Multiple sequence alignment - TraesCS1A01G263500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G263500 chr1A 100.000 2543 0 0 1 2543 458917077 458919619 0.000000e+00 4697.0
1 TraesCS1A01G263500 chr1A 91.365 359 29 2 1 358 536616649 536617006 8.180000e-135 490.0
2 TraesCS1A01G263500 chr1B 90.135 1034 60 16 763 1784 480976679 480977682 0.000000e+00 1306.0
3 TraesCS1A01G263500 chr1B 89.051 411 42 3 356 766 625764470 625764063 8.120000e-140 507.0
4 TraesCS1A01G263500 chr1B 87.711 415 45 4 356 768 56472745 56473155 1.770000e-131 479.0
5 TraesCS1A01G263500 chr1B 87.229 415 49 4 355 768 149525353 149525764 1.070000e-128 470.0
6 TraesCS1A01G263500 chr1D 93.713 843 33 7 1083 1925 358217735 358216913 0.000000e+00 1245.0
7 TraesCS1A01G263500 chr1D 95.669 254 11 0 871 1124 358217986 358217733 2.350000e-110 409.0
8 TraesCS1A01G263500 chr1D 94.737 114 6 0 772 885 358218115 358218002 7.230000e-41 178.0
9 TraesCS1A01G263500 chrUn 97.036 641 5 1 1917 2543 382216117 382215477 0.000000e+00 1066.0
10 TraesCS1A01G263500 chrUn 97.036 641 5 1 1917 2543 382217864 382217224 0.000000e+00 1066.0
11 TraesCS1A01G263500 chrUn 91.389 360 25 3 1 357 82489466 82489822 2.940000e-134 488.0
12 TraesCS1A01G263500 chr3B 97.415 619 16 0 1925 2543 532196609 532197227 0.000000e+00 1055.0
13 TraesCS1A01G263500 chr5B 97.111 623 18 0 1921 2543 480303697 480304319 0.000000e+00 1051.0
14 TraesCS1A01G263500 chr5B 91.086 359 28 2 1 358 560390572 560390217 1.370000e-132 483.0
15 TraesCS1A01G263500 chr3A 96.931 619 19 0 1925 2543 35856432 35855814 0.000000e+00 1038.0
16 TraesCS1A01G263500 chr3A 83.908 87 10 3 1840 1923 559061841 559061756 2.100000e-11 80.5
17 TraesCS1A01G263500 chr3A 94.444 36 2 0 1832 1867 648499726 648499691 3.530000e-04 56.5
18 TraesCS1A01G263500 chr7B 95.974 621 23 2 1925 2543 520121728 520121108 0.000000e+00 1007.0
19 TraesCS1A01G263500 chr7B 100.000 29 0 0 1831 1859 336723844 336723872 1.000000e-03 54.7
20 TraesCS1A01G263500 chr4A 93.881 621 36 1 1925 2543 716383846 716383226 0.000000e+00 935.0
21 TraesCS1A01G263500 chr2D 89.474 627 57 5 1924 2543 616444160 616444784 0.000000e+00 784.0
22 TraesCS1A01G263500 chr2D 90.476 42 3 1 1830 1871 143254932 143254972 1.000000e-03 54.7
23 TraesCS1A01G263500 chr2A 89.594 567 53 3 1980 2543 95028909 95029472 0.000000e+00 715.0
24 TraesCS1A01G263500 chr2A 90.289 381 34 2 355 735 698816722 698816345 1.760000e-136 496.0
25 TraesCS1A01G263500 chr6B 84.615 624 58 24 1924 2542 104126936 104126346 1.010000e-163 586.0
26 TraesCS1A01G263500 chr4D 92.271 414 28 3 355 764 386142501 386142914 3.650000e-163 584.0
27 TraesCS1A01G263500 chr5D 93.872 359 18 2 1 358 559113427 559113782 2.880000e-149 538.0
28 TraesCS1A01G263500 chr5D 87.838 74 7 2 1830 1902 357057028 357057100 4.510000e-13 86.1
29 TraesCS1A01G263500 chr6D 90.049 412 38 2 355 764 454176417 454176827 4.820000e-147 531.0
30 TraesCS1A01G263500 chr6D 90.959 365 23 4 1 358 99233640 99233279 1.370000e-132 483.0
31 TraesCS1A01G263500 chr6D 87.952 415 36 7 355 766 108453531 108453128 6.370000e-131 477.0
32 TraesCS1A01G263500 chr7A 88.489 417 44 4 355 768 6659356 6658941 3.780000e-138 501.0
33 TraesCS1A01G263500 chr2B 91.922 359 26 2 1 358 57913969 57914325 1.360000e-137 499.0
34 TraesCS1A01G263500 chr7D 88.136 413 45 4 355 764 561956604 561956193 2.940000e-134 488.0
35 TraesCS1A01G263500 chr7D 91.413 361 22 3 1 358 78290594 78290948 1.060000e-133 486.0
36 TraesCS1A01G263500 chr3D 91.317 357 27 3 1 353 500885630 500885986 3.800000e-133 484.0
37 TraesCS1A01G263500 chr6A 90.859 361 21 8 1 358 515657382 515657031 8.230000e-130 473.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G263500 chr1A 458917077 458919619 2542 False 4697.000000 4697 100.000000 1 2543 1 chr1A.!!$F1 2542
1 TraesCS1A01G263500 chr1B 480976679 480977682 1003 False 1306.000000 1306 90.135000 763 1784 1 chr1B.!!$F3 1021
2 TraesCS1A01G263500 chr1D 358216913 358218115 1202 True 610.666667 1245 94.706333 772 1925 3 chr1D.!!$R1 1153
3 TraesCS1A01G263500 chrUn 382215477 382217864 2387 True 1066.000000 1066 97.036000 1917 2543 2 chrUn.!!$R1 626
4 TraesCS1A01G263500 chr3B 532196609 532197227 618 False 1055.000000 1055 97.415000 1925 2543 1 chr3B.!!$F1 618
5 TraesCS1A01G263500 chr5B 480303697 480304319 622 False 1051.000000 1051 97.111000 1921 2543 1 chr5B.!!$F1 622
6 TraesCS1A01G263500 chr3A 35855814 35856432 618 True 1038.000000 1038 96.931000 1925 2543 1 chr3A.!!$R1 618
7 TraesCS1A01G263500 chr7B 520121108 520121728 620 True 1007.000000 1007 95.974000 1925 2543 1 chr7B.!!$R1 618
8 TraesCS1A01G263500 chr4A 716383226 716383846 620 True 935.000000 935 93.881000 1925 2543 1 chr4A.!!$R1 618
9 TraesCS1A01G263500 chr2D 616444160 616444784 624 False 784.000000 784 89.474000 1924 2543 1 chr2D.!!$F2 619
10 TraesCS1A01G263500 chr2A 95028909 95029472 563 False 715.000000 715 89.594000 1980 2543 1 chr2A.!!$F1 563
11 TraesCS1A01G263500 chr6B 104126346 104126936 590 True 586.000000 586 84.615000 1924 2542 1 chr6B.!!$R1 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.027979 CAGTGGGCGCACAATAATCG 59.972 55.0 32.29 0.0 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1684 1770 0.039346 TTGCACGCACACCAATCATG 60.039 50.0 0.0 0.0 0.0 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.908065 ATTTGGTCATTTTAGCGCGC 58.092 45.000 26.66 26.66 0.00 6.86
21 22 0.453615 TTTGGTCATTTTAGCGCGCG 60.454 50.000 28.44 28.44 0.00 6.86
22 23 1.570347 TTGGTCATTTTAGCGCGCGT 61.570 50.000 32.35 20.00 0.00 6.01
23 24 0.736672 TGGTCATTTTAGCGCGCGTA 60.737 50.000 32.35 18.91 0.00 4.42
24 25 0.370958 GGTCATTTTAGCGCGCGTAA 59.629 50.000 32.35 23.33 0.00 3.18
25 26 1.439803 GTCATTTTAGCGCGCGTAAC 58.560 50.000 32.35 15.19 0.00 2.50
26 27 1.060122 GTCATTTTAGCGCGCGTAACT 59.940 47.619 32.35 21.88 0.00 2.24
27 28 1.322338 TCATTTTAGCGCGCGTAACTC 59.678 47.619 32.35 14.36 0.00 3.01
28 29 0.296642 ATTTTAGCGCGCGTAACTCG 59.703 50.000 32.35 2.81 43.12 4.18
29 30 1.676438 TTTTAGCGCGCGTAACTCGG 61.676 55.000 32.35 0.04 40.26 4.63
36 37 3.484547 GCGTAACTCGGCGGGTTG 61.485 66.667 33.62 19.63 40.26 3.77
37 38 3.484547 CGTAACTCGGCGGGTTGC 61.485 66.667 33.62 30.46 45.38 4.17
38 39 2.047560 GTAACTCGGCGGGTTGCT 60.048 61.111 33.62 11.93 45.43 3.91
39 40 2.098831 GTAACTCGGCGGGTTGCTC 61.099 63.158 33.62 19.53 45.43 4.26
40 41 3.305177 TAACTCGGCGGGTTGCTCC 62.305 63.158 33.62 0.00 45.43 4.70
54 55 2.360350 CTCCAGTGGGCGCACAAT 60.360 61.111 32.29 12.06 0.00 2.71
55 56 1.078497 CTCCAGTGGGCGCACAATA 60.078 57.895 32.29 17.01 0.00 1.90
56 57 0.676466 CTCCAGTGGGCGCACAATAA 60.676 55.000 32.29 15.39 0.00 1.40
57 58 0.034574 TCCAGTGGGCGCACAATAAT 60.035 50.000 32.29 11.49 0.00 1.28
58 59 0.381801 CCAGTGGGCGCACAATAATC 59.618 55.000 32.29 0.00 0.00 1.75
59 60 0.027979 CAGTGGGCGCACAATAATCG 59.972 55.000 32.29 0.00 0.00 3.34
64 65 3.079078 CGCACAATAATCGCGCGC 61.079 61.111 27.95 23.91 42.79 6.86
65 66 3.079078 GCACAATAATCGCGCGCG 61.079 61.111 44.84 44.84 41.35 6.86
66 67 3.079078 CACAATAATCGCGCGCGC 61.079 61.111 45.41 42.65 39.59 6.86
77 78 3.097728 CGCGCGCGGTATAAGGAG 61.098 66.667 43.28 13.53 35.56 3.69
78 79 2.027169 GCGCGCGGTATAAGGAGT 59.973 61.111 33.06 0.00 0.00 3.85
79 80 1.590792 GCGCGCGGTATAAGGAGTT 60.591 57.895 33.06 0.00 0.00 3.01
80 81 1.818221 GCGCGCGGTATAAGGAGTTG 61.818 60.000 33.06 0.00 0.00 3.16
81 82 1.213094 CGCGCGGTATAAGGAGTTGG 61.213 60.000 24.84 0.00 0.00 3.77
82 83 0.878961 GCGCGGTATAAGGAGTTGGG 60.879 60.000 8.83 0.00 0.00 4.12
83 84 0.878961 CGCGGTATAAGGAGTTGGGC 60.879 60.000 0.00 0.00 0.00 5.36
84 85 0.878961 GCGGTATAAGGAGTTGGGCG 60.879 60.000 0.00 0.00 0.00 6.13
85 86 0.878961 CGGTATAAGGAGTTGGGCGC 60.879 60.000 0.00 0.00 0.00 6.53
86 87 0.878961 GGTATAAGGAGTTGGGCGCG 60.879 60.000 0.00 0.00 0.00 6.86
87 88 1.227438 TATAAGGAGTTGGGCGCGC 60.227 57.895 25.94 25.94 0.00 6.86
88 89 2.964438 TATAAGGAGTTGGGCGCGCG 62.964 60.000 28.44 28.44 0.00 6.86
105 106 3.386379 CGGTCGGATTCGCTATCTC 57.614 57.895 0.00 0.00 36.13 2.75
106 107 0.452950 CGGTCGGATTCGCTATCTCG 60.453 60.000 0.00 0.00 36.13 4.04
107 108 0.729816 GGTCGGATTCGCTATCTCGC 60.730 60.000 0.00 0.00 36.13 5.03
115 116 2.330393 GCTATCTCGCGCGGTGTA 59.670 61.111 31.69 17.93 0.00 2.90
116 117 1.081376 GCTATCTCGCGCGGTGTAT 60.081 57.895 31.69 19.28 0.00 2.29
117 118 0.663568 GCTATCTCGCGCGGTGTATT 60.664 55.000 31.69 11.55 0.00 1.89
118 119 1.767289 CTATCTCGCGCGGTGTATTT 58.233 50.000 31.69 10.46 0.00 1.40
119 120 1.452025 CTATCTCGCGCGGTGTATTTG 59.548 52.381 31.69 9.09 0.00 2.32
120 121 1.151777 ATCTCGCGCGGTGTATTTGG 61.152 55.000 31.69 8.84 0.00 3.28
121 122 2.808958 CTCGCGCGGTGTATTTGGG 61.809 63.158 31.69 0.00 0.00 4.12
122 123 3.871574 CGCGCGGTGTATTTGGGG 61.872 66.667 24.84 0.00 0.00 4.96
123 124 4.187810 GCGCGGTGTATTTGGGGC 62.188 66.667 8.83 0.00 0.00 5.80
124 125 3.871574 CGCGGTGTATTTGGGGCG 61.872 66.667 0.00 0.00 37.56 6.13
125 126 4.187810 GCGGTGTATTTGGGGCGC 62.188 66.667 0.00 0.00 0.00 6.53
126 127 3.514362 CGGTGTATTTGGGGCGCC 61.514 66.667 21.18 21.18 0.00 6.53
127 128 3.144871 GGTGTATTTGGGGCGCCC 61.145 66.667 38.57 38.57 45.71 6.13
170 171 4.427661 GCTCGCACCGCACTCTCT 62.428 66.667 0.00 0.00 0.00 3.10
171 172 2.202544 CTCGCACCGCACTCTCTC 60.203 66.667 0.00 0.00 0.00 3.20
172 173 3.691744 CTCGCACCGCACTCTCTCC 62.692 68.421 0.00 0.00 0.00 3.71
173 174 3.753434 CGCACCGCACTCTCTCCT 61.753 66.667 0.00 0.00 0.00 3.69
174 175 2.183046 GCACCGCACTCTCTCCTC 59.817 66.667 0.00 0.00 0.00 3.71
175 176 2.347322 GCACCGCACTCTCTCCTCT 61.347 63.158 0.00 0.00 0.00 3.69
176 177 1.806568 CACCGCACTCTCTCCTCTC 59.193 63.158 0.00 0.00 0.00 3.20
177 178 1.379309 ACCGCACTCTCTCCTCTCC 60.379 63.158 0.00 0.00 0.00 3.71
178 179 2.477176 CCGCACTCTCTCCTCTCCG 61.477 68.421 0.00 0.00 0.00 4.63
179 180 2.804856 GCACTCTCTCCTCTCCGC 59.195 66.667 0.00 0.00 0.00 5.54
180 181 2.781158 GCACTCTCTCCTCTCCGCC 61.781 68.421 0.00 0.00 0.00 6.13
181 182 1.077068 CACTCTCTCCTCTCCGCCT 60.077 63.158 0.00 0.00 0.00 5.52
182 183 1.101049 CACTCTCTCCTCTCCGCCTC 61.101 65.000 0.00 0.00 0.00 4.70
183 184 1.528309 CTCTCTCCTCTCCGCCTCC 60.528 68.421 0.00 0.00 0.00 4.30
184 185 1.994885 CTCTCTCCTCTCCGCCTCCT 61.995 65.000 0.00 0.00 0.00 3.69
185 186 0.694783 TCTCTCCTCTCCGCCTCCTA 60.695 60.000 0.00 0.00 0.00 2.94
186 187 0.536460 CTCTCCTCTCCGCCTCCTAC 60.536 65.000 0.00 0.00 0.00 3.18
187 188 1.894756 CTCCTCTCCGCCTCCTACG 60.895 68.421 0.00 0.00 0.00 3.51
188 189 3.597728 CCTCTCCGCCTCCTACGC 61.598 72.222 0.00 0.00 0.00 4.42
189 190 3.597728 CTCTCCGCCTCCTACGCC 61.598 72.222 0.00 0.00 0.00 5.68
224 225 2.359850 GCGAACTGCACCCATGGA 60.360 61.111 15.22 0.00 45.45 3.41
225 226 2.690778 GCGAACTGCACCCATGGAC 61.691 63.158 15.22 2.53 45.45 4.02
226 227 1.302431 CGAACTGCACCCATGGACA 60.302 57.895 15.22 7.63 0.00 4.02
227 228 1.577328 CGAACTGCACCCATGGACAC 61.577 60.000 15.22 1.71 0.00 3.67
228 229 0.537143 GAACTGCACCCATGGACACA 60.537 55.000 15.22 6.85 0.00 3.72
229 230 0.823356 AACTGCACCCATGGACACAC 60.823 55.000 15.22 0.00 0.00 3.82
230 231 2.281414 TGCACCCATGGACACACG 60.281 61.111 15.22 0.00 0.00 4.49
231 232 3.737172 GCACCCATGGACACACGC 61.737 66.667 15.22 2.21 0.00 5.34
232 233 3.422303 CACCCATGGACACACGCG 61.422 66.667 15.22 3.53 0.00 6.01
254 255 4.489771 CACCCCGCTCACCCCATC 62.490 72.222 0.00 0.00 0.00 3.51
257 258 2.445845 CCCGCTCACCCCATCCTA 60.446 66.667 0.00 0.00 0.00 2.94
258 259 1.843376 CCCGCTCACCCCATCCTAT 60.843 63.158 0.00 0.00 0.00 2.57
259 260 0.544357 CCCGCTCACCCCATCCTATA 60.544 60.000 0.00 0.00 0.00 1.31
260 261 0.898320 CCGCTCACCCCATCCTATAG 59.102 60.000 0.00 0.00 0.00 1.31
261 262 0.247736 CGCTCACCCCATCCTATAGC 59.752 60.000 0.00 0.00 0.00 2.97
262 263 0.615850 GCTCACCCCATCCTATAGCC 59.384 60.000 0.00 0.00 0.00 3.93
263 264 0.898320 CTCACCCCATCCTATAGCCG 59.102 60.000 0.00 0.00 0.00 5.52
264 265 1.192146 TCACCCCATCCTATAGCCGC 61.192 60.000 0.00 0.00 0.00 6.53
265 266 2.283529 ACCCCATCCTATAGCCGCG 61.284 63.158 0.00 0.00 0.00 6.46
266 267 1.982395 CCCCATCCTATAGCCGCGA 60.982 63.158 8.23 0.00 0.00 5.87
267 268 1.215647 CCCATCCTATAGCCGCGAC 59.784 63.158 8.23 0.00 0.00 5.19
268 269 1.215647 CCATCCTATAGCCGCGACC 59.784 63.158 8.23 0.00 0.00 4.79
269 270 1.215647 CATCCTATAGCCGCGACCC 59.784 63.158 8.23 0.00 0.00 4.46
270 271 1.982938 ATCCTATAGCCGCGACCCC 60.983 63.158 8.23 0.00 0.00 4.95
271 272 2.442519 ATCCTATAGCCGCGACCCCT 62.443 60.000 8.23 0.15 0.00 4.79
272 273 2.637383 CCTATAGCCGCGACCCCTC 61.637 68.421 8.23 0.00 0.00 4.30
273 274 2.599578 TATAGCCGCGACCCCTCC 60.600 66.667 8.23 0.00 0.00 4.30
274 275 3.440162 TATAGCCGCGACCCCTCCA 62.440 63.158 8.23 0.00 0.00 3.86
357 358 3.133946 GGAGCTCCTCCGACCATC 58.866 66.667 26.25 0.00 41.08 3.51
358 359 1.456705 GGAGCTCCTCCGACCATCT 60.457 63.158 26.25 0.00 41.08 2.90
359 360 1.045911 GGAGCTCCTCCGACCATCTT 61.046 60.000 26.25 0.00 41.08 2.40
360 361 0.827368 GAGCTCCTCCGACCATCTTT 59.173 55.000 0.87 0.00 0.00 2.52
361 362 0.539051 AGCTCCTCCGACCATCTTTG 59.461 55.000 0.00 0.00 0.00 2.77
363 364 1.195115 CTCCTCCGACCATCTTTGGA 58.805 55.000 0.00 0.00 46.92 3.53
364 365 1.137872 CTCCTCCGACCATCTTTGGAG 59.862 57.143 0.00 0.11 46.92 3.86
365 366 3.768633 CTCCGACCATCTTTGGAGG 57.231 57.895 0.00 2.43 46.92 4.30
366 367 0.462759 CTCCGACCATCTTTGGAGGC 60.463 60.000 0.00 0.00 46.92 4.70
367 368 1.198094 TCCGACCATCTTTGGAGGCA 61.198 55.000 0.00 0.00 46.92 4.75
368 369 0.745845 CCGACCATCTTTGGAGGCAG 60.746 60.000 0.00 0.00 46.92 4.85
369 370 0.250234 CGACCATCTTTGGAGGCAGA 59.750 55.000 0.00 0.00 46.92 4.26
370 371 1.339055 CGACCATCTTTGGAGGCAGAA 60.339 52.381 0.00 0.00 46.92 3.02
371 372 2.363683 GACCATCTTTGGAGGCAGAAG 58.636 52.381 0.00 0.00 46.92 2.85
372 373 1.988107 ACCATCTTTGGAGGCAGAAGA 59.012 47.619 0.00 0.00 46.92 2.87
373 374 2.376518 ACCATCTTTGGAGGCAGAAGAA 59.623 45.455 0.00 0.00 46.92 2.52
374 375 3.011032 ACCATCTTTGGAGGCAGAAGAAT 59.989 43.478 0.00 0.00 46.92 2.40
375 376 3.380637 CCATCTTTGGAGGCAGAAGAATG 59.619 47.826 0.00 0.00 46.92 2.67
376 377 3.077484 TCTTTGGAGGCAGAAGAATGG 57.923 47.619 0.00 0.00 0.00 3.16
377 378 2.376518 TCTTTGGAGGCAGAAGAATGGT 59.623 45.455 0.00 0.00 0.00 3.55
378 379 2.496899 TTGGAGGCAGAAGAATGGTC 57.503 50.000 0.00 0.00 0.00 4.02
379 380 1.661463 TGGAGGCAGAAGAATGGTCT 58.339 50.000 0.00 0.00 34.72 3.85
389 390 3.550437 AAGAATGGTCTTCCGAGGATG 57.450 47.619 0.00 0.00 40.18 3.51
390 391 2.752030 AGAATGGTCTTCCGAGGATGA 58.248 47.619 3.88 3.88 36.30 2.92
391 392 2.697751 AGAATGGTCTTCCGAGGATGAG 59.302 50.000 7.83 0.00 36.30 2.90
392 393 1.418334 ATGGTCTTCCGAGGATGAGG 58.582 55.000 7.83 0.00 36.30 3.86
393 394 0.335019 TGGTCTTCCGAGGATGAGGA 59.665 55.000 7.83 0.00 36.30 3.71
394 395 1.062886 TGGTCTTCCGAGGATGAGGAT 60.063 52.381 7.83 0.00 36.28 3.24
395 396 1.342819 GGTCTTCCGAGGATGAGGATG 59.657 57.143 7.83 0.00 36.28 3.51
396 397 2.311463 GTCTTCCGAGGATGAGGATGA 58.689 52.381 7.83 0.00 38.06 2.92
397 398 2.695666 GTCTTCCGAGGATGAGGATGAA 59.304 50.000 7.83 0.00 40.74 2.57
398 399 2.961741 TCTTCCGAGGATGAGGATGAAG 59.038 50.000 3.88 0.00 37.64 3.02
399 400 2.755952 TCCGAGGATGAGGATGAAGA 57.244 50.000 0.00 0.00 0.00 2.87
400 401 2.311463 TCCGAGGATGAGGATGAAGAC 58.689 52.381 0.00 0.00 0.00 3.01
401 402 1.000827 CCGAGGATGAGGATGAAGACG 60.001 57.143 0.00 0.00 0.00 4.18
402 403 1.950216 CGAGGATGAGGATGAAGACGA 59.050 52.381 0.00 0.00 0.00 4.20
403 404 2.031245 CGAGGATGAGGATGAAGACGAG 60.031 54.545 0.00 0.00 0.00 4.18
404 405 2.295909 GAGGATGAGGATGAAGACGAGG 59.704 54.545 0.00 0.00 0.00 4.63
405 406 2.091610 AGGATGAGGATGAAGACGAGGA 60.092 50.000 0.00 0.00 0.00 3.71
406 407 2.035321 GGATGAGGATGAAGACGAGGAC 59.965 54.545 0.00 0.00 0.00 3.85
407 408 1.095600 TGAGGATGAAGACGAGGACG 58.904 55.000 0.00 0.00 45.75 4.79
408 409 1.339727 TGAGGATGAAGACGAGGACGA 60.340 52.381 0.00 0.00 42.66 4.20
409 410 1.332375 GAGGATGAAGACGAGGACGAG 59.668 57.143 0.00 0.00 42.66 4.18
410 411 0.382515 GGATGAAGACGAGGACGAGG 59.617 60.000 0.00 0.00 42.66 4.63
411 412 1.380524 GATGAAGACGAGGACGAGGA 58.619 55.000 0.00 0.00 42.66 3.71
412 413 1.950909 GATGAAGACGAGGACGAGGAT 59.049 52.381 0.00 0.00 42.66 3.24
413 414 1.835494 TGAAGACGAGGACGAGGATT 58.165 50.000 0.00 0.00 42.66 3.01
414 415 1.472878 TGAAGACGAGGACGAGGATTG 59.527 52.381 0.00 0.00 42.66 2.67
415 416 1.743958 GAAGACGAGGACGAGGATTGA 59.256 52.381 0.00 0.00 42.66 2.57
416 417 2.060050 AGACGAGGACGAGGATTGAT 57.940 50.000 0.00 0.00 42.66 2.57
417 418 1.678627 AGACGAGGACGAGGATTGATG 59.321 52.381 0.00 0.00 42.66 3.07
418 419 1.405821 GACGAGGACGAGGATTGATGT 59.594 52.381 0.00 0.00 42.66 3.06
419 420 1.135139 ACGAGGACGAGGATTGATGTG 59.865 52.381 0.00 0.00 42.66 3.21
420 421 1.135139 CGAGGACGAGGATTGATGTGT 59.865 52.381 0.00 0.00 42.66 3.72
421 422 2.796383 CGAGGACGAGGATTGATGTGTC 60.796 54.545 0.00 0.00 42.66 3.67
422 423 2.428890 GAGGACGAGGATTGATGTGTCT 59.571 50.000 0.00 0.00 0.00 3.41
423 424 2.834549 AGGACGAGGATTGATGTGTCTT 59.165 45.455 0.00 0.00 0.00 3.01
424 425 3.261897 AGGACGAGGATTGATGTGTCTTT 59.738 43.478 0.00 0.00 0.00 2.52
425 426 3.619038 GGACGAGGATTGATGTGTCTTTC 59.381 47.826 0.00 0.00 0.00 2.62
426 427 4.245660 GACGAGGATTGATGTGTCTTTCA 58.754 43.478 0.00 0.00 0.00 2.69
427 428 4.836825 ACGAGGATTGATGTGTCTTTCAT 58.163 39.130 0.00 0.00 0.00 2.57
428 429 5.248640 ACGAGGATTGATGTGTCTTTCATT 58.751 37.500 0.00 0.00 0.00 2.57
429 430 5.707298 ACGAGGATTGATGTGTCTTTCATTT 59.293 36.000 0.00 0.00 0.00 2.32
430 431 6.025896 CGAGGATTGATGTGTCTTTCATTTG 58.974 40.000 0.00 0.00 0.00 2.32
431 432 6.348786 CGAGGATTGATGTGTCTTTCATTTGT 60.349 38.462 0.00 0.00 0.00 2.83
432 433 6.684686 AGGATTGATGTGTCTTTCATTTGTG 58.315 36.000 0.00 0.00 0.00 3.33
433 434 6.266103 AGGATTGATGTGTCTTTCATTTGTGT 59.734 34.615 0.00 0.00 0.00 3.72
434 435 6.583806 GGATTGATGTGTCTTTCATTTGTGTC 59.416 38.462 0.00 0.00 0.00 3.67
435 436 6.698008 TTGATGTGTCTTTCATTTGTGTCT 57.302 33.333 0.00 0.00 0.00 3.41
436 437 6.698008 TGATGTGTCTTTCATTTGTGTCTT 57.302 33.333 0.00 0.00 0.00 3.01
437 438 6.497437 TGATGTGTCTTTCATTTGTGTCTTG 58.503 36.000 0.00 0.00 0.00 3.02
438 439 6.318396 TGATGTGTCTTTCATTTGTGTCTTGA 59.682 34.615 0.00 0.00 0.00 3.02
439 440 6.507958 TGTGTCTTTCATTTGTGTCTTGAA 57.492 33.333 0.00 0.00 0.00 2.69
440 441 6.321717 TGTGTCTTTCATTTGTGTCTTGAAC 58.678 36.000 0.00 0.00 0.00 3.18
441 442 6.150976 TGTGTCTTTCATTTGTGTCTTGAACT 59.849 34.615 0.00 0.00 0.00 3.01
442 443 7.029563 GTGTCTTTCATTTGTGTCTTGAACTT 58.970 34.615 0.00 0.00 0.00 2.66
443 444 7.008628 GTGTCTTTCATTTGTGTCTTGAACTTG 59.991 37.037 0.00 0.00 0.00 3.16
444 445 7.094420 TGTCTTTCATTTGTGTCTTGAACTTGA 60.094 33.333 0.00 0.00 0.00 3.02
445 446 7.917505 GTCTTTCATTTGTGTCTTGAACTTGAT 59.082 33.333 0.00 0.00 0.00 2.57
446 447 8.469200 TCTTTCATTTGTGTCTTGAACTTGATT 58.531 29.630 0.00 0.00 0.00 2.57
447 448 9.090692 CTTTCATTTGTGTCTTGAACTTGATTT 57.909 29.630 0.00 0.00 0.00 2.17
448 449 7.990541 TCATTTGTGTCTTGAACTTGATTTG 57.009 32.000 0.00 0.00 0.00 2.32
449 450 6.476380 TCATTTGTGTCTTGAACTTGATTTGC 59.524 34.615 0.00 0.00 0.00 3.68
450 451 4.979943 TGTGTCTTGAACTTGATTTGCA 57.020 36.364 0.00 0.00 0.00 4.08
451 452 5.518848 TGTGTCTTGAACTTGATTTGCAT 57.481 34.783 0.00 0.00 0.00 3.96
452 453 5.904941 TGTGTCTTGAACTTGATTTGCATT 58.095 33.333 0.00 0.00 0.00 3.56
453 454 6.339730 TGTGTCTTGAACTTGATTTGCATTT 58.660 32.000 0.00 0.00 0.00 2.32
454 455 6.817641 TGTGTCTTGAACTTGATTTGCATTTT 59.182 30.769 0.00 0.00 0.00 1.82
455 456 7.121272 GTGTCTTGAACTTGATTTGCATTTTG 58.879 34.615 0.00 0.00 0.00 2.44
456 457 7.010367 GTGTCTTGAACTTGATTTGCATTTTGA 59.990 33.333 0.00 0.00 0.00 2.69
457 458 7.548427 TGTCTTGAACTTGATTTGCATTTTGAA 59.452 29.630 0.00 0.00 0.00 2.69
458 459 7.847564 GTCTTGAACTTGATTTGCATTTTGAAC 59.152 33.333 0.00 0.00 0.00 3.18
459 460 7.765360 TCTTGAACTTGATTTGCATTTTGAACT 59.235 29.630 0.00 0.00 0.00 3.01
460 461 7.846644 TGAACTTGATTTGCATTTTGAACTT 57.153 28.000 0.00 0.00 0.00 2.66
461 462 7.686519 TGAACTTGATTTGCATTTTGAACTTG 58.313 30.769 0.00 0.00 0.00 3.16
462 463 6.607735 ACTTGATTTGCATTTTGAACTTGG 57.392 33.333 0.00 0.00 0.00 3.61
463 464 6.114767 ACTTGATTTGCATTTTGAACTTGGT 58.885 32.000 0.00 0.00 0.00 3.67
464 465 6.598850 ACTTGATTTGCATTTTGAACTTGGTT 59.401 30.769 0.00 0.00 0.00 3.67
465 466 6.360844 TGATTTGCATTTTGAACTTGGTTG 57.639 33.333 0.00 0.00 0.00 3.77
466 467 5.296283 TGATTTGCATTTTGAACTTGGTTGG 59.704 36.000 0.00 0.00 0.00 3.77
467 468 4.478206 TTGCATTTTGAACTTGGTTGGA 57.522 36.364 0.00 0.00 0.00 3.53
468 469 3.791245 TGCATTTTGAACTTGGTTGGAC 58.209 40.909 0.00 0.00 0.00 4.02
469 470 2.794350 GCATTTTGAACTTGGTTGGACG 59.206 45.455 0.00 0.00 0.00 4.79
470 471 3.490078 GCATTTTGAACTTGGTTGGACGA 60.490 43.478 0.00 0.00 0.00 4.20
471 472 4.677584 CATTTTGAACTTGGTTGGACGAA 58.322 39.130 0.00 0.00 0.00 3.85
472 473 3.768468 TTTGAACTTGGTTGGACGAAC 57.232 42.857 0.00 0.00 0.00 3.95
473 474 2.702592 TGAACTTGGTTGGACGAACT 57.297 45.000 0.14 0.00 34.66 3.01
474 475 2.993937 TGAACTTGGTTGGACGAACTT 58.006 42.857 0.14 0.00 34.66 2.66
475 476 2.680841 TGAACTTGGTTGGACGAACTTG 59.319 45.455 0.14 0.00 34.66 3.16
476 477 2.413310 ACTTGGTTGGACGAACTTGT 57.587 45.000 0.14 0.00 34.66 3.16
477 478 2.014128 ACTTGGTTGGACGAACTTGTG 58.986 47.619 0.14 0.00 34.66 3.33
478 479 1.333619 CTTGGTTGGACGAACTTGTGG 59.666 52.381 0.14 0.00 34.66 4.17
479 480 0.464735 TGGTTGGACGAACTTGTGGG 60.465 55.000 0.14 0.00 34.66 4.61
480 481 0.464916 GGTTGGACGAACTTGTGGGT 60.465 55.000 0.14 0.00 34.66 4.51
481 482 1.202675 GGTTGGACGAACTTGTGGGTA 60.203 52.381 0.14 0.00 34.66 3.69
482 483 2.551504 GGTTGGACGAACTTGTGGGTAT 60.552 50.000 0.14 0.00 34.66 2.73
483 484 2.465860 TGGACGAACTTGTGGGTATG 57.534 50.000 0.00 0.00 0.00 2.39
484 485 1.972075 TGGACGAACTTGTGGGTATGA 59.028 47.619 0.00 0.00 0.00 2.15
485 486 2.569853 TGGACGAACTTGTGGGTATGAT 59.430 45.455 0.00 0.00 0.00 2.45
486 487 3.008594 TGGACGAACTTGTGGGTATGATT 59.991 43.478 0.00 0.00 0.00 2.57
487 488 4.007659 GGACGAACTTGTGGGTATGATTT 58.992 43.478 0.00 0.00 0.00 2.17
488 489 4.457949 GGACGAACTTGTGGGTATGATTTT 59.542 41.667 0.00 0.00 0.00 1.82
489 490 5.644636 GGACGAACTTGTGGGTATGATTTTA 59.355 40.000 0.00 0.00 0.00 1.52
490 491 6.149807 GGACGAACTTGTGGGTATGATTTTAA 59.850 38.462 0.00 0.00 0.00 1.52
491 492 7.308710 GGACGAACTTGTGGGTATGATTTTAAA 60.309 37.037 0.00 0.00 0.00 1.52
492 493 7.364970 ACGAACTTGTGGGTATGATTTTAAAC 58.635 34.615 0.00 0.00 0.00 2.01
493 494 7.229907 ACGAACTTGTGGGTATGATTTTAAACT 59.770 33.333 0.00 0.00 0.00 2.66
494 495 8.079809 CGAACTTGTGGGTATGATTTTAAACTT 58.920 33.333 0.00 0.00 0.00 2.66
495 496 9.191995 GAACTTGTGGGTATGATTTTAAACTTG 57.808 33.333 0.00 0.00 0.00 3.16
496 497 8.245195 ACTTGTGGGTATGATTTTAAACTTGT 57.755 30.769 0.00 0.00 0.00 3.16
497 498 8.141268 ACTTGTGGGTATGATTTTAAACTTGTG 58.859 33.333 0.00 0.00 0.00 3.33
498 499 6.987386 TGTGGGTATGATTTTAAACTTGTGG 58.013 36.000 0.00 0.00 0.00 4.17
499 500 6.015010 TGTGGGTATGATTTTAAACTTGTGGG 60.015 38.462 0.00 0.00 0.00 4.61
500 501 5.046950 TGGGTATGATTTTAAACTTGTGGGC 60.047 40.000 0.00 0.00 0.00 5.36
501 502 5.046950 GGGTATGATTTTAAACTTGTGGGCA 60.047 40.000 0.00 0.00 0.00 5.36
502 503 6.351796 GGGTATGATTTTAAACTTGTGGGCAT 60.352 38.462 0.00 0.00 0.00 4.40
503 504 6.534793 GGTATGATTTTAAACTTGTGGGCATG 59.465 38.462 0.00 0.00 0.00 4.06
504 505 5.798125 TGATTTTAAACTTGTGGGCATGA 57.202 34.783 0.00 0.00 0.00 3.07
505 506 6.166984 TGATTTTAAACTTGTGGGCATGAA 57.833 33.333 0.00 0.00 0.00 2.57
506 507 5.988561 TGATTTTAAACTTGTGGGCATGAAC 59.011 36.000 0.00 0.00 0.00 3.18
507 508 5.606348 TTTTAAACTTGTGGGCATGAACT 57.394 34.783 0.00 0.00 0.00 3.01
508 509 5.606348 TTTAAACTTGTGGGCATGAACTT 57.394 34.783 0.00 0.00 0.00 2.66
509 510 5.606348 TTAAACTTGTGGGCATGAACTTT 57.394 34.783 0.00 0.00 0.00 2.66
510 511 4.486125 AAACTTGTGGGCATGAACTTTT 57.514 36.364 0.00 0.00 0.00 2.27
511 512 5.606348 AAACTTGTGGGCATGAACTTTTA 57.394 34.783 0.00 0.00 0.00 1.52
512 513 5.806654 AACTTGTGGGCATGAACTTTTAT 57.193 34.783 0.00 0.00 0.00 1.40
513 514 5.806654 ACTTGTGGGCATGAACTTTTATT 57.193 34.783 0.00 0.00 0.00 1.40
514 515 5.783111 ACTTGTGGGCATGAACTTTTATTC 58.217 37.500 0.00 0.00 0.00 1.75
515 516 5.304101 ACTTGTGGGCATGAACTTTTATTCA 59.696 36.000 0.00 0.00 42.62 2.57
517 518 5.964758 TGTGGGCATGAACTTTTATTCATC 58.035 37.500 0.00 0.00 44.30 2.92
518 519 5.479724 TGTGGGCATGAACTTTTATTCATCA 59.520 36.000 0.00 0.00 44.30 3.07
519 520 6.014755 TGTGGGCATGAACTTTTATTCATCAA 60.015 34.615 0.00 0.00 44.30 2.57
520 521 6.311200 GTGGGCATGAACTTTTATTCATCAAC 59.689 38.462 0.00 0.00 44.30 3.18
521 522 6.211184 TGGGCATGAACTTTTATTCATCAACT 59.789 34.615 0.00 0.00 44.30 3.16
522 523 7.099120 GGGCATGAACTTTTATTCATCAACTT 58.901 34.615 0.00 0.00 44.30 2.66
523 524 7.063780 GGGCATGAACTTTTATTCATCAACTTG 59.936 37.037 0.00 0.00 44.30 3.16
524 525 7.599998 GGCATGAACTTTTATTCATCAACTTGT 59.400 33.333 0.00 0.00 44.30 3.16
525 526 8.981647 GCATGAACTTTTATTCATCAACTTGTT 58.018 29.630 0.00 0.00 44.30 2.83
528 529 9.868277 TGAACTTTTATTCATCAACTTGTTTGT 57.132 25.926 0.00 0.00 33.77 2.83
530 531 9.651913 AACTTTTATTCATCAACTTGTTTGTGT 57.348 25.926 0.00 0.00 36.49 3.72
531 532 9.086336 ACTTTTATTCATCAACTTGTTTGTGTG 57.914 29.630 0.00 0.00 36.49 3.82
532 533 9.299963 CTTTTATTCATCAACTTGTTTGTGTGA 57.700 29.630 0.00 0.00 36.49 3.58
533 534 9.645059 TTTTATTCATCAACTTGTTTGTGTGAA 57.355 25.926 8.75 8.75 41.10 3.18
534 535 9.645059 TTTATTCATCAACTTGTTTGTGTGAAA 57.355 25.926 9.74 0.00 40.68 2.69
535 536 9.814899 TTATTCATCAACTTGTTTGTGTGAAAT 57.185 25.926 9.74 0.00 40.68 2.17
536 537 8.721019 ATTCATCAACTTGTTTGTGTGAAATT 57.279 26.923 9.74 0.00 40.68 1.82
537 538 8.545229 TTCATCAACTTGTTTGTGTGAAATTT 57.455 26.923 0.00 0.00 37.66 1.82
538 539 8.545229 TCATCAACTTGTTTGTGTGAAATTTT 57.455 26.923 0.00 0.00 36.49 1.82
539 540 9.645059 TCATCAACTTGTTTGTGTGAAATTTTA 57.355 25.926 0.00 0.00 36.49 1.52
565 566 7.915293 ATGTCATGTTCATTGCATTTTGAAT 57.085 28.000 9.58 0.00 34.60 2.57
566 567 7.123160 TGTCATGTTCATTGCATTTTGAATG 57.877 32.000 9.58 6.30 34.60 2.67
567 568 6.706716 TGTCATGTTCATTGCATTTTGAATGT 59.293 30.769 9.58 1.69 34.60 2.71
568 569 7.226918 TGTCATGTTCATTGCATTTTGAATGTT 59.773 29.630 9.58 0.00 34.60 2.71
569 570 8.071368 GTCATGTTCATTGCATTTTGAATGTTT 58.929 29.630 9.58 0.00 34.60 2.83
570 571 8.283992 TCATGTTCATTGCATTTTGAATGTTTC 58.716 29.630 9.58 0.28 34.60 2.78
571 572 7.549615 TGTTCATTGCATTTTGAATGTTTCA 57.450 28.000 9.58 2.31 34.60 2.69
603 604 5.199024 TGTGTCCAAAATGCCATATATGC 57.801 39.130 7.24 3.97 0.00 3.14
604 605 4.648307 TGTGTCCAAAATGCCATATATGCA 59.352 37.500 7.24 9.35 43.97 3.96
605 606 5.128335 TGTGTCCAAAATGCCATATATGCAA 59.872 36.000 7.24 0.00 42.92 4.08
606 607 6.183360 TGTGTCCAAAATGCCATATATGCAAT 60.183 34.615 7.24 0.28 42.92 3.56
607 608 6.146510 GTGTCCAAAATGCCATATATGCAATG 59.853 38.462 7.24 9.41 42.92 2.82
608 609 5.121142 GTCCAAAATGCCATATATGCAATGC 59.879 40.000 7.24 0.00 42.92 3.56
609 610 4.393680 CCAAAATGCCATATATGCAATGCC 59.606 41.667 7.24 0.00 42.92 4.40
610 611 3.899052 AATGCCATATATGCAATGCCC 57.101 42.857 7.24 0.00 42.92 5.36
611 612 1.559368 TGCCATATATGCAATGCCCC 58.441 50.000 7.24 0.00 35.40 5.80
612 613 0.457035 GCCATATATGCAATGCCCCG 59.543 55.000 7.24 0.00 0.00 5.73
613 614 1.105457 CCATATATGCAATGCCCCGG 58.895 55.000 7.24 0.00 0.00 5.73
614 615 0.457035 CATATATGCAATGCCCCGGC 59.543 55.000 1.53 0.00 42.35 6.13
615 616 1.031571 ATATATGCAATGCCCCGGCG 61.032 55.000 1.53 0.00 45.51 6.46
616 617 2.118233 TATATGCAATGCCCCGGCGA 62.118 55.000 9.30 0.00 45.51 5.54
617 618 3.976497 TATATGCAATGCCCCGGCGAG 62.976 57.143 9.30 0.00 45.51 5.03
654 655 4.741781 GACGCGCACGCTGCATTT 62.742 61.111 13.70 0.00 45.36 2.32
655 656 4.326766 ACGCGCACGCTGCATTTT 62.327 55.556 13.70 0.00 45.36 1.82
656 657 2.202285 CGCGCACGCTGCATTTTA 60.202 55.556 13.70 0.00 45.36 1.52
657 658 2.210375 CGCGCACGCTGCATTTTAG 61.210 57.895 13.70 0.00 45.36 1.85
658 659 2.499603 GCGCACGCTGCATTTTAGC 61.500 57.895 7.96 0.00 45.36 3.09
663 664 3.968180 GCTGCATTTTAGCGCGAC 58.032 55.556 12.10 0.04 37.31 5.19
664 665 1.425428 GCTGCATTTTAGCGCGACT 59.575 52.632 12.10 9.58 37.31 4.18
665 666 0.858961 GCTGCATTTTAGCGCGACTG 60.859 55.000 12.10 0.00 37.31 3.51
666 667 0.443869 CTGCATTTTAGCGCGACTGT 59.556 50.000 12.10 0.00 37.31 3.55
667 668 0.871722 TGCATTTTAGCGCGACTGTT 59.128 45.000 12.10 0.00 37.31 3.16
668 669 1.250476 GCATTTTAGCGCGACTGTTG 58.750 50.000 12.10 0.02 0.00 3.33
669 670 1.882198 CATTTTAGCGCGACTGTTGG 58.118 50.000 12.10 0.00 0.00 3.77
670 671 1.463056 CATTTTAGCGCGACTGTTGGA 59.537 47.619 12.10 0.00 0.00 3.53
671 672 1.584175 TTTTAGCGCGACTGTTGGAA 58.416 45.000 12.10 0.00 0.00 3.53
672 673 0.863144 TTTAGCGCGACTGTTGGAAC 59.137 50.000 12.10 0.00 0.00 3.62
673 674 0.947180 TTAGCGCGACTGTTGGAACC 60.947 55.000 12.10 0.00 0.00 3.62
674 675 2.089887 TAGCGCGACTGTTGGAACCA 62.090 55.000 12.10 0.00 0.00 3.67
675 676 2.954753 GCGCGACTGTTGGAACCAG 61.955 63.158 12.10 0.00 0.00 4.00
676 677 2.946762 GCGACTGTTGGAACCAGC 59.053 61.111 0.81 0.81 0.00 4.85
677 678 2.954753 GCGACTGTTGGAACCAGCG 61.955 63.158 3.51 0.00 0.00 5.18
678 679 2.946762 GACTGTTGGAACCAGCGC 59.053 61.111 0.00 0.00 0.00 5.92
679 680 1.598130 GACTGTTGGAACCAGCGCT 60.598 57.895 2.64 2.64 0.00 5.92
680 681 1.845809 GACTGTTGGAACCAGCGCTG 61.846 60.000 30.52 30.52 0.00 5.18
695 696 4.454717 CTGGCGGCCGCGTAAAAC 62.455 66.667 41.05 27.27 43.06 2.43
698 699 4.454717 GCGGCCGCGTAAAACCAG 62.455 66.667 37.24 0.00 0.00 4.00
699 700 2.739287 CGGCCGCGTAAAACCAGA 60.739 61.111 14.67 0.00 0.00 3.86
700 701 2.104253 CGGCCGCGTAAAACCAGAT 61.104 57.895 14.67 0.00 0.00 2.90
701 702 1.427819 GGCCGCGTAAAACCAGATG 59.572 57.895 4.92 0.00 0.00 2.90
702 703 1.022451 GGCCGCGTAAAACCAGATGA 61.022 55.000 4.92 0.00 0.00 2.92
703 704 0.800012 GCCGCGTAAAACCAGATGAA 59.200 50.000 4.92 0.00 0.00 2.57
704 705 1.465187 GCCGCGTAAAACCAGATGAAC 60.465 52.381 4.92 0.00 0.00 3.18
705 706 1.201877 CCGCGTAAAACCAGATGAACG 60.202 52.381 4.92 0.00 0.00 3.95
706 707 1.201877 CGCGTAAAACCAGATGAACGG 60.202 52.381 0.00 0.00 0.00 4.44
707 708 1.465187 GCGTAAAACCAGATGAACGGC 60.465 52.381 0.00 0.00 0.00 5.68
708 709 1.801771 CGTAAAACCAGATGAACGGCA 59.198 47.619 0.00 0.00 0.00 5.69
709 710 2.412325 CGTAAAACCAGATGAACGGCAC 60.412 50.000 0.00 0.00 0.00 5.01
723 724 2.943653 GCACGCGGCAAACTAGTT 59.056 55.556 12.47 1.12 43.97 2.24
724 725 1.281656 GCACGCGGCAAACTAGTTT 59.718 52.632 15.22 15.22 43.97 2.66
725 726 0.317519 GCACGCGGCAAACTAGTTTT 60.318 50.000 18.25 0.00 43.97 2.43
726 727 1.862411 GCACGCGGCAAACTAGTTTTT 60.862 47.619 18.25 0.00 43.97 1.94
727 728 2.602694 GCACGCGGCAAACTAGTTTTTA 60.603 45.455 18.25 0.00 43.97 1.52
728 729 3.223157 CACGCGGCAAACTAGTTTTTAG 58.777 45.455 18.25 12.52 0.00 1.85
729 730 2.239201 CGCGGCAAACTAGTTTTTAGC 58.761 47.619 18.25 19.47 0.00 3.09
730 731 2.239201 GCGGCAAACTAGTTTTTAGCG 58.761 47.619 18.25 14.49 0.00 4.26
731 732 2.239201 CGGCAAACTAGTTTTTAGCGC 58.761 47.619 18.25 16.73 0.00 5.92
732 733 2.239201 GGCAAACTAGTTTTTAGCGCG 58.761 47.619 18.25 0.00 0.00 6.86
733 734 1.642360 GCAAACTAGTTTTTAGCGCGC 59.358 47.619 26.66 26.66 0.00 6.86
734 735 1.896193 CAAACTAGTTTTTAGCGCGCG 59.104 47.619 28.44 28.44 0.00 6.86
735 736 0.441145 AACTAGTTTTTAGCGCGCGG 59.559 50.000 33.06 13.66 0.00 6.46
736 737 1.296649 CTAGTTTTTAGCGCGCGGC 60.297 57.895 33.06 23.14 44.05 6.53
754 755 3.018973 GTGAAACGCGGCTGTTGA 58.981 55.556 12.47 0.00 31.10 3.18
755 756 1.353804 GTGAAACGCGGCTGTTGAA 59.646 52.632 12.47 1.41 31.10 2.69
756 757 0.657368 GTGAAACGCGGCTGTTGAAG 60.657 55.000 12.47 0.00 31.10 3.02
757 758 0.812014 TGAAACGCGGCTGTTGAAGA 60.812 50.000 12.47 0.00 31.10 2.87
758 759 0.517316 GAAACGCGGCTGTTGAAGAT 59.483 50.000 12.47 0.00 31.10 2.40
759 760 0.238289 AAACGCGGCTGTTGAAGATG 59.762 50.000 12.47 0.00 31.10 2.90
760 761 2.099062 CGCGGCTGTTGAAGATGC 59.901 61.111 0.00 0.00 0.00 3.91
761 762 2.393768 CGCGGCTGTTGAAGATGCT 61.394 57.895 0.00 0.00 0.00 3.79
770 771 5.298777 GGCTGTTGAAGATGCTCTAATGATT 59.701 40.000 0.00 0.00 0.00 2.57
782 783 5.007626 TGCTCTAATGATTGATACGTTTGCC 59.992 40.000 0.00 0.00 0.00 4.52
806 807 3.087031 CTGCAATGAGGTCCTTGTCAAT 58.913 45.455 0.00 0.00 0.00 2.57
822 823 7.013846 TCCTTGTCAATTTACAACCCAAGTTAG 59.986 37.037 1.01 0.00 35.56 2.34
872 873 1.126113 CGCGACCTCAACACATGTAAC 59.874 52.381 0.00 0.00 0.00 2.50
1167 1245 2.632512 GTTGGAGAAATTTGGCTTCCCA 59.367 45.455 0.00 0.00 40.06 4.37
1387 1465 4.489771 GGGGCATCGACCAGGTGG 62.490 72.222 0.00 0.00 42.17 4.61
1551 1629 1.516365 CGACGATGTAGGATCGGGCT 61.516 60.000 8.76 0.00 44.98 5.19
1622 1700 0.901827 ATTTGGTTTCCGGGATTGGC 59.098 50.000 0.00 0.00 0.00 4.52
1623 1701 1.528292 TTTGGTTTCCGGGATTGGCG 61.528 55.000 0.00 0.00 0.00 5.69
1624 1702 3.822192 GGTTTCCGGGATTGGCGC 61.822 66.667 0.00 0.00 0.00 6.53
1682 1768 0.599060 TGTAAGTCGACGGATGCACA 59.401 50.000 10.46 6.40 0.00 4.57
1683 1769 1.269166 GTAAGTCGACGGATGCACAG 58.731 55.000 10.46 0.00 0.00 3.66
1684 1770 0.457853 TAAGTCGACGGATGCACAGC 60.458 55.000 10.46 0.00 0.00 4.40
1685 1771 2.432456 GTCGACGGATGCACAGCA 60.432 61.111 0.00 0.00 44.86 4.41
1764 1850 5.179555 GGGTGTCGATTCTATTTGCCTTATC 59.820 44.000 0.00 0.00 0.00 1.75
1793 1879 8.428063 TGTGATTCTTCTTCTTCTTCTTCTTCT 58.572 33.333 0.00 0.00 0.00 2.85
1794 1880 9.271828 GTGATTCTTCTTCTTCTTCTTCTTCTT 57.728 33.333 0.00 0.00 0.00 2.52
1795 1881 9.487790 TGATTCTTCTTCTTCTTCTTCTTCTTC 57.512 33.333 0.00 0.00 0.00 2.87
1796 1882 9.710900 GATTCTTCTTCTTCTTCTTCTTCTTCT 57.289 33.333 0.00 0.00 0.00 2.85
1798 1884 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
1799 1885 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
1800 1886 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
1801 1887 9.898152 TTCTTCTTCTTCTTCTTCTTCTTCTTT 57.102 29.630 0.00 0.00 0.00 2.52
1841 1927 7.630082 TGTCATATTTTGCTTAGTACTCCCTT 58.370 34.615 0.00 0.00 0.00 3.95
1857 1943 9.584008 AGTACTCCCTTCGTCTCATAATATAAA 57.416 33.333 0.00 0.00 0.00 1.40
1860 1946 8.925338 ACTCCCTTCGTCTCATAATATAAAAGT 58.075 33.333 0.00 0.00 0.00 2.66
1911 1997 3.904339 GCTCTTGTATTATGGGAGGAGGA 59.096 47.826 0.00 0.00 0.00 3.71
2054 2144 1.219664 CGTCTAACCCCAATGCCGA 59.780 57.895 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.258755 GCGCGCTAAAATGACCAAATT 58.741 42.857 26.67 0.00 0.00 1.82
1 2 1.793714 CGCGCGCTAAAATGACCAAAT 60.794 47.619 30.48 0.00 0.00 2.32
2 3 0.453615 CGCGCGCTAAAATGACCAAA 60.454 50.000 30.48 0.00 0.00 3.28
3 4 1.133664 CGCGCGCTAAAATGACCAA 59.866 52.632 30.48 0.00 0.00 3.67
4 5 0.736672 TACGCGCGCTAAAATGACCA 60.737 50.000 32.58 0.57 0.00 4.02
5 6 0.370958 TTACGCGCGCTAAAATGACC 59.629 50.000 32.58 0.00 0.00 4.02
6 7 1.060122 AGTTACGCGCGCTAAAATGAC 59.940 47.619 32.58 16.08 0.00 3.06
7 8 1.322338 GAGTTACGCGCGCTAAAATGA 59.678 47.619 32.58 2.28 0.00 2.57
8 9 1.715030 GAGTTACGCGCGCTAAAATG 58.285 50.000 32.58 14.95 0.00 2.32
9 10 0.296642 CGAGTTACGCGCGCTAAAAT 59.703 50.000 32.58 20.82 33.01 1.82
10 11 1.676438 CCGAGTTACGCGCGCTAAAA 61.676 55.000 32.58 16.44 39.07 1.52
11 12 2.153945 CCGAGTTACGCGCGCTAAA 61.154 57.895 32.58 19.21 39.07 1.85
12 13 2.577644 CCGAGTTACGCGCGCTAA 60.578 61.111 32.58 23.09 39.07 3.09
19 20 3.484547 CAACCCGCCGAGTTACGC 61.485 66.667 0.00 0.00 41.07 4.42
20 21 3.484547 GCAACCCGCCGAGTTACG 61.485 66.667 0.00 0.00 42.18 3.18
21 22 2.047560 AGCAACCCGCCGAGTTAC 60.048 61.111 0.00 0.00 44.04 2.50
22 23 2.263540 GAGCAACCCGCCGAGTTA 59.736 61.111 0.00 0.00 44.04 2.24
23 24 4.699522 GGAGCAACCCGCCGAGTT 62.700 66.667 0.00 0.00 44.04 3.01
37 38 0.676466 TTATTGTGCGCCCACTGGAG 60.676 55.000 4.18 0.00 42.54 3.86
38 39 0.034574 ATTATTGTGCGCCCACTGGA 60.035 50.000 4.18 0.00 42.54 3.86
39 40 0.381801 GATTATTGTGCGCCCACTGG 59.618 55.000 4.18 0.00 42.54 4.00
40 41 0.027979 CGATTATTGTGCGCCCACTG 59.972 55.000 4.18 0.00 42.54 3.66
41 42 1.714899 GCGATTATTGTGCGCCCACT 61.715 55.000 4.18 0.00 44.55 4.00
42 43 1.298339 GCGATTATTGTGCGCCCAC 60.298 57.895 4.18 0.00 44.55 4.61
43 44 3.106552 GCGATTATTGTGCGCCCA 58.893 55.556 4.18 0.00 44.55 5.36
60 61 3.097728 CTCCTTATACCGCGCGCG 61.098 66.667 43.73 43.73 39.44 6.86
61 62 1.590792 AACTCCTTATACCGCGCGC 60.591 57.895 27.36 23.91 0.00 6.86
62 63 1.213094 CCAACTCCTTATACCGCGCG 61.213 60.000 25.67 25.67 0.00 6.86
63 64 0.878961 CCCAACTCCTTATACCGCGC 60.879 60.000 0.00 0.00 0.00 6.86
64 65 0.878961 GCCCAACTCCTTATACCGCG 60.879 60.000 0.00 0.00 0.00 6.46
65 66 0.878961 CGCCCAACTCCTTATACCGC 60.879 60.000 0.00 0.00 0.00 5.68
66 67 0.878961 GCGCCCAACTCCTTATACCG 60.879 60.000 0.00 0.00 0.00 4.02
67 68 0.878961 CGCGCCCAACTCCTTATACC 60.879 60.000 0.00 0.00 0.00 2.73
68 69 1.496403 GCGCGCCCAACTCCTTATAC 61.496 60.000 23.24 0.00 0.00 1.47
69 70 1.227438 GCGCGCCCAACTCCTTATA 60.227 57.895 23.24 0.00 0.00 0.98
70 71 2.513897 GCGCGCCCAACTCCTTAT 60.514 61.111 23.24 0.00 0.00 1.73
87 88 0.452950 CGAGATAGCGAATCCGACCG 60.453 60.000 0.00 0.00 38.22 4.79
88 89 0.729816 GCGAGATAGCGAATCCGACC 60.730 60.000 13.15 0.00 38.22 4.79
89 90 2.714530 GCGAGATAGCGAATCCGAC 58.285 57.895 13.15 5.31 38.22 4.79
98 99 0.663568 AATACACCGCGCGAGATAGC 60.664 55.000 34.63 0.00 0.00 2.97
99 100 1.452025 CAAATACACCGCGCGAGATAG 59.548 52.381 34.63 17.10 0.00 2.08
100 101 1.483316 CAAATACACCGCGCGAGATA 58.517 50.000 34.63 19.73 0.00 1.98
101 102 1.151777 CCAAATACACCGCGCGAGAT 61.152 55.000 34.63 18.05 0.00 2.75
102 103 1.807981 CCAAATACACCGCGCGAGA 60.808 57.895 34.63 13.60 0.00 4.04
103 104 2.701006 CCAAATACACCGCGCGAG 59.299 61.111 34.63 25.26 0.00 5.03
104 105 2.816083 CCCAAATACACCGCGCGA 60.816 61.111 34.63 12.32 0.00 5.87
105 106 3.871574 CCCCAAATACACCGCGCG 61.872 66.667 25.67 25.67 0.00 6.86
106 107 4.187810 GCCCCAAATACACCGCGC 62.188 66.667 0.00 0.00 0.00 6.86
107 108 3.871574 CGCCCCAAATACACCGCG 61.872 66.667 0.00 0.00 0.00 6.46
108 109 4.187810 GCGCCCCAAATACACCGC 62.188 66.667 0.00 0.00 34.50 5.68
109 110 3.514362 GGCGCCCCAAATACACCG 61.514 66.667 18.11 0.00 0.00 4.94
110 111 3.144871 GGGCGCCCCAAATACACC 61.145 66.667 36.64 5.01 44.65 4.16
111 112 3.514362 CGGGCGCCCCAAATACAC 61.514 66.667 39.24 11.89 45.83 2.90
112 113 3.570822 AACGGGCGCCCCAAATACA 62.571 57.895 39.24 0.00 45.83 2.29
113 114 2.274232 GAAACGGGCGCCCCAAATAC 62.274 60.000 39.24 21.15 45.83 1.89
114 115 2.035940 AAACGGGCGCCCCAAATA 59.964 55.556 39.24 0.00 45.83 1.40
115 116 3.378602 GAAACGGGCGCCCCAAAT 61.379 61.111 39.24 23.00 45.83 2.32
153 154 4.427661 AGAGAGTGCGGTGCGAGC 62.428 66.667 0.00 0.00 0.00 5.03
154 155 2.202544 GAGAGAGTGCGGTGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
155 156 3.749064 GGAGAGAGTGCGGTGCGA 61.749 66.667 0.00 0.00 0.00 5.10
156 157 3.691744 GAGGAGAGAGTGCGGTGCG 62.692 68.421 0.00 0.00 0.00 5.34
157 158 2.183046 GAGGAGAGAGTGCGGTGC 59.817 66.667 0.00 0.00 0.00 5.01
158 159 1.662438 GGAGAGGAGAGAGTGCGGTG 61.662 65.000 0.00 0.00 0.00 4.94
159 160 1.379309 GGAGAGGAGAGAGTGCGGT 60.379 63.158 0.00 0.00 0.00 5.68
160 161 2.477176 CGGAGAGGAGAGAGTGCGG 61.477 68.421 0.00 0.00 0.00 5.69
161 162 3.106552 CGGAGAGGAGAGAGTGCG 58.893 66.667 0.00 0.00 0.00 5.34
162 163 2.781158 GGCGGAGAGGAGAGAGTGC 61.781 68.421 0.00 0.00 0.00 4.40
163 164 1.077068 AGGCGGAGAGGAGAGAGTG 60.077 63.158 0.00 0.00 0.00 3.51
164 165 1.226262 GAGGCGGAGAGGAGAGAGT 59.774 63.158 0.00 0.00 0.00 3.24
165 166 1.528309 GGAGGCGGAGAGGAGAGAG 60.528 68.421 0.00 0.00 0.00 3.20
166 167 0.694783 TAGGAGGCGGAGAGGAGAGA 60.695 60.000 0.00 0.00 0.00 3.10
167 168 0.536460 GTAGGAGGCGGAGAGGAGAG 60.536 65.000 0.00 0.00 0.00 3.20
168 169 1.532728 GTAGGAGGCGGAGAGGAGA 59.467 63.158 0.00 0.00 0.00 3.71
169 170 1.894756 CGTAGGAGGCGGAGAGGAG 60.895 68.421 0.00 0.00 0.00 3.69
170 171 2.192443 CGTAGGAGGCGGAGAGGA 59.808 66.667 0.00 0.00 0.00 3.71
171 172 3.597728 GCGTAGGAGGCGGAGAGG 61.598 72.222 0.00 0.00 0.00 3.69
172 173 3.597728 GGCGTAGGAGGCGGAGAG 61.598 72.222 0.00 0.00 0.00 3.20
205 206 3.803082 CATGGGTGCAGTTCGCCG 61.803 66.667 0.00 0.00 46.36 6.46
206 207 3.443045 CCATGGGTGCAGTTCGCC 61.443 66.667 2.85 0.00 44.67 5.54
207 208 2.359850 TCCATGGGTGCAGTTCGC 60.360 61.111 13.02 0.00 42.89 4.70
208 209 1.302431 TGTCCATGGGTGCAGTTCG 60.302 57.895 13.02 0.00 0.00 3.95
209 210 0.537143 TGTGTCCATGGGTGCAGTTC 60.537 55.000 13.02 0.00 0.00 3.01
210 211 0.823356 GTGTGTCCATGGGTGCAGTT 60.823 55.000 13.02 0.00 0.00 3.16
211 212 1.228245 GTGTGTCCATGGGTGCAGT 60.228 57.895 13.02 0.00 0.00 4.40
212 213 2.327343 CGTGTGTCCATGGGTGCAG 61.327 63.158 13.02 0.00 0.00 4.41
213 214 2.281414 CGTGTGTCCATGGGTGCA 60.281 61.111 13.02 6.19 0.00 4.57
214 215 3.737172 GCGTGTGTCCATGGGTGC 61.737 66.667 13.02 3.37 0.00 5.01
215 216 3.422303 CGCGTGTGTCCATGGGTG 61.422 66.667 13.02 0.00 36.18 4.61
237 238 4.489771 GATGGGGTGAGCGGGGTG 62.490 72.222 0.00 0.00 0.00 4.61
239 240 3.930394 TATAGGATGGGGTGAGCGGGG 62.930 61.905 0.00 0.00 0.00 5.73
240 241 0.544357 TATAGGATGGGGTGAGCGGG 60.544 60.000 0.00 0.00 0.00 6.13
241 242 0.898320 CTATAGGATGGGGTGAGCGG 59.102 60.000 0.00 0.00 0.00 5.52
242 243 0.247736 GCTATAGGATGGGGTGAGCG 59.752 60.000 1.04 0.00 0.00 5.03
243 244 0.615850 GGCTATAGGATGGGGTGAGC 59.384 60.000 1.04 0.00 0.00 4.26
244 245 0.898320 CGGCTATAGGATGGGGTGAG 59.102 60.000 1.04 0.00 0.00 3.51
245 246 1.192146 GCGGCTATAGGATGGGGTGA 61.192 60.000 1.04 0.00 0.00 4.02
246 247 1.296715 GCGGCTATAGGATGGGGTG 59.703 63.158 1.04 0.00 0.00 4.61
247 248 2.283529 CGCGGCTATAGGATGGGGT 61.284 63.158 0.00 0.00 0.00 4.95
248 249 1.982395 TCGCGGCTATAGGATGGGG 60.982 63.158 6.13 0.00 0.00 4.96
249 250 1.215647 GTCGCGGCTATAGGATGGG 59.784 63.158 1.90 0.00 0.00 4.00
250 251 1.215647 GGTCGCGGCTATAGGATGG 59.784 63.158 11.94 0.00 0.00 3.51
251 252 1.215647 GGGTCGCGGCTATAGGATG 59.784 63.158 11.94 0.00 0.00 3.51
252 253 1.982938 GGGGTCGCGGCTATAGGAT 60.983 63.158 11.94 0.00 0.00 3.24
253 254 2.599578 GGGGTCGCGGCTATAGGA 60.600 66.667 11.94 0.00 0.00 2.94
254 255 2.600769 AGGGGTCGCGGCTATAGG 60.601 66.667 11.94 0.00 0.00 2.57
255 256 2.637383 GGAGGGGTCGCGGCTATAG 61.637 68.421 11.94 0.00 0.00 1.31
256 257 2.599578 GGAGGGGTCGCGGCTATA 60.600 66.667 11.94 0.00 0.00 1.31
257 258 4.853142 TGGAGGGGTCGCGGCTAT 62.853 66.667 11.94 0.00 0.00 2.97
340 341 1.045911 AAGATGGTCGGAGGAGCTCC 61.046 60.000 26.22 26.22 46.44 4.70
341 342 0.827368 AAAGATGGTCGGAGGAGCTC 59.173 55.000 4.71 4.71 41.26 4.09
342 343 0.539051 CAAAGATGGTCGGAGGAGCT 59.461 55.000 0.00 0.00 41.26 4.09
343 344 0.462759 CCAAAGATGGTCGGAGGAGC 60.463 60.000 0.00 0.00 42.18 4.70
344 345 3.768633 CCAAAGATGGTCGGAGGAG 57.231 57.895 0.00 0.00 42.18 3.69
354 355 3.380637 CCATTCTTCTGCCTCCAAAGATG 59.619 47.826 0.00 0.00 0.00 2.90
355 356 3.011032 ACCATTCTTCTGCCTCCAAAGAT 59.989 43.478 0.00 0.00 0.00 2.40
356 357 2.376518 ACCATTCTTCTGCCTCCAAAGA 59.623 45.455 0.00 0.00 0.00 2.52
357 358 2.751806 GACCATTCTTCTGCCTCCAAAG 59.248 50.000 0.00 0.00 0.00 2.77
358 359 2.376518 AGACCATTCTTCTGCCTCCAAA 59.623 45.455 0.00 0.00 0.00 3.28
359 360 1.988107 AGACCATTCTTCTGCCTCCAA 59.012 47.619 0.00 0.00 0.00 3.53
360 361 1.661463 AGACCATTCTTCTGCCTCCA 58.339 50.000 0.00 0.00 0.00 3.86
361 362 2.797177 AAGACCATTCTTCTGCCTCC 57.203 50.000 0.00 0.00 37.55 4.30
369 370 3.107601 TCATCCTCGGAAGACCATTCTT 58.892 45.455 0.00 0.00 45.35 2.52
370 371 2.697751 CTCATCCTCGGAAGACCATTCT 59.302 50.000 0.00 0.00 35.39 2.40
371 372 2.224161 CCTCATCCTCGGAAGACCATTC 60.224 54.545 0.00 0.00 35.39 2.67
372 373 1.765314 CCTCATCCTCGGAAGACCATT 59.235 52.381 0.00 0.00 35.39 3.16
373 374 1.062886 TCCTCATCCTCGGAAGACCAT 60.063 52.381 0.00 0.00 35.39 3.55
374 375 0.335019 TCCTCATCCTCGGAAGACCA 59.665 55.000 0.00 0.00 35.39 4.02
375 376 1.342819 CATCCTCATCCTCGGAAGACC 59.657 57.143 0.00 0.00 35.39 3.85
376 377 2.311463 TCATCCTCATCCTCGGAAGAC 58.689 52.381 0.00 0.00 35.39 3.01
377 378 2.755952 TCATCCTCATCCTCGGAAGA 57.244 50.000 0.00 0.00 39.12 2.87
378 379 2.961741 TCTTCATCCTCATCCTCGGAAG 59.038 50.000 0.00 0.00 32.12 3.46
379 380 2.695666 GTCTTCATCCTCATCCTCGGAA 59.304 50.000 0.00 0.00 32.12 4.30
380 381 2.311463 GTCTTCATCCTCATCCTCGGA 58.689 52.381 0.00 0.00 0.00 4.55
381 382 1.000827 CGTCTTCATCCTCATCCTCGG 60.001 57.143 0.00 0.00 0.00 4.63
382 383 1.950216 TCGTCTTCATCCTCATCCTCG 59.050 52.381 0.00 0.00 0.00 4.63
383 384 2.295909 CCTCGTCTTCATCCTCATCCTC 59.704 54.545 0.00 0.00 0.00 3.71
384 385 2.091610 TCCTCGTCTTCATCCTCATCCT 60.092 50.000 0.00 0.00 0.00 3.24
385 386 2.035321 GTCCTCGTCTTCATCCTCATCC 59.965 54.545 0.00 0.00 0.00 3.51
386 387 2.287308 CGTCCTCGTCTTCATCCTCATC 60.287 54.545 0.00 0.00 0.00 2.92
387 388 1.678627 CGTCCTCGTCTTCATCCTCAT 59.321 52.381 0.00 0.00 0.00 2.90
388 389 1.095600 CGTCCTCGTCTTCATCCTCA 58.904 55.000 0.00 0.00 0.00 3.86
389 390 1.332375 CTCGTCCTCGTCTTCATCCTC 59.668 57.143 0.00 0.00 38.33 3.71
390 391 1.384525 CTCGTCCTCGTCTTCATCCT 58.615 55.000 0.00 0.00 38.33 3.24
391 392 0.382515 CCTCGTCCTCGTCTTCATCC 59.617 60.000 0.00 0.00 38.33 3.51
392 393 1.380524 TCCTCGTCCTCGTCTTCATC 58.619 55.000 0.00 0.00 38.33 2.92
393 394 2.060050 ATCCTCGTCCTCGTCTTCAT 57.940 50.000 0.00 0.00 38.33 2.57
394 395 1.472878 CAATCCTCGTCCTCGTCTTCA 59.527 52.381 0.00 0.00 38.33 3.02
395 396 1.743958 TCAATCCTCGTCCTCGTCTTC 59.256 52.381 0.00 0.00 38.33 2.87
396 397 1.835494 TCAATCCTCGTCCTCGTCTT 58.165 50.000 0.00 0.00 38.33 3.01
397 398 1.678627 CATCAATCCTCGTCCTCGTCT 59.321 52.381 0.00 0.00 38.33 4.18
398 399 1.405821 ACATCAATCCTCGTCCTCGTC 59.594 52.381 0.00 0.00 38.33 4.20
399 400 1.135139 CACATCAATCCTCGTCCTCGT 59.865 52.381 0.00 0.00 38.33 4.18
400 401 1.135139 ACACATCAATCCTCGTCCTCG 59.865 52.381 0.00 0.00 38.55 4.63
401 402 2.428890 AGACACATCAATCCTCGTCCTC 59.571 50.000 0.00 0.00 0.00 3.71
402 403 2.461695 AGACACATCAATCCTCGTCCT 58.538 47.619 0.00 0.00 0.00 3.85
403 404 2.969628 AGACACATCAATCCTCGTCC 57.030 50.000 0.00 0.00 0.00 4.79
404 405 4.245660 TGAAAGACACATCAATCCTCGTC 58.754 43.478 0.00 0.00 0.00 4.20
405 406 4.271696 TGAAAGACACATCAATCCTCGT 57.728 40.909 0.00 0.00 0.00 4.18
406 407 5.808042 AATGAAAGACACATCAATCCTCG 57.192 39.130 0.00 0.00 0.00 4.63
407 408 6.805271 CACAAATGAAAGACACATCAATCCTC 59.195 38.462 0.00 0.00 0.00 3.71
408 409 6.266103 ACACAAATGAAAGACACATCAATCCT 59.734 34.615 0.00 0.00 0.00 3.24
409 410 6.449698 ACACAAATGAAAGACACATCAATCC 58.550 36.000 0.00 0.00 0.00 3.01
410 411 7.365741 AGACACAAATGAAAGACACATCAATC 58.634 34.615 0.00 0.00 0.00 2.67
411 412 7.281040 AGACACAAATGAAAGACACATCAAT 57.719 32.000 0.00 0.00 0.00 2.57
412 413 6.698008 AGACACAAATGAAAGACACATCAA 57.302 33.333 0.00 0.00 0.00 2.57
413 414 6.318396 TCAAGACACAAATGAAAGACACATCA 59.682 34.615 0.00 0.00 0.00 3.07
414 415 6.728200 TCAAGACACAAATGAAAGACACATC 58.272 36.000 0.00 0.00 0.00 3.06
415 416 6.698008 TCAAGACACAAATGAAAGACACAT 57.302 33.333 0.00 0.00 0.00 3.21
416 417 6.150976 AGTTCAAGACACAAATGAAAGACACA 59.849 34.615 0.00 0.00 35.07 3.72
417 418 6.555315 AGTTCAAGACACAAATGAAAGACAC 58.445 36.000 0.00 0.00 35.07 3.67
418 419 6.757897 AGTTCAAGACACAAATGAAAGACA 57.242 33.333 0.00 0.00 35.07 3.41
419 420 7.250569 TCAAGTTCAAGACACAAATGAAAGAC 58.749 34.615 0.00 0.00 35.07 3.01
420 421 7.389803 TCAAGTTCAAGACACAAATGAAAGA 57.610 32.000 0.00 0.00 35.07 2.52
421 422 8.638685 AATCAAGTTCAAGACACAAATGAAAG 57.361 30.769 0.00 0.00 35.07 2.62
422 423 8.871862 CAAATCAAGTTCAAGACACAAATGAAA 58.128 29.630 0.00 0.00 35.07 2.69
423 424 7.010367 GCAAATCAAGTTCAAGACACAAATGAA 59.990 33.333 0.00 0.00 0.00 2.57
424 425 6.476380 GCAAATCAAGTTCAAGACACAAATGA 59.524 34.615 0.00 0.00 0.00 2.57
425 426 6.256104 TGCAAATCAAGTTCAAGACACAAATG 59.744 34.615 0.00 0.00 0.00 2.32
426 427 6.339730 TGCAAATCAAGTTCAAGACACAAAT 58.660 32.000 0.00 0.00 0.00 2.32
427 428 5.718146 TGCAAATCAAGTTCAAGACACAAA 58.282 33.333 0.00 0.00 0.00 2.83
428 429 5.321959 TGCAAATCAAGTTCAAGACACAA 57.678 34.783 0.00 0.00 0.00 3.33
429 430 4.979943 TGCAAATCAAGTTCAAGACACA 57.020 36.364 0.00 0.00 0.00 3.72
430 431 6.833342 AAATGCAAATCAAGTTCAAGACAC 57.167 33.333 0.00 0.00 0.00 3.67
431 432 7.040494 TCAAAATGCAAATCAAGTTCAAGACA 58.960 30.769 0.00 0.00 0.00 3.41
432 433 7.467557 TCAAAATGCAAATCAAGTTCAAGAC 57.532 32.000 0.00 0.00 0.00 3.01
433 434 7.765360 AGTTCAAAATGCAAATCAAGTTCAAGA 59.235 29.630 0.00 0.00 0.00 3.02
434 435 7.912383 AGTTCAAAATGCAAATCAAGTTCAAG 58.088 30.769 0.00 0.00 0.00 3.02
435 436 7.846644 AGTTCAAAATGCAAATCAAGTTCAA 57.153 28.000 0.00 0.00 0.00 2.69
436 437 7.201626 CCAAGTTCAAAATGCAAATCAAGTTCA 60.202 33.333 0.00 0.00 0.00 3.18
437 438 7.127686 CCAAGTTCAAAATGCAAATCAAGTTC 58.872 34.615 0.00 0.00 0.00 3.01
438 439 6.598850 ACCAAGTTCAAAATGCAAATCAAGTT 59.401 30.769 0.00 0.00 0.00 2.66
439 440 6.114767 ACCAAGTTCAAAATGCAAATCAAGT 58.885 32.000 0.00 0.00 0.00 3.16
440 441 6.607735 ACCAAGTTCAAAATGCAAATCAAG 57.392 33.333 0.00 0.00 0.00 3.02
441 442 6.183360 CCAACCAAGTTCAAAATGCAAATCAA 60.183 34.615 0.00 0.00 0.00 2.57
442 443 5.296283 CCAACCAAGTTCAAAATGCAAATCA 59.704 36.000 0.00 0.00 0.00 2.57
443 444 5.526846 TCCAACCAAGTTCAAAATGCAAATC 59.473 36.000 0.00 0.00 0.00 2.17
444 445 5.296531 GTCCAACCAAGTTCAAAATGCAAAT 59.703 36.000 0.00 0.00 0.00 2.32
445 446 4.633565 GTCCAACCAAGTTCAAAATGCAAA 59.366 37.500 0.00 0.00 0.00 3.68
446 447 4.187694 GTCCAACCAAGTTCAAAATGCAA 58.812 39.130 0.00 0.00 0.00 4.08
447 448 3.736433 CGTCCAACCAAGTTCAAAATGCA 60.736 43.478 0.00 0.00 0.00 3.96
448 449 2.794350 CGTCCAACCAAGTTCAAAATGC 59.206 45.455 0.00 0.00 0.00 3.56
449 450 4.300189 TCGTCCAACCAAGTTCAAAATG 57.700 40.909 0.00 0.00 0.00 2.32
450 451 4.401202 AGTTCGTCCAACCAAGTTCAAAAT 59.599 37.500 0.00 0.00 35.28 1.82
451 452 3.759618 AGTTCGTCCAACCAAGTTCAAAA 59.240 39.130 0.00 0.00 35.28 2.44
452 453 3.349022 AGTTCGTCCAACCAAGTTCAAA 58.651 40.909 0.00 0.00 35.28 2.69
453 454 2.993937 AGTTCGTCCAACCAAGTTCAA 58.006 42.857 0.00 0.00 35.28 2.69
454 455 2.680841 CAAGTTCGTCCAACCAAGTTCA 59.319 45.455 0.00 0.00 35.28 3.18
455 456 2.681344 ACAAGTTCGTCCAACCAAGTTC 59.319 45.455 0.00 0.00 35.28 3.01
456 457 2.422127 CACAAGTTCGTCCAACCAAGTT 59.578 45.455 0.00 0.00 35.28 2.66
457 458 2.014128 CACAAGTTCGTCCAACCAAGT 58.986 47.619 0.00 0.00 35.28 3.16
458 459 1.333619 CCACAAGTTCGTCCAACCAAG 59.666 52.381 0.00 0.00 35.28 3.61
459 460 1.384525 CCACAAGTTCGTCCAACCAA 58.615 50.000 0.00 0.00 35.28 3.67
460 461 0.464735 CCCACAAGTTCGTCCAACCA 60.465 55.000 0.00 0.00 35.28 3.67
461 462 0.464916 ACCCACAAGTTCGTCCAACC 60.465 55.000 0.00 0.00 35.28 3.77
462 463 2.243602 TACCCACAAGTTCGTCCAAC 57.756 50.000 0.00 0.00 34.86 3.77
463 464 2.369203 TCATACCCACAAGTTCGTCCAA 59.631 45.455 0.00 0.00 0.00 3.53
464 465 1.972075 TCATACCCACAAGTTCGTCCA 59.028 47.619 0.00 0.00 0.00 4.02
465 466 2.754946 TCATACCCACAAGTTCGTCC 57.245 50.000 0.00 0.00 0.00 4.79
466 467 5.622770 AAAATCATACCCACAAGTTCGTC 57.377 39.130 0.00 0.00 0.00 4.20
467 468 7.229907 AGTTTAAAATCATACCCACAAGTTCGT 59.770 33.333 0.00 0.00 0.00 3.85
468 469 7.590279 AGTTTAAAATCATACCCACAAGTTCG 58.410 34.615 0.00 0.00 0.00 3.95
469 470 9.191995 CAAGTTTAAAATCATACCCACAAGTTC 57.808 33.333 0.00 0.00 0.00 3.01
470 471 8.700973 ACAAGTTTAAAATCATACCCACAAGTT 58.299 29.630 0.00 0.00 0.00 2.66
471 472 8.141268 CACAAGTTTAAAATCATACCCACAAGT 58.859 33.333 0.00 0.00 0.00 3.16
472 473 7.598493 CCACAAGTTTAAAATCATACCCACAAG 59.402 37.037 0.00 0.00 0.00 3.16
473 474 7.437748 CCACAAGTTTAAAATCATACCCACAA 58.562 34.615 0.00 0.00 0.00 3.33
474 475 6.015010 CCCACAAGTTTAAAATCATACCCACA 60.015 38.462 0.00 0.00 0.00 4.17
475 476 6.394809 CCCACAAGTTTAAAATCATACCCAC 58.605 40.000 0.00 0.00 0.00 4.61
476 477 5.046950 GCCCACAAGTTTAAAATCATACCCA 60.047 40.000 0.00 0.00 0.00 4.51
477 478 5.046950 TGCCCACAAGTTTAAAATCATACCC 60.047 40.000 0.00 0.00 0.00 3.69
478 479 6.031751 TGCCCACAAGTTTAAAATCATACC 57.968 37.500 0.00 0.00 0.00 2.73
479 480 7.319646 TCATGCCCACAAGTTTAAAATCATAC 58.680 34.615 0.00 0.00 0.00 2.39
480 481 7.473735 TCATGCCCACAAGTTTAAAATCATA 57.526 32.000 0.00 0.00 0.00 2.15
481 482 6.357579 TCATGCCCACAAGTTTAAAATCAT 57.642 33.333 0.00 0.00 0.00 2.45
482 483 5.798125 TCATGCCCACAAGTTTAAAATCA 57.202 34.783 0.00 0.00 0.00 2.57
483 484 6.223120 AGTTCATGCCCACAAGTTTAAAATC 58.777 36.000 0.00 0.00 0.00 2.17
484 485 6.173427 AGTTCATGCCCACAAGTTTAAAAT 57.827 33.333 0.00 0.00 0.00 1.82
485 486 5.606348 AGTTCATGCCCACAAGTTTAAAA 57.394 34.783 0.00 0.00 0.00 1.52
486 487 5.606348 AAGTTCATGCCCACAAGTTTAAA 57.394 34.783 0.00 0.00 0.00 1.52
487 488 5.606348 AAAGTTCATGCCCACAAGTTTAA 57.394 34.783 0.00 0.00 0.00 1.52
488 489 5.606348 AAAAGTTCATGCCCACAAGTTTA 57.394 34.783 0.00 0.00 0.00 2.01
489 490 4.486125 AAAAGTTCATGCCCACAAGTTT 57.514 36.364 0.00 0.00 0.00 2.66
490 491 5.806654 ATAAAAGTTCATGCCCACAAGTT 57.193 34.783 0.00 0.00 0.00 2.66
491 492 5.304101 TGAATAAAAGTTCATGCCCACAAGT 59.696 36.000 0.00 0.00 33.41 3.16
492 493 5.782047 TGAATAAAAGTTCATGCCCACAAG 58.218 37.500 0.00 0.00 33.41 3.16
493 494 5.798125 TGAATAAAAGTTCATGCCCACAA 57.202 34.783 0.00 0.00 33.41 3.33
494 495 5.479724 TGATGAATAAAAGTTCATGCCCACA 59.520 36.000 6.84 0.00 46.02 4.17
495 496 5.964758 TGATGAATAAAAGTTCATGCCCAC 58.035 37.500 6.84 0.00 46.02 4.61
496 497 6.211184 AGTTGATGAATAAAAGTTCATGCCCA 59.789 34.615 6.84 0.00 46.02 5.36
497 498 6.633856 AGTTGATGAATAAAAGTTCATGCCC 58.366 36.000 6.84 0.00 46.02 5.36
498 499 7.599998 ACAAGTTGATGAATAAAAGTTCATGCC 59.400 33.333 10.54 0.00 46.02 4.40
499 500 8.524870 ACAAGTTGATGAATAAAAGTTCATGC 57.475 30.769 10.54 1.12 46.02 4.06
502 503 9.868277 ACAAACAAGTTGATGAATAAAAGTTCA 57.132 25.926 10.54 0.00 39.87 3.18
504 505 9.651913 ACACAAACAAGTTGATGAATAAAAGTT 57.348 25.926 10.54 0.00 39.87 2.66
505 506 9.086336 CACACAAACAAGTTGATGAATAAAAGT 57.914 29.630 10.54 0.33 39.87 2.66
506 507 9.299963 TCACACAAACAAGTTGATGAATAAAAG 57.700 29.630 10.54 0.00 39.87 2.27
507 508 9.645059 TTCACACAAACAAGTTGATGAATAAAA 57.355 25.926 10.54 1.00 39.14 1.52
508 509 9.645059 TTTCACACAAACAAGTTGATGAATAAA 57.355 25.926 10.54 6.81 41.34 1.40
509 510 9.814899 ATTTCACACAAACAAGTTGATGAATAA 57.185 25.926 10.54 1.84 41.34 1.40
510 511 9.814899 AATTTCACACAAACAAGTTGATGAATA 57.185 25.926 10.54 2.54 41.34 1.75
511 512 8.721019 AATTTCACACAAACAAGTTGATGAAT 57.279 26.923 10.54 1.64 41.34 2.57
512 513 8.545229 AAATTTCACACAAACAAGTTGATGAA 57.455 26.923 10.54 6.61 40.69 2.57
513 514 8.545229 AAAATTTCACACAAACAAGTTGATGA 57.455 26.923 10.54 0.84 39.87 2.92
539 540 9.607988 ATTCAAAATGCAATGAACATGACATAT 57.392 25.926 13.17 0.00 38.29 1.78
540 541 8.874816 CATTCAAAATGCAATGAACATGACATA 58.125 29.630 13.17 0.00 38.29 2.29
541 542 7.389330 ACATTCAAAATGCAATGAACATGACAT 59.611 29.630 13.17 1.80 38.29 3.06
542 543 6.706716 ACATTCAAAATGCAATGAACATGACA 59.293 30.769 13.17 0.00 38.29 3.58
543 544 7.124347 ACATTCAAAATGCAATGAACATGAC 57.876 32.000 13.17 0.00 38.29 3.06
544 545 7.731882 AACATTCAAAATGCAATGAACATGA 57.268 28.000 13.17 0.00 38.29 3.07
545 546 8.070769 TGAAACATTCAAAATGCAATGAACATG 58.929 29.630 13.17 11.46 38.29 3.21
546 547 8.155821 TGAAACATTCAAAATGCAATGAACAT 57.844 26.923 13.17 4.46 38.29 2.71
547 548 7.549615 TGAAACATTCAAAATGCAATGAACA 57.450 28.000 13.17 5.99 38.29 3.18
579 580 6.047870 GCATATATGGCATTTTGGACACAAA 58.952 36.000 14.51 0.00 44.40 2.83
580 581 5.128335 TGCATATATGGCATTTTGGACACAA 59.872 36.000 14.51 0.00 36.11 3.33
581 582 4.648307 TGCATATATGGCATTTTGGACACA 59.352 37.500 14.51 0.00 36.11 3.72
582 583 5.199024 TGCATATATGGCATTTTGGACAC 57.801 39.130 14.51 0.00 36.11 3.67
583 584 5.866159 TTGCATATATGGCATTTTGGACA 57.134 34.783 14.51 0.00 41.58 4.02
584 585 5.121142 GCATTGCATATATGGCATTTTGGAC 59.879 40.000 14.51 0.00 41.58 4.02
585 586 5.239351 GCATTGCATATATGGCATTTTGGA 58.761 37.500 14.51 0.00 41.58 3.53
586 587 4.393680 GGCATTGCATATATGGCATTTTGG 59.606 41.667 16.20 0.00 45.09 3.28
587 588 4.393680 GGGCATTGCATATATGGCATTTTG 59.606 41.667 20.93 2.41 46.89 2.44
588 589 4.566070 GGGGCATTGCATATATGGCATTTT 60.566 41.667 20.93 0.00 46.89 1.82
589 590 3.054948 GGGGCATTGCATATATGGCATTT 60.055 43.478 20.93 0.00 46.89 2.32
590 591 2.502538 GGGGCATTGCATATATGGCATT 59.497 45.455 20.93 6.75 46.89 3.56
591 592 2.112998 GGGGCATTGCATATATGGCAT 58.887 47.619 20.93 4.88 46.89 4.40
592 593 1.559368 GGGGCATTGCATATATGGCA 58.441 50.000 20.93 9.77 46.89 4.92
593 594 0.457035 CGGGGCATTGCATATATGGC 59.543 55.000 14.51 13.51 45.03 4.40
594 595 1.105457 CCGGGGCATTGCATATATGG 58.895 55.000 14.51 0.00 0.00 2.74
595 596 0.457035 GCCGGGGCATTGCATATATG 59.543 55.000 11.39 8.45 41.49 1.78
596 597 1.031571 CGCCGGGGCATTGCATATAT 61.032 55.000 11.39 0.00 42.06 0.86
597 598 1.673993 CGCCGGGGCATTGCATATA 60.674 57.895 11.39 0.00 42.06 0.86
598 599 2.985282 CGCCGGGGCATTGCATAT 60.985 61.111 11.39 0.00 42.06 1.78
599 600 4.182433 TCGCCGGGGCATTGCATA 62.182 61.111 14.85 0.00 42.06 3.14
646 647 0.858961 CAGTCGCGCTAAAATGCAGC 60.859 55.000 5.56 0.00 35.61 5.25
647 648 0.443869 ACAGTCGCGCTAAAATGCAG 59.556 50.000 5.56 0.00 0.00 4.41
648 649 0.871722 AACAGTCGCGCTAAAATGCA 59.128 45.000 5.56 0.00 0.00 3.96
649 650 1.250476 CAACAGTCGCGCTAAAATGC 58.750 50.000 5.56 0.00 0.00 3.56
650 651 1.463056 TCCAACAGTCGCGCTAAAATG 59.537 47.619 5.56 2.83 0.00 2.32
651 652 1.803334 TCCAACAGTCGCGCTAAAAT 58.197 45.000 5.56 0.00 0.00 1.82
652 653 1.262151 GTTCCAACAGTCGCGCTAAAA 59.738 47.619 5.56 0.00 0.00 1.52
653 654 0.863144 GTTCCAACAGTCGCGCTAAA 59.137 50.000 5.56 0.00 0.00 1.85
654 655 0.947180 GGTTCCAACAGTCGCGCTAA 60.947 55.000 5.56 0.00 0.00 3.09
655 656 1.373748 GGTTCCAACAGTCGCGCTA 60.374 57.895 5.56 0.00 0.00 4.26
656 657 2.665185 GGTTCCAACAGTCGCGCT 60.665 61.111 5.56 0.00 0.00 5.92
657 658 2.954753 CTGGTTCCAACAGTCGCGC 61.955 63.158 0.00 0.00 0.00 6.86
658 659 2.954753 GCTGGTTCCAACAGTCGCG 61.955 63.158 0.00 0.00 38.22 5.87
659 660 2.946762 GCTGGTTCCAACAGTCGC 59.053 61.111 0.00 0.00 38.22 5.19
660 661 2.954753 GCGCTGGTTCCAACAGTCG 61.955 63.158 0.00 0.00 38.22 4.18
661 662 1.598130 AGCGCTGGTTCCAACAGTC 60.598 57.895 10.39 0.00 38.22 3.51
662 663 1.893808 CAGCGCTGGTTCCAACAGT 60.894 57.895 29.88 0.00 38.22 3.55
663 664 2.620112 CCAGCGCTGGTTCCAACAG 61.620 63.158 42.09 18.15 45.53 3.16
664 665 2.594303 CCAGCGCTGGTTCCAACA 60.594 61.111 42.09 0.00 45.53 3.33
678 679 4.454717 GTTTTACGCGGCCGCCAG 62.455 66.667 42.07 31.45 38.22 4.85
681 682 4.454717 CTGGTTTTACGCGGCCGC 62.455 66.667 39.82 39.82 38.22 6.53
682 683 2.104253 ATCTGGTTTTACGCGGCCG 61.104 57.895 24.05 24.05 41.14 6.13
683 684 1.022451 TCATCTGGTTTTACGCGGCC 61.022 55.000 12.47 4.99 0.00 6.13
684 685 0.800012 TTCATCTGGTTTTACGCGGC 59.200 50.000 12.47 0.00 0.00 6.53
685 686 1.201877 CGTTCATCTGGTTTTACGCGG 60.202 52.381 12.47 0.00 0.00 6.46
686 687 1.201877 CCGTTCATCTGGTTTTACGCG 60.202 52.381 3.53 3.53 0.00 6.01
687 688 1.465187 GCCGTTCATCTGGTTTTACGC 60.465 52.381 0.00 0.00 0.00 4.42
688 689 1.801771 TGCCGTTCATCTGGTTTTACG 59.198 47.619 0.00 0.00 0.00 3.18
689 690 2.412325 CGTGCCGTTCATCTGGTTTTAC 60.412 50.000 0.00 0.00 0.00 2.01
690 691 1.801771 CGTGCCGTTCATCTGGTTTTA 59.198 47.619 0.00 0.00 0.00 1.52
691 692 0.591170 CGTGCCGTTCATCTGGTTTT 59.409 50.000 0.00 0.00 0.00 2.43
692 693 1.852067 GCGTGCCGTTCATCTGGTTT 61.852 55.000 0.00 0.00 0.00 3.27
693 694 2.325082 GCGTGCCGTTCATCTGGTT 61.325 57.895 0.00 0.00 0.00 3.67
694 695 2.742372 GCGTGCCGTTCATCTGGT 60.742 61.111 0.00 0.00 0.00 4.00
695 696 3.853330 CGCGTGCCGTTCATCTGG 61.853 66.667 0.00 0.00 0.00 3.86
696 697 3.853330 CCGCGTGCCGTTCATCTG 61.853 66.667 4.92 0.00 34.38 2.90
703 704 4.973055 TAGTTTGCCGCGTGCCGT 62.973 61.111 15.40 2.37 40.16 5.68
704 705 4.147322 CTAGTTTGCCGCGTGCCG 62.147 66.667 15.40 0.00 40.16 5.69
705 706 2.125202 AAACTAGTTTGCCGCGTGCC 62.125 55.000 19.94 0.00 40.16 5.01
706 707 0.317519 AAAACTAGTTTGCCGCGTGC 60.318 50.000 21.22 9.16 41.77 5.34
707 708 2.113910 AAAAACTAGTTTGCCGCGTG 57.886 45.000 21.22 0.00 32.36 5.34
708 709 2.350102 GCTAAAAACTAGTTTGCCGCGT 60.350 45.455 21.22 1.86 32.36 6.01
709 710 2.239201 GCTAAAAACTAGTTTGCCGCG 58.761 47.619 21.22 0.00 32.36 6.46
710 711 2.239201 CGCTAAAAACTAGTTTGCCGC 58.761 47.619 21.22 19.61 32.36 6.53
711 712 2.239201 GCGCTAAAAACTAGTTTGCCG 58.761 47.619 21.22 19.29 32.36 5.69
712 713 2.239201 CGCGCTAAAAACTAGTTTGCC 58.761 47.619 21.22 12.54 32.36 4.52
713 714 1.642360 GCGCGCTAAAAACTAGTTTGC 59.358 47.619 26.67 18.02 32.36 3.68
714 715 1.896193 CGCGCGCTAAAAACTAGTTTG 59.104 47.619 30.48 10.31 32.36 2.93
715 716 1.136169 CCGCGCGCTAAAAACTAGTTT 60.136 47.619 30.48 15.22 0.00 2.66
716 717 0.441145 CCGCGCGCTAAAAACTAGTT 59.559 50.000 30.48 1.12 0.00 2.24
717 718 1.963190 GCCGCGCGCTAAAAACTAGT 61.963 55.000 30.48 0.00 0.00 2.57
718 719 1.296649 GCCGCGCGCTAAAAACTAG 60.297 57.895 30.48 9.83 0.00 2.57
719 720 2.779987 GCCGCGCGCTAAAAACTA 59.220 55.556 30.48 0.00 0.00 2.24
736 737 2.368131 TTCAACAGCCGCGTTTCACG 62.368 55.000 4.92 0.00 45.88 4.35
737 738 0.657368 CTTCAACAGCCGCGTTTCAC 60.657 55.000 4.92 0.00 0.00 3.18
738 739 0.812014 TCTTCAACAGCCGCGTTTCA 60.812 50.000 4.92 0.00 0.00 2.69
739 740 0.517316 ATCTTCAACAGCCGCGTTTC 59.483 50.000 4.92 0.00 0.00 2.78
740 741 0.238289 CATCTTCAACAGCCGCGTTT 59.762 50.000 4.92 0.00 0.00 3.60
741 742 1.868997 CATCTTCAACAGCCGCGTT 59.131 52.632 4.92 0.00 0.00 4.84
742 743 2.680913 GCATCTTCAACAGCCGCGT 61.681 57.895 4.92 0.00 0.00 6.01
743 744 2.099062 GCATCTTCAACAGCCGCG 59.901 61.111 0.00 0.00 0.00 6.46
744 745 1.427020 GAGCATCTTCAACAGCCGC 59.573 57.895 0.00 0.00 0.00 6.53
756 757 6.794158 GCAAACGTATCAATCATTAGAGCATC 59.206 38.462 0.00 0.00 0.00 3.91
757 758 6.293626 GGCAAACGTATCAATCATTAGAGCAT 60.294 38.462 0.00 0.00 0.00 3.79
758 759 5.007626 GGCAAACGTATCAATCATTAGAGCA 59.992 40.000 0.00 0.00 0.00 4.26
759 760 5.237344 AGGCAAACGTATCAATCATTAGAGC 59.763 40.000 0.00 0.00 0.00 4.09
760 761 6.653183 CAGGCAAACGTATCAATCATTAGAG 58.347 40.000 0.00 0.00 0.00 2.43
761 762 5.007626 GCAGGCAAACGTATCAATCATTAGA 59.992 40.000 0.00 0.00 0.00 2.10
770 771 2.170738 GCAGCAGGCAAACGTATCA 58.829 52.632 0.00 0.00 43.97 2.15
782 783 0.809385 CAAGGACCTCATTGCAGCAG 59.191 55.000 0.00 0.00 30.74 4.24
806 807 4.103469 TCTGGCTCTAACTTGGGTTGTAAA 59.897 41.667 0.00 0.00 36.92 2.01
822 823 2.283529 TTGGGTCCGAGTCTGGCTC 61.284 63.158 0.00 0.00 40.77 4.70
1251 1329 2.178521 CCGTCCACCTCGAACTCG 59.821 66.667 0.00 0.00 41.45 4.18
1292 1370 3.917760 CCCTGCCGGAGATCGTCC 61.918 72.222 5.05 2.13 42.85 4.79
1524 1602 4.501714 TACATCGTCGCCACGCCC 62.502 66.667 0.00 0.00 46.28 6.13
1534 1612 0.755698 ACAGCCCGATCCTACATCGT 60.756 55.000 3.51 0.00 39.67 3.73
1551 1629 6.812656 ACGTATATGAAATCACGTAACCAACA 59.187 34.615 0.00 0.00 43.48 3.33
1682 1768 1.878070 CACGCACACCAATCATGCT 59.122 52.632 0.00 0.00 37.20 3.79
1683 1769 1.802715 GCACGCACACCAATCATGC 60.803 57.895 0.00 0.00 35.96 4.06
1684 1770 0.039346 TTGCACGCACACCAATCATG 60.039 50.000 0.00 0.00 0.00 3.07
1685 1771 0.889994 ATTGCACGCACACCAATCAT 59.110 45.000 0.00 0.00 0.00 2.45
1686 1772 0.039346 CATTGCACGCACACCAATCA 60.039 50.000 0.00 0.00 0.00 2.57
1764 1850 9.054922 AGAAGAAGAAGAAGAAGAATCACAAAG 57.945 33.333 0.00 0.00 0.00 2.77
1793 1879 7.312154 ACAATTGCACGCATTATAAAGAAGAA 58.688 30.769 5.05 0.00 0.00 2.52
1794 1880 6.851609 ACAATTGCACGCATTATAAAGAAGA 58.148 32.000 5.05 0.00 0.00 2.87
1795 1881 6.746822 TGACAATTGCACGCATTATAAAGAAG 59.253 34.615 5.05 0.00 0.00 2.85
1796 1882 6.616017 TGACAATTGCACGCATTATAAAGAA 58.384 32.000 5.05 0.00 0.00 2.52
1797 1883 6.188400 TGACAATTGCACGCATTATAAAGA 57.812 33.333 5.05 0.00 0.00 2.52
1798 1884 8.732413 ATATGACAATTGCACGCATTATAAAG 57.268 30.769 5.05 0.00 0.00 1.85
1799 1885 9.526713 AAATATGACAATTGCACGCATTATAAA 57.473 25.926 5.05 0.00 0.00 1.40
1800 1886 9.526713 AAAATATGACAATTGCACGCATTATAA 57.473 25.926 5.05 0.00 0.00 0.98
1801 1887 8.966194 CAAAATATGACAATTGCACGCATTATA 58.034 29.630 5.05 0.00 0.00 0.98
1802 1888 7.517101 GCAAAATATGACAATTGCACGCATTAT 60.517 33.333 5.05 0.00 45.61 1.28
1803 1889 6.237781 GCAAAATATGACAATTGCACGCATTA 60.238 34.615 5.05 0.00 45.61 1.90
1902 1988 9.999660 CTAGTAAAAATAATACTTCCTCCTCCC 57.000 37.037 0.00 0.00 35.34 4.30
2054 2144 1.002274 CCTCTCTGGCCACCTACCT 59.998 63.158 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.