Multiple sequence alignment - TraesCS1A01G264600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G264600 chr1A 100.000 6522 0 0 1 6522 460330830 460324309 0.000000e+00 12044.0
1 TraesCS1A01G264600 chr1A 94.055 942 54 2 5583 6522 504103041 504102100 0.000000e+00 1428.0
2 TraesCS1A01G264600 chr1A 93.206 942 62 2 5583 6522 565183353 565182412 0.000000e+00 1384.0
3 TraesCS1A01G264600 chr1A 89.011 273 27 3 4388 4658 27394113 27393842 1.050000e-87 335.0
4 TraesCS1A01G264600 chr1A 90.217 184 6 5 5417 5589 460291729 460291547 5.090000e-56 230.0
5 TraesCS1A01G264600 chr1B 91.398 1302 57 21 653 1945 482712699 482711444 0.000000e+00 1733.0
6 TraesCS1A01G264600 chr1B 91.711 941 77 1 5583 6522 663255991 663256931 0.000000e+00 1304.0
7 TraesCS1A01G264600 chr1B 87.712 944 110 5 5583 6522 485682871 485683812 0.000000e+00 1096.0
8 TraesCS1A01G264600 chr1B 92.060 403 25 3 4796 5198 482705755 482705360 1.590000e-155 560.0
9 TraesCS1A01G264600 chr1B 93.769 337 15 3 5251 5583 482705284 482704950 9.760000e-138 501.0
10 TraesCS1A01G264600 chr1B 88.102 353 18 9 19 357 482713247 482712905 1.320000e-106 398.0
11 TraesCS1A01G264600 chr1B 98.113 53 1 0 1348 1400 4602929 4602981 6.960000e-15 93.5
12 TraesCS1A01G264600 chr1B 92.727 55 3 1 356 409 48266465 48266411 1.950000e-10 78.7
13 TraesCS1A01G264600 chr1B 91.071 56 5 0 514 569 482712840 482712785 7.010000e-10 76.8
14 TraesCS1A01G264600 chr1D 89.034 1450 80 30 525 1952 360477369 360475977 0.000000e+00 1724.0
15 TraesCS1A01G264600 chr1D 92.731 908 40 7 4642 5541 360474115 360473226 0.000000e+00 1288.0
16 TraesCS1A01G264600 chr1D 92.131 305 12 6 1 305 360477792 360477500 2.810000e-113 420.0
17 TraesCS1A01G264600 chr1D 79.439 642 77 31 3518 4119 360474891 360474265 2.830000e-108 403.0
18 TraesCS1A01G264600 chr1D 81.441 458 38 21 2496 2907 12251264 12251720 1.360000e-86 331.0
19 TraesCS1A01G264600 chr1D 79.261 487 42 25 2288 2723 440869107 440868629 1.070000e-72 285.0
20 TraesCS1A01G264600 chr1D 78.882 483 47 13 2291 2723 355670290 355670767 6.440000e-70 276.0
21 TraesCS1A01G264600 chr1D 85.926 135 4 6 4153 4287 360474266 360474147 5.310000e-26 130.0
22 TraesCS1A01G264600 chr1D 87.850 107 13 0 416 522 364380974 364380868 6.870000e-25 126.0
23 TraesCS1A01G264600 chr1D 94.340 53 2 1 358 409 132858871 132858923 5.420000e-11 80.5
24 TraesCS1A01G264600 chr1D 95.652 46 1 1 4342 4386 360474142 360474097 9.070000e-09 73.1
25 TraesCS1A01G264600 chr3B 93.191 940 64 0 5583 6522 826387062 826386123 0.000000e+00 1382.0
26 TraesCS1A01G264600 chr3B 86.028 637 73 12 2896 3521 729718919 729719550 0.000000e+00 669.0
27 TraesCS1A01G264600 chr3B 85.938 64 8 1 356 418 512742010 512741947 4.220000e-07 67.6
28 TraesCS1A01G264600 chr2B 92.030 941 73 2 5583 6522 504302535 504303474 0.000000e+00 1321.0
29 TraesCS1A01G264600 chr2B 89.301 944 96 4 5583 6522 747512011 747511069 0.000000e+00 1179.0
30 TraesCS1A01G264600 chr2B 85.669 635 77 12 2894 3520 769969858 769969230 0.000000e+00 656.0
31 TraesCS1A01G264600 chr2B 80.159 504 54 21 2452 2910 769970304 769969802 1.050000e-87 335.0
32 TraesCS1A01G264600 chr2B 88.000 100 12 0 416 515 794665986 794665887 1.150000e-22 119.0
33 TraesCS1A01G264600 chr2B 96.364 55 1 1 356 409 729806061 729806115 9.010000e-14 89.8
34 TraesCS1A01G264600 chr6A 91.489 940 80 0 5583 6522 101520027 101519088 0.000000e+00 1293.0
35 TraesCS1A01G264600 chr6A 87.365 277 30 5 4386 4658 11574150 11574425 4.910000e-81 313.0
36 TraesCS1A01G264600 chr6A 90.055 181 15 2 2728 2907 613634295 613634473 1.410000e-56 231.0
37 TraesCS1A01G264600 chr6A 87.619 105 13 0 416 520 108948004 108948108 8.880000e-24 122.0
38 TraesCS1A01G264600 chr4B 88.453 944 104 4 5583 6522 368103558 368102616 0.000000e+00 1134.0
39 TraesCS1A01G264600 chr4B 86.486 592 67 10 2900 3482 5922099 5921512 7.130000e-179 638.0
40 TraesCS1A01G264600 chr4B 85.083 181 26 1 3340 3520 653444465 653444644 4.020000e-42 183.0
41 TraesCS1A01G264600 chr4B 88.136 59 6 1 361 418 565227149 565227091 1.170000e-07 69.4
42 TraesCS1A01G264600 chr7D 89.639 637 63 3 2886 3522 59396203 59395570 0.000000e+00 808.0
43 TraesCS1A01G264600 chr7D 89.286 420 39 4 2894 3308 436112487 436112905 7.490000e-144 521.0
44 TraesCS1A01G264600 chr7D 87.585 443 48 5 2894 3329 18137921 18138363 2.100000e-139 507.0
45 TraesCS1A01G264600 chr7D 85.282 496 38 10 2289 2752 59396824 59396332 4.570000e-131 479.0
46 TraesCS1A01G264600 chr7D 81.117 609 58 22 2353 2907 436111935 436112540 1.000000e-117 435.0
47 TraesCS1A01G264600 chr7D 82.258 310 33 6 2453 2740 18126806 18127115 1.400000e-61 248.0
48 TraesCS1A01G264600 chr7D 86.275 204 22 5 2290 2493 18126606 18126803 3.960000e-52 217.0
49 TraesCS1A01G264600 chr7D 76.923 416 54 17 2291 2669 7523139 7523549 1.430000e-46 198.0
50 TraesCS1A01G264600 chr7D 86.339 183 22 2 3324 3505 18138510 18138690 5.160000e-46 196.0
51 TraesCS1A01G264600 chr7D 87.333 150 18 1 2291 2440 418947869 418947721 3.130000e-38 171.0
52 TraesCS1A01G264600 chr5D 85.933 654 64 19 2894 3522 522049449 522050099 0.000000e+00 673.0
53 TraesCS1A01G264600 chr5D 85.449 646 79 10 2894 3532 268878075 268878712 0.000000e+00 658.0
54 TraesCS1A01G264600 chr5D 84.124 485 42 15 2290 2741 522048821 522049303 2.790000e-118 436.0
55 TraesCS1A01G264600 chr5D 83.573 487 44 7 2291 2745 268692176 268692658 2.170000e-114 424.0
56 TraesCS1A01G264600 chr5D 88.060 268 29 3 2292 2558 268693841 268694106 1.370000e-81 315.0
57 TraesCS1A01G264600 chr5D 92.268 194 15 0 2552 2745 268877741 268877934 6.440000e-70 276.0
58 TraesCS1A01G264600 chr5D 91.713 181 12 2 2728 2907 268877950 268878128 1.400000e-61 248.0
59 TraesCS1A01G264600 chr5D 89.503 181 17 2 2728 2907 522049323 522049502 1.830000e-55 228.0
60 TraesCS1A01G264600 chr5A 82.887 485 52 5 2290 2745 491229791 491230273 2.190000e-109 407.0
61 TraesCS1A01G264600 chr5A 88.278 273 30 2 4388 4658 392030990 392031262 6.310000e-85 326.0
62 TraesCS1A01G264600 chr5A 88.278 273 30 2 4388 4658 392032982 392033254 6.310000e-85 326.0
63 TraesCS1A01G264600 chr5A 90.608 181 14 2 2728 2907 491230289 491230467 3.040000e-58 237.0
64 TraesCS1A01G264600 chr7A 82.413 489 48 9 2289 2745 728012836 728013318 6.130000e-105 392.0
65 TraesCS1A01G264600 chr7A 82.725 411 30 16 2346 2720 5157296 5156891 1.750000e-85 327.0
66 TraesCS1A01G264600 chr7A 89.503 181 16 2 2728 2907 728013334 728013512 6.580000e-55 226.0
67 TraesCS1A01G264600 chr7A 84.878 205 27 3 3324 3527 728014037 728014238 3.080000e-48 204.0
68 TraesCS1A01G264600 chr7A 100.000 29 0 0 2145 2173 547753607 547753579 3.000000e-03 54.7
69 TraesCS1A01G264600 chr3A 86.761 355 43 3 2975 3329 550470537 550470887 6.130000e-105 392.0
70 TraesCS1A01G264600 chr3A 87.547 265 31 2 4396 4658 490628178 490628442 8.220000e-79 305.0
71 TraesCS1A01G264600 chr3A 89.320 103 11 0 413 515 336807016 336806914 5.310000e-26 130.0
72 TraesCS1A01G264600 chr6D 89.057 265 27 2 4396 4658 460280313 460280049 1.750000e-85 327.0
73 TraesCS1A01G264600 chr6D 88.302 265 29 2 4396 4658 120645885 120645621 3.800000e-82 316.0
74 TraesCS1A01G264600 chr6D 90.566 53 3 2 357 408 125239763 125239712 1.170000e-07 69.4
75 TraesCS1A01G264600 chr5B 88.519 270 28 3 4387 4654 697523133 697522865 2.270000e-84 324.0
76 TraesCS1A01G264600 chr5B 86.364 110 13 2 416 523 549412505 549412396 1.150000e-22 119.0
77 TraesCS1A01G264600 chr5B 90.625 64 5 1 356 418 517217093 517217030 4.190000e-12 84.2
78 TraesCS1A01G264600 chr2A 87.636 275 32 2 4386 4658 4095914 4095640 1.060000e-82 318.0
79 TraesCS1A01G264600 chr2A 79.808 416 47 10 2286 2666 102114979 102115392 1.080000e-67 268.0
80 TraesCS1A01G264600 chr2A 89.720 107 10 1 416 521 753527315 753527209 1.140000e-27 135.0
81 TraesCS1A01G264600 chr7B 79.531 469 54 18 2294 2723 576676546 576676081 4.940000e-76 296.0
82 TraesCS1A01G264600 chr7B 90.099 101 9 1 416 515 110875131 110875031 5.310000e-26 130.0
83 TraesCS1A01G264600 chr7B 89.000 100 10 1 417 515 119891128 119891227 8.880000e-24 122.0
84 TraesCS1A01G264600 chr4A 84.390 205 29 3 3324 3527 426003622 426003420 1.430000e-46 198.0
85 TraesCS1A01G264600 chr4A 92.727 55 3 1 356 409 90572047 90572101 1.950000e-10 78.7
86 TraesCS1A01G264600 chr2D 75.248 505 69 28 2290 2745 556922583 556922086 8.630000e-44 189.0
87 TraesCS1A01G264600 chr2D 91.089 101 8 1 416 515 642014016 642013916 1.140000e-27 135.0
88 TraesCS1A01G264600 chr6B 93.443 61 3 1 356 415 377555203 377555143 9.010000e-14 89.8
89 TraesCS1A01G264600 chr3D 78.788 99 21 0 5283 5381 436959959 436959861 4.220000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G264600 chr1A 460324309 460330830 6521 True 12044.000000 12044 100.000000 1 6522 1 chr1A.!!$R3 6521
1 TraesCS1A01G264600 chr1A 504102100 504103041 941 True 1428.000000 1428 94.055000 5583 6522 1 chr1A.!!$R4 939
2 TraesCS1A01G264600 chr1A 565182412 565183353 941 True 1384.000000 1384 93.206000 5583 6522 1 chr1A.!!$R5 939
3 TraesCS1A01G264600 chr1B 663255991 663256931 940 False 1304.000000 1304 91.711000 5583 6522 1 chr1B.!!$F3 939
4 TraesCS1A01G264600 chr1B 485682871 485683812 941 False 1096.000000 1096 87.712000 5583 6522 1 chr1B.!!$F2 939
5 TraesCS1A01G264600 chr1B 482711444 482713247 1803 True 735.933333 1733 90.190333 19 1945 3 chr1B.!!$R3 1926
6 TraesCS1A01G264600 chr1B 482704950 482705755 805 True 530.500000 560 92.914500 4796 5583 2 chr1B.!!$R2 787
7 TraesCS1A01G264600 chr1D 360473226 360477792 4566 True 673.016667 1724 89.152167 1 5541 6 chr1D.!!$R3 5540
8 TraesCS1A01G264600 chr3B 826386123 826387062 939 True 1382.000000 1382 93.191000 5583 6522 1 chr3B.!!$R2 939
9 TraesCS1A01G264600 chr3B 729718919 729719550 631 False 669.000000 669 86.028000 2896 3521 1 chr3B.!!$F1 625
10 TraesCS1A01G264600 chr2B 504302535 504303474 939 False 1321.000000 1321 92.030000 5583 6522 1 chr2B.!!$F1 939
11 TraesCS1A01G264600 chr2B 747511069 747512011 942 True 1179.000000 1179 89.301000 5583 6522 1 chr2B.!!$R1 939
12 TraesCS1A01G264600 chr2B 769969230 769970304 1074 True 495.500000 656 82.914000 2452 3520 2 chr2B.!!$R3 1068
13 TraesCS1A01G264600 chr6A 101519088 101520027 939 True 1293.000000 1293 91.489000 5583 6522 1 chr6A.!!$R1 939
14 TraesCS1A01G264600 chr4B 368102616 368103558 942 True 1134.000000 1134 88.453000 5583 6522 1 chr4B.!!$R2 939
15 TraesCS1A01G264600 chr4B 5921512 5922099 587 True 638.000000 638 86.486000 2900 3482 1 chr4B.!!$R1 582
16 TraesCS1A01G264600 chr7D 59395570 59396824 1254 True 643.500000 808 87.460500 2289 3522 2 chr7D.!!$R2 1233
17 TraesCS1A01G264600 chr7D 436111935 436112905 970 False 478.000000 521 85.201500 2353 3308 2 chr7D.!!$F4 955
18 TraesCS1A01G264600 chr7D 18137921 18138690 769 False 351.500000 507 86.962000 2894 3505 2 chr7D.!!$F3 611
19 TraesCS1A01G264600 chr7D 18126606 18127115 509 False 232.500000 248 84.266500 2290 2740 2 chr7D.!!$F2 450
20 TraesCS1A01G264600 chr5D 522048821 522050099 1278 False 445.666667 673 86.520000 2290 3522 3 chr5D.!!$F3 1232
21 TraesCS1A01G264600 chr5D 268877741 268878712 971 False 394.000000 658 89.810000 2552 3532 3 chr5D.!!$F2 980
22 TraesCS1A01G264600 chr5D 268692176 268694106 1930 False 369.500000 424 85.816500 2291 2745 2 chr5D.!!$F1 454
23 TraesCS1A01G264600 chr5A 392030990 392033254 2264 False 326.000000 326 88.278000 4388 4658 2 chr5A.!!$F1 270
24 TraesCS1A01G264600 chr5A 491229791 491230467 676 False 322.000000 407 86.747500 2290 2907 2 chr5A.!!$F2 617
25 TraesCS1A01G264600 chr7A 728012836 728014238 1402 False 274.000000 392 85.598000 2289 3527 3 chr7A.!!$F1 1238

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 352 0.667792 GTGAGCCACAGAGGTCGTTC 60.668 60.0 1.01 0.00 40.61 3.95 F
2209 2829 0.109532 TCCAAAGGTGTGCGAATCCA 59.890 50.0 0.00 0.00 0.00 3.41 F
2873 3855 0.035056 CCGGAGCTCATTGTTTCCCT 60.035 55.0 17.19 0.00 0.00 4.20 F
3048 4035 0.039527 GCAACACGGGGCTAGTTTTG 60.040 55.0 0.00 7.18 33.75 2.44 F
4135 5363 0.103572 AAAGATGCCGCCATTGATGC 59.896 50.0 0.00 0.00 0.00 3.91 F
4216 5444 0.039617 TTGCCGAATCCAAAGCAACG 60.040 50.0 0.00 0.00 40.13 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2213 2833 0.106719 TACTTGCATTGGGGGCTAGC 60.107 55.000 6.04 6.04 37.58 3.42 R
3420 4594 0.100682 CGTCGGATCTGACCATCGTT 59.899 55.000 25.58 0.00 35.40 3.85 R
4116 5344 0.103572 GCATCAATGGCGGCATCTTT 59.896 50.000 25.97 7.81 0.00 2.52 R
4141 5369 0.179225 CATACTGTTGCACGGCGAAC 60.179 55.000 16.62 8.64 0.00 3.95 R
5199 6744 0.727398 GAATACAGTGCCGAGGTTGC 59.273 55.000 0.00 0.00 0.00 4.17 R
6143 8108 1.070601 CATATGGCTCGATCACCACCA 59.929 52.381 4.27 0.00 39.19 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.447040 TTGCAGCTGGGTTCAAGC 58.553 55.556 17.12 0.00 0.00 4.01
49 50 3.645884 CTTGAAGGCAACATTGGTCAAG 58.354 45.455 0.00 0.00 36.93 3.02
62 63 1.021390 GGTCAAGTCATGGTGCCTCG 61.021 60.000 0.00 0.00 0.00 4.63
76 77 2.802816 GTGCCTCGATGCTTTATACCTG 59.197 50.000 13.93 0.00 0.00 4.00
77 78 2.224281 TGCCTCGATGCTTTATACCTGG 60.224 50.000 13.93 0.00 0.00 4.45
78 79 2.872038 GCCTCGATGCTTTATACCTGGG 60.872 54.545 5.34 0.00 0.00 4.45
79 80 2.632996 CCTCGATGCTTTATACCTGGGA 59.367 50.000 0.00 0.00 0.00 4.37
80 81 3.071023 CCTCGATGCTTTATACCTGGGAA 59.929 47.826 0.00 0.00 0.00 3.97
160 161 1.165270 CTGGGAAGGTAAAACGGCTG 58.835 55.000 0.00 0.00 0.00 4.85
193 194 7.012894 CCTTGTAATTGTTGAGACTTTGGTACA 59.987 37.037 0.00 0.00 0.00 2.90
194 195 7.490962 TGTAATTGTTGAGACTTTGGTACAG 57.509 36.000 0.00 0.00 42.39 2.74
195 196 7.276658 TGTAATTGTTGAGACTTTGGTACAGA 58.723 34.615 0.00 0.00 42.39 3.41
216 217 2.711542 AGAAGTTTGGGGCTTACATCG 58.288 47.619 0.00 0.00 0.00 3.84
221 222 3.083293 GTTTGGGGCTTACATCGGTTAA 58.917 45.455 0.00 0.00 0.00 2.01
272 273 0.712380 AGAATGGCCAAGGACCCAAT 59.288 50.000 10.96 0.00 34.25 3.16
285 286 6.463614 CCAAGGACCCAATTTTTGAACATACA 60.464 38.462 0.00 0.00 0.00 2.29
291 292 8.389779 ACCCAATTTTTGAACATACATTTTCC 57.610 30.769 0.00 0.00 0.00 3.13
299 300 9.541143 TTTTGAACATACATTTTCCTTCTTTCC 57.459 29.630 0.00 0.00 0.00 3.13
300 301 7.831691 TGAACATACATTTTCCTTCTTTCCA 57.168 32.000 0.00 0.00 0.00 3.53
338 352 0.667792 GTGAGCCACAGAGGTCGTTC 60.668 60.000 1.01 0.00 40.61 3.95
347 361 2.296073 AGAGGTCGTTCTCTGGAACT 57.704 50.000 8.92 0.00 46.84 3.01
357 371 3.895232 TCTCTGGAACTGCTGTATTCC 57.105 47.619 7.36 7.36 44.08 3.01
358 372 2.166459 TCTCTGGAACTGCTGTATTCCG 59.834 50.000 9.21 5.45 46.35 4.30
359 373 2.166459 CTCTGGAACTGCTGTATTCCGA 59.834 50.000 9.21 8.49 46.35 4.55
360 374 2.565391 TCTGGAACTGCTGTATTCCGAA 59.435 45.455 9.21 0.00 46.35 4.30
362 376 3.941483 CTGGAACTGCTGTATTCCGAAAT 59.059 43.478 9.21 0.00 46.35 2.17
363 377 4.331968 TGGAACTGCTGTATTCCGAAATT 58.668 39.130 9.21 0.00 46.35 1.82
364 378 5.492895 TGGAACTGCTGTATTCCGAAATTA 58.507 37.500 9.21 0.00 46.35 1.40
365 379 5.353123 TGGAACTGCTGTATTCCGAAATTAC 59.647 40.000 9.21 0.00 46.35 1.89
366 380 5.585047 GGAACTGCTGTATTCCGAAATTACT 59.415 40.000 0.00 0.00 35.34 2.24
367 381 6.093633 GGAACTGCTGTATTCCGAAATTACTT 59.906 38.462 0.00 0.00 35.34 2.24
370 384 6.092259 ACTGCTGTATTCCGAAATTACTTGTC 59.908 38.462 0.00 0.00 0.00 3.18
372 386 5.459110 TGTATTCCGAAATTACTTGTCGC 57.541 39.130 0.00 0.00 33.46 5.19
373 387 4.930405 TGTATTCCGAAATTACTTGTCGCA 59.070 37.500 0.00 0.00 33.46 5.10
374 388 4.600012 ATTCCGAAATTACTTGTCGCAG 57.400 40.909 0.00 0.00 33.46 5.18
375 389 3.306917 TCCGAAATTACTTGTCGCAGA 57.693 42.857 0.00 0.00 33.46 4.26
376 390 3.655486 TCCGAAATTACTTGTCGCAGAA 58.345 40.909 0.00 0.00 39.69 3.02
377 391 4.059511 TCCGAAATTACTTGTCGCAGAAA 58.940 39.130 0.00 0.00 39.69 2.52
378 392 4.693566 TCCGAAATTACTTGTCGCAGAAAT 59.306 37.500 0.00 0.00 39.69 2.17
379 393 4.788100 CCGAAATTACTTGTCGCAGAAATG 59.212 41.667 0.00 0.00 39.69 2.32
382 396 6.515272 AAATTACTTGTCGCAGAAATGGAT 57.485 33.333 0.00 0.00 39.69 3.41
384 398 7.624360 AATTACTTGTCGCAGAAATGGATAA 57.376 32.000 0.00 0.00 39.69 1.75
386 400 5.957842 ACTTGTCGCAGAAATGGATAAAA 57.042 34.783 0.00 0.00 39.69 1.52
387 401 6.515272 ACTTGTCGCAGAAATGGATAAAAT 57.485 33.333 0.00 0.00 39.69 1.82
388 402 6.324819 ACTTGTCGCAGAAATGGATAAAATG 58.675 36.000 0.00 0.00 39.69 2.32
389 403 6.150976 ACTTGTCGCAGAAATGGATAAAATGA 59.849 34.615 0.00 0.00 39.69 2.57
390 404 6.507958 TGTCGCAGAAATGGATAAAATGAA 57.492 33.333 0.00 0.00 39.69 2.57
391 405 7.099266 TGTCGCAGAAATGGATAAAATGAAT 57.901 32.000 0.00 0.00 39.69 2.57
392 406 6.974048 TGTCGCAGAAATGGATAAAATGAATG 59.026 34.615 0.00 0.00 39.69 2.67
393 407 6.974622 GTCGCAGAAATGGATAAAATGAATGT 59.025 34.615 0.00 0.00 39.69 2.71
394 408 8.128582 GTCGCAGAAATGGATAAAATGAATGTA 58.871 33.333 0.00 0.00 39.69 2.29
395 409 8.849168 TCGCAGAAATGGATAAAATGAATGTAT 58.151 29.630 0.00 0.00 0.00 2.29
403 417 9.784531 ATGGATAAAATGAATGTATCTCGAACT 57.215 29.630 0.00 0.00 0.00 3.01
416 430 8.648557 TGTATCTCGAACTAAAATTCATCTGG 57.351 34.615 0.00 0.00 0.00 3.86
417 431 8.474831 TGTATCTCGAACTAAAATTCATCTGGA 58.525 33.333 0.00 0.00 0.00 3.86
418 432 9.314321 GTATCTCGAACTAAAATTCATCTGGAA 57.686 33.333 0.00 0.00 40.46 3.53
430 444 6.698008 ATTCATCTGGAATTATTTGTCGCA 57.302 33.333 0.00 0.00 43.76 5.10
431 445 5.739752 TCATCTGGAATTATTTGTCGCAG 57.260 39.130 0.00 0.00 0.00 5.18
432 446 5.427378 TCATCTGGAATTATTTGTCGCAGA 58.573 37.500 0.00 0.00 0.00 4.26
433 447 5.879777 TCATCTGGAATTATTTGTCGCAGAA 59.120 36.000 0.00 0.00 39.69 3.02
434 448 6.374053 TCATCTGGAATTATTTGTCGCAGAAA 59.626 34.615 0.00 0.00 39.69 2.52
435 449 6.757897 TCTGGAATTATTTGTCGCAGAAAT 57.242 33.333 0.00 0.00 39.69 2.17
436 450 6.554419 TCTGGAATTATTTGTCGCAGAAATG 58.446 36.000 0.00 0.00 39.69 2.32
437 451 5.649557 TGGAATTATTTGTCGCAGAAATGG 58.350 37.500 0.00 0.00 39.69 3.16
438 452 5.417266 TGGAATTATTTGTCGCAGAAATGGA 59.583 36.000 0.00 0.00 39.69 3.41
439 453 6.096705 TGGAATTATTTGTCGCAGAAATGGAT 59.903 34.615 0.00 0.00 39.69 3.41
440 454 7.284261 TGGAATTATTTGTCGCAGAAATGGATA 59.716 33.333 0.00 0.00 39.69 2.59
441 455 8.134895 GGAATTATTTGTCGCAGAAATGGATAA 58.865 33.333 0.00 0.00 39.69 1.75
442 456 9.515020 GAATTATTTGTCGCAGAAATGGATAAA 57.485 29.630 0.00 0.00 39.69 1.40
443 457 9.868277 AATTATTTGTCGCAGAAATGGATAAAA 57.132 25.926 0.00 0.00 39.69 1.52
445 459 7.760131 ATTTGTCGCAGAAATGGATAAAATG 57.240 32.000 0.00 0.00 39.69 2.32
446 460 5.247507 TGTCGCAGAAATGGATAAAATGG 57.752 39.130 0.00 0.00 39.69 3.16
447 461 4.946772 TGTCGCAGAAATGGATAAAATGGA 59.053 37.500 0.00 0.00 39.69 3.41
448 462 5.593909 TGTCGCAGAAATGGATAAAATGGAT 59.406 36.000 0.00 0.00 39.69 3.41
449 463 5.916883 GTCGCAGAAATGGATAAAATGGATG 59.083 40.000 0.00 0.00 39.69 3.51
450 464 5.593909 TCGCAGAAATGGATAAAATGGATGT 59.406 36.000 0.00 0.00 0.00 3.06
451 465 6.770303 TCGCAGAAATGGATAAAATGGATGTA 59.230 34.615 0.00 0.00 0.00 2.29
452 466 7.448161 TCGCAGAAATGGATAAAATGGATGTAT 59.552 33.333 0.00 0.00 0.00 2.29
453 467 7.752239 CGCAGAAATGGATAAAATGGATGTATC 59.248 37.037 0.00 0.00 0.00 2.24
454 468 8.800332 GCAGAAATGGATAAAATGGATGTATCT 58.200 33.333 0.00 0.00 0.00 1.98
502 516 6.494893 TCCATTTCTCCAACAAGTATTTCG 57.505 37.500 0.00 0.00 0.00 3.46
503 517 5.414454 TCCATTTCTCCAACAAGTATTTCGG 59.586 40.000 0.00 0.00 0.00 4.30
504 518 5.393027 CCATTTCTCCAACAAGTATTTCGGG 60.393 44.000 0.00 0.00 0.00 5.14
505 519 4.627284 TTCTCCAACAAGTATTTCGGGA 57.373 40.909 0.00 0.00 0.00 5.14
506 520 3.934068 TCTCCAACAAGTATTTCGGGAC 58.066 45.455 0.00 0.00 0.00 4.46
507 521 3.581332 TCTCCAACAAGTATTTCGGGACT 59.419 43.478 0.00 0.00 0.00 3.85
508 522 3.670625 TCCAACAAGTATTTCGGGACTG 58.329 45.455 0.00 0.00 0.00 3.51
510 524 3.684788 CCAACAAGTATTTCGGGACTGAG 59.315 47.826 0.00 0.00 0.00 3.35
512 526 2.236395 ACAAGTATTTCGGGACTGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
522 536 2.609747 GGGACTGAGGGAGCACATATA 58.390 52.381 0.00 0.00 0.00 0.86
523 537 2.972713 GGGACTGAGGGAGCACATATAA 59.027 50.000 0.00 0.00 0.00 0.98
532 546 5.216622 AGGGAGCACATATAACTAGAACCA 58.783 41.667 0.00 0.00 0.00 3.67
534 548 5.934625 GGGAGCACATATAACTAGAACCATG 59.065 44.000 0.00 0.00 0.00 3.66
576 615 5.135383 TCCAAATGGGATTGCTAGATCTTG 58.865 41.667 0.00 0.00 42.15 3.02
577 616 5.103982 TCCAAATGGGATTGCTAGATCTTGA 60.104 40.000 8.45 0.00 42.15 3.02
580 619 2.766263 TGGGATTGCTAGATCTTGACGT 59.234 45.455 8.45 0.00 0.00 4.34
584 623 4.745620 GGATTGCTAGATCTTGACGTAACC 59.254 45.833 8.45 0.22 0.00 2.85
590 629 6.041637 TGCTAGATCTTGACGTAACCCATAAT 59.958 38.462 8.45 0.00 0.00 1.28
598 637 8.047911 TCTTGACGTAACCCATAATAATTCCAA 58.952 33.333 0.00 0.00 0.00 3.53
603 642 7.283807 ACGTAACCCATAATAATTCCAAAGGAC 59.716 37.037 0.00 0.00 0.00 3.85
637 676 3.265791 CATGCTCAGAACTTGACCTACC 58.734 50.000 0.00 0.00 0.00 3.18
638 677 1.272490 TGCTCAGAACTTGACCTACCG 59.728 52.381 0.00 0.00 0.00 4.02
639 678 1.404315 GCTCAGAACTTGACCTACCGG 60.404 57.143 0.00 0.00 0.00 5.28
646 685 2.798148 CTTGACCTACCGGCGGCTTT 62.798 60.000 28.71 9.71 0.00 3.51
666 705 4.525411 TTTCTTTTCGTTCTCGTCAACC 57.475 40.909 0.00 0.00 38.33 3.77
713 753 3.223157 CGCACCTTGACGTTAAACAATC 58.777 45.455 0.00 0.00 0.00 2.67
719 759 7.292292 CACCTTGACGTTAAACAATCGATTAA 58.708 34.615 10.97 0.00 0.00 1.40
723 763 9.199184 CTTGACGTTAAACAATCGATTAATCTG 57.801 33.333 10.97 7.62 0.00 2.90
725 765 6.483687 ACGTTAAACAATCGATTAATCTGGC 58.516 36.000 10.97 0.00 0.00 4.85
732 772 6.866480 ACAATCGATTAATCTGGCACATTTT 58.134 32.000 10.97 0.00 38.20 1.82
733 773 6.753279 ACAATCGATTAATCTGGCACATTTTG 59.247 34.615 10.97 0.00 38.20 2.44
744 784 6.862209 TCTGGCACATTTTGTAATCCATTAC 58.138 36.000 2.92 2.92 39.74 1.89
758 798 7.355778 GTAATCCATTACAAAGCAGTAGATGC 58.644 38.462 4.82 0.00 46.53 3.91
803 857 2.309528 TGGCGACAATGTCCATACTC 57.690 50.000 7.91 0.00 37.44 2.59
804 858 1.134521 TGGCGACAATGTCCATACTCC 60.135 52.381 7.91 0.97 37.44 3.85
806 860 2.485479 GGCGACAATGTCCATACTCCAT 60.485 50.000 7.91 0.00 0.00 3.41
807 861 3.206150 GCGACAATGTCCATACTCCATT 58.794 45.455 7.91 0.00 0.00 3.16
821 877 2.703007 ACTCCATTGTCTATCCTCTGCC 59.297 50.000 0.00 0.00 0.00 4.85
839 895 1.809547 GCCAGAGCTCCAAAAGAAGAC 59.190 52.381 10.93 0.00 35.50 3.01
857 913 6.299141 AGAAGACGCATATACAAATGGGATT 58.701 36.000 7.76 2.91 41.09 3.01
858 914 6.428159 AGAAGACGCATATACAAATGGGATTC 59.572 38.462 7.76 10.13 41.09 2.52
859 915 5.003804 AGACGCATATACAAATGGGATTCC 58.996 41.667 7.76 0.00 41.09 3.01
886 942 1.348036 AGGTCACTGCAAACCTAGGAC 59.652 52.381 17.98 0.00 44.12 3.85
887 943 1.348036 GGTCACTGCAAACCTAGGACT 59.652 52.381 17.98 0.00 32.54 3.85
888 944 2.565834 GGTCACTGCAAACCTAGGACTA 59.434 50.000 17.98 0.00 32.54 2.59
889 945 3.368531 GGTCACTGCAAACCTAGGACTAG 60.369 52.174 17.98 8.57 32.54 2.57
960 1016 2.760159 CCGCCACCGCCATTAACAG 61.760 63.158 0.00 0.00 0.00 3.16
973 1029 3.937706 CCATTAACAGTCAGCTTCCAGAG 59.062 47.826 0.00 0.00 0.00 3.35
1584 1640 3.432051 GATCTGCCGGGTGGTCTCG 62.432 68.421 2.18 0.00 37.67 4.04
1611 1667 1.101049 GGCTGTCGAGAGAGGAGGAG 61.101 65.000 14.74 0.00 43.49 3.69
1612 1668 1.101049 GCTGTCGAGAGAGGAGGAGG 61.101 65.000 14.74 0.00 43.49 4.30
1613 1669 0.465460 CTGTCGAGAGAGGAGGAGGG 60.465 65.000 2.83 0.00 43.49 4.30
1785 1842 2.922503 TGGGACGAGCTGCTGGAA 60.923 61.111 18.76 0.00 0.00 3.53
1801 1858 2.884639 CTGGAAAAGGTGGTCGTTGAAT 59.115 45.455 0.00 0.00 0.00 2.57
1932 1995 2.890808 GGGACATCATCAAGTCGCTA 57.109 50.000 0.00 0.00 42.40 4.26
1952 2015 4.632688 GCTATTGGCGGTAAGTTGTTCTTA 59.367 41.667 0.00 0.00 37.56 2.10
1954 2017 5.813080 ATTGGCGGTAAGTTGTTCTTATC 57.187 39.130 0.00 0.00 40.23 1.75
1955 2018 4.274602 TGGCGGTAAGTTGTTCTTATCA 57.725 40.909 0.00 0.00 39.10 2.15
1973 2405 0.529833 CAGAGTCGACTGCACCTCAT 59.470 55.000 25.58 0.00 0.00 2.90
1974 2406 1.745653 CAGAGTCGACTGCACCTCATA 59.254 52.381 25.58 0.00 0.00 2.15
2001 2433 1.202222 GCAAGGGACATTGCGAATCTG 60.202 52.381 5.92 0.00 45.43 2.90
2012 2444 1.361668 GCGAATCTGAGCGCCAAAGA 61.362 55.000 2.29 5.09 46.93 2.52
2034 2474 2.027653 TCAGAACATCCGCACACCAATA 60.028 45.455 0.00 0.00 0.00 1.90
2050 2490 7.418025 GCACACCAATATACTCTCTAGTTTCCT 60.418 40.741 0.00 0.00 37.15 3.36
2051 2491 8.478877 CACACCAATATACTCTCTAGTTTCCTT 58.521 37.037 0.00 0.00 37.15 3.36
2052 2492 8.697292 ACACCAATATACTCTCTAGTTTCCTTC 58.303 37.037 0.00 0.00 37.15 3.46
2053 2493 8.145122 CACCAATATACTCTCTAGTTTCCTTCC 58.855 40.741 0.00 0.00 37.15 3.46
2054 2494 7.290481 ACCAATATACTCTCTAGTTTCCTTCCC 59.710 40.741 0.00 0.00 37.15 3.97
2055 2495 7.511028 CCAATATACTCTCTAGTTTCCTTCCCT 59.489 40.741 0.00 0.00 37.15 4.20
2056 2496 8.581578 CAATATACTCTCTAGTTTCCTTCCCTC 58.418 40.741 0.00 0.00 37.15 4.30
2058 2498 4.753186 ACTCTCTAGTTTCCTTCCCTCAA 58.247 43.478 0.00 0.00 29.00 3.02
2059 2499 5.155905 ACTCTCTAGTTTCCTTCCCTCAAA 58.844 41.667 0.00 0.00 29.00 2.69
2060 2500 5.607171 ACTCTCTAGTTTCCTTCCCTCAAAA 59.393 40.000 0.00 0.00 29.00 2.44
2090 2530 6.884280 AAAAACCTCTCTAGTTTCCATGTG 57.116 37.500 0.00 0.00 36.44 3.21
2091 2531 3.618690 ACCTCTCTAGTTTCCATGTGC 57.381 47.619 0.00 0.00 0.00 4.57
2092 2532 2.906389 ACCTCTCTAGTTTCCATGTGCA 59.094 45.455 0.00 0.00 0.00 4.57
2093 2533 3.327757 ACCTCTCTAGTTTCCATGTGCAA 59.672 43.478 0.00 0.00 0.00 4.08
2094 2534 4.018960 ACCTCTCTAGTTTCCATGTGCAAT 60.019 41.667 0.00 0.00 0.00 3.56
2095 2535 4.334759 CCTCTCTAGTTTCCATGTGCAATG 59.665 45.833 0.00 0.00 0.00 2.82
2096 2536 5.164620 TCTCTAGTTTCCATGTGCAATGA 57.835 39.130 9.56 0.00 0.00 2.57
2097 2537 5.559770 TCTCTAGTTTCCATGTGCAATGAA 58.440 37.500 9.56 0.00 0.00 2.57
2098 2538 6.003326 TCTCTAGTTTCCATGTGCAATGAAA 58.997 36.000 9.56 4.38 0.00 2.69
2099 2539 6.660521 TCTCTAGTTTCCATGTGCAATGAAAT 59.339 34.615 9.56 1.58 0.00 2.17
2100 2540 7.177216 TCTCTAGTTTCCATGTGCAATGAAATT 59.823 33.333 9.56 6.24 36.63 1.82
2101 2541 7.669427 TCTAGTTTCCATGTGCAATGAAATTT 58.331 30.769 9.56 0.00 31.22 1.82
2102 2542 8.149647 TCTAGTTTCCATGTGCAATGAAATTTT 58.850 29.630 9.56 0.00 31.22 1.82
2122 2562 7.601705 ATTTTCTTTTTCATCCCTGAAGACA 57.398 32.000 0.00 0.00 42.19 3.41
2123 2563 6.639632 TTTCTTTTTCATCCCTGAAGACAG 57.360 37.500 0.00 0.00 42.19 3.51
2128 2568 1.229951 ATCCCTGAAGACAGCCCCA 60.230 57.895 0.00 0.00 42.25 4.96
2130 2570 2.227036 CCCTGAAGACAGCCCCAGT 61.227 63.158 0.00 0.00 42.25 4.00
2135 2575 0.173708 GAAGACAGCCCCAGTCGTAG 59.826 60.000 0.00 0.00 40.84 3.51
2166 2606 5.459107 GCAAGTCATGATCAAAAGATGCATC 59.541 40.000 19.37 19.37 0.00 3.91
2200 2820 6.610075 AAGCATCATAAAATCCAAAGGTGT 57.390 33.333 0.00 0.00 0.00 4.16
2205 2825 4.520874 TCATAAAATCCAAAGGTGTGCGAA 59.479 37.500 0.00 0.00 0.00 4.70
2209 2829 0.109532 TCCAAAGGTGTGCGAATCCA 59.890 50.000 0.00 0.00 0.00 3.41
2213 2833 3.124921 GGTGTGCGAATCCACCCG 61.125 66.667 0.00 0.00 44.37 5.28
2218 2838 2.967615 GCGAATCCACCCGCTAGC 60.968 66.667 4.06 4.06 46.96 3.42
2219 2839 2.280186 CGAATCCACCCGCTAGCC 60.280 66.667 9.66 0.00 0.00 3.93
2220 2840 2.111251 GAATCCACCCGCTAGCCC 59.889 66.667 9.66 0.00 0.00 5.19
2221 2841 3.477578 GAATCCACCCGCTAGCCCC 62.478 68.421 9.66 0.00 0.00 5.80
2225 2845 3.809013 CACCCGCTAGCCCCCAAT 61.809 66.667 9.66 0.00 0.00 3.16
2226 2846 3.809013 ACCCGCTAGCCCCCAATG 61.809 66.667 9.66 0.00 0.00 2.82
2228 2848 4.504596 CCGCTAGCCCCCAATGCA 62.505 66.667 9.66 0.00 0.00 3.96
2229 2849 2.440065 CGCTAGCCCCCAATGCAA 60.440 61.111 9.66 0.00 0.00 4.08
2230 2850 2.484062 CGCTAGCCCCCAATGCAAG 61.484 63.158 9.66 0.00 0.00 4.01
2231 2851 1.380380 GCTAGCCCCCAATGCAAGT 60.380 57.895 2.29 0.00 0.00 3.16
2232 2852 0.106719 GCTAGCCCCCAATGCAAGTA 60.107 55.000 2.29 0.00 0.00 2.24
2233 2853 1.479389 GCTAGCCCCCAATGCAAGTAT 60.479 52.381 2.29 0.00 0.00 2.12
2234 2854 2.949447 CTAGCCCCCAATGCAAGTATT 58.051 47.619 0.00 0.00 0.00 1.89
2235 2855 2.252535 AGCCCCCAATGCAAGTATTT 57.747 45.000 0.00 0.00 0.00 1.40
2236 2856 1.832998 AGCCCCCAATGCAAGTATTTG 59.167 47.619 0.00 0.00 37.36 2.32
2237 2857 1.134431 GCCCCCAATGCAAGTATTTGG 60.134 52.381 8.76 8.76 34.79 3.28
2257 3118 5.705609 TGGAGAGGAAGCAAAAACATAAC 57.294 39.130 0.00 0.00 0.00 1.89
2263 3124 4.156008 AGGAAGCAAAAACATAACTAGCCG 59.844 41.667 0.00 0.00 0.00 5.52
2283 3144 2.295885 GTGAGAGCAAGAATCCCCATG 58.704 52.381 0.00 0.00 0.00 3.66
2284 3145 2.092753 GTGAGAGCAAGAATCCCCATGA 60.093 50.000 0.00 0.00 0.00 3.07
2285 3146 2.577563 TGAGAGCAAGAATCCCCATGAA 59.422 45.455 0.00 0.00 0.00 2.57
2286 3147 3.010472 TGAGAGCAAGAATCCCCATGAAA 59.990 43.478 0.00 0.00 0.00 2.69
2287 3148 4.019174 GAGAGCAAGAATCCCCATGAAAA 58.981 43.478 0.00 0.00 0.00 2.29
2303 3164 6.229733 CCATGAAAATTGGGAAAAGCTTACA 58.770 36.000 0.00 0.00 0.00 2.41
2348 3209 2.920912 TCCGCCGTTTCCCTGTCT 60.921 61.111 0.00 0.00 0.00 3.41
2357 3218 2.549992 CGTTTCCCTGTCTGTTGGATCA 60.550 50.000 0.00 0.00 0.00 2.92
2415 3276 1.948138 TCACGCGCGTCGGTTTTTA 60.948 52.632 35.61 8.66 43.86 1.52
2425 3287 4.529446 GCGTCGGTTTTTATGAAACAGAA 58.471 39.130 9.63 0.00 36.43 3.02
2458 3362 4.216902 CAGAACCATCATTCTTGCAACTGA 59.783 41.667 0.00 0.00 36.78 3.41
2466 3370 0.469494 TCTTGCAACTGACAGCTCCA 59.531 50.000 1.25 0.00 0.00 3.86
2592 3528 3.833650 CAGCAGGTATGGATCTGAGATCT 59.166 47.826 20.73 5.97 33.11 2.75
2604 3548 2.046292 CTGAGATCTCCCCTCCCTTTC 58.954 57.143 20.03 0.00 0.00 2.62
2619 3564 1.064685 CCTTTCCCCCGCATTTCTAGT 60.065 52.381 0.00 0.00 0.00 2.57
2638 3583 7.482169 TCTAGTGATTCTGTAGGTGTTCATT 57.518 36.000 0.00 0.00 0.00 2.57
2775 3756 5.337813 GGATTTGGATCTGTTGCAGGATTTT 60.338 40.000 0.00 0.00 32.66 1.82
2776 3757 5.549742 TTTGGATCTGTTGCAGGATTTTT 57.450 34.783 0.00 0.00 31.51 1.94
2847 3829 7.655490 AGCTGCATGATCTTTGTATTATTTCC 58.345 34.615 1.02 0.00 0.00 3.13
2856 3838 9.382244 GATCTTTGTATTATTTCCGAATTTCCG 57.618 33.333 0.00 0.00 0.00 4.30
2866 3848 2.744787 CGAATTTCCGGAGCTCATTG 57.255 50.000 17.19 4.40 0.00 2.82
2867 3849 2.009774 CGAATTTCCGGAGCTCATTGT 58.990 47.619 17.19 0.00 0.00 2.71
2868 3850 2.420022 CGAATTTCCGGAGCTCATTGTT 59.580 45.455 17.19 2.08 0.00 2.83
2869 3851 3.119849 CGAATTTCCGGAGCTCATTGTTT 60.120 43.478 17.19 1.38 0.00 2.83
2870 3852 4.415735 GAATTTCCGGAGCTCATTGTTTC 58.584 43.478 17.19 7.34 0.00 2.78
2871 3853 1.821216 TTCCGGAGCTCATTGTTTCC 58.179 50.000 17.19 0.00 0.00 3.13
2872 3854 0.035439 TCCGGAGCTCATTGTTTCCC 60.035 55.000 17.19 0.00 0.00 3.97
2873 3855 0.035056 CCGGAGCTCATTGTTTCCCT 60.035 55.000 17.19 0.00 0.00 4.20
2874 3856 1.209504 CCGGAGCTCATTGTTTCCCTA 59.790 52.381 17.19 0.00 0.00 3.53
2875 3857 2.555199 CGGAGCTCATTGTTTCCCTAG 58.445 52.381 17.19 0.00 0.00 3.02
2876 3858 2.743183 CGGAGCTCATTGTTTCCCTAGG 60.743 54.545 17.19 0.06 0.00 3.02
2877 3859 2.505819 GGAGCTCATTGTTTCCCTAGGA 59.494 50.000 17.19 0.00 0.00 2.94
2878 3860 3.137360 GGAGCTCATTGTTTCCCTAGGAT 59.863 47.826 17.19 0.00 0.00 3.24
2879 3861 4.385754 GGAGCTCATTGTTTCCCTAGGATT 60.386 45.833 17.19 0.00 0.00 3.01
2880 3862 4.786425 AGCTCATTGTTTCCCTAGGATTC 58.214 43.478 11.48 0.00 0.00 2.52
2881 3863 4.476479 AGCTCATTGTTTCCCTAGGATTCT 59.524 41.667 11.48 0.00 0.00 2.40
2882 3864 4.819088 GCTCATTGTTTCCCTAGGATTCTC 59.181 45.833 11.48 0.00 0.00 2.87
2883 3865 5.397334 GCTCATTGTTTCCCTAGGATTCTCT 60.397 44.000 11.48 0.00 0.00 3.10
2884 3866 6.183361 GCTCATTGTTTCCCTAGGATTCTCTA 60.183 42.308 11.48 0.00 0.00 2.43
2885 3867 7.474079 GCTCATTGTTTCCCTAGGATTCTCTAT 60.474 40.741 11.48 0.00 0.00 1.98
2886 3868 7.739825 TCATTGTTTCCCTAGGATTCTCTATG 58.260 38.462 11.48 9.11 0.00 2.23
2887 3869 7.568738 TCATTGTTTCCCTAGGATTCTCTATGA 59.431 37.037 11.48 11.04 0.00 2.15
2888 3870 7.937700 TTGTTTCCCTAGGATTCTCTATGAT 57.062 36.000 11.48 0.00 0.00 2.45
2889 3871 7.937700 TGTTTCCCTAGGATTCTCTATGATT 57.062 36.000 11.48 0.00 0.00 2.57
2890 3872 8.337118 TGTTTCCCTAGGATTCTCTATGATTT 57.663 34.615 11.48 0.00 0.00 2.17
2891 3873 8.781951 TGTTTCCCTAGGATTCTCTATGATTTT 58.218 33.333 11.48 0.00 0.00 1.82
2892 3874 9.278978 GTTTCCCTAGGATTCTCTATGATTTTC 57.721 37.037 11.48 0.00 0.00 2.29
2911 3893 8.099537 TGATTTTCTCTGAAGCTCATAGTTTCT 58.900 33.333 5.33 0.00 36.55 2.52
2973 3956 9.994432 CTTATGATAAACTTAAAGTTGCAGGAG 57.006 33.333 0.00 0.00 38.66 3.69
3006 3989 5.525012 GCCAGTCTTTTTCTTTTTCTTGCAT 59.475 36.000 0.00 0.00 0.00 3.96
3047 4034 0.466555 TGCAACACGGGGCTAGTTTT 60.467 50.000 0.00 0.00 0.00 2.43
3048 4035 0.039527 GCAACACGGGGCTAGTTTTG 60.040 55.000 0.00 7.18 33.75 2.44
3164 4158 6.972328 CAGAAAGAAAAGAAATGTTTCGGTCA 59.028 34.615 0.24 0.00 41.92 4.02
3197 4200 4.911514 TTTTCTGTAACAAGGGTCTTGC 57.088 40.909 7.48 0.00 0.00 4.01
3213 4216 4.508662 GTCTTGCTTCAGTAACATAGCCT 58.491 43.478 0.00 0.00 32.73 4.58
3222 4225 4.002982 CAGTAACATAGCCTGAGTTGCAA 58.997 43.478 0.00 0.00 31.52 4.08
3228 4231 2.972505 CCTGAGTTGCAACGCCGT 60.973 61.111 27.22 9.76 0.00 5.68
3250 4264 2.180017 GCGCCCGACGTTAGAGAA 59.820 61.111 0.00 0.00 46.11 2.87
3251 4265 1.872679 GCGCCCGACGTTAGAGAAG 60.873 63.158 0.00 0.00 46.11 2.85
3279 4294 2.034432 TCAAACATTGCAACATGACGCT 59.966 40.909 0.00 0.00 0.00 5.07
3420 4594 1.174078 TAAGAGGTGGTCACGCGTGA 61.174 55.000 36.40 36.40 37.24 4.35
3463 4637 3.449227 AGGGCGCTGATCGAACGA 61.449 61.111 7.64 0.00 41.67 3.85
3467 4641 2.444624 GCGCTGATCGAACGAAGCA 61.445 57.895 16.99 10.68 41.67 3.91
3470 4644 1.071605 GCTGATCGAACGAAGCACTT 58.928 50.000 13.56 0.00 35.69 3.16
3505 4679 1.070786 AATACATTCGCCGGCCGAT 59.929 52.632 30.73 12.47 46.81 4.18
3542 4716 5.813672 CCATGAAAATTTGGGTAGCATCTTG 59.186 40.000 0.00 0.00 0.00 3.02
3550 4724 5.441718 TTGGGTAGCATCTTGAATCTTCT 57.558 39.130 0.00 0.00 0.00 2.85
3556 4730 4.779696 AGCATCTTGAATCTTCTCCTTCC 58.220 43.478 0.00 0.00 0.00 3.46
3564 4738 0.984230 TCTTCTCCTTCCGCACCATT 59.016 50.000 0.00 0.00 0.00 3.16
3592 4767 8.744652 TCCCACCACAAATACAAAATAGTAATG 58.255 33.333 0.00 0.00 0.00 1.90
3615 4790 5.526111 TGACGATCATCTCACACGTATTCTA 59.474 40.000 0.00 0.00 37.32 2.10
3641 4826 2.419297 CCCATGGTAGTCTTGCTCTCAC 60.419 54.545 11.73 0.00 0.00 3.51
3678 4863 6.743575 ATTCCATAACAGTTTCACTAGCAC 57.256 37.500 0.00 0.00 0.00 4.40
3685 4870 4.569943 ACAGTTTCACTAGCACGATCAAT 58.430 39.130 0.00 0.00 0.00 2.57
3713 4898 7.558807 TCACAAGCTCCATCAATAATTTCATCT 59.441 33.333 0.00 0.00 0.00 2.90
3725 4910 9.734620 TCAATAATTTCATCTAATTTGCCTTCG 57.265 29.630 0.00 0.00 0.00 3.79
3727 4912 4.370364 TTTCATCTAATTTGCCTTCGCC 57.630 40.909 0.00 0.00 0.00 5.54
3770 4955 6.708949 AGATGTAAGTTTCTTTCCGCACTTTA 59.291 34.615 0.00 0.00 31.83 1.85
3772 4957 5.585445 TGTAAGTTTCTTTCCGCACTTTACA 59.415 36.000 0.00 0.00 31.83 2.41
3773 4958 5.767816 AAGTTTCTTTCCGCACTTTACAT 57.232 34.783 0.00 0.00 0.00 2.29
3776 4961 7.266922 AGTTTCTTTCCGCACTTTACATTTA 57.733 32.000 0.00 0.00 0.00 1.40
3777 4962 7.360361 AGTTTCTTTCCGCACTTTACATTTAG 58.640 34.615 0.00 0.00 0.00 1.85
3778 4963 7.227910 AGTTTCTTTCCGCACTTTACATTTAGA 59.772 33.333 0.00 0.00 0.00 2.10
3779 4964 7.499321 TTCTTTCCGCACTTTACATTTAGAA 57.501 32.000 0.00 0.00 0.00 2.10
3788 4981 7.461107 GCACTTTACATTTAGAATGACGCTAA 58.539 34.615 7.59 0.00 0.00 3.09
3799 4992 1.497991 TGACGCTAAGTGTCACTTGC 58.502 50.000 25.41 22.77 46.14 4.01
3800 4993 1.068588 TGACGCTAAGTGTCACTTGCT 59.931 47.619 25.41 15.78 46.14 3.91
3805 4998 2.612972 GCTAAGTGTCACTTGCTAGCCA 60.613 50.000 25.41 0.00 39.11 4.75
3815 5008 5.297776 GTCACTTGCTAGCCATTTGATATGT 59.702 40.000 13.29 0.00 0.00 2.29
3819 5012 3.814842 TGCTAGCCATTTGATATGTTCCG 59.185 43.478 13.29 0.00 0.00 4.30
3821 5014 4.994852 GCTAGCCATTTGATATGTTCCGTA 59.005 41.667 2.29 0.00 0.00 4.02
3827 5020 6.173339 CCATTTGATATGTTCCGTATAGCCT 58.827 40.000 0.00 0.00 0.00 4.58
3828 5021 7.327975 CCATTTGATATGTTCCGTATAGCCTA 58.672 38.462 0.00 0.00 0.00 3.93
3830 5023 9.035607 CATTTGATATGTTCCGTATAGCCTATC 57.964 37.037 0.00 0.00 0.00 2.08
3832 5025 5.298527 TGATATGTTCCGTATAGCCTATCGG 59.701 44.000 13.23 13.23 43.65 4.18
3864 5057 4.164252 GACCATGTCACGGTCGTC 57.836 61.111 1.65 0.00 43.36 4.20
3865 5058 1.585006 GACCATGTCACGGTCGTCT 59.415 57.895 1.65 0.00 43.36 4.18
3866 5059 0.806868 GACCATGTCACGGTCGTCTA 59.193 55.000 1.65 0.00 43.36 2.59
3867 5060 1.404391 GACCATGTCACGGTCGTCTAT 59.596 52.381 1.65 0.00 43.36 1.98
3868 5061 1.822990 ACCATGTCACGGTCGTCTATT 59.177 47.619 0.00 0.00 27.30 1.73
3869 5062 2.193447 CCATGTCACGGTCGTCTATTG 58.807 52.381 0.00 0.00 0.00 1.90
3870 5063 2.416836 CCATGTCACGGTCGTCTATTGT 60.417 50.000 0.00 0.00 0.00 2.71
3871 5064 3.181494 CCATGTCACGGTCGTCTATTGTA 60.181 47.826 0.00 0.00 0.00 2.41
3872 5065 4.417506 CATGTCACGGTCGTCTATTGTAA 58.582 43.478 0.00 0.00 0.00 2.41
3873 5066 3.825308 TGTCACGGTCGTCTATTGTAAC 58.175 45.455 0.00 0.00 0.00 2.50
3874 5067 3.252944 TGTCACGGTCGTCTATTGTAACA 59.747 43.478 0.00 0.00 0.00 2.41
3875 5068 4.082625 TGTCACGGTCGTCTATTGTAACAT 60.083 41.667 0.00 0.00 0.00 2.71
3876 5069 4.264614 GTCACGGTCGTCTATTGTAACATG 59.735 45.833 0.00 0.00 0.00 3.21
3877 5070 3.550275 CACGGTCGTCTATTGTAACATGG 59.450 47.826 0.00 0.00 0.00 3.66
3878 5071 3.444742 ACGGTCGTCTATTGTAACATGGA 59.555 43.478 0.00 0.00 0.00 3.41
3879 5072 3.795101 CGGTCGTCTATTGTAACATGGAC 59.205 47.826 0.00 0.00 0.00 4.02
3880 5073 4.117685 GGTCGTCTATTGTAACATGGACC 58.882 47.826 0.00 0.00 35.21 4.46
3881 5074 4.382254 GGTCGTCTATTGTAACATGGACCA 60.382 45.833 0.00 0.00 40.76 4.02
3882 5075 4.565564 GTCGTCTATTGTAACATGGACCAC 59.434 45.833 0.00 0.00 0.00 4.16
3883 5076 3.550275 CGTCTATTGTAACATGGACCACG 59.450 47.826 0.00 0.00 0.00 4.94
3884 5077 4.501071 GTCTATTGTAACATGGACCACGT 58.499 43.478 0.00 0.00 0.00 4.49
3885 5078 4.933400 GTCTATTGTAACATGGACCACGTT 59.067 41.667 11.23 11.23 0.00 3.99
3886 5079 4.932799 TCTATTGTAACATGGACCACGTTG 59.067 41.667 16.04 4.07 0.00 4.10
3887 5080 2.623878 TGTAACATGGACCACGTTGT 57.376 45.000 16.04 4.75 0.00 3.32
3888 5081 2.214347 TGTAACATGGACCACGTTGTG 58.786 47.619 16.04 3.29 0.00 3.33
3889 5082 2.158943 TGTAACATGGACCACGTTGTGA 60.159 45.455 16.04 0.00 35.23 3.58
3890 5083 2.270352 AACATGGACCACGTTGTGAT 57.730 45.000 4.87 0.00 35.23 3.06
3891 5084 1.808411 ACATGGACCACGTTGTGATC 58.192 50.000 0.00 0.00 35.23 2.92
3917 5110 2.233271 CAGCATGGACTTTTGGTCACT 58.767 47.619 0.00 0.00 46.16 3.41
3918 5111 2.030540 CAGCATGGACTTTTGGTCACTG 60.031 50.000 0.00 0.00 46.16 3.66
3938 5131 1.039068 TTGCAACTGGACCCATGTTG 58.961 50.000 18.49 18.49 42.55 3.33
3941 5134 1.603455 AACTGGACCCATGTTGCGG 60.603 57.895 0.00 0.00 0.00 5.69
3946 5139 1.302511 GACCCATGTTGCGGTCACT 60.303 57.895 12.46 0.00 46.59 3.41
3947 5140 1.577328 GACCCATGTTGCGGTCACTG 61.577 60.000 12.46 0.00 46.59 3.66
3957 5150 2.139917 TGCGGTCACTGATTACAACAC 58.860 47.619 0.00 0.00 0.00 3.32
3960 5153 2.073816 GGTCACTGATTACAACACGGG 58.926 52.381 0.00 0.00 0.00 5.28
3961 5154 1.463444 GTCACTGATTACAACACGGGC 59.537 52.381 0.00 0.00 0.00 6.13
3982 5175 1.140312 ATGTTGTGGTCACCTCTGGT 58.860 50.000 0.00 0.00 35.62 4.00
3988 5181 0.465460 TGGTCACCTCTGGTTTGCAC 60.465 55.000 0.00 0.00 31.02 4.57
3991 5184 0.396435 TCACCTCTGGTTTGCACGAT 59.604 50.000 0.00 0.00 31.02 3.73
3993 5186 2.236146 TCACCTCTGGTTTGCACGATAT 59.764 45.455 0.00 0.00 31.02 1.63
3997 5190 2.279741 TCTGGTTTGCACGATATGAGC 58.720 47.619 0.00 0.00 34.41 4.26
4043 5266 1.961277 GTGTTGCGGTCACCTCCAG 60.961 63.158 0.00 0.00 0.00 3.86
4066 5289 1.436600 TGACGACCGAGTAGACAGAC 58.563 55.000 0.00 0.00 0.00 3.51
4083 5306 4.803426 CTCGTCGCAGCTCCACCC 62.803 72.222 0.00 0.00 0.00 4.61
4093 5321 3.197790 CTCCACCCGCAAGCATCG 61.198 66.667 0.00 0.00 0.00 3.84
4122 5350 1.992170 GCCTCTTGCAGCAAAAGATG 58.008 50.000 10.26 2.77 40.77 2.90
4133 5361 2.589798 CAAAAGATGCCGCCATTGAT 57.410 45.000 0.00 0.00 0.00 2.57
4134 5362 2.198406 CAAAAGATGCCGCCATTGATG 58.802 47.619 0.00 0.00 0.00 3.07
4135 5363 0.103572 AAAGATGCCGCCATTGATGC 59.896 50.000 0.00 0.00 0.00 3.91
4136 5364 0.754217 AAGATGCCGCCATTGATGCT 60.754 50.000 0.00 0.00 0.00 3.79
4137 5365 0.109153 AGATGCCGCCATTGATGCTA 59.891 50.000 0.00 0.00 0.00 3.49
4138 5366 0.520404 GATGCCGCCATTGATGCTAG 59.480 55.000 0.00 0.00 0.00 3.42
4139 5367 0.892358 ATGCCGCCATTGATGCTAGG 60.892 55.000 0.00 0.00 0.00 3.02
4140 5368 1.526917 GCCGCCATTGATGCTAGGT 60.527 57.895 0.00 0.00 0.00 3.08
4141 5369 1.789078 GCCGCCATTGATGCTAGGTG 61.789 60.000 0.00 0.00 0.00 4.00
4142 5370 0.464373 CCGCCATTGATGCTAGGTGT 60.464 55.000 0.00 0.00 0.00 4.16
4143 5371 1.382522 CGCCATTGATGCTAGGTGTT 58.617 50.000 0.00 0.00 0.00 3.32
4144 5372 1.331756 CGCCATTGATGCTAGGTGTTC 59.668 52.381 0.00 0.00 0.00 3.18
4145 5373 1.331756 GCCATTGATGCTAGGTGTTCG 59.668 52.381 0.00 0.00 0.00 3.95
4146 5374 1.331756 CCATTGATGCTAGGTGTTCGC 59.668 52.381 0.00 0.00 0.00 4.70
4147 5375 1.331756 CATTGATGCTAGGTGTTCGCC 59.668 52.381 0.00 0.00 0.00 5.54
4148 5376 0.739462 TTGATGCTAGGTGTTCGCCG 60.739 55.000 0.00 0.00 0.00 6.46
4149 5377 1.153628 GATGCTAGGTGTTCGCCGT 60.154 57.895 0.00 0.00 0.00 5.68
4150 5378 1.421410 GATGCTAGGTGTTCGCCGTG 61.421 60.000 0.00 0.00 0.00 4.94
4151 5379 3.488090 GCTAGGTGTTCGCCGTGC 61.488 66.667 0.00 6.83 0.00 5.34
4152 5380 2.048597 CTAGGTGTTCGCCGTGCA 60.049 61.111 0.00 0.00 0.00 4.57
4200 5428 4.614673 CAACAGTTGCCGTCTTGC 57.385 55.556 0.00 0.00 0.00 4.01
4201 5429 1.008538 CAACAGTTGCCGTCTTGCC 60.009 57.895 0.00 0.00 0.00 4.52
4202 5430 2.542907 AACAGTTGCCGTCTTGCCG 61.543 57.895 0.00 0.00 0.00 5.69
4204 5432 2.110213 AGTTGCCGTCTTGCCGAA 59.890 55.556 0.00 0.00 0.00 4.30
4205 5433 1.302511 AGTTGCCGTCTTGCCGAAT 60.303 52.632 0.00 0.00 0.00 3.34
4206 5434 1.134694 GTTGCCGTCTTGCCGAATC 59.865 57.895 0.00 0.00 0.00 2.52
4207 5435 2.038269 TTGCCGTCTTGCCGAATCC 61.038 57.895 0.00 0.00 0.00 3.01
4208 5436 2.435938 GCCGTCTTGCCGAATCCA 60.436 61.111 0.00 0.00 0.00 3.41
4209 5437 2.038269 GCCGTCTTGCCGAATCCAA 61.038 57.895 0.00 0.00 0.00 3.53
4210 5438 1.582610 GCCGTCTTGCCGAATCCAAA 61.583 55.000 0.00 0.00 0.00 3.28
4211 5439 0.447801 CCGTCTTGCCGAATCCAAAG 59.552 55.000 0.00 0.00 0.00 2.77
4212 5440 0.179189 CGTCTTGCCGAATCCAAAGC 60.179 55.000 0.00 0.00 0.00 3.51
4213 5441 0.881118 GTCTTGCCGAATCCAAAGCA 59.119 50.000 0.00 0.00 0.00 3.91
4214 5442 1.269448 GTCTTGCCGAATCCAAAGCAA 59.731 47.619 0.00 0.00 42.60 3.91
4215 5443 1.269448 TCTTGCCGAATCCAAAGCAAC 59.731 47.619 0.00 0.00 40.13 4.17
4216 5444 0.039617 TTGCCGAATCCAAAGCAACG 60.040 50.000 0.00 0.00 40.13 4.10
4217 5445 1.154035 GCCGAATCCAAAGCAACGG 60.154 57.895 0.00 0.00 42.63 4.44
4218 5446 1.582610 GCCGAATCCAAAGCAACGGA 61.583 55.000 0.00 0.00 42.40 4.69
4219 5447 1.094785 CCGAATCCAAAGCAACGGAT 58.905 50.000 0.00 0.00 44.09 4.18
4220 5448 1.202177 CCGAATCCAAAGCAACGGATG 60.202 52.381 0.00 0.00 41.28 3.51
4221 5449 1.202177 CGAATCCAAAGCAACGGATGG 60.202 52.381 1.97 0.00 41.28 3.51
4222 5450 2.091541 GAATCCAAAGCAACGGATGGA 58.908 47.619 1.97 0.00 45.42 3.41
4223 5451 2.442236 ATCCAAAGCAACGGATGGAT 57.558 45.000 0.41 0.41 45.18 3.41
4224 5452 1.750193 TCCAAAGCAACGGATGGATC 58.250 50.000 0.00 0.00 37.05 3.36
4228 5456 1.683943 AAGCAACGGATGGATCATGG 58.316 50.000 0.00 0.00 0.00 3.66
4241 5469 6.102321 GGATGGATCATGGAGGGTCATATATT 59.898 42.308 0.00 0.00 0.00 1.28
4254 5482 5.316167 GGTCATATATTTGACTGATGGCCA 58.684 41.667 21.00 8.56 44.39 5.36
4307 5535 3.885358 GTAACAGCAAAGTTACCTGCAC 58.115 45.455 12.95 0.00 45.01 4.57
4308 5536 1.318576 ACAGCAAAGTTACCTGCACC 58.681 50.000 9.25 0.00 41.17 5.01
4309 5537 0.598065 CAGCAAAGTTACCTGCACCC 59.402 55.000 9.25 0.00 41.17 4.61
4310 5538 0.478507 AGCAAAGTTACCTGCACCCT 59.521 50.000 9.25 0.00 41.17 4.34
4311 5539 1.702957 AGCAAAGTTACCTGCACCCTA 59.297 47.619 9.25 0.00 41.17 3.53
4312 5540 2.107552 AGCAAAGTTACCTGCACCCTAA 59.892 45.455 9.25 0.00 41.17 2.69
4313 5541 2.228103 GCAAAGTTACCTGCACCCTAAC 59.772 50.000 2.65 0.00 38.48 2.34
4314 5542 3.482436 CAAAGTTACCTGCACCCTAACA 58.518 45.455 6.31 0.00 0.00 2.41
4315 5543 3.868619 AAGTTACCTGCACCCTAACAA 57.131 42.857 6.31 0.00 0.00 2.83
4316 5544 4.382386 AAGTTACCTGCACCCTAACAAT 57.618 40.909 6.31 0.00 0.00 2.71
4317 5545 4.382386 AGTTACCTGCACCCTAACAATT 57.618 40.909 6.31 0.00 0.00 2.32
4318 5546 4.736473 AGTTACCTGCACCCTAACAATTT 58.264 39.130 6.31 0.00 0.00 1.82
4319 5547 4.765339 AGTTACCTGCACCCTAACAATTTC 59.235 41.667 6.31 0.00 0.00 2.17
4320 5548 3.525800 ACCTGCACCCTAACAATTTCT 57.474 42.857 0.00 0.00 0.00 2.52
4321 5549 3.844640 ACCTGCACCCTAACAATTTCTT 58.155 40.909 0.00 0.00 0.00 2.52
4322 5550 3.826729 ACCTGCACCCTAACAATTTCTTC 59.173 43.478 0.00 0.00 0.00 2.87
4323 5551 3.826157 CCTGCACCCTAACAATTTCTTCA 59.174 43.478 0.00 0.00 0.00 3.02
4324 5552 4.280677 CCTGCACCCTAACAATTTCTTCAA 59.719 41.667 0.00 0.00 0.00 2.69
4325 5553 5.221422 CCTGCACCCTAACAATTTCTTCAAA 60.221 40.000 0.00 0.00 0.00 2.69
4326 5554 6.227298 TGCACCCTAACAATTTCTTCAAAA 57.773 33.333 0.00 0.00 0.00 2.44
4327 5555 6.644347 TGCACCCTAACAATTTCTTCAAAAA 58.356 32.000 0.00 0.00 0.00 1.94
4346 5574 5.986501 AAAAATATTCAGCCCGTGGTAAA 57.013 34.783 0.00 0.00 0.00 2.01
4347 5575 4.976224 AAATATTCAGCCCGTGGTAAAC 57.024 40.909 0.00 0.00 0.00 2.01
4348 5576 3.926058 ATATTCAGCCCGTGGTAAACT 57.074 42.857 0.00 0.00 0.00 2.66
4354 5582 1.239296 GCCCGTGGTAAACTGGAACC 61.239 60.000 0.00 0.00 35.21 3.62
4392 5620 7.016268 TCTGAACTCAGACACCTTTATTTAGGT 59.984 37.037 5.29 0.00 46.94 3.08
4416 5644 7.361799 GGTCATGTTTGGTTCATAAGTCCTAAC 60.362 40.741 0.00 0.00 37.43 2.34
4424 5652 7.936584 TGGTTCATAAGTCCTAACACTTTTTG 58.063 34.615 0.00 0.00 37.75 2.44
4430 5659 4.715713 AGTCCTAACACTTTTTGAGTCCC 58.284 43.478 0.00 0.00 36.10 4.46
4440 5669 8.472007 ACACTTTTTGAGTCCCAACATATAAA 57.528 30.769 0.00 0.00 36.10 1.40
4442 5671 9.927668 CACTTTTTGAGTCCCAACATATAAATT 57.072 29.630 0.00 0.00 36.10 1.82
4465 5694 6.713731 TTCAAGTCCCTAAAAAGTCCCTAT 57.286 37.500 0.00 0.00 0.00 2.57
4466 5695 6.309389 TCAAGTCCCTAAAAAGTCCCTATC 57.691 41.667 0.00 0.00 0.00 2.08
4468 5697 7.194050 TCAAGTCCCTAAAAAGTCCCTATCTA 58.806 38.462 0.00 0.00 0.00 1.98
4479 5708 6.910259 AAGTCCCTATCTATTTGGTTCCTT 57.090 37.500 0.00 0.00 0.00 3.36
4487 5716 8.272173 CCTATCTATTTGGTTCCTTGGACTTAA 58.728 37.037 0.00 0.00 0.00 1.85
4488 5717 7.939784 ATCTATTTGGTTCCTTGGACTTAAC 57.060 36.000 0.00 0.00 0.00 2.01
4490 5719 7.466804 TCTATTTGGTTCCTTGGACTTAACAT 58.533 34.615 0.00 0.00 0.00 2.71
4491 5720 5.782893 TTTGGTTCCTTGGACTTAACATG 57.217 39.130 0.00 0.00 0.00 3.21
4492 5721 4.715534 TGGTTCCTTGGACTTAACATGA 57.284 40.909 0.00 0.00 0.00 3.07
4493 5722 5.055265 TGGTTCCTTGGACTTAACATGAA 57.945 39.130 0.00 0.00 0.00 2.57
4497 5726 6.713450 GGTTCCTTGGACTTAACATGAACTAA 59.287 38.462 0.00 0.00 33.79 2.24
4503 5732 8.974060 TTGGACTTAACATGAACTAAAAGACT 57.026 30.769 0.00 0.00 0.00 3.24
4579 5808 6.964876 ACCCACTTTAAGTCCCTATAAGTT 57.035 37.500 0.00 0.00 0.00 2.66
4582 5811 6.354938 CCACTTTAAGTCCCTATAAGTTCCC 58.645 44.000 0.00 0.00 0.00 3.97
4600 5830 2.990284 TCCCCTGTTTGGTTTAGATGGA 59.010 45.455 0.00 0.00 0.00 3.41
4608 5838 9.238368 CCTGTTTGGTTTAGATGGAACTTATAA 57.762 33.333 0.00 0.00 0.00 0.98
4613 5843 7.571025 TGGTTTAGATGGAACTTATAAGGACC 58.429 38.462 16.73 17.25 0.00 4.46
4615 5845 8.272889 GGTTTAGATGGAACTTATAAGGACCTT 58.727 37.037 21.95 12.41 0.00 3.50
4658 5888 2.764010 GTCCCTGAAAACAAACACCCTT 59.236 45.455 0.00 0.00 0.00 3.95
4659 5889 3.955551 GTCCCTGAAAACAAACACCCTTA 59.044 43.478 0.00 0.00 0.00 2.69
4662 5892 3.243737 CCTGAAAACAAACACCCTTAGCC 60.244 47.826 0.00 0.00 0.00 3.93
4690 5920 2.159599 CGAATTTGGAGCTCTTGAGCAC 60.160 50.000 22.44 16.62 37.25 4.40
4732 5964 4.107051 GCAGCATTTCACGCCGCT 62.107 61.111 0.00 0.00 34.29 5.52
4743 5975 2.664185 CGCCGCTGAGCTGCATAT 60.664 61.111 20.36 0.00 38.65 1.78
4748 5980 0.866427 CGCTGAGCTGCATATTCCAG 59.134 55.000 1.78 0.00 0.00 3.86
4752 5984 4.147701 GCTGCATATTCCAGCGGT 57.852 55.556 8.83 0.00 45.20 5.68
4757 5989 1.836391 CATATTCCAGCGGTGGGGA 59.164 57.895 31.91 21.33 45.11 4.81
4759 5991 0.182775 ATATTCCAGCGGTGGGGAAC 59.817 55.000 31.91 0.00 45.35 3.62
4776 6008 2.094545 GGAACATTCAGGATGGTTGTGC 60.095 50.000 0.00 0.00 35.26 4.57
4787 6025 1.246649 TGGTTGTGCCACACATCATC 58.753 50.000 0.00 0.00 44.16 2.92
4891 6414 0.879400 GCCATGTCGGAGCTGATGAG 60.879 60.000 0.00 0.00 36.56 2.90
5213 6758 2.031012 TGAGCAACCTCGGCACTG 59.969 61.111 0.00 0.00 41.13 3.66
5226 6771 1.403647 CGGCACTGTATTCCGTCAGAA 60.404 52.381 7.02 0.00 38.47 3.02
5356 6924 2.825836 GGGATGCAGTTCGGGCTG 60.826 66.667 0.00 3.34 39.37 4.85
5529 7101 3.274288 GAGTGGGATCATGAAACAGGAC 58.726 50.000 0.00 0.00 0.00 3.85
5566 7138 4.732285 ACGTGCAAAACTAGAGTTCATG 57.268 40.909 0.00 0.31 37.25 3.07
5567 7139 4.377021 ACGTGCAAAACTAGAGTTCATGA 58.623 39.130 0.00 0.00 37.25 3.07
5568 7140 4.814234 ACGTGCAAAACTAGAGTTCATGAA 59.186 37.500 3.38 3.38 37.25 2.57
5668 7262 0.978146 CTCTGATCCCCCTCGGTTGT 60.978 60.000 0.00 0.00 0.00 3.32
6143 8108 4.261801 CCGTGGAATTTCAGAGGTAATGT 58.738 43.478 0.00 0.00 0.00 2.71
6195 8160 0.834687 AACCCACTGAAGTCGCCCTA 60.835 55.000 0.00 0.00 0.00 3.53
6497 8666 4.034258 GCATGGCGATGGCATCCG 62.034 66.667 21.20 16.48 45.69 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.372087 GCCTTCAAGCGTCTCATGGG 61.372 60.000 0.00 0.00 0.00 4.00
49 50 0.745845 AAGCATCGAGGCACCATGAC 60.746 55.000 25.38 0.00 35.83 3.06
62 63 3.394606 TCCCTTCCCAGGTATAAAGCATC 59.605 47.826 0.00 0.00 38.79 3.91
76 77 2.173782 GAGATTCTTCCCTTCCCTTCCC 59.826 54.545 0.00 0.00 0.00 3.97
77 78 2.173782 GGAGATTCTTCCCTTCCCTTCC 59.826 54.545 0.00 0.00 0.00 3.46
78 79 2.846827 TGGAGATTCTTCCCTTCCCTTC 59.153 50.000 0.00 0.00 36.35 3.46
79 80 2.934722 TGGAGATTCTTCCCTTCCCTT 58.065 47.619 0.00 0.00 36.35 3.95
80 81 2.668850 TGGAGATTCTTCCCTTCCCT 57.331 50.000 0.00 0.00 36.35 4.20
160 161 1.254975 AACAATTACAAGGGGCGCCC 61.255 55.000 38.57 38.57 45.90 6.13
193 194 3.876309 TGTAAGCCCCAAACTTCTTCT 57.124 42.857 0.00 0.00 0.00 2.85
194 195 3.127030 CGATGTAAGCCCCAAACTTCTTC 59.873 47.826 0.00 0.00 0.00 2.87
195 196 3.081804 CGATGTAAGCCCCAAACTTCTT 58.918 45.455 0.00 0.00 0.00 2.52
221 222 8.272889 TCTTGCCCAGAGACGTATATATAGTAT 58.727 37.037 0.00 0.00 0.00 2.12
312 326 1.002430 CCTCTGTGGCTCACTGCTTTA 59.998 52.381 6.83 0.00 42.39 1.85
314 328 1.374190 CCTCTGTGGCTCACTGCTT 59.626 57.895 6.83 0.00 42.39 3.91
315 329 1.825281 GACCTCTGTGGCTCACTGCT 61.825 60.000 6.83 0.00 42.39 4.24
338 352 2.166459 TCGGAATACAGCAGTTCCAGAG 59.834 50.000 5.15 0.00 43.22 3.35
347 361 5.062934 CGACAAGTAATTTCGGAATACAGCA 59.937 40.000 0.00 0.00 0.00 4.41
357 371 4.788100 CCATTTCTGCGACAAGTAATTTCG 59.212 41.667 0.00 4.05 35.82 3.46
358 372 5.938322 TCCATTTCTGCGACAAGTAATTTC 58.062 37.500 0.00 0.00 0.00 2.17
359 373 5.957842 TCCATTTCTGCGACAAGTAATTT 57.042 34.783 0.00 0.00 0.00 1.82
360 374 7.624360 TTATCCATTTCTGCGACAAGTAATT 57.376 32.000 0.00 0.00 0.00 1.40
362 376 7.441890 TTTTATCCATTTCTGCGACAAGTAA 57.558 32.000 0.00 0.00 0.00 2.24
363 377 7.335673 TCATTTTATCCATTTCTGCGACAAGTA 59.664 33.333 0.00 0.00 0.00 2.24
364 378 5.957842 TTTTATCCATTTCTGCGACAAGT 57.042 34.783 0.00 0.00 0.00 3.16
365 379 6.554419 TCATTTTATCCATTTCTGCGACAAG 58.446 36.000 0.00 0.00 0.00 3.16
366 380 6.507958 TCATTTTATCCATTTCTGCGACAA 57.492 33.333 0.00 0.00 0.00 3.18
367 381 6.507958 TTCATTTTATCCATTTCTGCGACA 57.492 33.333 0.00 0.00 0.00 4.35
370 384 9.121517 GATACATTCATTTTATCCATTTCTGCG 57.878 33.333 0.00 0.00 0.00 5.18
377 391 9.784531 AGTTCGAGATACATTCATTTTATCCAT 57.215 29.630 0.00 0.00 0.00 3.41
390 404 9.265901 CCAGATGAATTTTAGTTCGAGATACAT 57.734 33.333 0.00 0.00 0.00 2.29
391 405 8.474831 TCCAGATGAATTTTAGTTCGAGATACA 58.525 33.333 0.00 0.00 0.00 2.29
392 406 8.873215 TCCAGATGAATTTTAGTTCGAGATAC 57.127 34.615 0.00 0.00 0.00 2.24
394 408 8.970859 ATTCCAGATGAATTTTAGTTCGAGAT 57.029 30.769 0.00 0.00 40.92 2.75
407 421 6.543465 TCTGCGACAAATAATTCCAGATGAAT 59.457 34.615 0.00 0.00 45.75 2.57
408 422 5.879777 TCTGCGACAAATAATTCCAGATGAA 59.120 36.000 0.00 0.00 37.38 2.57
410 424 5.739752 TCTGCGACAAATAATTCCAGATG 57.260 39.130 0.00 0.00 0.00 2.90
411 425 6.757897 TTTCTGCGACAAATAATTCCAGAT 57.242 33.333 0.00 0.00 0.00 2.90
412 426 6.404623 CCATTTCTGCGACAAATAATTCCAGA 60.405 38.462 0.00 0.00 0.00 3.86
413 427 5.745294 CCATTTCTGCGACAAATAATTCCAG 59.255 40.000 0.00 0.00 0.00 3.86
414 428 5.417266 TCCATTTCTGCGACAAATAATTCCA 59.583 36.000 0.00 0.00 0.00 3.53
416 430 9.515020 TTTATCCATTTCTGCGACAAATAATTC 57.485 29.630 0.00 0.00 0.00 2.17
417 431 9.868277 TTTTATCCATTTCTGCGACAAATAATT 57.132 25.926 0.00 0.00 0.00 1.40
419 433 9.299963 CATTTTATCCATTTCTGCGACAAATAA 57.700 29.630 0.00 0.00 0.00 1.40
420 434 7.920151 CCATTTTATCCATTTCTGCGACAAATA 59.080 33.333 0.00 0.00 0.00 1.40
421 435 6.757947 CCATTTTATCCATTTCTGCGACAAAT 59.242 34.615 0.00 0.00 0.00 2.32
422 436 6.071672 TCCATTTTATCCATTTCTGCGACAAA 60.072 34.615 0.00 0.00 0.00 2.83
423 437 5.417266 TCCATTTTATCCATTTCTGCGACAA 59.583 36.000 0.00 0.00 0.00 3.18
424 438 4.946772 TCCATTTTATCCATTTCTGCGACA 59.053 37.500 0.00 0.00 0.00 4.35
425 439 5.499139 TCCATTTTATCCATTTCTGCGAC 57.501 39.130 0.00 0.00 0.00 5.19
426 440 5.593909 ACATCCATTTTATCCATTTCTGCGA 59.406 36.000 0.00 0.00 0.00 5.10
427 441 5.835257 ACATCCATTTTATCCATTTCTGCG 58.165 37.500 0.00 0.00 0.00 5.18
428 442 8.800332 AGATACATCCATTTTATCCATTTCTGC 58.200 33.333 0.00 0.00 0.00 4.26
476 490 8.840321 CGAAATACTTGTTGGAGAAATGGATAT 58.160 33.333 0.00 0.00 0.00 1.63
477 491 7.282224 CCGAAATACTTGTTGGAGAAATGGATA 59.718 37.037 0.00 0.00 0.00 2.59
478 492 6.095440 CCGAAATACTTGTTGGAGAAATGGAT 59.905 38.462 0.00 0.00 0.00 3.41
479 493 5.414454 CCGAAATACTTGTTGGAGAAATGGA 59.586 40.000 0.00 0.00 0.00 3.41
480 494 5.393027 CCCGAAATACTTGTTGGAGAAATGG 60.393 44.000 0.00 0.00 0.00 3.16
481 495 5.414454 TCCCGAAATACTTGTTGGAGAAATG 59.586 40.000 0.00 0.00 0.00 2.32
482 496 5.414765 GTCCCGAAATACTTGTTGGAGAAAT 59.585 40.000 0.00 0.00 0.00 2.17
483 497 4.758165 GTCCCGAAATACTTGTTGGAGAAA 59.242 41.667 0.00 0.00 0.00 2.52
484 498 4.041198 AGTCCCGAAATACTTGTTGGAGAA 59.959 41.667 0.00 0.00 0.00 2.87
485 499 3.581332 AGTCCCGAAATACTTGTTGGAGA 59.419 43.478 0.00 0.00 0.00 3.71
486 500 3.684788 CAGTCCCGAAATACTTGTTGGAG 59.315 47.826 0.00 0.00 0.00 3.86
487 501 3.325425 TCAGTCCCGAAATACTTGTTGGA 59.675 43.478 0.00 0.00 0.00 3.53
488 502 3.670625 TCAGTCCCGAAATACTTGTTGG 58.329 45.455 0.00 0.00 0.00 3.77
489 503 3.684788 CCTCAGTCCCGAAATACTTGTTG 59.315 47.826 0.00 0.00 0.00 3.33
490 504 3.307480 CCCTCAGTCCCGAAATACTTGTT 60.307 47.826 0.00 0.00 0.00 2.83
491 505 2.236395 CCCTCAGTCCCGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
492 506 2.500098 TCCCTCAGTCCCGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
493 507 2.766828 CTCCCTCAGTCCCGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
494 508 2.389715 CTCCCTCAGTCCCGAAATACT 58.610 52.381 0.00 0.00 0.00 2.12
495 509 1.202545 GCTCCCTCAGTCCCGAAATAC 60.203 57.143 0.00 0.00 0.00 1.89
496 510 1.120530 GCTCCCTCAGTCCCGAAATA 58.879 55.000 0.00 0.00 0.00 1.40
497 511 0.909610 TGCTCCCTCAGTCCCGAAAT 60.910 55.000 0.00 0.00 0.00 2.17
498 512 1.535444 TGCTCCCTCAGTCCCGAAA 60.535 57.895 0.00 0.00 0.00 3.46
499 513 2.119611 TGCTCCCTCAGTCCCGAA 59.880 61.111 0.00 0.00 0.00 4.30
500 514 2.680352 GTGCTCCCTCAGTCCCGA 60.680 66.667 0.00 0.00 0.00 5.14
501 515 1.043116 TATGTGCTCCCTCAGTCCCG 61.043 60.000 0.00 0.00 0.00 5.14
502 516 1.428869 ATATGTGCTCCCTCAGTCCC 58.571 55.000 0.00 0.00 0.00 4.46
503 517 3.643792 AGTTATATGTGCTCCCTCAGTCC 59.356 47.826 0.00 0.00 0.00 3.85
504 518 4.946478 AGTTATATGTGCTCCCTCAGTC 57.054 45.455 0.00 0.00 0.00 3.51
505 519 5.706447 TCTAGTTATATGTGCTCCCTCAGT 58.294 41.667 0.00 0.00 0.00 3.41
506 520 6.451393 GTTCTAGTTATATGTGCTCCCTCAG 58.549 44.000 0.00 0.00 0.00 3.35
507 521 5.304614 GGTTCTAGTTATATGTGCTCCCTCA 59.695 44.000 0.00 0.00 0.00 3.86
508 522 5.304614 TGGTTCTAGTTATATGTGCTCCCTC 59.695 44.000 0.00 0.00 0.00 4.30
510 524 5.546621 TGGTTCTAGTTATATGTGCTCCC 57.453 43.478 0.00 0.00 0.00 4.30
512 526 5.991606 TGCATGGTTCTAGTTATATGTGCTC 59.008 40.000 0.00 0.00 0.00 4.26
522 536 1.457346 GCAGCTGCATGGTTCTAGTT 58.543 50.000 33.36 0.00 41.59 2.24
523 537 3.165606 GCAGCTGCATGGTTCTAGT 57.834 52.632 33.36 0.00 41.59 2.57
570 609 8.718734 GGAATTATTATGGGTTACGTCAAGATC 58.281 37.037 0.00 0.00 0.00 2.75
572 611 7.566569 TGGAATTATTATGGGTTACGTCAAGA 58.433 34.615 0.00 0.00 0.00 3.02
576 615 7.499895 TCCTTTGGAATTATTATGGGTTACGTC 59.500 37.037 0.00 0.00 0.00 4.34
577 616 7.283807 GTCCTTTGGAATTATTATGGGTTACGT 59.716 37.037 0.00 0.00 31.38 3.57
580 619 9.416284 GAAGTCCTTTGGAATTATTATGGGTTA 57.584 33.333 0.00 0.00 40.23 2.85
584 623 8.752005 TGAGAAGTCCTTTGGAATTATTATGG 57.248 34.615 0.00 0.00 40.23 2.74
590 629 5.882557 GCTCATGAGAAGTCCTTTGGAATTA 59.117 40.000 27.04 0.00 40.23 1.40
598 637 3.996921 ATGTGCTCATGAGAAGTCCTT 57.003 42.857 27.04 0.00 32.51 3.36
620 659 1.404315 GCCGGTAGGTCAAGTTCTGAG 60.404 57.143 1.90 0.00 40.50 3.35
627 666 2.798148 AAAGCCGCCGGTAGGTCAAG 62.798 60.000 17.36 0.00 40.50 3.02
628 667 2.400269 AAAAGCCGCCGGTAGGTCAA 62.400 55.000 17.36 0.00 40.50 3.18
637 676 0.317519 AACGAAAAGAAAAGCCGCCG 60.318 50.000 0.00 0.00 0.00 6.46
638 677 1.001706 AGAACGAAAAGAAAAGCCGCC 60.002 47.619 0.00 0.00 0.00 6.13
639 678 2.307929 GAGAACGAAAAGAAAAGCCGC 58.692 47.619 0.00 0.00 0.00 6.53
646 685 3.788937 AGGTTGACGAGAACGAAAAGAA 58.211 40.909 0.00 0.00 42.66 2.52
666 705 4.013050 TCTGATGATGATAGGCCGACTAG 58.987 47.826 0.00 0.00 34.56 2.57
713 753 7.379529 GGATTACAAAATGTGCCAGATTAATCG 59.620 37.037 9.78 5.27 0.00 3.34
719 759 6.549433 AATGGATTACAAAATGTGCCAGAT 57.451 33.333 0.00 0.00 33.31 2.90
732 772 7.012327 GCATCTACTGCTTTGTAATGGATTACA 59.988 37.037 7.93 7.93 46.66 2.41
751 791 2.100584 CTGAGAGTGGACTGGCATCTAC 59.899 54.545 0.00 0.00 0.00 2.59
758 798 0.605589 GGTCACTGAGAGTGGACTGG 59.394 60.000 3.96 0.00 45.94 4.00
800 854 2.703007 GGCAGAGGATAGACAATGGAGT 59.297 50.000 0.00 0.00 0.00 3.85
801 855 2.702478 TGGCAGAGGATAGACAATGGAG 59.298 50.000 0.00 0.00 0.00 3.86
802 856 2.702478 CTGGCAGAGGATAGACAATGGA 59.298 50.000 9.42 0.00 0.00 3.41
803 857 2.702478 TCTGGCAGAGGATAGACAATGG 59.298 50.000 14.43 0.00 0.00 3.16
804 858 3.803021 GCTCTGGCAGAGGATAGACAATG 60.803 52.174 37.73 15.51 42.54 2.82
806 860 1.759445 GCTCTGGCAGAGGATAGACAA 59.241 52.381 37.73 5.88 42.54 3.18
807 861 1.063341 AGCTCTGGCAGAGGATAGACA 60.063 52.381 37.73 6.61 42.54 3.41
821 877 1.462670 GCGTCTTCTTTTGGAGCTCTG 59.537 52.381 14.64 0.00 0.00 3.35
839 895 5.703978 TTGGAATCCCATTTGTATATGCG 57.296 39.130 0.00 0.00 43.12 4.73
857 913 0.770499 TGCAGTGACCTTGGATTGGA 59.230 50.000 0.00 0.00 0.00 3.53
858 914 1.619654 TTGCAGTGACCTTGGATTGG 58.380 50.000 0.00 0.00 0.00 3.16
859 915 2.288395 GGTTTGCAGTGACCTTGGATTG 60.288 50.000 8.30 0.00 33.08 2.67
860 916 1.963515 GGTTTGCAGTGACCTTGGATT 59.036 47.619 8.30 0.00 33.08 3.01
861 917 1.145738 AGGTTTGCAGTGACCTTGGAT 59.854 47.619 11.45 0.00 43.64 3.41
890 946 1.355066 CTTTCGGGAGTCGCTTGCTC 61.355 60.000 5.58 0.00 39.05 4.26
891 947 1.374758 CTTTCGGGAGTCGCTTGCT 60.375 57.895 5.58 0.00 39.05 3.91
898 954 2.101233 GCCTTCGCTTTCGGGAGTC 61.101 63.158 0.00 0.00 36.13 3.36
938 994 3.961838 TAATGGCGGTGGCGGTGAC 62.962 63.158 0.00 0.00 41.24 3.67
939 995 3.255423 TTAATGGCGGTGGCGGTGA 62.255 57.895 0.00 0.00 41.24 4.02
940 996 2.748251 TTAATGGCGGTGGCGGTG 60.748 61.111 0.00 0.00 41.24 4.94
941 997 2.748647 GTTAATGGCGGTGGCGGT 60.749 61.111 0.00 0.00 41.24 5.68
951 1007 3.937706 CTCTGGAAGCTGACTGTTAATGG 59.062 47.826 0.00 0.00 0.00 3.16
973 1029 0.511653 GTTTGACCCTTTCGACGAGC 59.488 55.000 0.00 0.00 0.00 5.03
1026 1082 3.157949 GCGAGGAGGAAGGGGAGG 61.158 72.222 0.00 0.00 0.00 4.30
1055 1111 2.184579 CGTCCTTCTTCCCGAGGC 59.815 66.667 0.00 0.00 0.00 4.70
1490 1546 1.016653 AGAAGAAGAAGAAGCGGCGC 61.017 55.000 26.86 26.86 0.00 6.53
1491 1547 1.391826 GAAGAAGAAGAAGAAGCGGCG 59.608 52.381 0.51 0.51 0.00 6.46
1492 1548 1.735018 GGAAGAAGAAGAAGAAGCGGC 59.265 52.381 0.00 0.00 0.00 6.53
1493 1549 1.996191 CGGAAGAAGAAGAAGAAGCGG 59.004 52.381 0.00 0.00 0.00 5.52
1584 1640 3.541713 CTCGACAGCCTAGCCCCC 61.542 72.222 0.00 0.00 0.00 5.40
1588 1644 0.464735 TCCTCTCTCGACAGCCTAGC 60.465 60.000 0.00 0.00 0.00 3.42
1611 1667 2.612251 CTCCTCCCTCCTCCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
1612 1668 2.123033 GCTCCTCCCTCCTCCTCC 60.123 72.222 0.00 0.00 0.00 4.30
1613 1669 2.520741 CGCTCCTCCCTCCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
1689 1745 3.823330 AGCGCCGGGAAGTAGTCG 61.823 66.667 2.29 0.00 0.00 4.18
1749 1806 1.376037 CCGCCTGAAGTTCCTCCAC 60.376 63.158 0.00 0.00 0.00 4.02
1932 1995 5.250200 TGATAAGAACAACTTACCGCCAAT 58.750 37.500 0.00 0.00 42.79 3.16
1945 2008 3.506067 TGCAGTCGACTCTGATAAGAACA 59.494 43.478 16.96 0.00 37.61 3.18
1952 2015 0.814457 GAGGTGCAGTCGACTCTGAT 59.186 55.000 16.96 0.35 37.61 2.90
1954 2017 0.529833 ATGAGGTGCAGTCGACTCTG 59.470 55.000 16.96 7.87 38.35 3.35
1955 2018 1.746220 GTATGAGGTGCAGTCGACTCT 59.254 52.381 16.96 9.88 0.00 3.24
1973 2405 1.539388 CAATGTCCCTTGCGCAAAGTA 59.461 47.619 25.01 9.06 33.66 2.24
1974 2406 0.314935 CAATGTCCCTTGCGCAAAGT 59.685 50.000 25.01 4.95 33.66 2.66
1995 2427 2.283298 TGATCTTTGGCGCTCAGATTC 58.717 47.619 7.64 6.87 0.00 2.52
2001 2433 1.442769 TGTTCTGATCTTTGGCGCTC 58.557 50.000 7.64 0.00 0.00 5.03
2012 2444 0.324614 TGGTGTGCGGATGTTCTGAT 59.675 50.000 0.00 0.00 0.00 2.90
2034 2474 6.093617 TGAGGGAAGGAAACTAGAGAGTAT 57.906 41.667 0.00 0.00 42.68 2.12
2067 2507 5.241728 GCACATGGAAACTAGAGAGGTTTTT 59.758 40.000 0.00 0.00 37.07 1.94
2068 2508 4.762251 GCACATGGAAACTAGAGAGGTTTT 59.238 41.667 0.00 0.00 37.07 2.43
2069 2509 4.202461 TGCACATGGAAACTAGAGAGGTTT 60.202 41.667 0.00 0.00 39.25 3.27
2070 2510 3.327757 TGCACATGGAAACTAGAGAGGTT 59.672 43.478 0.00 0.00 34.34 3.50
2071 2511 2.906389 TGCACATGGAAACTAGAGAGGT 59.094 45.455 0.00 0.00 0.00 3.85
2072 2512 3.616956 TGCACATGGAAACTAGAGAGG 57.383 47.619 0.00 0.00 0.00 3.69
2073 2513 5.181009 TCATTGCACATGGAAACTAGAGAG 58.819 41.667 0.00 0.00 0.00 3.20
2074 2514 5.164620 TCATTGCACATGGAAACTAGAGA 57.835 39.130 0.00 0.00 0.00 3.10
2075 2515 5.885230 TTCATTGCACATGGAAACTAGAG 57.115 39.130 0.00 0.00 0.00 2.43
2076 2516 6.839124 ATTTCATTGCACATGGAAACTAGA 57.161 33.333 0.00 0.00 32.65 2.43
2077 2517 7.894376 AAATTTCATTGCACATGGAAACTAG 57.106 32.000 0.00 0.00 32.65 2.57
2078 2518 8.149647 AGAAAATTTCATTGCACATGGAAACTA 58.850 29.630 8.55 0.00 32.65 2.24
2079 2519 6.993902 AGAAAATTTCATTGCACATGGAAACT 59.006 30.769 8.55 3.43 32.65 2.66
2080 2520 7.193377 AGAAAATTTCATTGCACATGGAAAC 57.807 32.000 8.55 1.85 32.65 2.78
2081 2521 7.804843 AAGAAAATTTCATTGCACATGGAAA 57.195 28.000 8.55 5.54 34.17 3.13
2082 2522 7.804843 AAAGAAAATTTCATTGCACATGGAA 57.195 28.000 8.55 5.43 0.00 3.53
2083 2523 7.804843 AAAAGAAAATTTCATTGCACATGGA 57.195 28.000 8.55 0.00 0.00 3.41
2084 2524 8.129840 TGAAAAAGAAAATTTCATTGCACATGG 58.870 29.630 8.55 0.00 40.75 3.66
2095 2535 8.982685 GTCTTCAGGGATGAAAAAGAAAATTTC 58.017 33.333 0.00 0.00 37.31 2.17
2096 2536 8.485392 TGTCTTCAGGGATGAAAAAGAAAATTT 58.515 29.630 0.00 0.00 0.00 1.82
2097 2537 8.021898 TGTCTTCAGGGATGAAAAAGAAAATT 57.978 30.769 0.00 0.00 0.00 1.82
2098 2538 7.601705 TGTCTTCAGGGATGAAAAAGAAAAT 57.398 32.000 0.00 0.00 0.00 1.82
2099 2539 6.461509 GCTGTCTTCAGGGATGAAAAAGAAAA 60.462 38.462 0.00 0.00 41.57 2.29
2100 2540 5.010012 GCTGTCTTCAGGGATGAAAAAGAAA 59.990 40.000 0.00 0.00 41.57 2.52
2101 2541 4.520492 GCTGTCTTCAGGGATGAAAAAGAA 59.480 41.667 0.00 0.00 41.57 2.52
2102 2542 4.074970 GCTGTCTTCAGGGATGAAAAAGA 58.925 43.478 0.00 0.00 41.57 2.52
2116 2556 0.173708 CTACGACTGGGGCTGTCTTC 59.826 60.000 0.00 0.00 31.62 2.87
2122 2562 1.472188 GTAAGTCTACGACTGGGGCT 58.528 55.000 0.00 0.00 42.59 5.19
2141 2581 3.789756 GCATCTTTTGATCATGACTTGCG 59.210 43.478 0.00 0.00 36.97 4.85
2142 2582 4.740268 TGCATCTTTTGATCATGACTTGC 58.260 39.130 0.00 4.95 36.97 4.01
2143 2583 6.560711 TGATGCATCTTTTGATCATGACTTG 58.439 36.000 26.32 0.00 36.97 3.16
2175 2615 8.034215 CACACCTTTGGATTTTATGATGCTTAA 58.966 33.333 0.00 0.00 0.00 1.85
2185 2805 4.082463 GGATTCGCACACCTTTGGATTTTA 60.082 41.667 0.00 0.00 0.00 1.52
2190 2810 0.109532 TGGATTCGCACACCTTTGGA 59.890 50.000 0.00 0.00 0.00 3.53
2191 2811 0.240945 GTGGATTCGCACACCTTTGG 59.759 55.000 0.00 0.00 0.00 3.28
2209 2829 3.809013 CATTGGGGGCTAGCGGGT 61.809 66.667 9.00 0.00 0.00 5.28
2213 2833 0.106719 TACTTGCATTGGGGGCTAGC 60.107 55.000 6.04 6.04 37.58 3.42
2215 2835 3.030291 CAAATACTTGCATTGGGGGCTA 58.970 45.455 0.00 0.00 0.00 3.93
2216 2836 1.832998 CAAATACTTGCATTGGGGGCT 59.167 47.619 0.00 0.00 0.00 5.19
2217 2837 1.134431 CCAAATACTTGCATTGGGGGC 60.134 52.381 7.96 0.00 39.92 5.80
2218 2838 2.431782 CTCCAAATACTTGCATTGGGGG 59.568 50.000 14.49 0.00 43.05 5.40
2219 2839 3.364549 TCTCCAAATACTTGCATTGGGG 58.635 45.455 14.49 12.01 44.48 4.96
2220 2840 3.382546 CCTCTCCAAATACTTGCATTGGG 59.617 47.826 14.49 0.79 43.05 4.12
2221 2841 4.272489 TCCTCTCCAAATACTTGCATTGG 58.728 43.478 9.36 9.36 43.97 3.16
2222 2842 5.678107 GCTTCCTCTCCAAATACTTGCATTG 60.678 44.000 0.00 0.00 0.00 2.82
2223 2843 4.400567 GCTTCCTCTCCAAATACTTGCATT 59.599 41.667 0.00 0.00 0.00 3.56
2224 2844 3.950395 GCTTCCTCTCCAAATACTTGCAT 59.050 43.478 0.00 0.00 0.00 3.96
2225 2845 3.244875 TGCTTCCTCTCCAAATACTTGCA 60.245 43.478 0.00 0.00 0.00 4.08
2226 2846 3.347216 TGCTTCCTCTCCAAATACTTGC 58.653 45.455 0.00 0.00 0.00 4.01
2227 2847 5.964958 TTTGCTTCCTCTCCAAATACTTG 57.035 39.130 0.00 0.00 0.00 3.16
2228 2848 6.323739 TGTTTTTGCTTCCTCTCCAAATACTT 59.676 34.615 0.00 0.00 34.06 2.24
2229 2849 5.833131 TGTTTTTGCTTCCTCTCCAAATACT 59.167 36.000 0.00 0.00 34.06 2.12
2230 2850 6.084326 TGTTTTTGCTTCCTCTCCAAATAC 57.916 37.500 0.00 0.00 33.76 1.89
2231 2851 6.916360 ATGTTTTTGCTTCCTCTCCAAATA 57.084 33.333 0.00 0.00 0.00 1.40
2232 2852 5.813513 ATGTTTTTGCTTCCTCTCCAAAT 57.186 34.783 0.00 0.00 0.00 2.32
2233 2853 6.323739 AGTTATGTTTTTGCTTCCTCTCCAAA 59.676 34.615 0.00 0.00 0.00 3.28
2234 2854 5.833131 AGTTATGTTTTTGCTTCCTCTCCAA 59.167 36.000 0.00 0.00 0.00 3.53
2235 2855 5.385198 AGTTATGTTTTTGCTTCCTCTCCA 58.615 37.500 0.00 0.00 0.00 3.86
2236 2856 5.966742 AGTTATGTTTTTGCTTCCTCTCC 57.033 39.130 0.00 0.00 0.00 3.71
2237 2857 6.403746 GGCTAGTTATGTTTTTGCTTCCTCTC 60.404 42.308 0.00 0.00 0.00 3.20
2257 3118 2.468831 GATTCTTGCTCTCACGGCTAG 58.531 52.381 0.00 0.00 34.77 3.42
2263 3124 2.092753 TCATGGGGATTCTTGCTCTCAC 60.093 50.000 0.00 0.00 0.00 3.51
2283 3144 7.095229 GGTGAATGTAAGCTTTTCCCAATTTTC 60.095 37.037 3.20 0.00 0.00 2.29
2284 3145 6.710295 GGTGAATGTAAGCTTTTCCCAATTTT 59.290 34.615 3.20 0.00 0.00 1.82
2285 3146 6.230472 GGTGAATGTAAGCTTTTCCCAATTT 58.770 36.000 3.20 0.00 0.00 1.82
2286 3147 5.279960 GGGTGAATGTAAGCTTTTCCCAATT 60.280 40.000 3.20 0.00 32.32 2.32
2287 3148 4.222810 GGGTGAATGTAAGCTTTTCCCAAT 59.777 41.667 3.20 0.00 32.32 3.16
2303 3164 1.141019 CGTGATCGGTCGGGTGAAT 59.859 57.895 0.00 0.00 0.00 2.57
2339 3200 3.054875 CAGATGATCCAACAGACAGGGAA 60.055 47.826 0.00 0.00 33.73 3.97
2357 3218 0.179100 CGTCCAGCCGATCAACAGAT 60.179 55.000 0.00 0.00 0.00 2.90
2408 3269 6.578944 ACAAGGGTTCTGTTTCATAAAAACC 58.421 36.000 0.00 0.00 0.00 3.27
2425 3287 3.593442 TGATGGTTCTGAAACAAGGGT 57.407 42.857 12.76 0.00 37.10 4.34
2466 3370 3.148279 GTCGCCCTCCCAGTCGAT 61.148 66.667 0.00 0.00 33.37 3.59
2592 3528 4.752594 CGGGGGAAAGGGAGGGGA 62.753 72.222 0.00 0.00 0.00 4.81
2604 3548 2.158755 AGAATCACTAGAAATGCGGGGG 60.159 50.000 0.00 0.00 0.00 5.40
2619 3564 3.684305 CGCAATGAACACCTACAGAATCA 59.316 43.478 0.00 0.00 0.00 2.57
2660 3605 2.894126 GTCATCTCGGTGGTATGGATCT 59.106 50.000 0.00 0.00 0.00 2.75
2791 3772 2.495155 TGCATGACATTACCAGTGCT 57.505 45.000 0.00 0.00 33.95 4.40
2847 3829 2.009774 ACAATGAGCTCCGGAAATTCG 58.990 47.619 12.15 0.00 0.00 3.34
2853 3835 0.035439 GGGAAACAATGAGCTCCGGA 60.035 55.000 12.15 2.93 0.00 5.14
2854 3836 0.035056 AGGGAAACAATGAGCTCCGG 60.035 55.000 12.15 0.00 0.00 5.14
2855 3837 2.555199 CTAGGGAAACAATGAGCTCCG 58.445 52.381 12.15 2.04 0.00 4.63
2856 3838 2.505819 TCCTAGGGAAACAATGAGCTCC 59.494 50.000 12.15 0.00 0.00 4.70
2857 3839 3.914426 TCCTAGGGAAACAATGAGCTC 57.086 47.619 9.46 6.82 0.00 4.09
2858 3840 4.476479 AGAATCCTAGGGAAACAATGAGCT 59.524 41.667 9.46 0.00 34.34 4.09
2859 3841 4.786425 AGAATCCTAGGGAAACAATGAGC 58.214 43.478 9.46 0.00 34.34 4.26
2860 3842 6.245890 AGAGAATCCTAGGGAAACAATGAG 57.754 41.667 9.46 0.00 34.34 2.90
2861 3843 7.568738 TCATAGAGAATCCTAGGGAAACAATGA 59.431 37.037 9.46 7.97 34.34 2.57
2862 3844 7.739825 TCATAGAGAATCCTAGGGAAACAATG 58.260 38.462 9.46 5.81 34.34 2.82
2863 3845 7.937700 TCATAGAGAATCCTAGGGAAACAAT 57.062 36.000 9.46 0.00 34.34 2.71
2864 3846 7.937700 ATCATAGAGAATCCTAGGGAAACAA 57.062 36.000 9.46 0.00 34.34 2.83
2865 3847 7.937700 AATCATAGAGAATCCTAGGGAAACA 57.062 36.000 9.46 0.00 34.34 2.83
2866 3848 9.278978 GAAAATCATAGAGAATCCTAGGGAAAC 57.721 37.037 9.46 0.00 34.34 2.78
2867 3849 9.230477 AGAAAATCATAGAGAATCCTAGGGAAA 57.770 33.333 9.46 0.00 34.34 3.13
2868 3850 8.805145 AGAAAATCATAGAGAATCCTAGGGAA 57.195 34.615 9.46 0.00 34.34 3.97
2869 3851 8.238060 AGAGAAAATCATAGAGAATCCTAGGGA 58.762 37.037 9.46 0.00 33.66 4.20
2870 3852 8.313292 CAGAGAAAATCATAGAGAATCCTAGGG 58.687 40.741 9.46 0.00 33.66 3.53
2871 3853 9.087871 TCAGAGAAAATCATAGAGAATCCTAGG 57.912 37.037 0.82 0.82 33.66 3.02
2874 3856 7.933033 GCTTCAGAGAAAATCATAGAGAATCCT 59.067 37.037 0.00 0.00 33.66 3.24
2875 3857 7.933033 AGCTTCAGAGAAAATCATAGAGAATCC 59.067 37.037 0.00 0.00 33.66 3.01
2876 3858 8.891671 AGCTTCAGAGAAAATCATAGAGAATC 57.108 34.615 0.00 0.00 0.00 2.52
2877 3859 8.484575 TGAGCTTCAGAGAAAATCATAGAGAAT 58.515 33.333 0.00 0.00 0.00 2.40
2878 3860 7.845037 TGAGCTTCAGAGAAAATCATAGAGAA 58.155 34.615 0.00 0.00 0.00 2.87
2879 3861 7.415592 TGAGCTTCAGAGAAAATCATAGAGA 57.584 36.000 0.00 0.00 0.00 3.10
2880 3862 9.414295 CTATGAGCTTCAGAGAAAATCATAGAG 57.586 37.037 21.74 9.76 43.84 2.43
2881 3863 8.922237 ACTATGAGCTTCAGAGAAAATCATAGA 58.078 33.333 27.00 9.68 43.84 1.98
2882 3864 9.545105 AACTATGAGCTTCAGAGAAAATCATAG 57.455 33.333 23.05 23.05 45.35 2.23
2883 3865 9.896645 AAACTATGAGCTTCAGAGAAAATCATA 57.103 29.630 12.69 10.57 37.91 2.15
2884 3866 8.804912 AAACTATGAGCTTCAGAGAAAATCAT 57.195 30.769 12.69 9.75 37.91 2.45
2885 3867 8.099537 AGAAACTATGAGCTTCAGAGAAAATCA 58.900 33.333 12.69 0.00 37.91 2.57
2886 3868 8.491331 AGAAACTATGAGCTTCAGAGAAAATC 57.509 34.615 12.69 6.73 37.91 2.17
2887 3869 8.320617 AGAGAAACTATGAGCTTCAGAGAAAAT 58.679 33.333 12.69 0.17 37.91 1.82
2888 3870 7.675062 AGAGAAACTATGAGCTTCAGAGAAAA 58.325 34.615 12.69 0.00 37.91 2.29
2889 3871 7.238486 AGAGAAACTATGAGCTTCAGAGAAA 57.762 36.000 12.69 0.00 37.91 2.52
2890 3872 6.849085 AGAGAAACTATGAGCTTCAGAGAA 57.151 37.500 12.69 0.00 37.91 2.87
2891 3873 6.545666 CCTAGAGAAACTATGAGCTTCAGAGA 59.454 42.308 12.69 0.00 37.91 3.10
2892 3874 6.545666 TCCTAGAGAAACTATGAGCTTCAGAG 59.454 42.308 6.34 6.34 41.22 3.35
2911 3893 5.966935 AGAGAAAATCACAGGGAATCCTAGA 59.033 40.000 0.00 0.00 42.67 2.43
3006 3989 5.470098 GCAGAAATCTACTGAAACAAGACCA 59.530 40.000 0.00 0.00 37.54 4.02
3101 4095 6.873076 TGTTGCAGAAATCTTTTGAAACAAGT 59.127 30.769 1.93 0.00 0.00 3.16
3183 4186 3.857157 ACTGAAGCAAGACCCTTGTTA 57.143 42.857 8.29 0.00 0.00 2.41
3197 4200 4.331168 GCAACTCAGGCTATGTTACTGAAG 59.669 45.833 4.37 0.00 40.39 3.02
3213 4216 1.666553 CCTACGGCGTTGCAACTCA 60.667 57.895 26.09 3.07 0.00 3.41
3228 4231 2.438254 TAACGTCGGGCGCTCCTA 60.438 61.111 7.64 0.00 46.11 2.94
3250 4264 2.362077 GTTGCAATGTTTGACCACTCCT 59.638 45.455 0.59 0.00 0.00 3.69
3251 4265 2.100584 TGTTGCAATGTTTGACCACTCC 59.899 45.455 0.59 0.00 0.00 3.85
3293 4308 1.028905 TTTTCCTGCAACCGGAACTG 58.971 50.000 9.46 3.14 40.09 3.16
3296 4311 0.748729 ACGTTTTCCTGCAACCGGAA 60.749 50.000 9.46 1.89 38.71 4.30
3337 4509 4.202357 TGTCTGTCATCCTAACACAGCTTT 60.202 41.667 0.00 0.00 37.95 3.51
3420 4594 0.100682 CGTCGGATCTGACCATCGTT 59.899 55.000 25.58 0.00 35.40 3.85
3463 4637 2.672996 ATCCGCCGCAAAGTGCTT 60.673 55.556 0.00 0.00 42.25 3.91
3467 4641 1.579429 GAAACATCCGCCGCAAAGT 59.421 52.632 0.00 0.00 0.00 2.66
3470 4644 1.247419 ATTGGAAACATCCGCCGCAA 61.247 50.000 0.00 0.00 42.32 4.85
3508 4682 0.823356 ATTTTCATGGGCGCCGCTAT 60.823 50.000 22.54 12.12 0.00 2.97
3522 4696 7.550712 AGATTCAAGATGCTACCCAAATTTTC 58.449 34.615 0.00 0.00 0.00 2.29
3542 4716 1.066143 TGGTGCGGAAGGAGAAGATTC 60.066 52.381 0.00 0.00 0.00 2.52
3550 4724 0.610785 GGGAAAATGGTGCGGAAGGA 60.611 55.000 0.00 0.00 0.00 3.36
3556 4730 1.288752 GTGGTGGGAAAATGGTGCG 59.711 57.895 0.00 0.00 0.00 5.34
3564 4738 7.604657 ACTATTTTGTATTTGTGGTGGGAAA 57.395 32.000 0.00 0.00 0.00 3.13
3592 4767 4.849883 AGAATACGTGTGAGATGATCGTC 58.150 43.478 6.84 6.84 36.24 4.20
3604 4779 2.154567 TGGGCCTCTAGAATACGTGT 57.845 50.000 4.53 0.00 0.00 4.49
3615 4790 1.207791 CAAGACTACCATGGGCCTCT 58.792 55.000 18.09 9.02 0.00 3.69
3641 4826 6.414732 TGTTATGGAATTCCTCCTACACTTG 58.585 40.000 24.73 0.00 45.64 3.16
3678 4863 4.095334 TGATGGAGCTTGTGAAATTGATCG 59.905 41.667 0.00 0.00 0.00 3.69
3685 4870 7.894708 TGAAATTATTGATGGAGCTTGTGAAA 58.105 30.769 0.00 0.00 0.00 2.69
3751 4936 5.767816 ATGTAAAGTGCGGAAAGAAACTT 57.232 34.783 0.00 0.00 34.40 2.66
3759 4944 6.401688 CGTCATTCTAAATGTAAAGTGCGGAA 60.402 38.462 0.04 0.00 0.00 4.30
3761 4946 5.255596 CGTCATTCTAAATGTAAAGTGCGG 58.744 41.667 0.04 0.00 0.00 5.69
3770 4955 6.090898 GTGACACTTAGCGTCATTCTAAATGT 59.909 38.462 6.36 0.00 44.70 2.71
3772 4957 6.398918 AGTGACACTTAGCGTCATTCTAAAT 58.601 36.000 6.36 0.00 44.70 1.40
3773 4958 5.779922 AGTGACACTTAGCGTCATTCTAAA 58.220 37.500 6.36 0.00 44.70 1.85
3776 4961 3.944055 AGTGACACTTAGCGTCATTCT 57.056 42.857 6.36 0.00 44.70 2.40
3777 4962 3.423645 GCAAGTGACACTTAGCGTCATTC 60.424 47.826 20.17 0.00 44.70 2.67
3778 4963 2.480419 GCAAGTGACACTTAGCGTCATT 59.520 45.455 20.17 0.00 44.70 2.57
3779 4964 2.069273 GCAAGTGACACTTAGCGTCAT 58.931 47.619 20.17 0.00 44.70 3.06
3788 4981 2.816087 CAAATGGCTAGCAAGTGACACT 59.184 45.455 18.24 1.07 0.00 3.55
3797 4990 3.814842 CGGAACATATCAAATGGCTAGCA 59.185 43.478 18.24 2.97 0.00 3.49
3799 4992 7.010552 GCTATACGGAACATATCAAATGGCTAG 59.989 40.741 0.00 0.00 0.00 3.42
3800 4993 6.816640 GCTATACGGAACATATCAAATGGCTA 59.183 38.462 0.00 0.00 0.00 3.93
3805 4998 7.921214 CGATAGGCTATACGGAACATATCAAAT 59.079 37.037 7.08 0.00 0.00 2.32
3827 5020 3.814842 GTCCATGTTGCAATGATCCGATA 59.185 43.478 0.59 0.00 0.00 2.92
3828 5021 2.620115 GTCCATGTTGCAATGATCCGAT 59.380 45.455 0.59 0.00 0.00 4.18
3830 5023 1.066002 GGTCCATGTTGCAATGATCCG 59.934 52.381 0.59 0.00 0.00 4.18
3832 5025 3.713288 CATGGTCCATGTTGCAATGATC 58.287 45.455 21.98 0.00 37.12 2.92
3855 5048 3.550275 CCATGTTACAATAGACGACCGTG 59.450 47.826 0.00 0.00 0.00 4.94
3856 5049 3.444742 TCCATGTTACAATAGACGACCGT 59.555 43.478 0.00 0.00 0.00 4.83
3862 5055 4.501071 ACGTGGTCCATGTTACAATAGAC 58.499 43.478 11.20 0.00 28.11 2.59
3863 5056 4.811969 ACGTGGTCCATGTTACAATAGA 57.188 40.909 11.20 0.00 28.11 1.98
3864 5057 4.693566 ACAACGTGGTCCATGTTACAATAG 59.306 41.667 25.72 16.04 40.99 1.73
3865 5058 4.452795 CACAACGTGGTCCATGTTACAATA 59.547 41.667 25.72 0.00 40.99 1.90
3866 5059 3.252215 CACAACGTGGTCCATGTTACAAT 59.748 43.478 25.72 11.47 40.99 2.71
3867 5060 2.614520 CACAACGTGGTCCATGTTACAA 59.385 45.455 25.72 0.00 40.99 2.41
3868 5061 2.158943 TCACAACGTGGTCCATGTTACA 60.159 45.455 25.72 12.02 40.99 2.41
3869 5062 2.485903 TCACAACGTGGTCCATGTTAC 58.514 47.619 25.72 0.00 40.99 2.50
3870 5063 2.912690 TCACAACGTGGTCCATGTTA 57.087 45.000 25.72 10.88 40.99 2.41
3871 5064 2.151202 GATCACAACGTGGTCCATGTT 58.849 47.619 21.69 21.69 43.30 2.71
3872 5065 1.071542 TGATCACAACGTGGTCCATGT 59.928 47.619 11.20 11.20 42.42 3.21
3873 5066 1.807139 TGATCACAACGTGGTCCATG 58.193 50.000 9.71 9.71 42.42 3.66
3874 5067 2.237143 AGATGATCACAACGTGGTCCAT 59.763 45.455 0.00 0.00 42.42 3.41
3875 5068 1.623311 AGATGATCACAACGTGGTCCA 59.377 47.619 0.00 0.00 42.42 4.02
3876 5069 2.271800 GAGATGATCACAACGTGGTCC 58.728 52.381 0.00 0.00 42.42 4.46
3877 5070 2.271800 GGAGATGATCACAACGTGGTC 58.728 52.381 0.00 0.32 43.29 4.02
3878 5071 1.623311 TGGAGATGATCACAACGTGGT 59.377 47.619 0.00 0.00 33.87 4.16
3879 5072 2.274437 CTGGAGATGATCACAACGTGG 58.726 52.381 0.00 0.00 33.87 4.94
3880 5073 1.662629 GCTGGAGATGATCACAACGTG 59.337 52.381 0.00 0.00 34.45 4.49
3881 5074 1.276138 TGCTGGAGATGATCACAACGT 59.724 47.619 0.00 0.00 0.00 3.99
3882 5075 2.014335 TGCTGGAGATGATCACAACG 57.986 50.000 0.00 0.00 0.00 4.10
3883 5076 2.617308 CCATGCTGGAGATGATCACAAC 59.383 50.000 0.00 0.00 40.96 3.32
3884 5077 2.506644 TCCATGCTGGAGATGATCACAA 59.493 45.455 0.00 0.00 42.67 3.33
3885 5078 2.121129 TCCATGCTGGAGATGATCACA 58.879 47.619 0.00 0.00 42.67 3.58
3886 5079 2.924757 TCCATGCTGGAGATGATCAC 57.075 50.000 0.00 0.00 42.67 3.06
3917 5110 0.106268 ACATGGGTCCAGTTGCAACA 60.106 50.000 30.11 8.22 0.00 3.33
3918 5111 1.039856 AACATGGGTCCAGTTGCAAC 58.960 50.000 22.17 22.17 0.00 4.17
3938 5131 1.126113 CGTGTTGTAATCAGTGACCGC 59.874 52.381 0.00 0.00 0.00 5.68
3941 5134 1.463444 GCCCGTGTTGTAATCAGTGAC 59.537 52.381 0.00 0.00 0.00 3.67
3946 5139 1.271652 ACATGGCCCGTGTTGTAATCA 60.272 47.619 1.74 0.00 28.11 2.57
3947 5140 1.459450 ACATGGCCCGTGTTGTAATC 58.541 50.000 1.74 0.00 28.11 1.75
3961 5154 4.466050 ACCAGAGGTGACCACAACATGG 62.466 54.545 3.63 3.87 44.75 3.66
3969 5162 0.465460 GTGCAAACCAGAGGTGACCA 60.465 55.000 3.63 0.00 35.34 4.02
3982 5175 3.505680 ACCAAAAGCTCATATCGTGCAAA 59.494 39.130 0.00 0.00 36.55 3.68
3988 5181 5.739752 TCAATGACCAAAAGCTCATATCG 57.260 39.130 0.00 0.00 0.00 2.92
3991 5184 5.185442 TGCAATCAATGACCAAAAGCTCATA 59.815 36.000 0.00 0.00 0.00 2.15
3993 5186 3.321396 TGCAATCAATGACCAAAAGCTCA 59.679 39.130 0.00 0.00 0.00 4.26
3997 5190 5.697178 TCATGTTGCAATCAATGACCAAAAG 59.303 36.000 14.77 0.00 34.29 2.27
4043 5266 1.135489 TGTCTACTCGGTCGTCATTGC 60.135 52.381 0.00 0.00 0.00 3.56
4066 5289 4.803426 GGGTGGAGCTGCGACGAG 62.803 72.222 0.00 0.00 0.00 4.18
4083 5306 3.853330 CCGTCACCGATGCTTGCG 61.853 66.667 0.00 0.00 35.63 4.85
4093 5321 2.617274 GCAAGAGGCAACCGTCACC 61.617 63.158 0.00 0.00 43.97 4.02
4116 5344 0.103572 GCATCAATGGCGGCATCTTT 59.896 50.000 25.97 7.81 0.00 2.52
4119 5347 0.520404 CTAGCATCAATGGCGGCATC 59.480 55.000 25.97 12.17 36.08 3.91
4120 5348 0.892358 CCTAGCATCAATGGCGGCAT 60.892 55.000 20.18 20.18 36.08 4.40
4121 5349 1.526686 CCTAGCATCAATGGCGGCA 60.527 57.895 16.34 16.34 36.08 5.69
4122 5350 1.526917 ACCTAGCATCAATGGCGGC 60.527 57.895 0.00 0.00 36.08 6.53
4123 5351 0.464373 ACACCTAGCATCAATGGCGG 60.464 55.000 0.00 0.00 36.08 6.13
4124 5352 1.331756 GAACACCTAGCATCAATGGCG 59.668 52.381 0.00 0.00 36.08 5.69
4125 5353 1.331756 CGAACACCTAGCATCAATGGC 59.668 52.381 0.00 0.00 0.00 4.40
4126 5354 1.331756 GCGAACACCTAGCATCAATGG 59.668 52.381 0.00 0.00 0.00 3.16
4127 5355 1.331756 GGCGAACACCTAGCATCAATG 59.668 52.381 0.00 0.00 0.00 2.82
4128 5356 1.668419 GGCGAACACCTAGCATCAAT 58.332 50.000 0.00 0.00 0.00 2.57
4129 5357 0.739462 CGGCGAACACCTAGCATCAA 60.739 55.000 0.00 0.00 0.00 2.57
4130 5358 1.153647 CGGCGAACACCTAGCATCA 60.154 57.895 0.00 0.00 0.00 3.07
4131 5359 1.153628 ACGGCGAACACCTAGCATC 60.154 57.895 16.62 0.00 0.00 3.91
4132 5360 1.447838 CACGGCGAACACCTAGCAT 60.448 57.895 16.62 0.00 0.00 3.79
4133 5361 2.048597 CACGGCGAACACCTAGCA 60.049 61.111 16.62 0.00 0.00 3.49
4134 5362 3.488090 GCACGGCGAACACCTAGC 61.488 66.667 16.62 0.14 0.00 3.42
4135 5363 1.666553 TTGCACGGCGAACACCTAG 60.667 57.895 16.62 0.00 0.00 3.02
4136 5364 1.957186 GTTGCACGGCGAACACCTA 60.957 57.895 16.62 0.00 0.00 3.08
4137 5365 3.276846 GTTGCACGGCGAACACCT 61.277 61.111 16.62 0.00 0.00 4.00
4138 5366 3.521308 CTGTTGCACGGCGAACACC 62.521 63.158 16.62 3.99 30.91 4.16
4139 5367 1.492319 TACTGTTGCACGGCGAACAC 61.492 55.000 16.62 5.06 30.91 3.32
4140 5368 0.601576 ATACTGTTGCACGGCGAACA 60.602 50.000 16.62 13.36 32.28 3.18
4141 5369 0.179225 CATACTGTTGCACGGCGAAC 60.179 55.000 16.62 8.64 0.00 3.95
4142 5370 1.906994 GCATACTGTTGCACGGCGAA 61.907 55.000 16.62 0.00 42.31 4.70
4143 5371 2.387445 GCATACTGTTGCACGGCGA 61.387 57.895 16.62 0.00 42.31 5.54
4144 5372 2.098298 GCATACTGTTGCACGGCG 59.902 61.111 4.80 4.80 42.31 6.46
4145 5373 2.098298 CGCATACTGTTGCACGGC 59.902 61.111 12.87 0.00 42.91 5.68
4146 5374 1.419922 GTCGCATACTGTTGCACGG 59.580 57.895 12.87 0.00 42.91 4.94
4147 5375 1.057208 CGTCGCATACTGTTGCACG 59.943 57.895 12.87 14.81 42.91 5.34
4148 5376 1.419922 CCGTCGCATACTGTTGCAC 59.580 57.895 12.87 9.65 42.91 4.57
4149 5377 1.739929 CCCGTCGCATACTGTTGCA 60.740 57.895 12.87 0.00 42.91 4.08
4150 5378 3.089784 CCCGTCGCATACTGTTGC 58.910 61.111 5.31 5.31 39.29 4.17
4151 5379 2.461110 GGCCCGTCGCATACTGTTG 61.461 63.158 0.00 0.00 40.31 3.33
4152 5380 2.125269 GGCCCGTCGCATACTGTT 60.125 61.111 0.00 0.00 40.31 3.16
4195 5423 1.269448 GTTGCTTTGGATTCGGCAAGA 59.731 47.619 0.00 0.00 43.76 3.02
4196 5424 1.701704 GTTGCTTTGGATTCGGCAAG 58.298 50.000 0.00 0.00 43.76 4.01
4198 5426 1.578926 CGTTGCTTTGGATTCGGCA 59.421 52.632 0.00 0.00 0.00 5.69
4199 5427 1.154035 CCGTTGCTTTGGATTCGGC 60.154 57.895 0.00 0.00 0.00 5.54
4200 5428 1.094785 ATCCGTTGCTTTGGATTCGG 58.905 50.000 0.00 0.00 42.31 4.30
4201 5429 1.202177 CCATCCGTTGCTTTGGATTCG 60.202 52.381 2.02 0.00 42.31 3.34
4202 5430 2.091541 TCCATCCGTTGCTTTGGATTC 58.908 47.619 2.02 0.00 42.31 2.52
4204 5432 2.442236 ATCCATCCGTTGCTTTGGAT 57.558 45.000 0.00 0.00 45.84 3.41
4205 5433 1.004161 TGATCCATCCGTTGCTTTGGA 59.996 47.619 0.00 0.00 42.18 3.53
4206 5434 1.462616 TGATCCATCCGTTGCTTTGG 58.537 50.000 0.00 0.00 0.00 3.28
4207 5435 2.223641 CCATGATCCATCCGTTGCTTTG 60.224 50.000 0.00 0.00 0.00 2.77
4208 5436 2.026641 CCATGATCCATCCGTTGCTTT 58.973 47.619 0.00 0.00 0.00 3.51
4209 5437 1.212688 TCCATGATCCATCCGTTGCTT 59.787 47.619 0.00 0.00 0.00 3.91
4210 5438 0.839277 TCCATGATCCATCCGTTGCT 59.161 50.000 0.00 0.00 0.00 3.91
4211 5439 1.233019 CTCCATGATCCATCCGTTGC 58.767 55.000 0.00 0.00 0.00 4.17
4212 5440 1.544093 CCCTCCATGATCCATCCGTTG 60.544 57.143 0.00 0.00 0.00 4.10
4213 5441 0.767375 CCCTCCATGATCCATCCGTT 59.233 55.000 0.00 0.00 0.00 4.44
4214 5442 0.400525 ACCCTCCATGATCCATCCGT 60.401 55.000 0.00 0.00 0.00 4.69
4215 5443 0.322975 GACCCTCCATGATCCATCCG 59.677 60.000 0.00 0.00 0.00 4.18
4216 5444 1.438469 TGACCCTCCATGATCCATCC 58.562 55.000 0.00 0.00 0.00 3.51
4217 5445 6.760440 ATATATGACCCTCCATGATCCATC 57.240 41.667 0.00 0.00 0.00 3.51
4218 5446 7.185120 TCAAATATATGACCCTCCATGATCCAT 59.815 37.037 0.00 0.00 0.00 3.41
4219 5447 6.504989 TCAAATATATGACCCTCCATGATCCA 59.495 38.462 0.00 0.00 0.00 3.41
4220 5448 6.825721 GTCAAATATATGACCCTCCATGATCC 59.174 42.308 0.00 0.00 43.11 3.36
4221 5449 7.856145 GTCAAATATATGACCCTCCATGATC 57.144 40.000 0.00 0.00 43.11 2.92
4241 5469 5.070180 TGAAATTTCTTTGGCCATCAGTCAA 59.930 36.000 18.64 4.44 0.00 3.18
4297 5525 4.765339 AGAAATTGTTAGGGTGCAGGTAAC 59.235 41.667 0.00 0.00 0.00 2.50
4299 5527 4.650972 AGAAATTGTTAGGGTGCAGGTA 57.349 40.909 0.00 0.00 0.00 3.08
4300 5528 3.525800 AGAAATTGTTAGGGTGCAGGT 57.474 42.857 0.00 0.00 0.00 4.00
4301 5529 3.826157 TGAAGAAATTGTTAGGGTGCAGG 59.174 43.478 0.00 0.00 0.00 4.85
4302 5530 5.452078 TTGAAGAAATTGTTAGGGTGCAG 57.548 39.130 0.00 0.00 0.00 4.41
4303 5531 5.860941 TTTGAAGAAATTGTTAGGGTGCA 57.139 34.783 0.00 0.00 0.00 4.57
4324 5552 5.479027 AGTTTACCACGGGCTGAATATTTTT 59.521 36.000 0.00 0.00 0.00 1.94
4325 5553 5.014202 AGTTTACCACGGGCTGAATATTTT 58.986 37.500 0.00 0.00 0.00 1.82
4326 5554 4.398044 CAGTTTACCACGGGCTGAATATTT 59.602 41.667 0.00 0.00 0.00 1.40
4327 5555 3.945285 CAGTTTACCACGGGCTGAATATT 59.055 43.478 0.00 0.00 0.00 1.28
4328 5556 3.541632 CAGTTTACCACGGGCTGAATAT 58.458 45.455 0.00 0.00 0.00 1.28
4329 5557 2.355310 CCAGTTTACCACGGGCTGAATA 60.355 50.000 0.00 0.00 33.53 1.75
4330 5558 1.613255 CCAGTTTACCACGGGCTGAAT 60.613 52.381 0.00 0.00 33.53 2.57
4331 5559 0.250553 CCAGTTTACCACGGGCTGAA 60.251 55.000 0.00 0.00 33.53 3.02
4332 5560 1.122632 TCCAGTTTACCACGGGCTGA 61.123 55.000 0.00 0.00 40.46 4.26
4333 5561 0.250553 TTCCAGTTTACCACGGGCTG 60.251 55.000 0.00 0.00 40.46 4.85
4334 5562 0.250597 GTTCCAGTTTACCACGGGCT 60.251 55.000 0.00 0.00 40.46 5.19
4335 5563 1.239296 GGTTCCAGTTTACCACGGGC 61.239 60.000 0.00 0.00 40.46 6.13
4336 5564 0.399075 AGGTTCCAGTTTACCACGGG 59.601 55.000 0.00 0.00 41.98 5.28
4337 5565 3.055675 TCATAGGTTCCAGTTTACCACGG 60.056 47.826 0.00 0.00 36.87 4.94
4338 5566 3.930848 GTCATAGGTTCCAGTTTACCACG 59.069 47.826 0.00 0.00 36.87 4.94
4339 5567 4.901868 TGTCATAGGTTCCAGTTTACCAC 58.098 43.478 0.00 0.00 36.87 4.16
4340 5568 4.841813 TCTGTCATAGGTTCCAGTTTACCA 59.158 41.667 0.00 0.00 36.87 3.25
4341 5569 5.416271 TCTGTCATAGGTTCCAGTTTACC 57.584 43.478 0.00 0.00 34.54 2.85
4342 5570 6.465084 AGTTCTGTCATAGGTTCCAGTTTAC 58.535 40.000 0.00 0.00 0.00 2.01
4343 5571 6.497259 AGAGTTCTGTCATAGGTTCCAGTTTA 59.503 38.462 0.00 0.00 0.00 2.01
4344 5572 5.308237 AGAGTTCTGTCATAGGTTCCAGTTT 59.692 40.000 0.00 0.00 0.00 2.66
4345 5573 4.841246 AGAGTTCTGTCATAGGTTCCAGTT 59.159 41.667 0.00 0.00 0.00 3.16
4346 5574 4.221703 CAGAGTTCTGTCATAGGTTCCAGT 59.778 45.833 0.91 0.00 39.09 4.00
4347 5575 4.464244 TCAGAGTTCTGTCATAGGTTCCAG 59.536 45.833 8.85 0.00 44.12 3.86
4348 5576 4.416516 TCAGAGTTCTGTCATAGGTTCCA 58.583 43.478 8.85 0.00 44.12 3.53
4386 5614 7.175990 GGACTTATGAACCAAACATGACCTAAA 59.824 37.037 0.00 0.00 0.00 1.85
4392 5620 7.174253 GTGTTAGGACTTATGAACCAAACATGA 59.826 37.037 0.00 0.00 0.00 3.07
4416 5644 9.927668 AATTTATATGTTGGGACTCAAAAAGTG 57.072 29.630 0.00 0.00 38.74 3.16
4424 5652 8.406297 GGACTTGAAATTTATATGTTGGGACTC 58.594 37.037 0.00 0.00 0.00 3.36
4440 5669 5.965486 AGGGACTTTTTAGGGACTTGAAAT 58.035 37.500 0.00 0.00 34.75 2.17
4442 5671 6.504279 AGATAGGGACTTTTTAGGGACTTGAA 59.496 38.462 0.00 0.00 39.49 2.69
4465 5694 6.843752 TGTTAAGTCCAAGGAACCAAATAGA 58.156 36.000 0.00 0.00 0.00 1.98
4466 5695 7.393234 TCATGTTAAGTCCAAGGAACCAAATAG 59.607 37.037 0.00 0.00 0.00 1.73
4468 5697 6.074648 TCATGTTAAGTCCAAGGAACCAAAT 58.925 36.000 0.00 0.00 0.00 2.32
4510 5739 8.734763 AGACTATCAAGGAGGGACTTATAGTTA 58.265 37.037 0.00 0.00 41.55 2.24
4549 5778 6.208840 AGGGACTTAAAGTGGGTATTTGAA 57.791 37.500 0.00 0.00 27.25 2.69
4579 5808 2.990284 TCCATCTAAACCAAACAGGGGA 59.010 45.455 0.00 0.00 43.89 4.81
4582 5811 7.703058 ATAAGTTCCATCTAAACCAAACAGG 57.297 36.000 0.00 0.00 45.67 4.00
4615 5845 7.670979 GGGACTTATTGGTTTAGGGACTTAAAA 59.329 37.037 0.00 0.00 41.75 1.52
4628 5858 6.155393 TGTTTGTTTTCAGGGACTTATTGGTT 59.845 34.615 0.00 0.00 34.60 3.67
4743 5975 2.075355 AATGTTCCCCACCGCTGGAA 62.075 55.000 0.00 0.00 40.55 3.53
4748 5980 2.046285 CCTGAATGTTCCCCACCGC 61.046 63.158 0.00 0.00 0.00 5.68
4752 5984 1.381867 ACCATCCTGAATGTTCCCCA 58.618 50.000 0.00 0.00 33.13 4.96
4757 5989 1.895131 GGCACAACCATCCTGAATGTT 59.105 47.619 0.00 0.00 38.86 2.71
4759 5991 1.548081 TGGCACAACCATCCTGAATG 58.452 50.000 0.00 0.00 46.36 2.67
4787 6025 4.084537 GCGAAATCCATAACCACATCGTAG 60.085 45.833 0.00 0.00 0.00 3.51
4847 6183 1.145759 CCAGCGCGATGTATGTCGTT 61.146 55.000 24.15 0.00 43.27 3.85
4993 6528 4.530857 CCTTCAGGTAGGGCGCCG 62.531 72.222 22.54 5.20 0.00 6.46
4994 6529 4.858680 GCCTTCAGGTAGGGCGCC 62.859 72.222 21.18 21.18 36.37 6.53
5199 6744 0.727398 GAATACAGTGCCGAGGTTGC 59.273 55.000 0.00 0.00 0.00 4.17
5213 6758 6.481954 AAATTGACACTTCTGACGGAATAC 57.518 37.500 0.00 0.00 33.01 1.89
5226 6771 4.215613 GGAACGGCTAAGAAAATTGACACT 59.784 41.667 0.00 0.00 0.00 3.55
5497 7065 4.452733 CCCACTCGAACGGGCCTC 62.453 72.222 0.84 0.00 35.09 4.70
5529 7101 2.401766 CGTTGCTTGCTGGGCCTAG 61.402 63.158 12.68 12.68 0.00 3.02
5566 7138 4.331168 CGAGAGGGTGTTCTTGATTCATTC 59.669 45.833 0.00 0.00 31.34 2.67
5567 7139 4.256920 CGAGAGGGTGTTCTTGATTCATT 58.743 43.478 0.00 0.00 31.34 2.57
5568 7140 3.866651 CGAGAGGGTGTTCTTGATTCAT 58.133 45.455 0.00 0.00 31.34 2.57
5668 7262 1.375396 CGTGATCAGCCCGAACCAA 60.375 57.895 0.00 0.00 0.00 3.67
6143 8108 1.070601 CATATGGCTCGATCACCACCA 59.929 52.381 4.27 0.00 39.19 4.17
6217 8182 5.162936 ACAGGTCTAGGACATCATGGATCTA 60.163 44.000 0.00 0.00 33.68 1.98
6219 8184 3.900601 ACAGGTCTAGGACATCATGGATC 59.099 47.826 0.00 0.00 33.68 3.36
6497 8666 0.456628 GTACAGAGCGGAAGGAGGAC 59.543 60.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.