 0.00 2.74
4425 13283 7.429636 TTGACCAAACTTAGCATTACAGTAC 57.570 36.000 0.00 0.00 0.00 2.73
4426 13284 5.636121 TGACCAAACTTAGCATTACAGTACG 59.364 40.000 0.00 0.00 0.00 3.67
4428 13286 5.172934 CCAAACTTAGCATTACAGTACGGA 58.827 41.667 0.00 0.00 0.00 4.69
4429 13287 5.640357 CCAAACTTAGCATTACAGTACGGAA 59.360 40.000 0.00 0.00 0.00 4.30
4430 13288 6.401796 CCAAACTTAGCATTACAGTACGGAAC 60.402 42.308 0.00 0.00 0.00 3.62
4446 13304 3.455619 GGAACGTGTGCTAGATTTGTG 57.544 47.619 0.00 0.00 0.00 3.33
4448 13306 2.543777 ACGTGTGCTAGATTTGTGGT 57.456 45.000 0.00 0.00 0.00 4.16
4449 13307 2.846193 ACGTGTGCTAGATTTGTGGTT 58.154 42.857 0.00 0.00 0.00 3.67
4450 13308 2.548057 ACGTGTGCTAGATTTGTGGTTG 59.452 45.455 0.00 0.00 0.00 3.77
4451 13309 2.805671 CGTGTGCTAGATTTGTGGTTGA 59.194 45.455 0.00 0.00 0.00 3.18
4452 13310 3.436704 CGTGTGCTAGATTTGTGGTTGAT 59.563 43.478 0.00 0.00 0.00 2.57
4454 13312 3.758023 TGTGCTAGATTTGTGGTTGATGG 59.242 43.478 0.00 0.00 0.00 3.51
4455 13313 4.009675 GTGCTAGATTTGTGGTTGATGGA 58.990 43.478 0.00 0.00 0.00 3.41
4456 13314 4.641989 GTGCTAGATTTGTGGTTGATGGAT 59.358 41.667 0.00 0.00 0.00 3.41
4457 13315 4.641541 TGCTAGATTTGTGGTTGATGGATG 59.358 41.667 0.00 0.00 0.00 3.51
4459 13317 2.762327 AGATTTGTGGTTGATGGATGGC 59.238 45.455 0.00 0.00 0.00 4.40
4462 13320 2.120909 GTGGTTGATGGATGGCGGG 61.121 63.158 0.00 0.00 0.00 6.13
4463 13321 2.275418 GGTTGATGGATGGCGGGT 59.725 61.111 0.00 0.00 0.00 5.28
4464 13322 2.120909 GGTTGATGGATGGCGGGTG 61.121 63.158 0.00 0.00 0.00 4.61
4465 13323 2.120909 GTTGATGGATGGCGGGTGG 61.121 63.158 0.00 0.00 0.00 4.61
4466 13324 2.611505 TTGATGGATGGCGGGTGGT 61.612 57.895 0.00 0.00 0.00 4.16
4467 13325 2.148723 TTGATGGATGGCGGGTGGTT 62.149 55.000 0.00 0.00 0.00 3.67
4468 13326 1.379843 GATGGATGGCGGGTGGTTT 60.380 57.895 0.00 0.00 0.00 3.27
4469 13327 1.379843 ATGGATGGCGGGTGGTTTC 60.380 57.895 0.00 0.00 0.00 2.78
4470 13328 2.034999 GGATGGCGGGTGGTTTCA 59.965 61.111 0.00 0.00 0.00 2.69
4471 13329 1.379843 GGATGGCGGGTGGTTTCAT 60.380 57.895 0.00 0.00 0.00 2.57
4472 13330 0.970427 GGATGGCGGGTGGTTTCATT 60.970 55.000 0.00 0.00 0.00 2.57
4474 13332 0.039618 ATGGCGGGTGGTTTCATTCT 59.960 50.000 0.00 0.00 0.00 2.40
4475 13333 0.178975 TGGCGGGTGGTTTCATTCTT 60.179 50.000 0.00 0.00 0.00 2.52
4477 13335 0.168128 GCGGGTGGTTTCATTCTTCG 59.832 55.000 0.00 0.00 0.00 3.79
4481 13339 2.227194 GGTGGTTTCATTCTTCGGTGT 58.773 47.619 0.00 0.00 0.00 4.16
4483 13341 3.139077 GTGGTTTCATTCTTCGGTGTCT 58.861 45.455 0.00 0.00 0.00 3.41
4485 13343 4.753107 GTGGTTTCATTCTTCGGTGTCTTA 59.247 41.667 0.00 0.00 0.00 2.10
4486 13344 4.994852 TGGTTTCATTCTTCGGTGTCTTAG 59.005 41.667 0.00 0.00 0.00 2.18
4489 13347 4.092771 TCATTCTTCGGTGTCTTAGTCG 57.907 45.455 0.00 0.00 0.00 4.18
4490 13348 3.504906 TCATTCTTCGGTGTCTTAGTCGT 59.495 43.478 0.00 0.00 0.00 4.34
4491 13349 2.983402 TCTTCGGTGTCTTAGTCGTG 57.017 50.000 0.00 0.00 0.00 4.35
4493 13351 3.079578 TCTTCGGTGTCTTAGTCGTGAT 58.920 45.455 0.00 0.00 0.00 3.06
4494 13352 2.913777 TCGGTGTCTTAGTCGTGATG 57.086 50.000 0.00 0.00 0.00 3.07
4495 13353 1.471287 TCGGTGTCTTAGTCGTGATGG 59.529 52.381 0.00 0.00 0.00 3.51
4496 13354 1.469251 CGGTGTCTTAGTCGTGATGGG 60.469 57.143 0.00 0.00 0.00 4.00
4498 13356 1.549170 GTGTCTTAGTCGTGATGGGGT 59.451 52.381 0.00 0.00 0.00 4.95
4501 13359 0.537188 CTTAGTCGTGATGGGGTGCT 59.463 55.000 0.00 0.00 0.00 4.40
4502 13360 1.754803 CTTAGTCGTGATGGGGTGCTA 59.245 52.381 0.00 0.00 0.00 3.49
4504 13362 0.981183 AGTCGTGATGGGGTGCTAAA 59.019 50.000 0.00 0.00 0.00 1.85
4505 13363 1.559682 AGTCGTGATGGGGTGCTAAAT 59.440 47.619 0.00 0.00 0.00 1.40
4506 13364 1.940613 GTCGTGATGGGGTGCTAAATC 59.059 52.381 0.00 0.00 0.00 2.17
4507 13365 1.837439 TCGTGATGGGGTGCTAAATCT 59.163 47.619 0.00 0.00 0.00 2.40
4508 13366 3.035363 TCGTGATGGGGTGCTAAATCTA 58.965 45.455 0.00 0.00 0.00 1.98
4509 13367 3.452990 TCGTGATGGGGTGCTAAATCTAA 59.547 43.478 0.00 0.00 0.00 2.10
4510 13368 4.080807 TCGTGATGGGGTGCTAAATCTAAA 60.081 41.667 0.00 0.00 0.00 1.85
4512 13370 5.193679 GTGATGGGGTGCTAAATCTAAAGT 58.806 41.667 0.00 0.00 0.00 2.66
4514 13372 5.885912 TGATGGGGTGCTAAATCTAAAGTTC 59.114 40.000 0.00 0.00 0.00 3.01
4515 13373 5.249780 TGGGGTGCTAAATCTAAAGTTCA 57.750 39.130 0.00 0.00 0.00 3.18
4516 13374 5.636123 TGGGGTGCTAAATCTAAAGTTCAA 58.364 37.500 0.00 0.00 0.00 2.69
4517 13375 6.252995 TGGGGTGCTAAATCTAAAGTTCAAT 58.747 36.000 0.00 0.00 0.00 2.57
4518 13376 6.152661 TGGGGTGCTAAATCTAAAGTTCAATG 59.847 38.462 0.00 0.00 0.00 2.82
4519 13377 6.405842 GGGGTGCTAAATCTAAAGTTCAATGG 60.406 42.308 0.00 0.00 0.00 3.16
4520 13378 6.036470 GGTGCTAAATCTAAAGTTCAATGGC 58.964 40.000 0.00 0.00 0.00 4.40
4521 13379 5.739161 GTGCTAAATCTAAAGTTCAATGGCG 59.261 40.000 0.00 0.00 0.00 5.69
4522 13380 5.414454 TGCTAAATCTAAAGTTCAATGGCGT 59.586 36.000 0.00 0.00 0.00 5.68
4523 13381 5.739161 GCTAAATCTAAAGTTCAATGGCGTG 59.261 40.000 0.00 0.00 0.00 5.34
4524 13382 5.705609 AAATCTAAAGTTCAATGGCGTGT 57.294 34.783 0.00 0.00 0.00 4.49
4525 13383 5.705609 AATCTAAAGTTCAATGGCGTGTT 57.294 34.783 0.00 0.00 0.00 3.32
4526 13384 5.705609 ATCTAAAGTTCAATGGCGTGTTT 57.294 34.783 0.00 0.00 0.00 2.83
4527 13385 6.811253 ATCTAAAGTTCAATGGCGTGTTTA 57.189 33.333 0.00 0.00 0.00 2.01
4528 13386 6.236017 TCTAAAGTTCAATGGCGTGTTTAG 57.764 37.500 0.00 0.00 0.00 1.85
4529 13387 3.915437 AAGTTCAATGGCGTGTTTAGG 57.085 42.857 0.00 0.00 0.00 2.69
4530 13388 2.159382 AGTTCAATGGCGTGTTTAGGG 58.841 47.619 0.00 0.00 0.00 3.53
4531 13389 1.883926 GTTCAATGGCGTGTTTAGGGT 59.116 47.619 0.00 0.00 0.00 4.34
4532 13390 1.529226 TCAATGGCGTGTTTAGGGTG 58.471 50.000 0.00 0.00 0.00 4.61
4533 13391 1.202830 TCAATGGCGTGTTTAGGGTGT 60.203 47.619 0.00 0.00 0.00 4.16
4534 13392 1.611491 CAATGGCGTGTTTAGGGTGTT 59.389 47.619 0.00 0.00 0.00 3.32
4535 13393 1.243902 ATGGCGTGTTTAGGGTGTTG 58.756 50.000 0.00 0.00 0.00 3.33
4536 13394 1.284715 GGCGTGTTTAGGGTGTTGC 59.715 57.895 0.00 0.00 0.00 4.17
4537 13395 1.284715 GCGTGTTTAGGGTGTTGCC 59.715 57.895 0.00 0.00 0.00 4.52
4546 13404 2.836154 GGTGTTGCCCTGGTCTGA 59.164 61.111 0.00 0.00 0.00 3.27
4547 13405 1.380302 GGTGTTGCCCTGGTCTGAT 59.620 57.895 0.00 0.00 0.00 2.90
4548 13406 0.251341 GGTGTTGCCCTGGTCTGATT 60.251 55.000 0.00 0.00 0.00 2.57
4549 13407 1.620822 GTGTTGCCCTGGTCTGATTT 58.379 50.000 0.00 0.00 0.00 2.17
4550 13408 1.270550 GTGTTGCCCTGGTCTGATTTG 59.729 52.381 0.00 0.00 0.00 2.32
4551 13409 1.133513 TGTTGCCCTGGTCTGATTTGT 60.134 47.619 0.00 0.00 0.00 2.83
4552 13410 1.963515 GTTGCCCTGGTCTGATTTGTT 59.036 47.619 0.00 0.00 0.00 2.83
4553 13411 1.909700 TGCCCTGGTCTGATTTGTTC 58.090 50.000 0.00 0.00 0.00 3.18
4554 13412 1.144708 TGCCCTGGTCTGATTTGTTCA 59.855 47.619 0.00 0.00 0.00 3.18
4555 13413 2.238521 GCCCTGGTCTGATTTGTTCAA 58.761 47.619 0.00 0.00 32.78 2.69
4556 13414 2.827921 GCCCTGGTCTGATTTGTTCAAT 59.172 45.455 0.00 0.00 32.78 2.57
4557 13415 4.016444 GCCCTGGTCTGATTTGTTCAATA 58.984 43.478 0.00 0.00 32.78 1.90
4558 13416 4.462483 GCCCTGGTCTGATTTGTTCAATAA 59.538 41.667 0.00 0.00 32.78 1.40
4559 13417 5.622233 GCCCTGGTCTGATTTGTTCAATAAC 60.622 44.000 0.00 0.00 32.78 1.89
4560 13418 5.476599 CCCTGGTCTGATTTGTTCAATAACA 59.523 40.000 0.00 0.00 43.85 2.41
4573 13431 7.759489 TGTTCAATAACAATGGCTTTACTCT 57.241 32.000 0.00 0.00 42.60 3.24
4574 13432 8.177119 TGTTCAATAACAATGGCTTTACTCTT 57.823 30.769 0.00 0.00 42.60 2.85
4575 13433 8.081633 TGTTCAATAACAATGGCTTTACTCTTG 58.918 33.333 0.00 0.00 42.60 3.02
4576 13434 7.156876 TCAATAACAATGGCTTTACTCTTGG 57.843 36.000 0.00 0.00 0.00 3.61
4577 13435 6.719370 TCAATAACAATGGCTTTACTCTTGGT 59.281 34.615 0.00 0.00 0.00 3.67
4578 13436 4.853924 AACAATGGCTTTACTCTTGGTG 57.146 40.909 0.00 0.00 0.00 4.17
4579 13437 4.098914 ACAATGGCTTTACTCTTGGTGA 57.901 40.909 0.00 0.00 0.00 4.02
4593 13451 5.848406 CTCTTGGTGAGTCACTTTAGAAGT 58.152 41.667 22.18 0.00 39.00 3.01
4594 13452 5.844004 TCTTGGTGAGTCACTTTAGAAGTC 58.156 41.667 22.18 3.56 40.46 3.01
4595 13453 4.602340 TGGTGAGTCACTTTAGAAGTCC 57.398 45.455 22.18 2.83 40.46 3.85
4596 13454 3.005472 TGGTGAGTCACTTTAGAAGTCCG 59.995 47.826 22.18 0.00 40.46 4.79
4597 13455 2.987821 GTGAGTCACTTTAGAAGTCCGC 59.012 50.000 16.26 0.00 40.46 5.54
4598 13456 2.626266 TGAGTCACTTTAGAAGTCCGCA 59.374 45.455 0.00 0.00 40.46 5.69
4599 13457 3.069016 TGAGTCACTTTAGAAGTCCGCAA 59.931 43.478 0.00 0.00 40.46 4.85
4600 13458 4.056050 GAGTCACTTTAGAAGTCCGCAAA 58.944 43.478 0.00 0.00 40.46 3.68
4601 13459 4.058817 AGTCACTTTAGAAGTCCGCAAAG 58.941 43.478 0.00 0.00 40.46 2.77
4602 13460 2.806244 TCACTTTAGAAGTCCGCAAAGC 59.194 45.455 0.00 0.00 40.46 3.51
4603 13461 2.808543 CACTTTAGAAGTCCGCAAAGCT 59.191 45.455 0.00 0.00 40.46 3.74
4604 13462 2.808543 ACTTTAGAAGTCCGCAAAGCTG 59.191 45.455 0.00 0.00 37.02 4.24
4605 13463 1.156736 TTAGAAGTCCGCAAAGCTGC 58.843 50.000 0.00 0.00 45.75 5.25
4618 13476 3.818387 CAAAGCTGCATATTAGCGATGG 58.182 45.455 1.02 0.00 45.61 3.51
4619 13477 3.407424 AAGCTGCATATTAGCGATGGA 57.593 42.857 1.02 0.00 45.61 3.41
4620 13478 3.407424 AGCTGCATATTAGCGATGGAA 57.593 42.857 1.02 0.00 45.61 3.53
4621 13479 3.947868 AGCTGCATATTAGCGATGGAAT 58.052 40.909 1.02 0.00 45.61 3.01
4622 13480 3.688185 AGCTGCATATTAGCGATGGAATG 59.312 43.478 1.02 0.00 45.61 2.67
4623 13481 3.181503 GCTGCATATTAGCGATGGAATGG 60.182 47.826 0.00 0.00 37.31 3.16
4624 13482 4.256110 CTGCATATTAGCGATGGAATGGA 58.744 43.478 0.00 0.00 37.31 3.41
4625 13483 4.256110 TGCATATTAGCGATGGAATGGAG 58.744 43.478 0.00 0.00 37.31 3.86
4626 13484 3.064545 GCATATTAGCGATGGAATGGAGC 59.935 47.826 0.00 0.00 0.00 4.70
4627 13485 4.511527 CATATTAGCGATGGAATGGAGCT 58.488 43.478 0.00 0.00 41.45 4.09
4628 13486 2.245159 TTAGCGATGGAATGGAGCTG 57.755 50.000 0.00 0.00 38.73 4.24
4629 13487 0.250038 TAGCGATGGAATGGAGCTGC 60.250 55.000 0.00 0.00 38.73 5.25
4630 13488 1.525535 GCGATGGAATGGAGCTGCT 60.526 57.895 6.82 0.00 0.00 4.24
4631 13489 1.099879 GCGATGGAATGGAGCTGCTT 61.100 55.000 6.82 0.00 0.00 3.91
4632 13490 0.942962 CGATGGAATGGAGCTGCTTC 59.057 55.000 6.82 0.96 0.00 3.86
4633 13491 0.942962 GATGGAATGGAGCTGCTTCG 59.057 55.000 6.82 0.00 0.00 3.79
4634 13492 0.543277 ATGGAATGGAGCTGCTTCGA 59.457 50.000 6.82 5.77 0.00 3.71
4635 13493 0.324614 TGGAATGGAGCTGCTTCGAA 59.675 50.000 6.82 0.00 0.00 3.71
4636 13494 0.729690 GGAATGGAGCTGCTTCGAAC 59.270 55.000 6.82 0.00 0.00 3.95
4637 13495 1.677217 GGAATGGAGCTGCTTCGAACT 60.677 52.381 6.82 0.00 0.00 3.01
4638 13496 1.663135 GAATGGAGCTGCTTCGAACTC 59.337 52.381 6.82 0.00 0.00 3.01
4639 13497 0.459237 ATGGAGCTGCTTCGAACTCG 60.459 55.000 6.82 0.00 41.45 4.18
4653 13511 2.752238 CTCGAGTGAGGAGGCGGT 60.752 66.667 3.62 0.00 38.65 5.68
4654 13512 2.750637 TCGAGTGAGGAGGCGGTC 60.751 66.667 0.00 0.00 0.00 4.79
4662 13520 3.635510 GGAGGCGGTCCATCTTCT 58.364 61.111 0.00 0.00 46.10 2.85
4663 13521 1.908483 GGAGGCGGTCCATCTTCTT 59.092 57.895 0.00 0.00 46.10 2.52
4664 13522 0.253327 GGAGGCGGTCCATCTTCTTT 59.747 55.000 0.00 0.00 46.10 2.52
4665 13523 1.340114 GGAGGCGGTCCATCTTCTTTT 60.340 52.381 0.00 0.00 46.10 2.27
4666 13524 2.437413 GAGGCGGTCCATCTTCTTTTT 58.563 47.619 0.00 0.00 33.74 1.94
4667 13525 2.420372 GAGGCGGTCCATCTTCTTTTTC 59.580 50.000 0.00 0.00 33.74 2.29
4668 13526 2.040412 AGGCGGTCCATCTTCTTTTTCT 59.960 45.455 0.00 0.00 33.74 2.52
4669 13527 2.820197 GGCGGTCCATCTTCTTTTTCTT 59.180 45.455 0.00 0.00 0.00 2.52
4670 13528 3.255888 GGCGGTCCATCTTCTTTTTCTTT 59.744 43.478 0.00 0.00 0.00 2.52
4672 13530 4.798574 CGGTCCATCTTCTTTTTCTTTGG 58.201 43.478 0.00 0.00 0.00 3.28
4676 13534 4.039124 TCCATCTTCTTTTTCTTTGGTGGC 59.961 41.667 0.00 0.00 0.00 5.01
4677 13535 4.039609 CCATCTTCTTTTTCTTTGGTGGCT 59.960 41.667 0.00 0.00 0.00 4.75
4680 13538 1.412343 TCTTTTTCTTTGGTGGCTGCC 59.588 47.619 12.87 12.87 0.00 4.85
4699 13557 2.110213 TGGTGGTGCCGAAGACAC 59.890 61.111 0.00 0.00 41.21 3.67
4700 13558 3.041940 GGTGGTGCCGAAGACACG 61.042 66.667 0.00 0.00 38.98 4.49
4702 13560 2.279851 TGGTGCCGAAGACACGTG 60.280 61.111 15.48 15.48 38.98 4.49
4703 13561 2.028484 GGTGCCGAAGACACGTGA 59.972 61.111 25.01 0.00 38.98 4.35
4704 13562 2.308039 GGTGCCGAAGACACGTGAC 61.308 63.158 25.01 17.23 38.98 3.67
4705 13563 1.590525 GTGCCGAAGACACGTGACA 60.591 57.895 25.01 5.47 0.00 3.58
4706 13564 1.299850 TGCCGAAGACACGTGACAG 60.300 57.895 25.01 11.44 0.00 3.51
4707 13565 1.007734 GCCGAAGACACGTGACAGA 60.008 57.895 25.01 0.00 0.00 3.41
4708 13566 1.276145 GCCGAAGACACGTGACAGAC 61.276 60.000 25.01 10.36 0.00 3.51
4717 13575 2.016704 CGTGACAGACGCTGGTGTC 61.017 63.158 10.80 6.21 42.21 3.67
4719 13577 4.750460 GACAGACGCTGGTGTCAA 57.250 55.556 15.24 0.00 42.31 3.18
4722 13580 1.301244 CAGACGCTGGTGTCAAGCT 60.301 57.895 15.24 0.00 41.41 3.74
4724 13582 0.679505 AGACGCTGGTGTCAAGCTTA 59.320 50.000 15.24 0.00 41.41 3.09
4727 13585 2.289547 GACGCTGGTGTCAAGCTTAAAA 59.710 45.455 0.00 0.00 38.75 1.52
4728 13586 2.884639 ACGCTGGTGTCAAGCTTAAAAT 59.115 40.909 0.00 0.00 0.00 1.82
4729 13587 3.236816 CGCTGGTGTCAAGCTTAAAATG 58.763 45.455 0.00 0.00 0.00 2.32
4730 13588 3.304659 CGCTGGTGTCAAGCTTAAAATGT 60.305 43.478 0.00 0.00 0.00 2.71
4731 13589 4.620982 GCTGGTGTCAAGCTTAAAATGTT 58.379 39.130 0.00 0.00 0.00 2.71
4734 13592 6.293955 GCTGGTGTCAAGCTTAAAATGTTCTA 60.294 38.462 0.00 0.00 0.00 2.10
4736 13594 7.816640 TGGTGTCAAGCTTAAAATGTTCTATC 58.183 34.615 0.00 0.00 0.00 2.08
4738 13596 8.462016 GGTGTCAAGCTTAAAATGTTCTATCAT 58.538 33.333 0.00 0.00 0.00 2.45
4739 13597 9.495754 GTGTCAAGCTTAAAATGTTCTATCATC 57.504 33.333 0.00 0.00 0.00 2.92
4740 13598 9.453572 TGTCAAGCTTAAAATGTTCTATCATCT 57.546 29.630 0.00 0.00 0.00 2.90
4760 13618 7.751732 TCATCTTTTCAGTTTTATCATGTCGG 58.248 34.615 0.00 0.00 0.00 4.79
4761 13619 7.390440 TCATCTTTTCAGTTTTATCATGTCGGT 59.610 33.333 0.00 0.00 0.00 4.69
4763 13621 5.873179 TTTCAGTTTTATCATGTCGGTCC 57.127 39.130 0.00 0.00 0.00 4.46
4764 13622 4.819105 TCAGTTTTATCATGTCGGTCCT 57.181 40.909 0.00 0.00 0.00 3.85
4765 13623 5.160607 TCAGTTTTATCATGTCGGTCCTT 57.839 39.130 0.00 0.00 0.00 3.36
4766 13624 6.288941 TCAGTTTTATCATGTCGGTCCTTA 57.711 37.500 0.00 0.00 0.00 2.69
4767 13625 6.103997 TCAGTTTTATCATGTCGGTCCTTAC 58.896 40.000 0.00 0.00 0.00 2.34
4768 13626 5.872617 CAGTTTTATCATGTCGGTCCTTACA 59.127 40.000 0.00 0.00 0.00 2.41
4769 13627 6.538742 CAGTTTTATCATGTCGGTCCTTACAT 59.461 38.462 0.00 1.78 36.78 2.29
4776 13634 2.631062 TGTCGGTCCTTACATGACTTGT 59.369 45.455 0.00 0.00 42.62 3.16
4777 13635 3.827876 TGTCGGTCCTTACATGACTTGTA 59.172 43.478 0.00 0.00 39.87 2.41
4779 13637 4.082354 GTCGGTCCTTACATGACTTGTACT 60.082 45.833 0.00 0.00 40.53 2.73
4780 13638 4.525487 TCGGTCCTTACATGACTTGTACTT 59.475 41.667 0.00 0.00 40.53 2.24
4781 13639 4.863131 CGGTCCTTACATGACTTGTACTTC 59.137 45.833 0.00 0.00 40.53 3.01
4782 13640 4.863131 GGTCCTTACATGACTTGTACTTCG 59.137 45.833 0.00 0.00 40.53 3.79
4783 13641 5.336213 GGTCCTTACATGACTTGTACTTCGA 60.336 44.000 0.00 0.00 40.53 3.71
4784 13642 6.154445 GTCCTTACATGACTTGTACTTCGAA 58.846 40.000 0.00 0.00 40.53 3.71
4785 13643 6.089150 GTCCTTACATGACTTGTACTTCGAAC 59.911 42.308 0.00 0.00 40.53 3.95
4786 13644 6.015688 TCCTTACATGACTTGTACTTCGAACT 60.016 38.462 0.00 0.00 40.53 3.01
4787 13645 6.645415 CCTTACATGACTTGTACTTCGAACTT 59.355 38.462 0.00 0.00 40.53 2.66
4788 13646 7.811236 CCTTACATGACTTGTACTTCGAACTTA 59.189 37.037 0.00 0.00 40.53 2.24
4789 13647 8.511465 TTACATGACTTGTACTTCGAACTTAC 57.489 34.615 0.00 0.00 40.53 2.34
4791 13649 5.422666 TGACTTGTACTTCGAACTTACGA 57.577 39.130 0.00 0.00 40.55 3.43
4792 13650 6.005583 TGACTTGTACTTCGAACTTACGAT 57.994 37.500 0.00 0.00 41.82 3.73
4793 13651 7.132694 TGACTTGTACTTCGAACTTACGATA 57.867 36.000 0.00 0.00 41.82 2.92
4794 13652 7.755591 TGACTTGTACTTCGAACTTACGATAT 58.244 34.615 0.00 0.00 41.82 1.63
4795 13653 8.882736 TGACTTGTACTTCGAACTTACGATATA 58.117 33.333 0.00 0.00 41.82 0.86
4796 13654 9.708222 GACTTGTACTTCGAACTTACGATATAA 57.292 33.333 0.00 0.00 41.82 0.98
4846 14014 3.057876 CAGTAGATCTGACGAGGGCATAC 60.058 52.174 5.18 0.00 46.27 2.39
4847 14015 2.373335 AGATCTGACGAGGGCATACT 57.627 50.000 0.00 0.00 0.00 2.12
4848 14016 3.510531 AGATCTGACGAGGGCATACTA 57.489 47.619 0.00 0.00 0.00 1.82
4897 14074 1.220749 CGGGGAAATCGGCAGAAGA 59.779 57.895 0.00 0.00 0.00 2.87
4908 14085 0.586802 GGCAGAAGAAAAACGCGACT 59.413 50.000 15.93 0.00 0.00 4.18
4909 14086 1.398578 GGCAGAAGAAAAACGCGACTC 60.399 52.381 15.93 3.00 0.00 3.36
4910 14087 1.260561 GCAGAAGAAAAACGCGACTCA 59.739 47.619 15.93 0.00 0.00 3.41
4911 14088 2.892613 CAGAAGAAAAACGCGACTCAC 58.107 47.619 15.93 0.66 0.00 3.51
4915 14092 0.511653 GAAAAACGCGACTCACCTCC 59.488 55.000 15.93 0.00 0.00 4.30
4926 14131 4.463879 CACCTCCCTCTGCGGCAG 62.464 72.222 23.72 23.72 0.00 4.85
4962 14167 2.974698 GCGCGATCCAATGGAGGG 60.975 66.667 12.10 4.67 34.05 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.004555 TGGCTACCTCGAATTACAATATGAT 57.995 36.000 0.00 0.00 0.00 2.45
7 8 6.413783 TGGCTACCTCGAATTACAATATGA 57.586 37.500 0.00 0.00 0.00 2.15
11 12 4.275936 GCATTGGCTACCTCGAATTACAAT 59.724 41.667 0.00 0.00 36.96 2.71
26 27 2.985282 CACCACGTGGCATTGGCT 60.985 61.111 34.26 10.41 40.87 4.75
36 37 1.822186 GGTTGGAAGCACACCACGT 60.822 57.895 0.00 0.00 37.13 4.49
44 2080 1.999648 AGCAATTGAGGTTGGAAGCA 58.000 45.000 10.34 0.00 0.00 3.91
72 2108 2.257207 TCATCTTCGAGGACAAGGGTT 58.743 47.619 0.00 0.00 0.00 4.11
105 2141 1.275010 TGATGCGTACCAAAGAGCAGA 59.725 47.619 0.00 0.00 43.20 4.26
106 2142 1.662629 CTGATGCGTACCAAAGAGCAG 59.337 52.381 0.00 0.00 43.20 4.24
107 2143 1.001974 ACTGATGCGTACCAAAGAGCA 59.998 47.619 0.00 0.00 44.13 4.26
118 2154 1.139989 CACGACAAGAACTGATGCGT 58.860 50.000 0.00 0.00 33.51 5.24
121 2157 2.476619 GTCACCACGACAAGAACTGATG 59.523 50.000 0.00 0.00 44.69 3.07
122 2158 2.755650 GTCACCACGACAAGAACTGAT 58.244 47.619 0.00 0.00 44.69 2.90
123 2159 2.218953 GTCACCACGACAAGAACTGA 57.781 50.000 0.00 0.00 44.69 3.41
135 2172 6.682362 GCCTAATAGTACAAGTAGGTCACCAC 60.682 46.154 13.99 0.00 36.31 4.16
141 2178 4.826183 CGGAGCCTAATAGTACAAGTAGGT 59.174 45.833 13.99 4.94 36.31 3.08
154 2191 1.794714 AGATGTGGTCGGAGCCTAAT 58.205 50.000 4.54 0.00 0.00 1.73
155 2192 2.029623 GTAGATGTGGTCGGAGCCTAA 58.970 52.381 4.54 0.00 0.00 2.69
202 2239 1.199615 GAGGAGGAGTTGAAGGGGAG 58.800 60.000 0.00 0.00 0.00 4.30
203 2245 0.252742 GGAGGAGGAGTTGAAGGGGA 60.253 60.000 0.00 0.00 0.00 4.81
218 2260 1.333636 ATCAAGCGTGAGAGGGGAGG 61.334 60.000 8.63 0.00 37.14 4.30
225 2267 1.447838 GGCGGAATCAAGCGTGAGA 60.448 57.895 8.63 0.00 37.14 3.27
300 2342 1.634702 GAGCTTCCTTGCGTCTACTG 58.365 55.000 0.00 0.00 38.13 2.74
308 2350 2.361737 GGTGGGGAGCTTCCTTGC 60.362 66.667 11.94 1.07 36.57 4.01
350 4665 2.226437 GGCGTCATCATCAAGTGTGTTT 59.774 45.455 0.00 0.00 0.00 2.83
380 4697 1.079405 TAAGGCGTCTTTCGGGCAG 60.079 57.895 7.97 0.00 40.26 4.85
398 4715 6.295916 CCTTGTCATAGGTCCACTCTTAAAGT 60.296 42.308 0.00 0.00 39.44 2.66
405 4722 3.452627 ACATCCTTGTCATAGGTCCACTC 59.547 47.826 0.00 0.00 36.63 3.51
407 4724 3.535561 CACATCCTTGTCATAGGTCCAC 58.464 50.000 0.00 0.00 36.63 4.02
412 4729 3.199880 GGACCACATCCTTGTCATAGG 57.800 52.381 0.00 0.00 45.22 2.57
433 4750 1.222936 GAGTGGCACATGGGAGGAG 59.777 63.158 21.41 0.00 44.52 3.69
439 4756 0.677731 AATGGACGAGTGGCACATGG 60.678 55.000 21.41 10.57 44.52 3.66
528 7143 7.408132 TTTCTTCGTTCTCATACTCTTTGTG 57.592 36.000 0.00 0.00 0.00 3.33
557 7173 7.067859 CCTCAAATGAAGCCTTAGAATCATTCA 59.932 37.037 0.00 0.00 40.58 2.57
616 7235 6.142818 TCTGTCAAATTCGGTTGATTTGTT 57.857 33.333 8.79 0.00 39.61 2.83
627 7246 6.237279 CGGCAACATAATTTCTGTCAAATTCG 60.237 38.462 0.00 0.00 32.64 3.34
635 7254 4.526970 AGGATCGGCAACATAATTTCTGT 58.473 39.130 0.00 0.00 0.00 3.41
641 7260 3.864789 AAGGAGGATCGGCAACATAAT 57.135 42.857 0.00 0.00 34.37 1.28
644 7263 2.094675 CAAAAGGAGGATCGGCAACAT 58.905 47.619 0.00 0.00 34.37 2.71
652 7271 1.003233 ACACCGGACAAAAGGAGGATC 59.997 52.381 9.46 0.00 0.00 3.36
654 7273 0.395312 GACACCGGACAAAAGGAGGA 59.605 55.000 9.46 0.00 0.00 3.71
657 7276 1.595929 GCGACACCGGACAAAAGGA 60.596 57.895 9.46 0.00 36.06 3.36
675 7294 4.988598 AGCTGGCGTGTTGACCGG 62.989 66.667 0.00 0.00 35.26 5.28
676 7295 3.716006 CAGCTGGCGTGTTGACCG 61.716 66.667 5.57 0.00 0.00 4.79
677 7296 2.280797 TCAGCTGGCGTGTTGACC 60.281 61.111 15.13 0.00 0.00 4.02
684 7326 0.035317 TTGAATGTCTCAGCTGGCGT 59.965 50.000 15.13 3.35 34.81 5.68
701 7343 1.729131 GTTGTCGCGGTGCCATTTG 60.729 57.895 6.13 0.00 0.00 2.32
710 7352 0.661020 AGGTTCAAAAGTTGTCGCGG 59.339 50.000 6.13 0.00 0.00 6.46
711 7353 1.329292 TCAGGTTCAAAAGTTGTCGCG 59.671 47.619 0.00 0.00 0.00 5.87
717 7359 6.774656 ATCTGAGTCATTCAGGTTCAAAAGTT 59.225 34.615 0.00 0.00 45.09 2.66
719 7361 6.814506 ATCTGAGTCATTCAGGTTCAAAAG 57.185 37.500 0.00 0.00 45.09 2.27
734 7376 4.387256 GGCATTGATAGCGTAATCTGAGTC 59.613 45.833 0.00 0.00 0.00 3.36
739 7381 5.984695 TCTAGGCATTGATAGCGTAATCT 57.015 39.130 0.00 0.00 32.70 2.40
742 7386 5.722021 TCATCTAGGCATTGATAGCGTAA 57.278 39.130 0.00 0.00 32.70 3.18
744 7388 4.221482 TCATCATCTAGGCATTGATAGCGT 59.779 41.667 0.00 0.00 0.00 5.07
746 7390 7.627298 AAATCATCATCTAGGCATTGATAGC 57.373 36.000 0.00 0.00 0.00 2.97
749 7393 8.473358 TTGAAAATCATCATCTAGGCATTGAT 57.527 30.769 0.00 0.00 0.00 2.57
754 7398 5.759059 ACCTTGAAAATCATCATCTAGGCA 58.241 37.500 0.00 0.00 38.95 4.75
760 7404 9.298774 GATCTTGAAACCTTGAAAATCATCATC 57.701 33.333 0.00 0.00 0.00 2.92
762 7406 8.413309 AGATCTTGAAACCTTGAAAATCATCA 57.587 30.769 0.00 0.00 0.00 3.07
765 7409 9.300681 ACATAGATCTTGAAACCTTGAAAATCA 57.699 29.630 0.00 0.00 0.00 2.57
766 7410 9.565213 CACATAGATCTTGAAACCTTGAAAATC 57.435 33.333 0.00 0.00 0.00 2.17
815 7460 6.042638 AGTGAAGTGCATTGTACTATGTCT 57.957 37.500 16.86 12.86 0.00 3.41
822 7467 7.602517 ATCTTTAGAGTGAAGTGCATTGTAC 57.397 36.000 0.00 0.00 0.00 2.90
841 7489 5.183904 GGCCTCACACTATGTCAAAATCTTT 59.816 40.000 0.00 0.00 0.00 2.52
842 7490 4.702131 GGCCTCACACTATGTCAAAATCTT 59.298 41.667 0.00 0.00 0.00 2.40
843 7491 4.265073 GGCCTCACACTATGTCAAAATCT 58.735 43.478 0.00 0.00 0.00 2.40
844 7492 3.378427 GGGCCTCACACTATGTCAAAATC 59.622 47.826 0.84 0.00 0.00 2.17
845 7493 3.356290 GGGCCTCACACTATGTCAAAAT 58.644 45.455 0.84 0.00 0.00 1.82
850 7498 1.144057 CGGGGCCTCACACTATGTC 59.856 63.158 1.96 0.00 0.00 3.06
852 7500 1.443407 CTCGGGGCCTCACACTATG 59.557 63.158 1.96 0.00 0.00 2.23
854 7502 2.363795 CCTCGGGGCCTCACACTA 60.364 66.667 1.96 0.00 0.00 2.74
901 7562 3.071167 TGGATGCTTGGATCTGATCTGAG 59.929 47.826 16.61 14.54 0.00 3.35
938 7599 4.329545 TGGAGCCGTGGGAGTTGC 62.330 66.667 0.00 0.00 0.00 4.17
1066 7727 0.893727 GAGGCGGAGGGAGAGAGATC 60.894 65.000 0.00 0.00 0.00 2.75
1067 7728 1.152830 GAGGCGGAGGGAGAGAGAT 59.847 63.158 0.00 0.00 0.00 2.75
1068 7729 2.598467 GAGGCGGAGGGAGAGAGA 59.402 66.667 0.00 0.00 0.00 3.10
1069 7730 2.520741 GGAGGCGGAGGGAGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
1395 8068 2.492090 CAGAAGTCGAGCGAGGGG 59.508 66.667 0.00 0.00 0.00 4.79
1492 8165 2.833582 GGCGGAGGGATCTGACGA 60.834 66.667 0.00 0.00 0.00 4.20
1686 8359 3.056465 AGTTCTTGTCGAAGATGGAGTCC 60.056 47.826 0.73 0.73 40.67 3.85
1899 8572 1.341852 TCGTTCATCACCACCTCGAAA 59.658 47.619 0.00 0.00 0.00 3.46
1932 8605 1.301637 CACAGCCACCATCACGTGA 60.302 57.895 22.48 22.48 35.68 4.35
1986 8659 1.494960 ACTTCTGCAGATCCCTCTCC 58.505 55.000 19.04 0.00 0.00 3.71
2029 8702 2.592993 CCCACTTCTTCCCAGCGGA 61.593 63.158 0.00 0.00 35.88 5.54
2144 8817 4.650754 AGATGCAAATTCTCAATGGAGC 57.349 40.909 0.00 0.00 41.13 4.70
2152 8825 9.434420 AGCTGTATCTATAAGATGCAAATTCTC 57.566 33.333 8.67 0.00 44.62 2.87
2204 8887 7.441017 AGTCTAAATCAGCAGGATATCTGTTC 58.559 38.462 2.05 0.00 45.08 3.18
2303 8986 5.660864 TCAAATCAACCTTTCTCCTTTTGGT 59.339 36.000 0.00 0.00 41.38 3.67
2379 9064 9.990360 TTTATAAGTTATCTCACGCATAATCCA 57.010 29.630 0.00 0.00 0.00 3.41
2443 9128 5.848406 TGTAAACATGGGGAATTGTTTGAC 58.152 37.500 10.40 6.36 43.76 3.18
2506 9191 7.607991 GCCACTTGATAATATAGCACCAATACT 59.392 37.037 0.00 0.00 0.00 2.12
2507 9192 7.390440 TGCCACTTGATAATATAGCACCAATAC 59.610 37.037 0.00 0.00 0.00 1.89
2513 9201 6.618287 TGTTGCCACTTGATAATATAGCAC 57.382 37.500 0.00 0.00 0.00 4.40
2545 9233 6.954297 GTCGATACTTGCTAGCTTAAAAACAC 59.046 38.462 17.23 1.16 0.00 3.32
2685 9375 5.069516 CCCTTCCATATCCAAATGAGGTTTG 59.930 44.000 0.00 0.00 45.44 2.93
2688 9378 4.054369 TCCCTTCCATATCCAAATGAGGT 58.946 43.478 0.00 0.00 0.00 3.85
2745 9436 6.620877 TTCAGTCATAGAAGTTATGGTGGT 57.379 37.500 0.00 0.00 0.00 4.16
2883 9575 1.453928 GACCATACCAAGGCCAGCC 60.454 63.158 5.01 0.00 0.00 4.85
2990 9682 0.179009 GGCTTATGCTCATGGCTGGA 60.179 55.000 7.54 0.00 42.39 3.86
3072 9764 8.239681 TCAATCATCGTAAAGTCACACTAAAG 57.760 34.615 0.00 0.00 0.00 1.85
3101 9793 2.536761 TGTAGGGCACTGTGTAACAC 57.463 50.000 9.86 4.08 45.67 3.32
3147 9843 2.956799 TTTCTCGCCAAGCACCTGCA 62.957 55.000 0.00 0.00 45.16 4.41
3160 9856 4.398247 CCATTTTCTCGAAAGCTTTCTCG 58.602 43.478 30.91 22.52 35.07 4.04
3286 9982 6.129009 GCACAAGAGCAACTAATTTTGTCATG 60.129 38.462 0.00 0.00 0.00 3.07
3337 10033 3.623906 ACATGTGAGCTCAGCTTGTAT 57.376 42.857 18.89 2.34 39.88 2.29
3365 10061 3.821748 ACCAAGAGGAAGAAACAAGGTC 58.178 45.455 0.00 0.00 38.69 3.85
3368 10064 4.640201 TGTGAACCAAGAGGAAGAAACAAG 59.360 41.667 0.00 0.00 38.69 3.16
3418 10114 4.813161 CCTACAGTTCAACATGGATAGCAG 59.187 45.833 0.00 0.00 0.00 4.24
3430 10126 0.391228 TGAGCGTGCCTACAGTTCAA 59.609 50.000 0.00 0.00 0.00 2.69
3438 10134 2.248280 TCAGTTTTTGAGCGTGCCTA 57.752 45.000 0.00 0.00 0.00 3.93
3443 10139 1.335324 GCAGCATCAGTTTTTGAGCGT 60.335 47.619 0.00 0.00 39.68 5.07
3449 10145 2.744202 CGTCCTAGCAGCATCAGTTTTT 59.256 45.455 0.00 0.00 0.00 1.94
3497 10193 1.757306 CTGCCTGACACCCTGAAGT 59.243 57.895 0.00 0.00 0.00 3.01
3578 10274 2.898840 CGGAGTACCTCGGCGCTA 60.899 66.667 7.64 0.00 0.00 4.26
3605 10301 0.179097 GCCGATTCCGCTCTTTCTCT 60.179 55.000 0.00 0.00 0.00 3.10
3774 10475 8.515695 TTGATTCTCATAACAGCAAATCTGAT 57.484 30.769 0.00 0.00 45.72 2.90
3782 10483 3.860641 TCGCTTGATTCTCATAACAGCA 58.139 40.909 0.00 0.00 0.00 4.41
3841 10542 1.002900 ACATGCGACGAAAACACTTGG 60.003 47.619 0.00 0.00 0.00 3.61
3871 10572 1.067060 TGCACCCGAATCAGATAGACG 59.933 52.381 0.00 0.00 0.00 4.18
3948 10654 7.043961 TCTGACCACAGATCTATCAACATAC 57.956 40.000 0.00 0.00 46.55 2.39
4022 10732 2.687700 AGTGAGCATTGACAGGCTAG 57.312 50.000 3.93 0.00 41.22 3.42
4031 10741 5.352284 AGGATACGAGTAAAGTGAGCATTG 58.648 41.667 0.00 0.00 46.39 2.82
4046 10756 2.112998 CAGTGGGGGTAAAGGATACGA 58.887 52.381 0.00 0.00 46.39 3.43
4048 10758 1.133884 GCCAGTGGGGGTAAAGGATAC 60.134 57.143 12.15 0.00 37.04 2.24
4058 10773 1.815408 CGATTATTCAGCCAGTGGGGG 60.815 57.143 12.15 0.00 37.04 5.40
4076 10791 0.730265 GATAAAACATGCCGCCACGA 59.270 50.000 0.00 0.00 0.00 4.35
4082 10797 5.046910 ACTGAAACAGATAAAACATGCCG 57.953 39.130 5.76 0.00 35.18 5.69
4083 10798 7.147976 AGAAACTGAAACAGATAAAACATGCC 58.852 34.615 5.76 0.00 35.18 4.40
4144 11025 9.265901 GAGTAACACAGTATAGCATCATCAAAT 57.734 33.333 0.00 0.00 0.00 2.32
4198 11079 2.827322 AGGAGAGCAGAGCATAGCATAG 59.173 50.000 0.00 0.00 0.00 2.23
4280 11170 0.249657 GACCTAGAATGCTCCAGCGG 60.250 60.000 0.00 0.00 45.83 5.52
4312 11202 6.516739 CCGAAGAGGCTGATTATACTATCA 57.483 41.667 0.00 0.00 33.66 2.15
4349 11420 0.525761 GCATTTTGTAAGCCCGCTGA 59.474 50.000 0.00 0.00 0.00 4.26
4355 11426 0.525761 TCCTGCGCATTTTGTAAGCC 59.474 50.000 12.24 0.00 0.00 4.35
4356 11427 1.900237 CTCCTGCGCATTTTGTAAGC 58.100 50.000 12.24 0.00 0.00 3.09
4357 11428 1.470098 AGCTCCTGCGCATTTTGTAAG 59.530 47.619 12.24 0.00 45.42 2.34
4359 11430 2.394930 TAGCTCCTGCGCATTTTGTA 57.605 45.000 12.24 0.00 45.42 2.41
4360 11431 1.402968 CATAGCTCCTGCGCATTTTGT 59.597 47.619 12.24 0.00 45.42 2.83
4361 11432 1.402968 ACATAGCTCCTGCGCATTTTG 59.597 47.619 12.24 0.00 45.42 2.44
4362 11433 1.755179 ACATAGCTCCTGCGCATTTT 58.245 45.000 12.24 0.00 45.42 1.82
4363 11434 1.755179 AACATAGCTCCTGCGCATTT 58.245 45.000 12.24 0.00 45.42 2.32
4364 11435 1.755179 AAACATAGCTCCTGCGCATT 58.245 45.000 12.24 0.00 45.42 3.56
4365 11436 1.402968 CAAAACATAGCTCCTGCGCAT 59.597 47.619 12.24 0.00 45.42 4.73
4367 11438 0.524180 GCAAAACATAGCTCCTGCGC 60.524 55.000 0.00 0.00 45.42 6.09
4369 11440 1.133790 CCTGCAAAACATAGCTCCTGC 59.866 52.381 0.00 0.00 40.05 4.85
4374 13232 1.272092 TGGCTCCTGCAAAACATAGCT 60.272 47.619 0.00 0.00 41.91 3.32
4381 13239 3.557228 AAAAACATGGCTCCTGCAAAA 57.443 38.095 0.00 0.00 41.91 2.44
4398 13256 7.777095 ACTGTAATGCTAAGTTTGGTCAAAAA 58.223 30.769 0.00 0.00 31.33 1.94
4399 13257 7.341445 ACTGTAATGCTAAGTTTGGTCAAAA 57.659 32.000 0.00 0.00 31.33 2.44
4400 13258 6.952773 ACTGTAATGCTAAGTTTGGTCAAA 57.047 33.333 0.00 0.00 0.00 2.69
4401 13259 6.146510 CGTACTGTAATGCTAAGTTTGGTCAA 59.853 38.462 0.00 0.00 0.00 3.18
4402 13260 5.636121 CGTACTGTAATGCTAAGTTTGGTCA 59.364 40.000 0.00 0.00 0.00 4.02
4404 13262 4.933400 CCGTACTGTAATGCTAAGTTTGGT 59.067 41.667 0.00 0.00 0.00 3.67
4405 13263 5.172934 TCCGTACTGTAATGCTAAGTTTGG 58.827 41.667 0.00 0.00 0.00 3.28
4407 13265 5.346822 CGTTCCGTACTGTAATGCTAAGTTT 59.653 40.000 0.00 0.00 0.00 2.66
4409 13267 4.082571 ACGTTCCGTACTGTAATGCTAAGT 60.083 41.667 0.00 0.00 38.73 2.24
4410 13268 4.264614 CACGTTCCGTACTGTAATGCTAAG 59.735 45.833 0.00 0.00 38.32 2.18
4411 13269 4.168014 CACGTTCCGTACTGTAATGCTAA 58.832 43.478 0.00 0.00 38.32 3.09
4412 13270 3.191162 ACACGTTCCGTACTGTAATGCTA 59.809 43.478 0.00 0.00 38.32 3.49
4413 13271 2.029649 ACACGTTCCGTACTGTAATGCT 60.030 45.455 0.00 0.00 38.32 3.79
4415 13273 2.091588 GCACACGTTCCGTACTGTAATG 59.908 50.000 0.00 0.00 38.32 1.90
4416 13274 2.029649 AGCACACGTTCCGTACTGTAAT 60.030 45.455 0.00 0.00 38.32 1.89
4419 13277 0.953727 TAGCACACGTTCCGTACTGT 59.046 50.000 0.00 0.00 38.32 3.55
4420 13278 1.198408 TCTAGCACACGTTCCGTACTG 59.802 52.381 0.00 0.00 38.32 2.74
4423 13281 3.247442 CAAATCTAGCACACGTTCCGTA 58.753 45.455 0.00 0.00 38.32 4.02
4424 13282 2.066262 CAAATCTAGCACACGTTCCGT 58.934 47.619 0.00 0.00 42.36 4.69
4425 13283 2.066262 ACAAATCTAGCACACGTTCCG 58.934 47.619 0.00 0.00 0.00 4.30
4426 13284 2.159627 CCACAAATCTAGCACACGTTCC 59.840 50.000 0.00 0.00 0.00 3.62
4428 13286 2.846193 ACCACAAATCTAGCACACGTT 58.154 42.857 0.00 0.00 0.00 3.99
4429 13287 2.543777 ACCACAAATCTAGCACACGT 57.456 45.000 0.00 0.00 0.00 4.49
4430 13288 2.805671 TCAACCACAAATCTAGCACACG 59.194 45.455 0.00 0.00 0.00 4.49
4432 13290 3.758023 CCATCAACCACAAATCTAGCACA 59.242 43.478 0.00 0.00 0.00 4.57
4433 13291 4.009675 TCCATCAACCACAAATCTAGCAC 58.990 43.478 0.00 0.00 0.00 4.40
4434 13292 4.299586 TCCATCAACCACAAATCTAGCA 57.700 40.909 0.00 0.00 0.00 3.49
4436 13294 4.037208 GCCATCCATCAACCACAAATCTAG 59.963 45.833 0.00 0.00 0.00 2.43
4437 13295 3.953612 GCCATCCATCAACCACAAATCTA 59.046 43.478 0.00 0.00 0.00 1.98
4438 13296 2.762327 GCCATCCATCAACCACAAATCT 59.238 45.455 0.00 0.00 0.00 2.40
4439 13297 2.480073 CGCCATCCATCAACCACAAATC 60.480 50.000 0.00 0.00 0.00 2.17
4441 13299 0.887247 CGCCATCCATCAACCACAAA 59.113 50.000 0.00 0.00 0.00 2.83
4445 13303 2.275089 CCCGCCATCCATCAACCA 59.725 61.111 0.00 0.00 0.00 3.67
4446 13304 2.120909 CACCCGCCATCCATCAACC 61.121 63.158 0.00 0.00 0.00 3.77
4448 13306 2.148723 AACCACCCGCCATCCATCAA 62.149 55.000 0.00 0.00 0.00 2.57
4449 13307 2.148723 AAACCACCCGCCATCCATCA 62.149 55.000 0.00 0.00 0.00 3.07
4450 13308 1.379843 AAACCACCCGCCATCCATC 60.380 57.895 0.00 0.00 0.00 3.51
4451 13309 1.379843 GAAACCACCCGCCATCCAT 60.380 57.895 0.00 0.00 0.00 3.41
4452 13310 2.034999 GAAACCACCCGCCATCCA 59.965 61.111 0.00 0.00 0.00 3.41
4454 13312 0.455815 GAATGAAACCACCCGCCATC 59.544 55.000 0.00 0.00 0.00 3.51
4455 13313 0.039618 AGAATGAAACCACCCGCCAT 59.960 50.000 0.00 0.00 0.00 4.40
4456 13314 0.178975 AAGAATGAAACCACCCGCCA 60.179 50.000 0.00 0.00 0.00 5.69
4457 13315 0.526211 GAAGAATGAAACCACCCGCC 59.474 55.000 0.00 0.00 0.00 6.13
4459 13317 0.802494 CCGAAGAATGAAACCACCCG 59.198 55.000 0.00 0.00 0.00 5.28
4462 13320 3.139077 AGACACCGAAGAATGAAACCAC 58.861 45.455 0.00 0.00 0.00 4.16
4463 13321 3.485463 AGACACCGAAGAATGAAACCA 57.515 42.857 0.00 0.00 0.00 3.67
4464 13322 4.995487 ACTAAGACACCGAAGAATGAAACC 59.005 41.667 0.00 0.00 0.00 3.27
4465 13323 5.164080 CGACTAAGACACCGAAGAATGAAAC 60.164 44.000 0.00 0.00 0.00 2.78
4466 13324 4.921515 CGACTAAGACACCGAAGAATGAAA 59.078 41.667 0.00 0.00 0.00 2.69
4467 13325 4.022589 ACGACTAAGACACCGAAGAATGAA 60.023 41.667 0.00 0.00 0.00 2.57
4468 13326 3.504906 ACGACTAAGACACCGAAGAATGA 59.495 43.478 0.00 0.00 0.00 2.57
4469 13327 3.608506 CACGACTAAGACACCGAAGAATG 59.391 47.826 0.00 0.00 0.00 2.67
4470 13328 3.504906 TCACGACTAAGACACCGAAGAAT 59.495 43.478 0.00 0.00 0.00 2.40
4471 13329 2.880268 TCACGACTAAGACACCGAAGAA 59.120 45.455 0.00 0.00 0.00 2.52
4472 13330 2.497138 TCACGACTAAGACACCGAAGA 58.503 47.619 0.00 0.00 0.00 2.87
4474 13332 2.094906 CCATCACGACTAAGACACCGAA 60.095 50.000 0.00 0.00 0.00 4.30
4475 13333 1.471287 CCATCACGACTAAGACACCGA 59.529 52.381 0.00 0.00 0.00 4.69
4477 13335 1.134788 CCCCATCACGACTAAGACACC 60.135 57.143 0.00 0.00 0.00 4.16
4481 13339 0.535335 GCACCCCATCACGACTAAGA 59.465 55.000 0.00 0.00 0.00 2.10
4483 13341 1.855295 TAGCACCCCATCACGACTAA 58.145 50.000 0.00 0.00 0.00 2.24
4485 13343 0.981183 TTTAGCACCCCATCACGACT 59.019 50.000 0.00 0.00 0.00 4.18
4486 13344 1.940613 GATTTAGCACCCCATCACGAC 59.059 52.381 0.00 0.00 0.00 4.34
4489 13347 5.193679 ACTTTAGATTTAGCACCCCATCAC 58.806 41.667 0.00 0.00 0.00 3.06
4490 13348 5.450818 ACTTTAGATTTAGCACCCCATCA 57.549 39.130 0.00 0.00 0.00 3.07
4491 13349 5.885912 TGAACTTTAGATTTAGCACCCCATC 59.114 40.000 0.00 0.00 0.00 3.51
4493 13351 5.249780 TGAACTTTAGATTTAGCACCCCA 57.750 39.130 0.00 0.00 0.00 4.96
4494 13352 6.405842 CCATTGAACTTTAGATTTAGCACCCC 60.406 42.308 0.00 0.00 0.00 4.95
4495 13353 6.564328 CCATTGAACTTTAGATTTAGCACCC 58.436 40.000 0.00 0.00 0.00 4.61
4496 13354 6.036470 GCCATTGAACTTTAGATTTAGCACC 58.964 40.000 0.00 0.00 0.00 5.01
4498 13356 5.414454 ACGCCATTGAACTTTAGATTTAGCA 59.586 36.000 0.00 0.00 0.00 3.49
4501 13359 6.811253 ACACGCCATTGAACTTTAGATTTA 57.189 33.333 0.00 0.00 0.00 1.40
4502 13360 5.705609 ACACGCCATTGAACTTTAGATTT 57.294 34.783 0.00 0.00 0.00 2.17
4504 13362 5.705609 AAACACGCCATTGAACTTTAGAT 57.294 34.783 0.00 0.00 0.00 1.98
4505 13363 5.180492 CCTAAACACGCCATTGAACTTTAGA 59.820 40.000 0.00 0.00 0.00 2.10
4506 13364 5.390613 CCTAAACACGCCATTGAACTTTAG 58.609 41.667 0.00 0.00 0.00 1.85
4507 13365 4.216687 CCCTAAACACGCCATTGAACTTTA 59.783 41.667 0.00 0.00 0.00 1.85
4508 13366 3.005367 CCCTAAACACGCCATTGAACTTT 59.995 43.478 0.00 0.00 0.00 2.66
4509 13367 2.556622 CCCTAAACACGCCATTGAACTT 59.443 45.455 0.00 0.00 0.00 2.66
4510 13368 2.159382 CCCTAAACACGCCATTGAACT 58.841 47.619 0.00 0.00 0.00 3.01
4512 13370 1.883275 CACCCTAAACACGCCATTGAA 59.117 47.619 0.00 0.00 0.00 2.69
4514 13372 1.243902 ACACCCTAAACACGCCATTG 58.756 50.000 0.00 0.00 0.00 2.82
4515 13373 1.611491 CAACACCCTAAACACGCCATT 59.389 47.619 0.00 0.00 0.00 3.16
4516 13374 1.243902 CAACACCCTAAACACGCCAT 58.756 50.000 0.00 0.00 0.00 4.40
4517 13375 1.448922 GCAACACCCTAAACACGCCA 61.449 55.000 0.00 0.00 0.00 5.69
4518 13376 1.284715 GCAACACCCTAAACACGCC 59.715 57.895 0.00 0.00 0.00 5.68
4519 13377 1.284715 GGCAACACCCTAAACACGC 59.715 57.895 0.00 0.00 0.00 5.34
4529 13387 0.251341 AATCAGACCAGGGCAACACC 60.251 55.000 0.00 0.00 39.74 4.16
4530 13388 1.270550 CAAATCAGACCAGGGCAACAC 59.729 52.381 0.00 0.00 39.74 3.32
4531 13389 1.133513 ACAAATCAGACCAGGGCAACA 60.134 47.619 0.00 0.00 39.74 3.33
4532 13390 1.620822 ACAAATCAGACCAGGGCAAC 58.379 50.000 0.00 0.00 0.00 4.17
4533 13391 2.238521 GAACAAATCAGACCAGGGCAA 58.761 47.619 0.00 0.00 0.00 4.52
4534 13392 1.144708 TGAACAAATCAGACCAGGGCA 59.855 47.619 0.00 0.00 33.04 5.36
4535 13393 1.909700 TGAACAAATCAGACCAGGGC 58.090 50.000 0.00 0.00 33.04 5.19
4536 13394 5.476599 TGTTATTGAACAAATCAGACCAGGG 59.523 40.000 0.00 0.00 42.66 4.45
4537 13395 6.573664 TGTTATTGAACAAATCAGACCAGG 57.426 37.500 0.00 0.00 42.66 4.45
4549 13407 7.759489 AGAGTAAAGCCATTGTTATTGAACA 57.241 32.000 0.00 0.00 43.94 3.18
4550 13408 7.542130 CCAAGAGTAAAGCCATTGTTATTGAAC 59.458 37.037 0.00 0.00 36.00 3.18
4551 13409 7.232534 ACCAAGAGTAAAGCCATTGTTATTGAA 59.767 33.333 0.00 0.00 0.00 2.69
4552 13410 6.719370 ACCAAGAGTAAAGCCATTGTTATTGA 59.281 34.615 0.00 0.00 0.00 2.57
4553 13411 6.808212 CACCAAGAGTAAAGCCATTGTTATTG 59.192 38.462 0.00 0.00 0.00 1.90
4554 13412 6.719370 TCACCAAGAGTAAAGCCATTGTTATT 59.281 34.615 0.00 0.00 0.00 1.40
4555 13413 6.245408 TCACCAAGAGTAAAGCCATTGTTAT 58.755 36.000 0.00 0.00 0.00 1.89
4556 13414 5.626142 TCACCAAGAGTAAAGCCATTGTTA 58.374 37.500 0.00 0.00 0.00 2.41
4557 13415 4.469657 TCACCAAGAGTAAAGCCATTGTT 58.530 39.130 0.00 0.00 0.00 2.83
4558 13416 4.074970 CTCACCAAGAGTAAAGCCATTGT 58.925 43.478 0.00 0.00 39.62 2.71
4559 13417 4.691860 CTCACCAAGAGTAAAGCCATTG 57.308 45.455 0.00 0.00 39.62 2.82
4569 13427 5.364157 ACTTCTAAAGTGACTCACCAAGAGT 59.636 40.000 5.51 0.00 46.89 3.24
4570 13428 5.848406 ACTTCTAAAGTGACTCACCAAGAG 58.152 41.667 5.51 0.00 44.60 2.85
4571 13429 5.221461 GGACTTCTAAAGTGACTCACCAAGA 60.221 44.000 5.51 3.99 43.03 3.02
4572 13430 4.991687 GGACTTCTAAAGTGACTCACCAAG 59.008 45.833 5.51 1.75 43.03 3.61
4573 13431 4.500887 CGGACTTCTAAAGTGACTCACCAA 60.501 45.833 5.51 0.00 43.03 3.67
4574 13432 3.005472 CGGACTTCTAAAGTGACTCACCA 59.995 47.826 5.51 0.00 43.03 4.17
4575 13433 3.576648 CGGACTTCTAAAGTGACTCACC 58.423 50.000 5.51 0.00 43.03 4.02
4576 13434 2.987821 GCGGACTTCTAAAGTGACTCAC 59.012 50.000 0.38 0.38 43.03 3.51
4577 13435 2.626266 TGCGGACTTCTAAAGTGACTCA 59.374 45.455 0.00 0.00 43.03 3.41
4578 13436 3.299340 TGCGGACTTCTAAAGTGACTC 57.701 47.619 0.00 0.00 43.03 3.36
4579 13437 3.746045 TTGCGGACTTCTAAAGTGACT 57.254 42.857 0.00 0.00 43.03 3.41
4580 13438 3.364068 GCTTTGCGGACTTCTAAAGTGAC 60.364 47.826 0.00 0.00 43.03 3.67
4581 13439 2.806244 GCTTTGCGGACTTCTAAAGTGA 59.194 45.455 0.00 0.00 43.03 3.41
4582 13440 2.808543 AGCTTTGCGGACTTCTAAAGTG 59.191 45.455 0.00 0.00 43.03 3.16
4583 13441 2.808543 CAGCTTTGCGGACTTCTAAAGT 59.191 45.455 0.00 0.00 46.38 2.66
4584 13442 2.413371 GCAGCTTTGCGGACTTCTAAAG 60.413 50.000 0.00 0.00 34.22 1.85
4585 13443 1.535462 GCAGCTTTGCGGACTTCTAAA 59.465 47.619 0.00 0.00 0.00 1.85
4586 13444 1.156736 GCAGCTTTGCGGACTTCTAA 58.843 50.000 0.00 0.00 0.00 2.10
4587 13445 0.034756 TGCAGCTTTGCGGACTTCTA 59.965 50.000 0.00 0.00 37.69 2.10
4588 13446 0.607489 ATGCAGCTTTGCGGACTTCT 60.607 50.000 0.00 0.00 37.69 2.85
4589 13447 1.086696 TATGCAGCTTTGCGGACTTC 58.913 50.000 0.00 0.00 37.69 3.01
4590 13448 1.755179 ATATGCAGCTTTGCGGACTT 58.245 45.000 0.00 0.00 37.69 3.01
4591 13449 1.755179 AATATGCAGCTTTGCGGACT 58.245 45.000 0.00 0.00 37.69 3.85
4592 13450 2.603173 GCTAATATGCAGCTTTGCGGAC 60.603 50.000 0.00 0.00 36.07 4.79
4593 13451 1.603802 GCTAATATGCAGCTTTGCGGA 59.396 47.619 0.00 0.00 36.07 5.54
4594 13452 1.661178 CGCTAATATGCAGCTTTGCGG 60.661 52.381 22.68 10.92 40.94 5.69
4595 13453 1.261354 TCGCTAATATGCAGCTTTGCG 59.739 47.619 23.69 23.69 44.19 4.85
4596 13454 3.231965 CATCGCTAATATGCAGCTTTGC 58.768 45.455 7.71 0.00 36.86 3.68
4597 13455 3.499537 TCCATCGCTAATATGCAGCTTTG 59.500 43.478 7.71 5.37 36.86 2.77
4598 13456 3.743521 TCCATCGCTAATATGCAGCTTT 58.256 40.909 7.71 0.00 36.86 3.51
4599 13457 3.407424 TCCATCGCTAATATGCAGCTT 57.593 42.857 7.71 0.00 36.86 3.74
4600 13458 3.407424 TTCCATCGCTAATATGCAGCT 57.593 42.857 7.71 0.00 36.86 4.24
4601 13459 3.181503 CCATTCCATCGCTAATATGCAGC 60.182 47.826 0.00 0.41 35.61 5.25
4602 13460 4.256110 TCCATTCCATCGCTAATATGCAG 58.744 43.478 0.00 0.00 0.00 4.41
4603 13461 4.256110 CTCCATTCCATCGCTAATATGCA 58.744 43.478 0.00 0.00 0.00 3.96
4604 13462 3.064545 GCTCCATTCCATCGCTAATATGC 59.935 47.826 0.00 0.00 0.00 3.14
4605 13463 4.331992 CAGCTCCATTCCATCGCTAATATG 59.668 45.833 0.00 0.00 0.00 1.78
4606 13464 4.511527 CAGCTCCATTCCATCGCTAATAT 58.488 43.478 0.00 0.00 0.00 1.28
4607 13465 3.866066 GCAGCTCCATTCCATCGCTAATA 60.866 47.826 0.00 0.00 0.00 0.98
4608 13466 2.775890 CAGCTCCATTCCATCGCTAAT 58.224 47.619 0.00 0.00 0.00 1.73
4609 13467 1.811558 GCAGCTCCATTCCATCGCTAA 60.812 52.381 0.00 0.00 0.00 3.09
4610 13468 0.250038 GCAGCTCCATTCCATCGCTA 60.250 55.000 0.00 0.00 0.00 4.26
4611 13469 1.525535 GCAGCTCCATTCCATCGCT 60.526 57.895 0.00 0.00 0.00 4.93
4612 13470 1.099879 AAGCAGCTCCATTCCATCGC 61.100 55.000 0.00 0.00 0.00 4.58
4613 13471 0.942962 GAAGCAGCTCCATTCCATCG 59.057 55.000 0.00 0.00 0.00 3.84
4614 13472 0.942962 CGAAGCAGCTCCATTCCATC 59.057 55.000 0.00 0.00 0.00 3.51
4615 13473 0.543277 TCGAAGCAGCTCCATTCCAT 59.457 50.000 0.00 0.00 0.00 3.41
4616 13474 0.324614 TTCGAAGCAGCTCCATTCCA 59.675 50.000 0.00 0.00 0.00 3.53
4617 13475 0.729690 GTTCGAAGCAGCTCCATTCC 59.270 55.000 0.00 0.00 0.00 3.01
4618 13476 1.663135 GAGTTCGAAGCAGCTCCATTC 59.337 52.381 0.00 0.00 0.00 2.67
4619 13477 1.731720 GAGTTCGAAGCAGCTCCATT 58.268 50.000 0.00 0.00 0.00 3.16
4620 13478 0.459237 CGAGTTCGAAGCAGCTCCAT 60.459 55.000 0.00 0.00 43.02 3.41
4621 13479 1.080501 CGAGTTCGAAGCAGCTCCA 60.081 57.895 0.00 0.00 43.02 3.86
4622 13480 1.213013 TCGAGTTCGAAGCAGCTCC 59.787 57.895 0.00 0.00 46.30 4.70
4623 13481 4.870305 TCGAGTTCGAAGCAGCTC 57.130 55.556 0.00 0.25 46.30 4.09
4632 13490 1.137825 GCCTCCTCACTCGAGTTCG 59.862 63.158 17.26 9.61 37.59 3.95
4633 13491 1.137825 CGCCTCCTCACTCGAGTTC 59.862 63.158 17.26 0.00 37.59 3.01
4634 13492 2.344203 CCGCCTCCTCACTCGAGTT 61.344 63.158 17.26 0.00 37.59 3.01
4635 13493 2.752238 CCGCCTCCTCACTCGAGT 60.752 66.667 13.58 13.58 37.59 4.18
4636 13494 2.752238 ACCGCCTCCTCACTCGAG 60.752 66.667 11.84 11.84 39.16 4.04
4637 13495 2.750637 GACCGCCTCCTCACTCGA 60.751 66.667 0.00 0.00 0.00 4.04
4638 13496 3.827898 GGACCGCCTCCTCACTCG 61.828 72.222 0.00 0.00 35.89 4.18
4639 13497 2.022240 GATGGACCGCCTCCTCACTC 62.022 65.000 0.00 0.00 40.26 3.51
4640 13498 2.039624 ATGGACCGCCTCCTCACT 59.960 61.111 0.00 0.00 40.26 3.41
4641 13499 1.617947 AAGATGGACCGCCTCCTCAC 61.618 60.000 0.00 0.00 40.26 3.51
4642 13500 1.306141 AAGATGGACCGCCTCCTCA 60.306 57.895 0.00 0.00 40.26 3.86
4643 13501 1.045911 AGAAGATGGACCGCCTCCTC 61.046 60.000 0.00 0.00 40.26 3.71
4644 13502 0.618968 AAGAAGATGGACCGCCTCCT 60.619 55.000 0.00 0.00 40.26 3.69
4645 13503 0.253327 AAAGAAGATGGACCGCCTCC 59.747 55.000 0.00 0.00 39.97 4.30
4646 13504 2.115343 AAAAGAAGATGGACCGCCTC 57.885 50.000 0.00 0.00 34.31 4.70
4647 13505 2.040412 AGAAAAAGAAGATGGACCGCCT 59.960 45.455 0.00 0.00 34.31 5.52
4648 13506 2.437413 AGAAAAAGAAGATGGACCGCC 58.563 47.619 0.00 0.00 0.00 6.13
4649 13507 4.229876 CAAAGAAAAAGAAGATGGACCGC 58.770 43.478 0.00 0.00 0.00 5.68
4650 13508 4.278419 ACCAAAGAAAAAGAAGATGGACCG 59.722 41.667 0.00 0.00 0.00 4.79
4651 13509 5.509670 CCACCAAAGAAAAAGAAGATGGACC 60.510 44.000 0.00 0.00 0.00 4.46
4652 13510 5.532557 CCACCAAAGAAAAAGAAGATGGAC 58.467 41.667 0.00 0.00 0.00 4.02
4653 13511 4.039124 GCCACCAAAGAAAAAGAAGATGGA 59.961 41.667 0.00 0.00 0.00 3.41
4654 13512 4.039609 AGCCACCAAAGAAAAAGAAGATGG 59.960 41.667 0.00 0.00 0.00 3.51
4655 13513 4.986659 CAGCCACCAAAGAAAAAGAAGATG 59.013 41.667 0.00 0.00 0.00 2.90
4656 13514 4.502087 GCAGCCACCAAAGAAAAAGAAGAT 60.502 41.667 0.00 0.00 0.00 2.40
4657 13515 3.181476 GCAGCCACCAAAGAAAAAGAAGA 60.181 43.478 0.00 0.00 0.00 2.87
4658 13516 3.126073 GCAGCCACCAAAGAAAAAGAAG 58.874 45.455 0.00 0.00 0.00 2.85
4659 13517 2.158971 GGCAGCCACCAAAGAAAAAGAA 60.159 45.455 6.55 0.00 0.00 2.52
4660 13518 1.412343 GGCAGCCACCAAAGAAAAAGA 59.588 47.619 6.55 0.00 0.00 2.52
4661 13519 1.869342 CGGCAGCCACCAAAGAAAAAG 60.869 52.381 13.30 0.00 0.00 2.27
4662 13520 0.103937 CGGCAGCCACCAAAGAAAAA 59.896 50.000 13.30 0.00 0.00 1.94
4663 13521 1.040339 ACGGCAGCCACCAAAGAAAA 61.040 50.000 13.30 0.00 0.00 2.29
4664 13522 1.454847 ACGGCAGCCACCAAAGAAA 60.455 52.632 13.30 0.00 0.00 2.52
4665 13523 2.192861 CACGGCAGCCACCAAAGAA 61.193 57.895 13.30 0.00 0.00 2.52
4666 13524 2.594303 CACGGCAGCCACCAAAGA 60.594 61.111 13.30 0.00 0.00 2.52
4667 13525 3.673484 CCACGGCAGCCACCAAAG 61.673 66.667 13.30 0.00 0.00 2.77
4668 13526 4.514585 ACCACGGCAGCCACCAAA 62.515 61.111 13.30 0.00 0.00 3.28
4680 13538 3.041940 GTCTTCGGCACCACCACG 61.042 66.667 0.00 0.00 39.03 4.94
4688 13546 1.299850 CTGTCACGTGTCTTCGGCA 60.300 57.895 16.51 0.00 34.94 5.69
4690 13548 0.997226 CGTCTGTCACGTGTCTTCGG 60.997 60.000 16.51 9.81 44.07 4.30
4700 13558 0.529773 TTGACACCAGCGTCTGTCAC 60.530 55.000 11.49 0.00 45.05 3.67
4702 13560 1.560860 GCTTGACACCAGCGTCTGTC 61.561 60.000 6.19 4.31 37.83 3.51
4703 13561 1.595382 GCTTGACACCAGCGTCTGT 60.595 57.895 6.19 0.00 36.82 3.41
4704 13562 0.882042 AAGCTTGACACCAGCGTCTG 60.882 55.000 0.00 0.52 36.82 3.51
4705 13563 0.679505 TAAGCTTGACACCAGCGTCT 59.320 50.000 9.86 0.00 36.82 4.18
4706 13564 1.508632 TTAAGCTTGACACCAGCGTC 58.491 50.000 9.86 0.00 36.40 5.19
4707 13565 1.961793 TTTAAGCTTGACACCAGCGT 58.038 45.000 9.86 0.00 0.00 5.07
4708 13566 3.236816 CATTTTAAGCTTGACACCAGCG 58.763 45.455 9.86 0.00 0.00 5.18
4711 13569 7.446931 TGATAGAACATTTTAAGCTTGACACCA 59.553 33.333 9.86 0.00 0.00 4.17
4712 13570 7.816640 TGATAGAACATTTTAAGCTTGACACC 58.183 34.615 9.86 0.00 0.00 4.16
4713 13571 9.495754 GATGATAGAACATTTTAAGCTTGACAC 57.504 33.333 9.86 0.00 0.00 3.67
4714 13572 9.453572 AGATGATAGAACATTTTAAGCTTGACA 57.546 29.630 9.86 0.00 0.00 3.58
4734 13592 8.400947 CCGACATGATAAAACTGAAAAGATGAT 58.599 33.333 0.00 0.00 0.00 2.45
4736 13594 7.530010 ACCGACATGATAAAACTGAAAAGATG 58.470 34.615 0.00 0.00 0.00 2.90
4738 13596 6.148811 GGACCGACATGATAAAACTGAAAAGA 59.851 38.462 0.00 0.00 0.00 2.52
4739 13597 6.149474 AGGACCGACATGATAAAACTGAAAAG 59.851 38.462 0.00 0.00 0.00 2.27
4740 13598 6.001460 AGGACCGACATGATAAAACTGAAAA 58.999 36.000 0.00 0.00 0.00 2.29
4742 13600 5.160607 AGGACCGACATGATAAAACTGAA 57.839 39.130 0.00 0.00 0.00 3.02
4743 13601 4.819105 AGGACCGACATGATAAAACTGA 57.181 40.909 0.00 0.00 0.00 3.41
4744 13602 5.872617 TGTAAGGACCGACATGATAAAACTG 59.127 40.000 0.00 0.00 0.00 3.16
4745 13603 6.045072 TGTAAGGACCGACATGATAAAACT 57.955 37.500 0.00 0.00 0.00 2.66
4746 13604 6.920569 ATGTAAGGACCGACATGATAAAAC 57.079 37.500 12.72 0.00 34.98 2.43
4761 13619 5.970317 TCGAAGTACAAGTCATGTAAGGA 57.030 39.130 0.00 0.00 45.81 3.36
4763 13621 7.639162 AAGTTCGAAGTACAAGTCATGTAAG 57.361 36.000 5.80 0.00 45.81 2.34
4764 13622 7.324375 CGTAAGTTCGAAGTACAAGTCATGTAA 59.676 37.037 5.80 0.00 45.81 2.41
4765 13623 6.798476 CGTAAGTTCGAAGTACAAGTCATGTA 59.202 38.462 5.80 0.00 43.63 2.29
4766 13624 5.628193 CGTAAGTTCGAAGTACAAGTCATGT 59.372 40.000 5.80 0.00 46.36 3.21
4767 13625 5.854866 TCGTAAGTTCGAAGTACAAGTCATG 59.145 40.000 5.80 0.00 36.89 3.07
4768 13626 6.005583 TCGTAAGTTCGAAGTACAAGTCAT 57.994 37.500 5.80 0.00 36.89 3.06
4769 13627 5.422666 TCGTAAGTTCGAAGTACAAGTCA 57.577 39.130 5.80 0.00 36.89 3.41
4770 13628 9.708222 TTATATCGTAAGTTCGAAGTACAAGTC 57.292 33.333 5.80 0.00 42.99 3.01
4815 13673 3.428870 CGTCAGATCTACTGCACGTTTTT 59.571 43.478 0.00 0.00 45.38 1.94
4816 13674 2.987149 CGTCAGATCTACTGCACGTTTT 59.013 45.455 0.00 0.00 45.38 2.43
4817 13675 2.228103 TCGTCAGATCTACTGCACGTTT 59.772 45.455 0.00 0.00 45.38 3.60
4818 13676 1.810755 TCGTCAGATCTACTGCACGTT 59.189 47.619 0.00 0.00 45.38 3.99
4819 13677 1.398739 CTCGTCAGATCTACTGCACGT 59.601 52.381 0.00 0.00 45.38 4.49
4820 13678 1.268285 CCTCGTCAGATCTACTGCACG 60.268 57.143 0.00 0.00 45.38 5.34
4821 13679 1.066303 CCCTCGTCAGATCTACTGCAC 59.934 57.143 0.00 0.00 45.38 4.57
4846 14014 3.350833 ACAGCTTTGATGCTTTCCCTAG 58.649 45.455 0.00 0.00 41.98 3.02
4847 14015 3.439857 ACAGCTTTGATGCTTTCCCTA 57.560 42.857 0.00 0.00 41.98 3.53
4848 14016 2.299326 ACAGCTTTGATGCTTTCCCT 57.701 45.000 0.00 0.00 41.98 4.20
4887 14064 0.876777 TCGCGTTTTTCTTCTGCCGA 60.877 50.000 5.77 0.00 0.00 5.54
4897 14074 0.883370 GGGAGGTGAGTCGCGTTTTT 60.883 55.000 5.77 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.