Multiple sequence alignment - TraesCS1A01G263200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G263200 chr1A 100.000 7644 0 0 1 7644 458555890 458563533 0.000000e+00 14116.0
1 TraesCS1A01G263200 chr1A 96.055 507 17 2 1 506 458546518 458547022 0.000000e+00 822.0
2 TraesCS1A01G263200 chr1A 95.257 506 21 3 3 506 1182608 1183112 0.000000e+00 798.0
3 TraesCS1A01G263200 chr1A 94.892 509 23 3 1 507 497168867 497169374 0.000000e+00 793.0
4 TraesCS1A01G263200 chr1A 94.882 508 23 3 1 506 95133728 95134234 0.000000e+00 791.0
5 TraesCS1A01G263200 chr1A 94.882 508 23 3 1 506 497159300 497159806 0.000000e+00 791.0
6 TraesCS1A01G263200 chr1A 94.685 508 24 3 1 506 38386982 38386476 0.000000e+00 785.0
7 TraesCS1A01G263200 chr1A 94.685 508 24 3 1 506 216482310 216481804 0.000000e+00 785.0
8 TraesCS1A01G263200 chr1A 95.506 89 3 1 2362 2449 458558149 458558061 2.880000e-29 141.0
9 TraesCS1A01G263200 chr1A 97.436 78 2 0 2369 2446 66770246 66770169 4.810000e-27 134.0
10 TraesCS1A01G263200 chr1D 96.599 2529 79 5 2480 5005 357450889 357453413 0.000000e+00 4187.0
11 TraesCS1A01G263200 chr1D 91.921 1770 82 27 5001 6749 357453442 357455171 0.000000e+00 2420.0
12 TraesCS1A01G263200 chr1D 85.759 1285 73 38 712 1939 357449143 357450374 0.000000e+00 1258.0
13 TraesCS1A01G263200 chr1D 96.269 134 5 0 2172 2305 469018691 469018558 3.590000e-53 220.0
14 TraesCS1A01G263200 chr1D 97.753 89 2 0 2014 2102 357450626 357450714 3.690000e-33 154.0
15 TraesCS1A01G263200 chr1D 94.521 73 3 1 2105 2177 357450743 357450814 2.250000e-20 111.0
16 TraesCS1A01G263200 chr1B 96.524 2532 74 9 2480 5005 480837756 480840279 0.000000e+00 4176.0
17 TraesCS1A01G263200 chr1B 92.724 1608 65 17 5001 6577 480840312 480841898 0.000000e+00 2274.0
18 TraesCS1A01G263200 chr1B 87.202 1719 88 58 548 2183 480836021 480837690 0.000000e+00 1834.0
19 TraesCS1A01G263200 chr1B 90.108 465 32 9 6569 7029 480845395 480845849 6.610000e-165 592.0
20 TraesCS1A01G263200 chr1B 84.459 444 58 8 7208 7644 480847792 480848231 1.970000e-115 427.0
21 TraesCS1A01G263200 chr1B 95.070 142 6 1 2167 2307 270318576 270318435 9.980000e-54 222.0
22 TraesCS1A01G263200 chr6A 95.580 724 32 0 2547 3270 320261572 320262295 0.000000e+00 1160.0
23 TraesCS1A01G263200 chr7A 94.695 509 24 3 1 507 481033718 481034225 0.000000e+00 787.0
24 TraesCS1A01G263200 chr7A 94.928 138 7 0 2171 2308 2582140 2582003 4.640000e-52 217.0
25 TraesCS1A01G263200 chr7A 91.503 153 10 2 2179 2330 454048958 454049108 2.800000e-49 207.0
26 TraesCS1A01G263200 chr7A 96.875 32 0 1 2331 2361 628243013 628243044 1.400000e-02 52.8
27 TraesCS1A01G263200 chr4A 94.695 509 23 4 1 507 484845674 484845168 0.000000e+00 787.0
28 TraesCS1A01G263200 chr4A 89.394 66 7 0 7492 7557 114737441 114737506 4.920000e-12 84.2
29 TraesCS1A01G263200 chr2A 90.748 508 26 15 507 1003 755924212 755924709 0.000000e+00 658.0
30 TraesCS1A01G263200 chr3A 99.057 212 2 0 3059 3270 731696695 731696906 1.560000e-101 381.0
31 TraesCS1A01G263200 chr3A 93.023 215 12 2 2644 2857 731696489 731696701 2.070000e-80 311.0
32 TraesCS1A01G263200 chr2D 95.105 143 7 0 2166 2308 62293436 62293294 7.720000e-55 226.0
33 TraesCS1A01G263200 chr5B 95.620 137 4 2 2171 2307 431062129 431061995 1.290000e-52 219.0
34 TraesCS1A01G263200 chr6D 95.556 135 6 0 2171 2305 95896104 95895970 4.640000e-52 217.0
35 TraesCS1A01G263200 chr6D 93.750 144 9 0 2166 2309 295604171 295604314 4.640000e-52 217.0
36 TraesCS1A01G263200 chr3B 92.258 155 9 3 2168 2320 277029344 277029191 4.640000e-52 217.0
37 TraesCS1A01G263200 chr3B 96.341 82 3 0 2362 2443 355437398 355437317 1.340000e-27 135.0
38 TraesCS1A01G263200 chr3B 87.611 113 11 2 2334 2446 84977611 84977720 2.240000e-25 128.0
39 TraesCS1A01G263200 chr7B 94.382 89 4 1 2362 2450 46995829 46995916 1.340000e-27 135.0
40 TraesCS1A01G263200 chr7B 92.473 93 5 2 2361 2453 534582992 534583082 1.730000e-26 132.0
41 TraesCS1A01G263200 chr5D 96.341 82 3 0 2362 2443 469425043 469425124 1.340000e-27 135.0
42 TraesCS1A01G263200 chr5A 94.253 87 3 2 2362 2447 607836722 607836807 1.730000e-26 132.0
43 TraesCS1A01G263200 chr4B 87.719 114 10 3 2337 2446 564593969 564593856 6.220000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G263200 chr1A 458555890 458563533 7643 False 14116.0 14116 100.0000 1 7644 1 chr1A.!!$F4 7643
1 TraesCS1A01G263200 chr1A 458546518 458547022 504 False 822.0 822 96.0550 1 506 1 chr1A.!!$F3 505
2 TraesCS1A01G263200 chr1A 1182608 1183112 504 False 798.0 798 95.2570 3 506 1 chr1A.!!$F1 503
3 TraesCS1A01G263200 chr1A 497168867 497169374 507 False 793.0 793 94.8920 1 507 1 chr1A.!!$F6 506
4 TraesCS1A01G263200 chr1A 95133728 95134234 506 False 791.0 791 94.8820 1 506 1 chr1A.!!$F2 505
5 TraesCS1A01G263200 chr1A 497159300 497159806 506 False 791.0 791 94.8820 1 506 1 chr1A.!!$F5 505
6 TraesCS1A01G263200 chr1A 38386476 38386982 506 True 785.0 785 94.6850 1 506 1 chr1A.!!$R1 505
7 TraesCS1A01G263200 chr1A 216481804 216482310 506 True 785.0 785 94.6850 1 506 1 chr1A.!!$R3 505
8 TraesCS1A01G263200 chr1D 357449143 357455171 6028 False 1626.0 4187 93.3106 712 6749 5 chr1D.!!$F1 6037
9 TraesCS1A01G263200 chr1B 480836021 480848231 12210 False 1860.6 4176 90.2034 548 7644 5 chr1B.!!$F1 7096
10 TraesCS1A01G263200 chr6A 320261572 320262295 723 False 1160.0 1160 95.5800 2547 3270 1 chr6A.!!$F1 723
11 TraesCS1A01G263200 chr7A 481033718 481034225 507 False 787.0 787 94.6950 1 507 1 chr7A.!!$F2 506
12 TraesCS1A01G263200 chr4A 484845168 484845674 506 True 787.0 787 94.6950 1 507 1 chr4A.!!$R1 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 518 0.036294 GGGTGTTACAGAGGTGGAGC 60.036 60.000 0.00 0.00 0.00 4.70 F
2309 2613 0.033306 GGGACGGAGGGAGTAGTTCT 60.033 60.000 0.00 0.00 0.00 3.01 F
4156 4541 0.609131 CACGGAACCCTGCTGGAATT 60.609 55.000 11.88 5.01 38.00 2.17 F
4619 5007 0.107643 TGATGTTGTCACCCTGCGAA 59.892 50.000 0.00 0.00 0.00 4.70 F
4734 5122 1.228245 GCCCTGTTGCCAGAGACAA 60.228 57.895 0.00 0.00 41.50 3.18 F
5601 6038 1.775039 GAGCGTGTCAGTTGCTGCAA 61.775 55.000 11.69 11.69 39.49 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 2594 0.033306 AGAACTACTCCCTCCGTCCC 60.033 60.0 0.00 0.0 0.00 4.46 R
4161 4546 0.033011 AGTAGAGGGGCGACATGAGT 60.033 55.0 0.00 0.0 0.00 3.41 R
5588 6016 0.039708 GCTTCCTTGCAGCAACTGAC 60.040 55.0 2.83 0.0 37.22 3.51 R
5764 6202 0.179078 CATCTCTGCCTCTCTGGTGC 60.179 60.0 0.00 0.0 38.35 5.01 R
6354 6809 0.533755 GGATGATGCTTAGGCTGCGT 60.534 55.0 0.00 0.0 39.59 5.24 R
6821 10796 0.251742 TGGGGTTCCTTTGCATCCTG 60.252 55.0 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 4.805140 ACACTCTAGATGATGGAGAGGA 57.195 45.455 0.00 0.00 40.91 3.71
167 168 5.631026 CATCAAACGAAGTCCAAATGGTAG 58.369 41.667 0.00 0.00 45.00 3.18
293 295 2.567049 CGGAGGAGAACGAAGCGT 59.433 61.111 0.00 0.00 43.97 5.07
507 510 3.035055 TCATATCCGGGGTGTTACAGA 57.965 47.619 0.00 0.00 0.00 3.41
508 511 2.963101 TCATATCCGGGGTGTTACAGAG 59.037 50.000 0.00 0.00 0.00 3.35
509 512 1.784358 TATCCGGGGTGTTACAGAGG 58.216 55.000 0.00 0.00 0.00 3.69
510 513 0.252558 ATCCGGGGTGTTACAGAGGT 60.253 55.000 0.00 0.00 0.00 3.85
511 514 1.189524 TCCGGGGTGTTACAGAGGTG 61.190 60.000 0.00 0.00 0.00 4.00
512 515 1.295423 CGGGGTGTTACAGAGGTGG 59.705 63.158 0.00 0.00 0.00 4.61
513 516 1.189524 CGGGGTGTTACAGAGGTGGA 61.190 60.000 0.00 0.00 0.00 4.02
514 517 0.613777 GGGGTGTTACAGAGGTGGAG 59.386 60.000 0.00 0.00 0.00 3.86
515 518 0.036294 GGGTGTTACAGAGGTGGAGC 60.036 60.000 0.00 0.00 0.00 4.70
516 519 0.977395 GGTGTTACAGAGGTGGAGCT 59.023 55.000 0.00 0.00 0.00 4.09
517 520 1.066787 GGTGTTACAGAGGTGGAGCTC 60.067 57.143 4.71 4.71 0.00 4.09
518 521 0.888619 TGTTACAGAGGTGGAGCTCG 59.111 55.000 7.83 0.00 0.00 5.03
519 522 0.173708 GTTACAGAGGTGGAGCTCGG 59.826 60.000 7.83 4.70 0.00 4.63
520 523 1.605058 TTACAGAGGTGGAGCTCGGC 61.605 60.000 7.83 2.45 0.00 5.54
521 524 2.781431 TACAGAGGTGGAGCTCGGCA 62.781 60.000 7.83 0.00 0.00 5.69
522 525 3.073735 AGAGGTGGAGCTCGGCAG 61.074 66.667 7.83 0.00 0.00 4.85
523 526 4.154347 GAGGTGGAGCTCGGCAGG 62.154 72.222 7.83 0.00 0.00 4.85
525 528 4.767255 GGTGGAGCTCGGCAGGTG 62.767 72.222 7.83 0.00 0.00 4.00
544 547 2.113139 CACTGCGGTGGTTCCCTT 59.887 61.111 18.43 0.00 39.59 3.95
545 548 1.528309 CACTGCGGTGGTTCCCTTT 60.528 57.895 18.43 0.00 39.59 3.11
546 549 1.228154 ACTGCGGTGGTTCCCTTTC 60.228 57.895 0.00 0.00 0.00 2.62
547 550 1.228124 CTGCGGTGGTTCCCTTTCA 60.228 57.895 0.00 0.00 0.00 2.69
548 551 1.228124 TGCGGTGGTTCCCTTTCAG 60.228 57.895 0.00 0.00 0.00 3.02
549 552 1.228154 GCGGTGGTTCCCTTTCAGT 60.228 57.895 0.00 0.00 0.00 3.41
550 553 1.235281 GCGGTGGTTCCCTTTCAGTC 61.235 60.000 0.00 0.00 0.00 3.51
565 568 5.355350 CCTTTCAGTCTTTTCATAGCCGAAT 59.645 40.000 0.00 0.00 0.00 3.34
569 572 8.506168 TTCAGTCTTTTCATAGCCGAATATTT 57.494 30.769 0.00 0.00 0.00 1.40
579 582 4.732285 AGCCGAATATTTGTATTGCTCG 57.268 40.909 1.99 0.00 0.00 5.03
586 589 6.292649 CGAATATTTGTATTGCTCGCACCTAA 60.293 38.462 0.00 0.00 0.00 2.69
592 595 0.901827 TTGCTCGCACCTAATCTGGA 59.098 50.000 0.00 0.00 0.00 3.86
597 600 3.378427 GCTCGCACCTAATCTGGATTTTT 59.622 43.478 1.01 0.00 32.50 1.94
669 677 6.945435 ACCACAGTTCACATTACATAAATCCA 59.055 34.615 0.00 0.00 0.00 3.41
710 728 1.140134 ACAATAGGGTGTGGCCAGGT 61.140 55.000 5.11 0.00 39.65 4.00
718 756 2.370519 GGGTGTGGCCAGGTTTTATTTT 59.629 45.455 5.11 0.00 39.65 1.82
727 765 8.556194 GTGGCCAGGTTTTATTTTAAAAAGAAG 58.444 33.333 5.11 0.00 0.00 2.85
778 816 6.416514 CAACGGTTAGTAAAACTTGACACTC 58.583 40.000 0.00 0.00 0.00 3.51
779 817 5.663456 ACGGTTAGTAAAACTTGACACTCA 58.337 37.500 0.00 0.00 0.00 3.41
780 818 5.521372 ACGGTTAGTAAAACTTGACACTCAC 59.479 40.000 0.00 0.00 0.00 3.51
781 819 5.751990 CGGTTAGTAAAACTTGACACTCACT 59.248 40.000 0.00 0.00 0.00 3.41
782 820 6.074463 CGGTTAGTAAAACTTGACACTCACTC 60.074 42.308 0.00 0.00 0.00 3.51
783 821 6.759827 GGTTAGTAAAACTTGACACTCACTCA 59.240 38.462 0.00 0.00 0.00 3.41
896 934 2.511373 CCCGTCGCAGCAGCAATA 60.511 61.111 0.82 0.00 42.27 1.90
897 935 2.106074 CCCGTCGCAGCAGCAATAA 61.106 57.895 0.82 0.00 42.27 1.40
898 936 1.643868 CCCGTCGCAGCAGCAATAAA 61.644 55.000 0.82 0.00 42.27 1.40
903 958 1.869132 GCAGCAGCAATAAACGCCG 60.869 57.895 0.00 0.00 41.58 6.46
935 990 4.142687 CGCGGTAGAAACAAATCAAATCCT 60.143 41.667 0.00 0.00 0.00 3.24
949 1017 5.574891 TCAAATCCTCTCTCTCTCTTTCG 57.425 43.478 0.00 0.00 0.00 3.46
951 1019 3.662759 ATCCTCTCTCTCTCTTTCGGT 57.337 47.619 0.00 0.00 0.00 4.69
985 1054 2.866028 CAAAGCCAGAGCGCAGAC 59.134 61.111 11.47 0.00 46.67 3.51
1012 1081 3.443925 CGCTCGCCACCAGAGAGA 61.444 66.667 0.00 0.00 37.67 3.10
1015 1084 1.515020 CTCGCCACCAGAGAGAAGG 59.485 63.158 0.00 0.00 37.93 3.46
1025 1094 2.762043 AGAGAAGGGAGAGCGGGC 60.762 66.667 0.00 0.00 0.00 6.13
1052 1121 2.328099 CCCACAGTTCTTGCTCGCC 61.328 63.158 0.00 0.00 0.00 5.54
1054 1123 2.032681 ACAGTTCTTGCTCGCCCC 59.967 61.111 0.00 0.00 0.00 5.80
1055 1124 2.032528 CAGTTCTTGCTCGCCCCA 59.967 61.111 0.00 0.00 0.00 4.96
1081 1150 4.880426 TCCCTCCCCCGGATCTGC 62.880 72.222 0.73 0.00 0.00 4.26
1200 1269 0.321653 CCGCAGCTACACTTTCCCTT 60.322 55.000 0.00 0.00 0.00 3.95
1201 1270 1.079503 CGCAGCTACACTTTCCCTTC 58.920 55.000 0.00 0.00 0.00 3.46
1202 1271 1.338200 CGCAGCTACACTTTCCCTTCT 60.338 52.381 0.00 0.00 0.00 2.85
1203 1272 2.351455 GCAGCTACACTTTCCCTTCTC 58.649 52.381 0.00 0.00 0.00 2.87
1204 1273 2.937433 GCAGCTACACTTTCCCTTCTCC 60.937 54.545 0.00 0.00 0.00 3.71
1207 1276 2.093394 GCTACACTTTCCCTTCTCCTCC 60.093 54.545 0.00 0.00 0.00 4.30
1222 1291 0.327000 CCTCCCCTCTCCACCATCTT 60.327 60.000 0.00 0.00 0.00 2.40
1223 1292 0.835941 CTCCCCTCTCCACCATCTTG 59.164 60.000 0.00 0.00 0.00 3.02
1224 1293 0.119155 TCCCCTCTCCACCATCTTGT 59.881 55.000 0.00 0.00 0.00 3.16
1225 1294 1.364678 TCCCCTCTCCACCATCTTGTA 59.635 52.381 0.00 0.00 0.00 2.41
1226 1295 1.486726 CCCCTCTCCACCATCTTGTAC 59.513 57.143 0.00 0.00 0.00 2.90
1227 1296 2.472029 CCCTCTCCACCATCTTGTACT 58.528 52.381 0.00 0.00 0.00 2.73
1271 1340 3.470888 CCTACCCCAGGCTCCACG 61.471 72.222 0.00 0.00 37.70 4.94
1450 1531 1.641577 GCGTCGCTTTCTTGAGGTAT 58.358 50.000 10.68 0.00 0.00 2.73
1455 1536 1.936547 CGCTTTCTTGAGGTATGAGCC 59.063 52.381 0.00 0.00 0.00 4.70
1472 1554 2.238395 GAGCCTTTTCTCCTCCTGTGAT 59.762 50.000 0.00 0.00 0.00 3.06
1477 1559 5.776744 CCTTTTCTCCTCCTGTGATTTTTG 58.223 41.667 0.00 0.00 0.00 2.44
1504 1586 6.919721 TGCTTAAACCCAAACTGATTGATAC 58.080 36.000 0.00 0.00 41.85 2.24
1620 1703 6.401153 CCTTCAAAAGTTTCTAGATTCGGTCG 60.401 42.308 0.00 0.00 0.00 4.79
1664 1755 0.404426 GGGGTAGGGTTTTCAGCAGT 59.596 55.000 0.00 0.00 0.00 4.40
1693 1784 1.135972 CCATTCGTTCTTGCAGTTCCG 60.136 52.381 0.00 0.00 0.00 4.30
1733 1824 4.739716 TGAGTTCTTTGCGCATTTCTTTTC 59.260 37.500 12.75 5.10 0.00 2.29
1734 1825 4.051237 AGTTCTTTGCGCATTTCTTTTCC 58.949 39.130 12.75 0.00 0.00 3.13
1735 1826 2.660490 TCTTTGCGCATTTCTTTTCCG 58.340 42.857 12.75 0.00 0.00 4.30
1755 1855 3.066900 CCGAATTGTCACTCGTATCCTCT 59.933 47.826 3.53 0.00 33.17 3.69
1760 1860 5.562506 TTGTCACTCGTATCCTCTAGTTG 57.437 43.478 0.00 0.00 0.00 3.16
1788 1888 9.475620 AAGAACTTATCTTGGTTATTTTAGGGG 57.524 33.333 0.00 0.00 46.71 4.79
2020 2298 6.438186 TCAGCAGGATGATTGGTGATATTA 57.562 37.500 3.29 0.00 45.15 0.98
2111 2415 0.110486 AGATGCCACTGTCGGGTTTT 59.890 50.000 0.00 0.00 0.00 2.43
2187 2491 7.421087 AAAAACACTAGATAGTACTCCCTCC 57.579 40.000 0.00 0.00 34.13 4.30
2188 2492 4.354893 ACACTAGATAGTACTCCCTCCG 57.645 50.000 0.00 0.00 34.13 4.63
2189 2493 3.715834 ACACTAGATAGTACTCCCTCCGT 59.284 47.826 0.00 0.00 34.13 4.69
2190 2494 4.202346 ACACTAGATAGTACTCCCTCCGTC 60.202 50.000 0.00 0.00 34.13 4.79
2191 2495 2.955342 AGATAGTACTCCCTCCGTCC 57.045 55.000 0.00 0.00 0.00 4.79
2192 2496 1.424684 AGATAGTACTCCCTCCGTCCC 59.575 57.143 0.00 0.00 0.00 4.46
2193 2497 1.144503 GATAGTACTCCCTCCGTCCCA 59.855 57.143 0.00 0.00 0.00 4.37
2194 2498 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
2195 2499 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2196 2500 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
2197 2501 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
2198 2502 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2199 2503 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2200 2504 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2201 2505 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2202 2506 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2203 2507 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2204 2508 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2205 2509 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2206 2510 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2207 2511 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2208 2512 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2209 2513 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2210 2514 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2211 2515 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2212 2516 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2213 2517 8.726988 CGTCCCAAAATTCTTGTCTTAGATTTA 58.273 33.333 0.00 0.00 0.00 1.40
2261 2565 7.989826 ACTAAAACGTAACTAGATACATCCGT 58.010 34.615 10.40 0.16 0.00 4.69
2262 2566 9.109393 ACTAAAACGTAACTAGATACATCCGTA 57.891 33.333 10.40 0.00 0.00 4.02
2265 2569 9.807649 AAAACGTAACTAGATACATCCGTATTT 57.192 29.630 10.40 4.25 38.48 1.40
2268 2572 9.494271 ACGTAACTAGATACATCCGTATTTAGA 57.506 33.333 13.92 0.00 41.85 2.10
2269 2573 9.752274 CGTAACTAGATACATCCGTATTTAGAC 57.248 37.037 13.92 5.26 41.85 2.59
2292 2596 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
2293 2597 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
2294 2598 9.325198 ACAAATTTAAGACAAGAATTTTGGGAC 57.675 29.630 0.00 0.00 33.39 4.46
2295 2599 8.487176 CAAATTTAAGACAAGAATTTTGGGACG 58.513 33.333 0.00 0.00 32.35 4.79
2296 2600 5.699097 TTAAGACAAGAATTTTGGGACGG 57.301 39.130 0.00 0.00 0.00 4.79
2297 2601 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2298 2602 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2299 2603 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2300 2604 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2301 2605 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2302 2606 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2303 2607 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
2304 2608 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2305 2609 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
2306 2610 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
2307 2611 0.115745 TTGGGACGGAGGGAGTAGTT 59.884 55.000 0.00 0.00 0.00 2.24
2308 2612 0.324091 TGGGACGGAGGGAGTAGTTC 60.324 60.000 0.00 0.00 0.00 3.01
2309 2613 0.033306 GGGACGGAGGGAGTAGTTCT 60.033 60.000 0.00 0.00 0.00 3.01
2310 2614 1.213926 GGGACGGAGGGAGTAGTTCTA 59.786 57.143 0.00 0.00 0.00 2.10
2311 2615 2.357569 GGGACGGAGGGAGTAGTTCTAA 60.358 54.545 0.00 0.00 0.00 2.10
2312 2616 3.359950 GGACGGAGGGAGTAGTTCTAAA 58.640 50.000 0.00 0.00 0.00 1.85
2313 2617 3.766051 GGACGGAGGGAGTAGTTCTAAAA 59.234 47.826 0.00 0.00 0.00 1.52
2314 2618 4.221482 GGACGGAGGGAGTAGTTCTAAAAA 59.779 45.833 0.00 0.00 0.00 1.94
2336 2640 6.973229 AAAGCATCCGTTTTAGTATTACGT 57.027 33.333 0.00 0.00 33.68 3.57
2337 2641 6.973229 AAGCATCCGTTTTAGTATTACGTT 57.027 33.333 0.00 0.00 33.68 3.99
2338 2642 6.973229 AGCATCCGTTTTAGTATTACGTTT 57.027 33.333 0.00 0.00 33.68 3.60
2339 2643 7.368480 AGCATCCGTTTTAGTATTACGTTTT 57.632 32.000 0.00 0.00 33.68 2.43
2340 2644 8.477984 AGCATCCGTTTTAGTATTACGTTTTA 57.522 30.769 0.00 0.00 33.68 1.52
2341 2645 8.598075 AGCATCCGTTTTAGTATTACGTTTTAG 58.402 33.333 0.00 0.00 33.68 1.85
2342 2646 8.382875 GCATCCGTTTTAGTATTACGTTTTAGT 58.617 33.333 0.00 0.00 33.68 2.24
2359 2663 9.455847 ACGTTTTAGTATTAGATACATCCGTTC 57.544 33.333 1.42 0.00 38.21 3.95
2360 2664 9.674824 CGTTTTAGTATTAGATACATCCGTTCT 57.325 33.333 1.42 0.00 38.21 3.01
2362 2666 9.976511 TTTTAGTATTAGATACATCCGTTCTGG 57.023 33.333 1.42 0.00 38.21 3.86
2363 2667 8.929260 TTAGTATTAGATACATCCGTTCTGGA 57.071 34.615 1.42 0.00 41.44 3.86
2373 2677 3.367646 TCCGTTCTGGATGACTCTAGT 57.632 47.619 0.00 0.00 43.74 2.57
2374 2678 3.698289 TCCGTTCTGGATGACTCTAGTT 58.302 45.455 0.00 0.00 43.74 2.24
2375 2679 4.851843 TCCGTTCTGGATGACTCTAGTTA 58.148 43.478 0.00 0.00 43.74 2.24
2376 2680 4.639310 TCCGTTCTGGATGACTCTAGTTAC 59.361 45.833 0.00 0.00 43.74 2.50
2377 2681 4.496010 CCGTTCTGGATGACTCTAGTTACG 60.496 50.000 0.00 0.00 42.00 3.18
2378 2682 4.094590 CGTTCTGGATGACTCTAGTTACGT 59.905 45.833 0.00 0.00 36.00 3.57
2379 2683 5.391736 CGTTCTGGATGACTCTAGTTACGTT 60.392 44.000 0.00 0.00 36.00 3.99
2380 2684 6.388278 GTTCTGGATGACTCTAGTTACGTTT 58.612 40.000 0.00 0.00 32.15 3.60
2381 2685 6.585695 TCTGGATGACTCTAGTTACGTTTT 57.414 37.500 0.00 0.00 32.15 2.43
2382 2686 7.692460 TCTGGATGACTCTAGTTACGTTTTA 57.308 36.000 0.00 0.00 32.15 1.52
2383 2687 7.759465 TCTGGATGACTCTAGTTACGTTTTAG 58.241 38.462 0.00 0.00 32.15 1.85
2384 2688 7.392673 TCTGGATGACTCTAGTTACGTTTTAGT 59.607 37.037 0.00 0.00 32.15 2.24
2385 2689 8.565896 TGGATGACTCTAGTTACGTTTTAGTA 57.434 34.615 0.00 0.00 0.00 1.82
2386 2690 9.182214 TGGATGACTCTAGTTACGTTTTAGTAT 57.818 33.333 0.00 0.00 0.00 2.12
2433 2737 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2434 2738 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2435 2739 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2436 2740 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2437 2741 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2438 2742 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2439 2743 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2440 2744 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2441 2745 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
2442 2746 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2448 2752 1.213926 GGGACGGAGGGAGTAGTTCTA 59.786 57.143 0.00 0.00 0.00 2.10
2503 2881 5.126067 TCTTCTTATGCTTATGGCTGGTTC 58.874 41.667 0.00 0.00 42.39 3.62
2545 2926 6.035843 AGTTTAATGAATTAGGCACGCAATG 58.964 36.000 0.00 0.00 0.00 2.82
2614 2995 4.590647 TGAGGAATCATCTGGACAGGATAC 59.409 45.833 0.00 0.00 0.00 2.24
2615 2996 3.906846 AGGAATCATCTGGACAGGATACC 59.093 47.826 0.00 0.00 37.17 2.73
2701 3082 9.320295 CCTGGATTATAATAAAAGGGCCAATTA 57.680 33.333 6.18 4.76 0.00 1.40
2924 3306 4.439253 AGTAGTCTGAACCAGGCTTTTT 57.561 40.909 6.39 0.00 44.67 1.94
2925 3307 5.562298 AGTAGTCTGAACCAGGCTTTTTA 57.438 39.130 6.39 0.00 44.67 1.52
2993 3377 9.658799 CCTTTGTCAATAATCTCACTCTTCTTA 57.341 33.333 0.00 0.00 0.00 2.10
3420 3804 5.366460 ACAAGGATCACAATGAGAGCATAG 58.634 41.667 0.00 0.00 33.44 2.23
3489 3873 4.331968 ACAGATAATTGGCGAAGAAACCA 58.668 39.130 0.00 0.00 0.00 3.67
3512 3896 6.384224 CAGAGAAAATGCAAGCAGTGATAAA 58.616 36.000 0.00 0.00 0.00 1.40
3543 3927 4.978083 AAATGTGGTCAAGATGATCTGC 57.022 40.909 0.00 0.00 0.00 4.26
3669 4053 9.689976 CTTCTAGTTATAATCCTGATCACACAG 57.310 37.037 0.00 0.00 37.61 3.66
3725 4109 8.496751 GTCTGGTGTTTATCTTGTTAGAACTTC 58.503 37.037 0.00 0.00 33.20 3.01
3871 4256 5.695851 ATGTCACAGAACAGGAACATTTC 57.304 39.130 0.00 0.00 31.50 2.17
4117 4502 3.307906 TCCACCAGGGAACGACGG 61.308 66.667 0.00 0.00 44.80 4.79
4156 4541 0.609131 CACGGAACCCTGCTGGAATT 60.609 55.000 11.88 5.01 38.00 2.17
4161 4546 2.446435 GAACCCTGCTGGAATTGCTAA 58.554 47.619 11.88 0.00 38.00 3.09
4215 4600 3.289797 CCACTAGAGACCTGGCAGA 57.710 57.895 17.94 0.00 0.00 4.26
4318 4703 1.808390 CAACGTAGCTACCCCACGC 60.808 63.158 18.16 0.00 39.23 5.34
4438 4823 0.605319 TTACCACCAAAGAGCCAGCG 60.605 55.000 0.00 0.00 0.00 5.18
4508 4896 2.496817 GCCCTACACGCAGAGAGG 59.503 66.667 0.00 0.00 0.00 3.69
4510 4898 1.035932 GCCCTACACGCAGAGAGGTA 61.036 60.000 0.00 0.00 0.00 3.08
4555 4943 2.092753 CAGTCCATGTTGGCCATCTAGT 60.093 50.000 6.09 0.00 37.47 2.57
4566 4954 1.679944 GCCATCTAGTGCTGAAAGGCA 60.680 52.381 0.00 0.00 38.06 4.75
4618 5006 0.320683 CTGATGTTGTCACCCTGCGA 60.321 55.000 0.00 0.00 32.22 5.10
4619 5007 0.107643 TGATGTTGTCACCCTGCGAA 59.892 50.000 0.00 0.00 0.00 4.70
4734 5122 1.228245 GCCCTGTTGCCAGAGACAA 60.228 57.895 0.00 0.00 41.50 3.18
4891 5279 3.420893 TGTTGCCAAAGAGAATACCCTG 58.579 45.455 0.00 0.00 0.00 4.45
4998 5386 5.277250 TCCCTTCTCTCACCATAACACATA 58.723 41.667 0.00 0.00 0.00 2.29
5118 5543 6.102663 CAGAGATGAAAAGGTACCAGTACAG 58.897 44.000 15.94 0.00 37.78 2.74
5212 5637 6.480651 GCTATGCTAAGGAAAGGTTAGAACTC 59.519 42.308 0.00 0.00 30.21 3.01
5464 5889 4.221703 TCATTCGGTGCCATTGGTTATTTT 59.778 37.500 4.26 0.00 0.00 1.82
5495 5920 4.925054 GCATTGTGCTCATTTTCTTGCTAA 59.075 37.500 0.00 0.00 40.96 3.09
5496 5921 5.061808 GCATTGTGCTCATTTTCTTGCTAAG 59.938 40.000 0.00 0.00 40.96 2.18
5497 5922 4.164822 TGTGCTCATTTTCTTGCTAAGC 57.835 40.909 0.00 0.00 0.00 3.09
5498 5923 3.822735 TGTGCTCATTTTCTTGCTAAGCT 59.177 39.130 0.00 0.00 0.00 3.74
5499 5924 4.164294 GTGCTCATTTTCTTGCTAAGCTG 58.836 43.478 0.00 0.00 0.00 4.24
5500 5925 4.074259 TGCTCATTTTCTTGCTAAGCTGA 58.926 39.130 0.00 0.00 0.00 4.26
5501 5926 4.703575 TGCTCATTTTCTTGCTAAGCTGAT 59.296 37.500 0.00 0.00 0.00 2.90
5502 5927 5.882000 TGCTCATTTTCTTGCTAAGCTGATA 59.118 36.000 0.00 0.00 0.00 2.15
5518 5943 4.827835 AGCTGATAAGCTGATTGCATGATT 59.172 37.500 2.86 0.00 44.44 2.57
5569 5997 5.512753 ACAGACTCACACTATGCTGATAG 57.487 43.478 0.00 0.00 38.06 2.08
5572 6000 6.603599 ACAGACTCACACTATGCTGATAGTTA 59.396 38.462 0.00 0.00 41.86 2.24
5587 6015 6.256757 GCTGATAGTTATTCTTCTTTGAGCGT 59.743 38.462 0.00 0.00 0.00 5.07
5588 6016 7.525688 TGATAGTTATTCTTCTTTGAGCGTG 57.474 36.000 0.00 0.00 0.00 5.34
5589 6017 7.097192 TGATAGTTATTCTTCTTTGAGCGTGT 58.903 34.615 0.00 0.00 0.00 4.49
5601 6038 1.775039 GAGCGTGTCAGTTGCTGCAA 61.775 55.000 11.69 11.69 39.49 4.08
5715 6152 7.958088 TGGTACATCATGATCTTATCGGTAAA 58.042 34.615 4.86 0.00 0.00 2.01
5716 6153 8.088365 TGGTACATCATGATCTTATCGGTAAAG 58.912 37.037 4.86 0.00 0.00 1.85
5764 6202 7.659390 ACAAGAGAGTGGAAGTTCAAGAATAAG 59.341 37.037 5.01 0.00 0.00 1.73
5768 6206 4.762251 AGTGGAAGTTCAAGAATAAGCACC 59.238 41.667 5.01 0.00 0.00 5.01
5769 6207 4.518970 GTGGAAGTTCAAGAATAAGCACCA 59.481 41.667 5.01 0.00 0.00 4.17
5770 6208 4.761739 TGGAAGTTCAAGAATAAGCACCAG 59.238 41.667 5.01 0.00 0.00 4.00
5771 6209 5.003804 GGAAGTTCAAGAATAAGCACCAGA 58.996 41.667 5.01 0.00 0.00 3.86
5772 6210 5.123027 GGAAGTTCAAGAATAAGCACCAGAG 59.877 44.000 5.01 0.00 0.00 3.35
5773 6211 5.489792 AGTTCAAGAATAAGCACCAGAGA 57.510 39.130 0.00 0.00 0.00 3.10
5774 6212 5.486526 AGTTCAAGAATAAGCACCAGAGAG 58.513 41.667 0.00 0.00 0.00 3.20
5775 6213 4.478206 TCAAGAATAAGCACCAGAGAGG 57.522 45.455 0.00 0.00 45.67 3.69
5776 6214 2.941720 CAAGAATAAGCACCAGAGAGGC 59.058 50.000 0.00 0.00 43.14 4.70
5777 6215 2.191400 AGAATAAGCACCAGAGAGGCA 58.809 47.619 0.00 0.00 43.14 4.75
5778 6216 2.170187 AGAATAAGCACCAGAGAGGCAG 59.830 50.000 0.00 0.00 43.14 4.85
5788 6229 4.036518 ACCAGAGAGGCAGAGATGTAATT 58.963 43.478 0.00 0.00 43.14 1.40
5793 6234 5.543405 AGAGAGGCAGAGATGTAATTGCTAT 59.457 40.000 0.00 0.00 36.79 2.97
5824 6265 1.951209 TGTAGGGCATTCAGGAGACA 58.049 50.000 0.00 0.00 0.00 3.41
6150 6599 2.137523 GCACCAGAAAACATTTGCCTG 58.862 47.619 0.00 0.00 0.00 4.85
6152 6601 3.740764 GCACCAGAAAACATTTGCCTGAA 60.741 43.478 7.98 0.00 0.00 3.02
6167 6616 5.637006 TGCCTGAACAAAACGCTTAATAT 57.363 34.783 0.00 0.00 0.00 1.28
6175 6624 7.753132 TGAACAAAACGCTTAATATTGTCATCC 59.247 33.333 0.00 0.00 33.39 3.51
6285 6736 2.044946 GCACTAACCCAGCCCCAG 60.045 66.667 0.00 0.00 0.00 4.45
6330 6785 4.379918 GCTGAACAAGATAGCTTTGAACCC 60.380 45.833 3.66 0.00 34.70 4.11
6332 6787 3.418684 ACAAGATAGCTTTGAACCCGT 57.581 42.857 3.66 0.00 30.14 5.28
6353 6808 1.943340 GAAGGAATCGGATGCAACTCC 59.057 52.381 0.00 0.00 0.00 3.85
6354 6809 0.911769 AGGAATCGGATGCAACTCCA 59.088 50.000 7.13 0.00 34.78 3.86
6358 6813 2.520465 ATCGGATGCAACTCCACGCA 62.520 55.000 7.13 0.00 43.45 5.24
6362 6817 3.557903 ATGCAACTCCACGCAGCCT 62.558 57.895 0.00 0.00 42.37 4.58
6579 10547 1.133915 GTTGAAGAACACTGACCCCCA 60.134 52.381 0.00 0.00 31.78 4.96
6640 10609 6.364165 CCTGTTGACAATGTTCATGTTTGATC 59.636 38.462 0.00 0.00 0.00 2.92
6679 10651 7.068103 TGTTCATGTATGGTGTTTTCTTGTCTT 59.932 33.333 0.00 0.00 0.00 3.01
6718 10690 0.094730 GCCTTTGTTCGGTTCGATCG 59.905 55.000 9.36 9.36 35.23 3.69
6720 10692 1.389106 CCTTTGTTCGGTTCGATCGAC 59.611 52.381 19.26 12.82 35.23 4.20
6732 10706 1.226603 GATCGACAAGGACGACCGG 60.227 63.158 0.00 0.00 42.37 5.28
6753 10727 2.611473 GCGGTCTGGATCTATCACCATG 60.611 54.545 7.78 0.00 35.54 3.66
6821 10796 3.131396 CTGTTATTATGGCCAGTCGACC 58.869 50.000 13.05 0.00 0.00 4.79
6829 10804 2.981302 CCAGTCGACCAGGATGCA 59.019 61.111 17.36 0.00 31.97 3.96
6835 10810 0.690192 TCGACCAGGATGCAAAGGAA 59.310 50.000 0.00 0.00 31.97 3.36
6848 10823 2.666317 CAAAGGAACCCCACTGTTTCT 58.334 47.619 0.00 0.00 35.53 2.52
6856 10831 2.158385 ACCCCACTGTTTCTATTGGCAA 60.158 45.455 0.68 0.68 0.00 4.52
6857 10832 2.896685 CCCCACTGTTTCTATTGGCAAA 59.103 45.455 3.01 0.00 0.00 3.68
6909 10884 4.844349 AACCTTACTACACAGGATGCAT 57.156 40.909 0.00 0.00 42.53 3.96
6995 10970 4.299796 GCAAAGCCCCAGACCCCA 62.300 66.667 0.00 0.00 0.00 4.96
7008 10983 2.436109 CCCCAGTGGTGTTGGAGG 59.564 66.667 8.74 0.00 37.96 4.30
7014 10989 2.776526 TGGTGTTGGAGGGGCTGT 60.777 61.111 0.00 0.00 0.00 4.40
7015 10990 2.391130 TGGTGTTGGAGGGGCTGTT 61.391 57.895 0.00 0.00 0.00 3.16
7029 11004 2.022129 CTGTTGCACGTCGGGAGTC 61.022 63.158 0.00 0.00 0.00 3.36
7030 11005 3.103911 GTTGCACGTCGGGAGTCG 61.104 66.667 0.00 0.00 46.46 4.18
7079 12807 3.398920 GGCGACGGTGATGTGATG 58.601 61.111 0.00 0.00 0.00 3.07
7080 12808 1.153647 GGCGACGGTGATGTGATGA 60.154 57.895 0.00 0.00 0.00 2.92
7081 12809 1.148157 GGCGACGGTGATGTGATGAG 61.148 60.000 0.00 0.00 0.00 2.90
7082 12810 0.458543 GCGACGGTGATGTGATGAGT 60.459 55.000 0.00 0.00 0.00 3.41
7083 12811 1.271876 CGACGGTGATGTGATGAGTG 58.728 55.000 0.00 0.00 0.00 3.51
7084 12812 1.135402 CGACGGTGATGTGATGAGTGA 60.135 52.381 0.00 0.00 0.00 3.41
7097 12825 0.605319 TGAGTGATCAAACGGTGGCC 60.605 55.000 0.00 0.00 0.00 5.36
7112 12840 1.226262 GGCCGGTGGGTCACATATT 59.774 57.895 1.90 0.00 38.05 1.28
7115 12843 1.953559 CCGGTGGGTCACATATTCAG 58.046 55.000 0.00 0.00 35.86 3.02
7118 12846 0.657840 GTGGGTCACATATTCAGCGC 59.342 55.000 0.00 0.00 34.08 5.92
7175 12903 0.605319 AGAAAAGGGCGTCGATGCAA 60.605 50.000 29.46 0.00 36.28 4.08
7182 12910 2.167861 GCGTCGATGCAAGGTCCTC 61.168 63.158 24.45 0.00 34.15 3.71
7185 12913 1.511305 TCGATGCAAGGTCCTCGAC 59.489 57.895 3.82 0.00 35.41 4.20
7200 12928 4.872485 GACGACGGCGAGCTCGAG 62.872 72.222 38.74 30.43 43.02 4.04
7203 12931 4.104417 GACGGCGAGCTCGAGTGT 62.104 66.667 38.74 29.68 43.02 3.55
7204 12932 3.612371 GACGGCGAGCTCGAGTGTT 62.612 63.158 38.74 17.22 43.02 3.32
7205 12933 2.430921 CGGCGAGCTCGAGTGTTT 60.431 61.111 38.74 0.00 43.02 2.83
7206 12934 2.022129 CGGCGAGCTCGAGTGTTTT 61.022 57.895 38.74 0.00 43.02 2.43
7256 13023 3.654273 TGTGTTTGGTTTGGGGGAATAA 58.346 40.909 0.00 0.00 0.00 1.40
7261 13028 6.205853 GTGTTTGGTTTGGGGGAATAATTTTC 59.794 38.462 0.00 0.00 0.00 2.29
7281 13048 3.939066 TCTTCTCGTTCTTTCCCCATTC 58.061 45.455 0.00 0.00 0.00 2.67
7302 13069 3.944650 TCCATTGGTGTGTTTATCATCGG 59.055 43.478 1.86 0.00 0.00 4.18
7303 13070 3.489059 CCATTGGTGTGTTTATCATCGGC 60.489 47.826 0.00 0.00 0.00 5.54
7308 13075 3.262420 GTGTGTTTATCATCGGCAGAGT 58.738 45.455 0.00 0.00 0.00 3.24
7311 13078 4.081917 TGTGTTTATCATCGGCAGAGTACA 60.082 41.667 0.00 0.00 0.00 2.90
7313 13080 5.049828 TGTTTATCATCGGCAGAGTACATG 58.950 41.667 0.00 0.00 0.00 3.21
7319 13086 2.379005 TCGGCAGAGTACATGATGAGT 58.621 47.619 0.00 0.00 0.00 3.41
7320 13087 2.760650 TCGGCAGAGTACATGATGAGTT 59.239 45.455 0.00 0.00 0.00 3.01
7328 13095 5.714333 AGAGTACATGATGAGTTGTGTCTCT 59.286 40.000 0.00 0.00 35.61 3.10
7331 13098 5.417754 ACATGATGAGTTGTGTCTCTGAT 57.582 39.130 0.00 0.00 35.68 2.90
7340 13107 1.902508 TGTGTCTCTGATGGGTCCTTC 59.097 52.381 0.00 0.00 0.00 3.46
7343 13110 0.687757 TCTCTGATGGGTCCTTCGGG 60.688 60.000 10.59 3.97 0.00 5.14
7344 13111 2.190578 CTGATGGGTCCTTCGGGC 59.809 66.667 4.35 0.00 34.44 6.13
7366 13133 4.223659 CCCGTTCGGTTTTATGTTTTCAG 58.776 43.478 10.36 0.00 0.00 3.02
7369 13136 4.673311 CGTTCGGTTTTATGTTTTCAGTGG 59.327 41.667 0.00 0.00 0.00 4.00
7374 13141 6.263392 TCGGTTTTATGTTTTCAGTGGATTCA 59.737 34.615 0.00 0.00 0.00 2.57
7378 13145 9.132521 GTTTTATGTTTTCAGTGGATTCATCTG 57.867 33.333 0.00 0.00 0.00 2.90
7380 13147 4.984295 TGTTTTCAGTGGATTCATCTGGA 58.016 39.130 4.41 0.00 0.00 3.86
7381 13148 5.573219 TGTTTTCAGTGGATTCATCTGGAT 58.427 37.500 4.41 0.00 0.00 3.41
7383 13150 6.151648 TGTTTTCAGTGGATTCATCTGGATTC 59.848 38.462 4.41 0.00 0.00 2.52
7384 13151 5.705397 TTCAGTGGATTCATCTGGATTCT 57.295 39.130 4.41 0.00 0.00 2.40
7385 13152 5.287674 TCAGTGGATTCATCTGGATTCTC 57.712 43.478 4.41 0.00 0.00 2.87
7386 13153 4.967442 TCAGTGGATTCATCTGGATTCTCT 59.033 41.667 4.41 0.00 0.00 3.10
7388 13155 5.527951 CAGTGGATTCATCTGGATTCTCTTG 59.472 44.000 0.00 0.00 0.00 3.02
7389 13156 4.275443 GTGGATTCATCTGGATTCTCTTGC 59.725 45.833 0.00 0.00 0.00 4.01
7393 13160 6.238703 GGATTCATCTGGATTCTCTTGCTTTC 60.239 42.308 0.00 0.00 0.00 2.62
7394 13161 4.521146 TCATCTGGATTCTCTTGCTTTCC 58.479 43.478 0.00 0.00 0.00 3.13
7396 13163 3.947868 TCTGGATTCTCTTGCTTTCCTG 58.052 45.455 0.00 0.00 0.00 3.86
7397 13164 3.015327 CTGGATTCTCTTGCTTTCCTGG 58.985 50.000 0.00 0.00 0.00 4.45
7398 13165 2.376518 TGGATTCTCTTGCTTTCCTGGT 59.623 45.455 0.00 0.00 0.00 4.00
7399 13166 3.013219 GGATTCTCTTGCTTTCCTGGTC 58.987 50.000 0.00 0.00 0.00 4.02
7401 13168 3.864789 TTCTCTTGCTTTCCTGGTCTT 57.135 42.857 0.00 0.00 0.00 3.01
7402 13169 3.409026 TCTCTTGCTTTCCTGGTCTTC 57.591 47.619 0.00 0.00 0.00 2.87
7403 13170 2.705658 TCTCTTGCTTTCCTGGTCTTCA 59.294 45.455 0.00 0.00 0.00 3.02
7415 13185 5.087323 TCCTGGTCTTCAGAGTTTCTACAT 58.913 41.667 0.00 0.00 46.18 2.29
7437 13207 3.456644 TGCCCCTTATTCCTTATCGTTGA 59.543 43.478 0.00 0.00 0.00 3.18
7441 13211 6.040504 GCCCCTTATTCCTTATCGTTGATTTT 59.959 38.462 0.00 0.00 0.00 1.82
7471 13245 3.244009 CCTTGGACAGTGATATGCGAGAT 60.244 47.826 0.00 0.00 0.00 2.75
7479 13253 0.038251 GATATGCGAGATCGTGGCCA 60.038 55.000 0.00 0.00 42.22 5.36
7483 13257 2.721859 CGAGATCGTGGCCATCGA 59.278 61.111 25.43 25.43 41.45 3.59
7485 13259 1.658717 GAGATCGTGGCCATCGACG 60.659 63.158 25.64 17.73 40.07 5.12
7486 13260 2.104331 GATCGTGGCCATCGACGT 59.896 61.111 25.64 15.16 40.07 4.34
7490 13264 2.357034 GTGGCCATCGACGTGTGT 60.357 61.111 9.72 0.00 0.00 3.72
7498 13272 1.983605 CATCGACGTGTGTTGGTCTAC 59.016 52.381 0.00 0.00 0.00 2.59
7501 13275 1.983605 CGACGTGTGTTGGTCTACATC 59.016 52.381 0.00 0.00 0.00 3.06
7504 13278 2.230508 ACGTGTGTTGGTCTACATCGAT 59.769 45.455 14.62 0.00 34.68 3.59
7513 13287 5.966636 TGGTCTACATCGATGATTTTTCG 57.033 39.130 31.33 5.33 37.94 3.46
7529 13303 0.109272 TTCGACCGCTGCTTCTACAG 60.109 55.000 0.00 0.00 40.80 2.74
7530 13304 1.517257 CGACCGCTGCTTCTACAGG 60.517 63.158 0.00 0.00 38.16 4.00
7533 13307 1.520342 CCGCTGCTTCTACAGGCTC 60.520 63.158 0.00 0.00 38.16 4.70
7534 13308 1.520342 CGCTGCTTCTACAGGCTCC 60.520 63.158 0.00 0.00 38.16 4.70
7570 13344 3.895232 TTGCTCTCATAAGGTGGAGAC 57.105 47.619 0.00 0.00 35.34 3.36
7584 13358 0.249657 GGAGACCCAGATGCGACATC 60.250 60.000 10.63 10.63 0.00 3.06
7592 13366 3.177487 CCAGATGCGACATCGAGATATG 58.823 50.000 5.26 3.78 43.02 1.78
7593 13367 3.119708 CCAGATGCGACATCGAGATATGA 60.120 47.826 5.26 0.00 43.02 2.15
7595 13369 4.734370 CAGATGCGACATCGAGATATGATC 59.266 45.833 5.26 0.00 43.02 2.92
7596 13370 4.397417 AGATGCGACATCGAGATATGATCA 59.603 41.667 5.26 0.00 43.02 2.92
7599 13373 3.420828 CGACATCGAGATATGATCACGG 58.579 50.000 0.00 0.00 42.38 4.94
7600 13374 3.175152 GACATCGAGATATGATCACGGC 58.825 50.000 0.00 0.00 42.38 5.68
7601 13375 2.180397 CATCGAGATATGATCACGGCG 58.820 52.381 4.80 4.80 42.38 6.46
7603 13377 0.387239 CGAGATATGATCACGGCGCA 60.387 55.000 10.83 0.00 39.24 6.09
7604 13378 1.063806 GAGATATGATCACGGCGCAC 58.936 55.000 10.83 0.00 0.00 5.34
7605 13379 0.676184 AGATATGATCACGGCGCACT 59.324 50.000 10.83 0.00 0.00 4.40
7609 13383 2.432456 GATCACGGCGCACTGTCA 60.432 61.111 10.83 0.00 31.05 3.58
7611 13385 4.961511 TCACGGCGCACTGTCACC 62.962 66.667 10.83 0.00 31.05 4.02
7617 13391 3.490759 CGCACTGTCACCGGATGC 61.491 66.667 9.46 6.97 0.00 3.91
7632 13406 2.795329 GGATGCAGGAGGAAAAAGACA 58.205 47.619 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 6.043012 CCAAAATCCTCTCCATCATCTAGAGT 59.957 42.308 0.00 0.00 35.93 3.24
167 168 3.967715 GACCGCCTGTCAAGTTCC 58.032 61.111 0.00 0.00 43.85 3.62
203 205 2.357517 CGAGACTTGCCAAGCGGT 60.358 61.111 3.88 0.00 33.28 5.68
244 246 2.702592 ACCTTTCTTTCGTGTGTGGA 57.297 45.000 0.00 0.00 0.00 4.02
293 295 1.002251 GTTGTCCGTTTTGCATTCCGA 60.002 47.619 0.00 0.00 0.00 4.55
508 511 4.767255 CACCTGCCGAGCTCCACC 62.767 72.222 8.47 0.00 0.00 4.61
537 540 5.106118 GGCTATGAAAAGACTGAAAGGGAAC 60.106 44.000 0.00 0.00 39.30 3.62
538 541 5.010282 GGCTATGAAAAGACTGAAAGGGAA 58.990 41.667 0.00 0.00 39.30 3.97
539 542 4.589908 GGCTATGAAAAGACTGAAAGGGA 58.410 43.478 0.00 0.00 39.30 4.20
540 543 3.375299 CGGCTATGAAAAGACTGAAAGGG 59.625 47.826 0.00 0.00 39.30 3.95
541 544 4.253685 TCGGCTATGAAAAGACTGAAAGG 58.746 43.478 0.00 0.00 39.30 3.11
542 545 5.862924 TTCGGCTATGAAAAGACTGAAAG 57.137 39.130 0.00 0.00 42.29 2.62
543 546 8.506168 AATATTCGGCTATGAAAAGACTGAAA 57.494 30.769 0.00 0.00 0.00 2.69
544 547 8.397906 CAAATATTCGGCTATGAAAAGACTGAA 58.602 33.333 0.00 0.00 0.00 3.02
545 548 7.552687 ACAAATATTCGGCTATGAAAAGACTGA 59.447 33.333 0.00 0.00 0.00 3.41
546 549 7.697691 ACAAATATTCGGCTATGAAAAGACTG 58.302 34.615 0.00 0.00 0.00 3.51
547 550 7.865706 ACAAATATTCGGCTATGAAAAGACT 57.134 32.000 0.00 0.00 0.00 3.24
550 553 8.905702 GCAATACAAATATTCGGCTATGAAAAG 58.094 33.333 0.00 0.00 0.00 2.27
565 568 6.202762 CAGATTAGGTGCGAGCAATACAAATA 59.797 38.462 0.00 0.00 0.00 1.40
569 572 3.457234 CAGATTAGGTGCGAGCAATACA 58.543 45.455 0.00 0.00 0.00 2.29
597 600 7.114095 GGGGGTAACTATGTGAATTGTAGAAA 58.886 38.462 0.00 0.00 0.00 2.52
598 601 6.655930 GGGGGTAACTATGTGAATTGTAGAA 58.344 40.000 0.00 0.00 0.00 2.10
619 625 9.503399 GTTATAGAAACAGATAAATACAGGGGG 57.497 37.037 0.00 0.00 0.00 5.40
633 641 7.672983 ATGTGAACTGTGGTTATAGAAACAG 57.327 36.000 0.00 0.00 44.46 3.16
683 691 4.202192 GGCCACACCCTATTGTACTACTAC 60.202 50.000 0.00 0.00 0.00 2.73
684 692 3.962718 GGCCACACCCTATTGTACTACTA 59.037 47.826 0.00 0.00 0.00 1.82
689 707 1.408266 CCTGGCCACACCCTATTGTAC 60.408 57.143 0.00 0.00 37.83 2.90
699 717 7.496263 TCTTTTTAAAATAAAACCTGGCCACAC 59.504 33.333 0.00 0.00 0.00 3.82
700 718 7.565680 TCTTTTTAAAATAAAACCTGGCCACA 58.434 30.769 0.00 0.00 0.00 4.17
710 728 9.893305 CGCCTCTCTCTTCTTTTTAAAATAAAA 57.107 29.630 0.55 0.00 0.00 1.52
718 756 5.393243 GCTACTCGCCTCTCTCTTCTTTTTA 60.393 44.000 0.00 0.00 0.00 1.52
778 816 0.597637 GGGACGACAGTGTGTGAGTG 60.598 60.000 0.00 0.00 0.00 3.51
779 817 1.740285 GGGACGACAGTGTGTGAGT 59.260 57.895 0.00 0.00 0.00 3.41
780 818 1.006102 GGGGACGACAGTGTGTGAG 60.006 63.158 0.00 0.00 0.00 3.51
781 819 3.134879 GGGGACGACAGTGTGTGA 58.865 61.111 0.00 0.00 0.00 3.58
891 929 2.202557 GGTGGCGGCGTTTATTGC 60.203 61.111 9.37 0.00 0.00 3.56
892 930 1.136565 CTGGTGGCGGCGTTTATTG 59.863 57.895 9.37 0.00 0.00 1.90
935 990 2.008329 GCGTACCGAAAGAGAGAGAGA 58.992 52.381 0.00 0.00 0.00 3.10
949 1017 2.185093 CCTACGGTTGGGCGTACC 59.815 66.667 0.26 0.00 40.81 3.34
1009 1078 4.214327 CGCCCGCTCTCCCTTCTC 62.214 72.222 0.00 0.00 0.00 2.87
1025 1094 1.961277 GAACTGTGGGCTGTGACCG 60.961 63.158 0.00 0.00 29.56 4.79
1028 1097 0.819259 GCAAGAACTGTGGGCTGTGA 60.819 55.000 0.00 0.00 0.00 3.58
1052 1121 3.787001 GAGGGAGGAACCGCTGGG 61.787 72.222 0.00 0.00 40.11 4.45
1054 1123 3.787001 GGGAGGGAGGAACCGCTG 61.787 72.222 0.00 0.00 40.11 5.18
1063 1132 2.525381 CAGATCCGGGGGAGGGAG 60.525 72.222 0.00 0.00 36.91 4.30
1200 1269 1.231751 ATGGTGGAGAGGGGAGGAGA 61.232 60.000 0.00 0.00 0.00 3.71
1201 1270 0.762461 GATGGTGGAGAGGGGAGGAG 60.762 65.000 0.00 0.00 0.00 3.69
1202 1271 1.231751 AGATGGTGGAGAGGGGAGGA 61.232 60.000 0.00 0.00 0.00 3.71
1203 1272 0.327000 AAGATGGTGGAGAGGGGAGG 60.327 60.000 0.00 0.00 0.00 4.30
1204 1273 0.835941 CAAGATGGTGGAGAGGGGAG 59.164 60.000 0.00 0.00 0.00 4.30
1207 1276 2.169352 CAGTACAAGATGGTGGAGAGGG 59.831 54.545 0.00 0.00 0.00 4.30
1222 1291 5.048224 CGAGAGGAAAGAAAGGTACAGTACA 60.048 44.000 12.89 0.00 0.00 2.90
1223 1292 5.400703 CGAGAGGAAAGAAAGGTACAGTAC 58.599 45.833 1.59 1.59 0.00 2.73
1224 1293 4.082354 GCGAGAGGAAAGAAAGGTACAGTA 60.082 45.833 0.00 0.00 0.00 2.74
1225 1294 3.306156 GCGAGAGGAAAGAAAGGTACAGT 60.306 47.826 0.00 0.00 0.00 3.55
1226 1295 3.254892 GCGAGAGGAAAGAAAGGTACAG 58.745 50.000 0.00 0.00 0.00 2.74
1227 1296 2.028385 GGCGAGAGGAAAGAAAGGTACA 60.028 50.000 0.00 0.00 0.00 2.90
1418 1499 2.892425 GACGCCCAAGATCGCTGG 60.892 66.667 9.34 9.34 0.00 4.85
1419 1500 3.257561 CGACGCCCAAGATCGCTG 61.258 66.667 0.00 0.00 0.00 5.18
1450 1531 1.349026 CACAGGAGGAGAAAAGGCTCA 59.651 52.381 0.00 0.00 36.62 4.26
1455 1536 5.010415 AGCAAAAATCACAGGAGGAGAAAAG 59.990 40.000 0.00 0.00 0.00 2.27
1472 1554 5.123027 CAGTTTGGGTTTAAGCAAGCAAAAA 59.877 36.000 0.00 0.00 37.50 1.94
1477 1559 3.726291 TCAGTTTGGGTTTAAGCAAGC 57.274 42.857 0.00 0.00 0.00 4.01
1504 1586 2.126110 GCACCCAAAATTCGCGGG 60.126 61.111 6.13 0.00 46.22 6.13
1620 1703 4.142381 GGTATGGACTTGCAGGAAAATCAC 60.142 45.833 1.40 0.00 0.00 3.06
1693 1784 2.544267 ACTCACGCTAAAACACTTCAGC 59.456 45.455 0.00 0.00 0.00 4.26
1706 1797 2.939022 GCGCAAAGAACTCACGCT 59.061 55.556 0.30 0.00 45.71 5.07
1733 1824 3.066900 AGAGGATACGAGTGACAATTCGG 59.933 47.826 13.28 0.00 39.65 4.30
1734 1825 4.294416 AGAGGATACGAGTGACAATTCG 57.706 45.455 8.58 8.58 46.39 3.34
1735 1826 6.380095 ACTAGAGGATACGAGTGACAATTC 57.620 41.667 0.00 0.00 46.39 2.17
1780 1880 9.972106 AAATGATTGCATTATTTTCCCCTAAAA 57.028 25.926 0.00 0.00 43.71 1.52
1781 1881 9.612066 GAAATGATTGCATTATTTTCCCCTAAA 57.388 29.630 0.00 0.00 43.71 1.85
1782 1882 8.210265 GGAAATGATTGCATTATTTTCCCCTAA 58.790 33.333 16.62 0.00 43.71 2.69
1788 1888 6.018832 CCACGGGAAATGATTGCATTATTTTC 60.019 38.462 0.00 0.00 43.71 2.29
1990 2092 1.760192 ATCATCCTGCTGAAAGTGGC 58.240 50.000 0.00 0.00 35.30 5.01
2111 2415 3.055094 GCTAGGTCCACTGGAAAATCTCA 60.055 47.826 0.00 0.00 31.38 3.27
2171 2475 2.641815 GGGACGGAGGGAGTACTATCTA 59.358 54.545 0.00 0.00 0.00 1.98
2179 2483 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
2182 2486 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2183 2487 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2184 2488 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2185 2489 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2186 2490 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2187 2491 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2235 2539 9.109393 ACGGATGTATCTAGTTACGTTTTAGTA 57.891 33.333 0.00 0.00 0.00 1.82
2236 2540 7.989826 ACGGATGTATCTAGTTACGTTTTAGT 58.010 34.615 0.00 3.78 0.00 2.24
2239 2543 9.807649 AAATACGGATGTATCTAGTTACGTTTT 57.192 29.630 0.00 2.11 40.42 2.43
2242 2546 9.494271 TCTAAATACGGATGTATCTAGTTACGT 57.506 33.333 5.54 5.54 40.42 3.57
2243 2547 9.752274 GTCTAAATACGGATGTATCTAGTTACG 57.248 37.037 6.50 0.00 40.42 3.18
2266 2570 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
2267 2571 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
2268 2572 9.325198 GTCCCAAAATTCTTGTCTTAAATTTGT 57.675 29.630 0.00 0.00 33.95 2.83
2269 2573 8.487176 CGTCCCAAAATTCTTGTCTTAAATTTG 58.513 33.333 0.00 0.00 33.95 2.32
2270 2574 7.655732 CCGTCCCAAAATTCTTGTCTTAAATTT 59.344 33.333 0.00 0.00 34.86 1.82
2271 2575 7.014808 TCCGTCCCAAAATTCTTGTCTTAAATT 59.985 33.333 0.00 0.00 0.00 1.82
2272 2576 6.492087 TCCGTCCCAAAATTCTTGTCTTAAAT 59.508 34.615 0.00 0.00 0.00 1.40
2273 2577 5.828859 TCCGTCCCAAAATTCTTGTCTTAAA 59.171 36.000 0.00 0.00 0.00 1.52
2274 2578 5.378332 TCCGTCCCAAAATTCTTGTCTTAA 58.622 37.500 0.00 0.00 0.00 1.85
2275 2579 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2276 2580 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2277 2581 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2278 2582 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2279 2583 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2280 2584 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2281 2585 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2282 2586 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2283 2587 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2284 2588 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2285 2589 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
2286 2590 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
2287 2591 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2288 2592 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
2289 2593 0.324091 GAACTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
2290 2594 0.033306 AGAACTACTCCCTCCGTCCC 60.033 60.000 0.00 0.00 0.00 4.46
2291 2595 2.725221 TAGAACTACTCCCTCCGTCC 57.275 55.000 0.00 0.00 0.00 4.79
2292 2596 5.397142 TTTTTAGAACTACTCCCTCCGTC 57.603 43.478 0.00 0.00 0.00 4.79
2311 2615 7.809665 ACGTAATACTAAAACGGATGCTTTTT 58.190 30.769 6.66 6.66 40.81 1.94
2312 2616 7.368480 ACGTAATACTAAAACGGATGCTTTT 57.632 32.000 0.00 1.48 40.81 2.27
2313 2617 6.973229 ACGTAATACTAAAACGGATGCTTT 57.027 33.333 0.00 0.00 40.81 3.51
2314 2618 6.973229 AACGTAATACTAAAACGGATGCTT 57.027 33.333 0.00 0.00 40.81 3.91
2315 2619 6.973229 AAACGTAATACTAAAACGGATGCT 57.027 33.333 0.00 0.00 40.81 3.79
2316 2620 8.382875 ACTAAAACGTAATACTAAAACGGATGC 58.617 33.333 0.00 0.00 40.81 3.91
2333 2637 9.455847 GAACGGATGTATCTAATACTAAAACGT 57.544 33.333 0.00 0.00 36.70 3.99
2334 2638 9.674824 AGAACGGATGTATCTAATACTAAAACG 57.325 33.333 0.00 0.00 36.70 3.60
2336 2640 9.976511 CCAGAACGGATGTATCTAATACTAAAA 57.023 33.333 0.00 0.00 36.56 1.52
2337 2641 9.358406 TCCAGAACGGATGTATCTAATACTAAA 57.642 33.333 0.00 0.00 39.64 1.85
2338 2642 8.929260 TCCAGAACGGATGTATCTAATACTAA 57.071 34.615 0.00 0.00 39.64 2.24
2354 2658 4.496010 CGTAACTAGAGTCATCCAGAACGG 60.496 50.000 0.00 0.00 0.00 4.44
2355 2659 4.094590 ACGTAACTAGAGTCATCCAGAACG 59.905 45.833 0.00 0.00 0.00 3.95
2356 2660 5.564048 ACGTAACTAGAGTCATCCAGAAC 57.436 43.478 0.00 0.00 0.00 3.01
2357 2661 6.585695 AAACGTAACTAGAGTCATCCAGAA 57.414 37.500 0.00 0.00 0.00 3.02
2358 2662 6.585695 AAAACGTAACTAGAGTCATCCAGA 57.414 37.500 0.00 0.00 0.00 3.86
2359 2663 7.536855 ACTAAAACGTAACTAGAGTCATCCAG 58.463 38.462 0.00 0.00 0.00 3.86
2360 2664 7.458409 ACTAAAACGTAACTAGAGTCATCCA 57.542 36.000 0.00 0.00 0.00 3.41
2407 2711 8.726988 CGTCCCAAAATTCTTGTCTTAGATTTA 58.273 33.333 0.00 0.00 0.00 1.40
2408 2712 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2409 2713 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2410 2714 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2411 2715 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2412 2716 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2413 2717 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2414 2718 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2415 2719 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2416 2720 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2417 2721 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2418 2722 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2419 2723 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2420 2724 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2421 2725 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2422 2726 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2423 2727 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
2424 2728 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
2425 2729 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
2426 2730 0.115745 AACTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
2427 2731 0.324091 GAACTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
2428 2732 0.033306 AGAACTACTCCCTCCGTCCC 60.033 60.000 0.00 0.00 0.00 4.46
2429 2733 2.725221 TAGAACTACTCCCTCCGTCC 57.275 55.000 0.00 0.00 0.00 4.79
2430 2734 5.397142 TTTTTAGAACTACTCCCTCCGTC 57.603 43.478 0.00 0.00 0.00 4.79
2503 2881 4.701956 AACTACAATCCCTGCAAAATCG 57.298 40.909 0.00 0.00 0.00 3.34
2545 2926 2.022195 TGACCTCTGTCGCCATAGTAC 58.978 52.381 0.00 0.00 44.86 2.73
2582 2963 0.820891 ATGATTCCTCATGCGGCCAC 60.821 55.000 2.24 0.00 40.66 5.01
2614 2995 5.677319 TGGAAGTGTAATTACCTGAGAGG 57.323 43.478 13.01 0.00 42.49 3.69
2615 2996 8.012957 ACTATGGAAGTGTAATTACCTGAGAG 57.987 38.462 13.01 6.98 36.93 3.20
2628 3009 7.676043 AGCCATACTATGATACTATGGAAGTGT 59.324 37.037 17.21 0.00 39.52 3.55
2646 3027 8.814038 ATTCTTTGTCTGAAATTAGCCATACT 57.186 30.769 0.00 0.00 0.00 2.12
2993 3377 7.227156 CCTAAGGGCAGAAATAACACAGATAT 58.773 38.462 0.00 0.00 0.00 1.63
3438 3822 4.058124 CCAACTGATGAAGAACGAGTCAA 58.942 43.478 0.00 0.00 0.00 3.18
3489 3873 6.016024 TGTTTATCACTGCTTGCATTTTCTCT 60.016 34.615 0.00 0.00 0.00 3.10
3512 3896 6.403866 TCTTGACCACATTTAGCATTTTGT 57.596 33.333 0.00 0.00 0.00 2.83
3543 3927 1.600957 CGTAGCTTCATTGGGCATCAG 59.399 52.381 0.00 0.00 0.00 2.90
3669 4053 9.447040 GATGAAAAAGTTTACCTTACTGACAAC 57.553 33.333 0.00 0.00 31.48 3.32
3725 4109 9.110617 CAAATGTAGATAGCAGCAAATAATTCG 57.889 33.333 0.00 0.00 0.00 3.34
3732 4116 4.272489 AGGCAAATGTAGATAGCAGCAAA 58.728 39.130 0.00 0.00 0.00 3.68
3871 4256 8.746052 TGAACACCATATTATTAGTTTCAGGG 57.254 34.615 0.00 0.00 0.00 4.45
3892 4277 5.011023 AGGACCCTGAAAATTGTTCATGAAC 59.989 40.000 28.10 28.10 41.50 3.18
4156 4541 1.220749 GGGGCGACATGAGTTAGCA 59.779 57.895 0.00 0.00 34.66 3.49
4161 4546 0.033011 AGTAGAGGGGCGACATGAGT 60.033 55.000 0.00 0.00 0.00 3.41
4215 4600 5.469760 GGGCTAGCAATGTTTGTTTGATTTT 59.530 36.000 18.24 0.00 0.00 1.82
4318 4703 0.969149 TATCAGCTGTAGATGGCCGG 59.031 55.000 14.67 0.00 31.33 6.13
4438 4823 1.930567 CAATGTTGGCATGCTTAGGC 58.069 50.000 18.92 0.10 35.15 3.93
4566 4954 1.557269 AATCCCTCTTGCGACAGGCT 61.557 55.000 0.00 0.00 44.05 4.58
4618 5006 3.030291 CCTCTCAGCAGTAGATGGTCTT 58.970 50.000 0.00 0.00 37.60 3.01
4619 5007 2.665165 CCTCTCAGCAGTAGATGGTCT 58.335 52.381 0.00 0.00 37.60 3.85
4734 5122 3.569491 ACATTAGCATGCTTAAGCCCAT 58.431 40.909 28.02 9.66 41.18 4.00
4830 5218 3.499737 GGCGACAAGGCGTGATGG 61.500 66.667 7.60 0.00 35.04 3.51
4837 5225 2.954611 GTTGAAGGGCGACAAGGC 59.045 61.111 0.00 0.00 45.91 4.35
4891 5279 8.614469 TTATTGGTGTTTTTGGATCCAATTTC 57.386 30.769 27.53 18.94 43.52 2.17
5010 5435 5.303971 ACAGAGAGGAAACAGTCAGAAATG 58.696 41.667 0.00 0.00 0.00 2.32
5118 5543 8.883731 ACAATTAAGCATACATGTCTGTAAGTC 58.116 33.333 0.00 0.00 41.09 3.01
5212 5637 1.611519 TTAGTTTCCCGCCAACTTGG 58.388 50.000 3.10 3.10 41.55 3.61
5497 5922 6.504398 ACAAATCATGCAATCAGCTTATCAG 58.496 36.000 0.00 0.00 45.94 2.90
5498 5923 6.459670 ACAAATCATGCAATCAGCTTATCA 57.540 33.333 0.00 0.00 45.94 2.15
5499 5924 7.766219 AAACAAATCATGCAATCAGCTTATC 57.234 32.000 0.00 0.00 45.94 1.75
5500 5925 7.604927 ACAAAACAAATCATGCAATCAGCTTAT 59.395 29.630 0.00 0.00 45.94 1.73
5501 5926 6.930164 ACAAAACAAATCATGCAATCAGCTTA 59.070 30.769 0.00 0.00 45.94 3.09
5502 5927 5.761234 ACAAAACAAATCATGCAATCAGCTT 59.239 32.000 0.00 0.00 45.94 3.74
5545 5973 4.972514 TCAGCATAGTGTGAGTCTGTAG 57.027 45.455 0.00 0.00 0.00 2.74
5549 5977 7.831691 ATAACTATCAGCATAGTGTGAGTCT 57.168 36.000 0.00 0.00 43.94 3.24
5569 5997 5.177696 ACTGACACGCTCAAAGAAGAATAAC 59.822 40.000 0.00 0.00 0.00 1.89
5572 6000 3.733337 ACTGACACGCTCAAAGAAGAAT 58.267 40.909 0.00 0.00 0.00 2.40
5587 6015 1.311859 CTTCCTTGCAGCAACTGACA 58.688 50.000 2.83 0.00 32.44 3.58
5588 6016 0.039708 GCTTCCTTGCAGCAACTGAC 60.040 55.000 2.83 0.00 37.22 3.51
5589 6017 0.466007 TGCTTCCTTGCAGCAACTGA 60.466 50.000 2.83 0.80 44.42 3.41
5633 6070 9.271828 CATAATGAGGTGTAAACTGTATGCATA 57.728 33.333 1.16 1.16 0.00 3.14
5732 6170 9.442047 CTTGAACTTCCACTCTCTTGTTATATT 57.558 33.333 0.00 0.00 0.00 1.28
5764 6202 0.179078 CATCTCTGCCTCTCTGGTGC 60.179 60.000 0.00 0.00 38.35 5.01
5768 6206 3.808726 GCAATTACATCTCTGCCTCTCTG 59.191 47.826 0.00 0.00 0.00 3.35
5769 6207 3.710677 AGCAATTACATCTCTGCCTCTCT 59.289 43.478 0.00 0.00 35.33 3.10
5770 6208 4.070630 AGCAATTACATCTCTGCCTCTC 57.929 45.455 0.00 0.00 35.33 3.20
5771 6209 5.822132 ATAGCAATTACATCTCTGCCTCT 57.178 39.130 0.00 0.00 35.33 3.69
5772 6210 5.762218 ACAATAGCAATTACATCTCTGCCTC 59.238 40.000 0.00 0.00 35.33 4.70
5773 6211 5.530171 CACAATAGCAATTACATCTCTGCCT 59.470 40.000 0.00 0.00 35.33 4.75
5774 6212 5.528690 TCACAATAGCAATTACATCTCTGCC 59.471 40.000 0.00 0.00 35.33 4.85
5775 6213 6.609237 TCACAATAGCAATTACATCTCTGC 57.391 37.500 0.00 0.00 34.96 4.26
5776 6214 9.053840 AGAATCACAATAGCAATTACATCTCTG 57.946 33.333 0.00 0.00 0.00 3.35
5777 6215 9.624373 AAGAATCACAATAGCAATTACATCTCT 57.376 29.630 0.00 0.00 0.00 3.10
5788 6229 5.125417 GCCCTACAAAAGAATCACAATAGCA 59.875 40.000 0.00 0.00 0.00 3.49
5793 6234 5.538053 TGAATGCCCTACAAAAGAATCACAA 59.462 36.000 0.00 0.00 0.00 3.33
5824 6265 4.471904 TGCAAATACTCGAGATCCAACT 57.528 40.909 21.68 0.00 0.00 3.16
5899 6340 8.105097 TCTGTAGCAAAATAAAAGCACATACA 57.895 30.769 0.00 0.00 0.00 2.29
5974 6415 9.614792 AGGTCAAATCTAATGTAAAGATACACC 57.385 33.333 0.00 0.00 44.47 4.16
6150 6599 7.220108 GGGATGACAATATTAAGCGTTTTGTTC 59.780 37.037 0.00 0.00 31.09 3.18
6152 6601 6.377146 AGGGATGACAATATTAAGCGTTTTGT 59.623 34.615 0.00 0.00 33.47 2.83
6167 6616 6.543465 CAGCAAGTTATAATGAGGGATGACAA 59.457 38.462 0.00 0.00 0.00 3.18
6175 6624 5.185454 TGGACACAGCAAGTTATAATGAGG 58.815 41.667 0.00 0.00 0.00 3.86
6220 6669 9.726232 CATGGACAAAGATTCATGTATGTTAAG 57.274 33.333 0.00 0.00 34.12 1.85
6309 6764 3.751175 CGGGTTCAAAGCTATCTTGTTCA 59.249 43.478 0.00 0.00 31.78 3.18
6330 6785 1.062587 GTTGCATCCGATTCCTTCACG 59.937 52.381 0.00 0.00 0.00 4.35
6332 6787 2.632377 GAGTTGCATCCGATTCCTTCA 58.368 47.619 0.00 0.00 0.00 3.02
6353 6808 0.585357 GATGATGCTTAGGCTGCGTG 59.415 55.000 4.91 0.00 39.59 5.34
6354 6809 0.533755 GGATGATGCTTAGGCTGCGT 60.534 55.000 0.00 0.00 39.59 5.24
6358 6813 0.533755 GCACGGATGATGCTTAGGCT 60.534 55.000 0.00 0.00 40.08 4.58
6414 6869 2.240160 TGACAAAAGTGGTGGTGGTAGT 59.760 45.455 0.00 0.00 0.00 2.73
6560 7023 1.142870 CTGGGGGTCAGTGTTCTTCAA 59.857 52.381 0.00 0.00 38.64 2.69
6579 10547 1.002544 CTGAACTTCCCGAGCTTTCCT 59.997 52.381 0.00 0.00 0.00 3.36
6640 10609 4.621068 ACATGAACAATTGCATCTACGG 57.379 40.909 5.05 0.00 0.00 4.02
6679 10651 2.029649 GCTTGCAATCAGCTCCAAAGAA 60.030 45.455 0.00 0.00 45.94 2.52
6732 10706 1.040646 TGGTGATAGATCCAGACCGC 58.959 55.000 0.00 0.00 0.00 5.68
6768 10742 3.733337 AGATCGGGTACATCATTTCTGC 58.267 45.455 0.00 0.00 0.00 4.26
6821 10796 0.251742 TGGGGTTCCTTTGCATCCTG 60.252 55.000 0.00 0.00 0.00 3.86
6829 10804 4.741928 ATAGAAACAGTGGGGTTCCTTT 57.258 40.909 0.00 0.00 0.00 3.11
6835 10810 1.427368 TGCCAATAGAAACAGTGGGGT 59.573 47.619 0.00 0.00 0.00 4.95
6856 10831 5.778862 AGTACGGCTAAAATGTGCAAAATT 58.221 33.333 0.00 0.00 0.00 1.82
6857 10832 5.385509 AGTACGGCTAAAATGTGCAAAAT 57.614 34.783 0.00 0.00 0.00 1.82
6870 10845 8.096414 AGTAAGGTTTTCAATTTAGTACGGCTA 58.904 33.333 0.00 0.00 0.00 3.93
6889 10864 3.118261 CCATGCATCCTGTGTAGTAAGGT 60.118 47.826 0.00 0.00 34.94 3.50
6891 10866 3.118261 ACCCATGCATCCTGTGTAGTAAG 60.118 47.826 0.00 0.00 0.00 2.34
6909 10884 4.851843 TCACGAGATTAGTCTAGAACCCA 58.148 43.478 2.39 0.00 33.97 4.51
6991 10966 2.436109 CCTCCAACACCACTGGGG 59.564 66.667 0.00 0.00 44.81 4.96
6992 10967 2.436109 CCCTCCAACACCACTGGG 59.564 66.667 0.00 0.00 41.29 4.45
6993 10968 2.436109 CCCCTCCAACACCACTGG 59.564 66.667 0.00 0.00 35.05 4.00
6994 10969 2.282462 GCCCCTCCAACACCACTG 60.282 66.667 0.00 0.00 0.00 3.66
6995 10970 2.450502 AGCCCCTCCAACACCACT 60.451 61.111 0.00 0.00 0.00 4.00
7002 10977 2.203480 GTGCAACAGCCCCTCCAA 60.203 61.111 0.00 0.00 36.32 3.53
7003 10978 4.641645 CGTGCAACAGCCCCTCCA 62.642 66.667 0.00 0.00 35.74 3.86
7014 10989 4.351938 CCGACTCCCGACGTGCAA 62.352 66.667 0.00 0.00 41.76 4.08
7029 11004 1.443407 CACCAGCTCCTCCATACCG 59.557 63.158 0.00 0.00 0.00 4.02
7030 11005 0.691078 TCCACCAGCTCCTCCATACC 60.691 60.000 0.00 0.00 0.00 2.73
7055 12783 2.768492 ATCACCGTCGCCGTCCTAC 61.768 63.158 0.00 0.00 0.00 3.18
7056 12784 2.438975 ATCACCGTCGCCGTCCTA 60.439 61.111 0.00 0.00 0.00 2.94
7057 12785 4.129737 CATCACCGTCGCCGTCCT 62.130 66.667 0.00 0.00 0.00 3.85
7058 12786 4.430765 ACATCACCGTCGCCGTCC 62.431 66.667 0.00 0.00 0.00 4.79
7059 12787 2.884087 ATCACATCACCGTCGCCGTC 62.884 60.000 0.00 0.00 0.00 4.79
7060 12788 3.001902 ATCACATCACCGTCGCCGT 62.002 57.895 0.00 0.00 0.00 5.68
7061 12789 2.202743 ATCACATCACCGTCGCCG 60.203 61.111 0.00 0.00 0.00 6.46
7062 12790 1.148157 CTCATCACATCACCGTCGCC 61.148 60.000 0.00 0.00 0.00 5.54
7063 12791 0.458543 ACTCATCACATCACCGTCGC 60.459 55.000 0.00 0.00 0.00 5.19
7064 12792 1.135402 TCACTCATCACATCACCGTCG 60.135 52.381 0.00 0.00 0.00 5.12
7065 12793 2.654749 TCACTCATCACATCACCGTC 57.345 50.000 0.00 0.00 0.00 4.79
7066 12794 2.497273 TGATCACTCATCACATCACCGT 59.503 45.455 0.00 0.00 36.51 4.83
7067 12795 3.169355 TGATCACTCATCACATCACCG 57.831 47.619 0.00 0.00 36.51 4.94
7068 12796 4.201753 CGTTTGATCACTCATCACATCACC 60.202 45.833 0.00 0.00 41.56 4.02
7069 12797 4.201753 CCGTTTGATCACTCATCACATCAC 60.202 45.833 0.00 0.00 41.56 3.06
7070 12798 3.934579 CCGTTTGATCACTCATCACATCA 59.065 43.478 0.00 0.00 41.56 3.07
7071 12799 3.935203 ACCGTTTGATCACTCATCACATC 59.065 43.478 0.00 0.00 41.56 3.06
7072 12800 3.686241 CACCGTTTGATCACTCATCACAT 59.314 43.478 0.00 0.00 41.56 3.21
7073 12801 3.066380 CACCGTTTGATCACTCATCACA 58.934 45.455 0.00 0.00 41.56 3.58
7074 12802 2.416547 CCACCGTTTGATCACTCATCAC 59.583 50.000 0.00 0.00 41.56 3.06
7075 12803 2.698803 CCACCGTTTGATCACTCATCA 58.301 47.619 0.00 0.00 39.99 3.07
7076 12804 1.398390 GCCACCGTTTGATCACTCATC 59.602 52.381 0.00 0.00 0.00 2.92
7077 12805 1.453155 GCCACCGTTTGATCACTCAT 58.547 50.000 0.00 0.00 0.00 2.90
7078 12806 0.605319 GGCCACCGTTTGATCACTCA 60.605 55.000 0.00 0.00 0.00 3.41
7079 12807 1.635663 CGGCCACCGTTTGATCACTC 61.636 60.000 2.24 0.00 42.73 3.51
7080 12808 1.671054 CGGCCACCGTTTGATCACT 60.671 57.895 2.24 0.00 42.73 3.41
7081 12809 2.686816 CCGGCCACCGTTTGATCAC 61.687 63.158 2.24 0.00 46.80 3.06
7082 12810 2.359354 CCGGCCACCGTTTGATCA 60.359 61.111 2.24 0.00 46.80 2.92
7083 12811 2.359478 ACCGGCCACCGTTTGATC 60.359 61.111 0.00 0.00 46.80 2.92
7084 12812 2.671619 CACCGGCCACCGTTTGAT 60.672 61.111 0.00 0.00 46.80 2.57
7097 12825 1.299541 GCTGAATATGTGACCCACCG 58.700 55.000 0.00 0.00 32.73 4.94
7112 12840 2.004808 ATTGAGGATCGTCGCGCTGA 62.005 55.000 5.56 0.90 38.61 4.26
7115 12843 2.589492 CCATTGAGGATCGTCGCGC 61.589 63.158 0.00 0.00 41.22 6.86
7118 12846 1.951130 CCGCCATTGAGGATCGTCG 60.951 63.158 10.63 0.00 41.22 5.12
7155 12883 1.019278 TGCATCGACGCCCTTTTCTC 61.019 55.000 0.00 0.00 0.00 2.87
7165 12893 1.874019 CGAGGACCTTGCATCGACG 60.874 63.158 0.00 0.00 43.94 5.12
7256 13023 4.725490 TGGGGAAAGAACGAGAAGAAAAT 58.275 39.130 0.00 0.00 0.00 1.82
7261 13028 3.010420 GGAATGGGGAAAGAACGAGAAG 58.990 50.000 0.00 0.00 0.00 2.85
7281 13048 3.489059 GCCGATGATAAACACACCAATGG 60.489 47.826 0.00 0.00 0.00 3.16
7302 13069 4.248859 ACACAACTCATCATGTACTCTGC 58.751 43.478 0.00 0.00 0.00 4.26
7303 13070 5.718146 AGACACAACTCATCATGTACTCTG 58.282 41.667 0.00 0.00 0.00 3.35
7308 13075 5.982890 TCAGAGACACAACTCATCATGTA 57.017 39.130 0.00 0.00 39.14 2.29
7311 13078 4.383880 CCCATCAGAGACACAACTCATCAT 60.384 45.833 0.00 0.00 39.14 2.45
7313 13080 3.055530 ACCCATCAGAGACACAACTCATC 60.056 47.826 0.00 0.00 39.14 2.92
7319 13086 2.030027 AGGACCCATCAGAGACACAA 57.970 50.000 0.00 0.00 0.00 3.33
7320 13087 1.902508 GAAGGACCCATCAGAGACACA 59.097 52.381 0.00 0.00 0.00 3.72
7340 13107 1.746239 ATAAAACCGAACGGGCCCG 60.746 57.895 42.17 42.17 46.03 6.13
7343 13110 2.710220 AAACATAAAACCGAACGGGC 57.290 45.000 17.44 0.00 40.62 6.13
7344 13111 4.223659 CTGAAAACATAAAACCGAACGGG 58.776 43.478 17.44 1.19 43.62 5.28
7366 13133 4.275443 GCAAGAGAATCCAGATGAATCCAC 59.725 45.833 0.00 0.00 33.66 4.02
7369 13136 6.238703 GGAAAGCAAGAGAATCCAGATGAATC 60.239 42.308 0.00 0.00 33.66 2.52
7374 13141 4.525024 CAGGAAAGCAAGAGAATCCAGAT 58.475 43.478 0.00 0.00 33.66 2.90
7378 13145 3.013219 GACCAGGAAAGCAAGAGAATCC 58.987 50.000 0.00 0.00 33.66 3.01
7380 13147 4.202503 TGAAGACCAGGAAAGCAAGAGAAT 60.203 41.667 0.00 0.00 0.00 2.40
7381 13148 3.136443 TGAAGACCAGGAAAGCAAGAGAA 59.864 43.478 0.00 0.00 0.00 2.87
7383 13150 3.072944 CTGAAGACCAGGAAAGCAAGAG 58.927 50.000 0.00 0.00 39.23 2.85
7384 13151 2.705658 TCTGAAGACCAGGAAAGCAAGA 59.294 45.455 0.00 0.00 43.12 3.02
7385 13152 3.072944 CTCTGAAGACCAGGAAAGCAAG 58.927 50.000 0.00 0.00 43.12 4.01
7386 13153 2.439507 ACTCTGAAGACCAGGAAAGCAA 59.560 45.455 0.00 0.00 43.12 3.91
7388 13155 2.849294 ACTCTGAAGACCAGGAAAGC 57.151 50.000 0.00 0.00 43.12 3.51
7389 13156 4.967036 AGAAACTCTGAAGACCAGGAAAG 58.033 43.478 0.00 0.00 43.12 2.62
7393 13160 4.873746 TGTAGAAACTCTGAAGACCAGG 57.126 45.455 0.00 0.00 43.12 4.45
7394 13161 4.629200 GCATGTAGAAACTCTGAAGACCAG 59.371 45.833 0.00 0.00 44.27 4.00
7396 13163 3.935828 GGCATGTAGAAACTCTGAAGACC 59.064 47.826 0.00 0.00 0.00 3.85
7397 13164 3.935828 GGGCATGTAGAAACTCTGAAGAC 59.064 47.826 0.00 0.00 0.00 3.01
7398 13165 3.055094 GGGGCATGTAGAAACTCTGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
7399 13166 3.054802 AGGGGCATGTAGAAACTCTGAAG 60.055 47.826 0.00 0.00 0.00 3.02
7401 13168 2.551270 AGGGGCATGTAGAAACTCTGA 58.449 47.619 0.00 0.00 0.00 3.27
7402 13169 3.356529 AAGGGGCATGTAGAAACTCTG 57.643 47.619 0.00 0.00 0.00 3.35
7403 13170 5.398012 GGAATAAGGGGCATGTAGAAACTCT 60.398 44.000 0.00 0.00 0.00 3.24
7415 13185 3.456644 TCAACGATAAGGAATAAGGGGCA 59.543 43.478 0.00 0.00 0.00 5.36
7441 13211 3.943671 TCACTGTCCAAGGGAAGAAAA 57.056 42.857 0.00 0.00 34.48 2.29
7451 13221 3.550842 CGATCTCGCATATCACTGTCCAA 60.551 47.826 0.00 0.00 0.00 3.53
7457 13231 1.336332 GCCACGATCTCGCATATCACT 60.336 52.381 0.00 0.00 44.43 3.41
7471 13245 3.676605 ACACGTCGATGGCCACGA 61.677 61.111 21.41 21.41 39.38 4.35
7479 13253 1.610038 TGTAGACCAACACACGTCGAT 59.390 47.619 0.00 0.00 34.10 3.59
7483 13257 1.610038 TCGATGTAGACCAACACACGT 59.390 47.619 0.00 0.00 35.49 4.49
7485 13259 3.845178 TCATCGATGTAGACCAACACAC 58.155 45.455 24.09 0.00 30.75 3.82
7486 13260 4.736126 ATCATCGATGTAGACCAACACA 57.264 40.909 24.09 1.41 30.75 3.72
7490 13264 6.103330 TCGAAAAATCATCGATGTAGACCAA 58.897 36.000 24.09 4.22 43.76 3.67
7501 13275 1.852077 GCAGCGGTCGAAAAATCATCG 60.852 52.381 0.00 0.00 41.53 3.84
7504 13278 1.196808 GAAGCAGCGGTCGAAAAATCA 59.803 47.619 0.00 0.00 0.00 2.57
7513 13287 1.811679 GCCTGTAGAAGCAGCGGTC 60.812 63.158 0.00 0.00 35.28 4.79
7514 13288 2.232298 GAGCCTGTAGAAGCAGCGGT 62.232 60.000 0.00 0.00 35.28 5.68
7547 13321 3.840666 TCTCCACCTTATGAGAGCAAACT 59.159 43.478 0.00 0.00 32.84 2.66
7557 13331 2.486191 GCATCTGGGTCTCCACCTTATG 60.486 54.545 0.00 0.00 43.22 1.90
7559 13333 1.204146 GCATCTGGGTCTCCACCTTA 58.796 55.000 0.00 0.00 43.22 2.69
7560 13334 1.903877 CGCATCTGGGTCTCCACCTT 61.904 60.000 0.00 0.00 43.22 3.50
7562 13336 2.187946 CGCATCTGGGTCTCCACC 59.812 66.667 0.00 0.00 42.90 4.61
7570 13344 0.316522 ATCTCGATGTCGCATCTGGG 59.683 55.000 14.85 10.00 39.60 4.45
7584 13358 0.387239 TGCGCCGTGATCATATCTCG 60.387 55.000 4.18 0.00 43.57 4.04
7592 13366 2.432456 TGACAGTGCGCCGTGATC 60.432 61.111 4.18 3.63 0.00 2.92
7593 13367 2.738521 GTGACAGTGCGCCGTGAT 60.739 61.111 4.18 0.00 0.00 3.06
7599 13373 3.490759 CATCCGGTGACAGTGCGC 61.491 66.667 0.00 0.00 0.00 6.09
7600 13374 3.490759 GCATCCGGTGACAGTGCG 61.491 66.667 0.00 0.00 0.00 5.34
7601 13375 2.358615 TGCATCCGGTGACAGTGC 60.359 61.111 0.00 4.65 36.39 4.40
7603 13377 1.892819 CTCCTGCATCCGGTGACAGT 61.893 60.000 15.68 0.00 33.13 3.55
7604 13378 1.153489 CTCCTGCATCCGGTGACAG 60.153 63.158 0.00 7.37 34.09 3.51
7605 13379 2.659063 CCTCCTGCATCCGGTGACA 61.659 63.158 0.00 0.00 0.00 3.58
7609 13383 0.404040 TTTTTCCTCCTGCATCCGGT 59.596 50.000 0.00 0.00 0.00 5.28
7611 13385 1.740025 GTCTTTTTCCTCCTGCATCCG 59.260 52.381 0.00 0.00 0.00 4.18
7617 13391 4.580167 TGTGTTGATGTCTTTTTCCTCCTG 59.420 41.667 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.