Multiple sequence alignment - TraesCS1A01G260000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G260000 chr1A 100.000 2898 0 0 1 2898 453524614 453521717 0.000000e+00 5352.0
1 TraesCS1A01G260000 chr1D 91.470 2122 87 47 12 2078 353558803 353556721 0.000000e+00 2830.0
2 TraesCS1A01G260000 chr1D 93.194 382 19 2 2463 2838 353556579 353556199 3.260000e-154 555.0
3 TraesCS1A01G260000 chr1D 90.833 120 7 3 2350 2466 353556728 353556610 1.080000e-34 158.0
4 TraesCS1A01G260000 chr1D 90.323 62 2 1 2837 2898 353556154 353556097 8.610000e-11 78.7
5 TraesCS1A01G260000 chr1B 91.244 2090 91 33 39 2077 475471177 475469129 0.000000e+00 2761.0
6 TraesCS1A01G260000 chr1B 91.537 449 20 5 2463 2898 475468988 475468545 1.150000e-168 603.0
7 TraesCS1A01G260000 chr1B 89.167 120 9 3 2350 2466 475469135 475469017 2.330000e-31 147.0
8 TraesCS1A01G260000 chr3A 88.889 396 35 7 1030 1422 647755573 647755184 2.020000e-131 479.0
9 TraesCS1A01G260000 chr3A 83.224 304 47 4 1094 1395 59532234 59532535 2.840000e-70 276.0
10 TraesCS1A01G260000 chr3D 88.295 393 43 2 1030 1422 511726757 511726368 4.370000e-128 468.0
11 TraesCS1A01G260000 chr3D 83.882 304 45 4 1094 1395 47493584 47493885 1.310000e-73 287.0
12 TraesCS1A01G260000 chr3B 87.310 394 45 4 1030 1422 674063444 674063055 2.050000e-121 446.0
13 TraesCS1A01G260000 chr3B 82.895 304 48 4 1094 1395 74294229 74294530 1.320000e-68 270.0
14 TraesCS1A01G260000 chr2A 97.976 247 5 0 2079 2325 771187739 771187985 2.060000e-116 429.0
15 TraesCS1A01G260000 chr6D 96.400 250 9 0 2079 2328 36066994 36066745 2.080000e-111 412.0
16 TraesCS1A01G260000 chr7A 93.525 278 11 4 2079 2349 675076606 675076329 9.670000e-110 407.0
17 TraesCS1A01G260000 chr7A 95.968 248 10 0 2078 2325 50022210 50021963 1.250000e-108 403.0
18 TraesCS1A01G260000 chr6A 96.371 248 7 2 2079 2325 575465725 575465971 9.670000e-110 407.0
19 TraesCS1A01G260000 chr4A 96.356 247 9 0 2079 2325 742276500 742276746 9.670000e-110 407.0
20 TraesCS1A01G260000 chr2D 96.356 247 8 1 2079 2325 645314857 645315102 3.480000e-109 405.0
21 TraesCS1A01G260000 chr5B 95.968 248 8 2 2079 2325 475592390 475592144 4.500000e-108 401.0
22 TraesCS1A01G260000 chr2B 95.951 247 10 0 2079 2325 685568974 685568728 4.500000e-108 401.0
23 TraesCS1A01G260000 chr4B 84.942 259 35 3 1102 1358 77651296 77651552 2.860000e-65 259.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G260000 chr1A 453521717 453524614 2897 True 5352.000000 5352 100.000000 1 2898 1 chr1A.!!$R1 2897
1 TraesCS1A01G260000 chr1D 353556097 353558803 2706 True 905.425000 2830 91.455000 12 2898 4 chr1D.!!$R1 2886
2 TraesCS1A01G260000 chr1B 475468545 475471177 2632 True 1170.333333 2761 90.649333 39 2898 3 chr1B.!!$R1 2859

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
287 341 0.100861 GGGTGCGTACTCTACTCTGC 59.899 60.0 3.01 0.0 0.0 4.26 F
1353 1440 0.107361 TCGGCGTCATCTCTGTCCTA 60.107 55.0 6.85 0.0 0.0 2.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1506 1607 0.026803 CGCCTAGATGCAAAACTCGC 59.973 55.0 0.00 0.0 0.00 5.03 R
2404 2508 0.674269 TGCATGCATCGAACTCAGCA 60.674 50.0 18.46 0.0 41.73 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.935808 GGTCGTCACTTTCATACTCCATTT 59.064 41.667 0.00 0.00 0.00 2.32
83 89 2.302157 ACAGCCAAGTGGAGTAACTACC 59.698 50.000 0.18 0.00 37.39 3.18
103 109 5.720371 ACCATAGCTAGCTAGAGAACATG 57.280 43.478 27.42 19.45 31.45 3.21
104 110 5.389520 ACCATAGCTAGCTAGAGAACATGA 58.610 41.667 27.42 4.80 31.45 3.07
105 111 5.476599 ACCATAGCTAGCTAGAGAACATGAG 59.523 44.000 27.42 15.80 31.45 2.90
106 112 5.709631 CCATAGCTAGCTAGAGAACATGAGA 59.290 44.000 27.42 4.05 31.45 3.27
107 113 6.127925 CCATAGCTAGCTAGAGAACATGAGAG 60.128 46.154 27.42 6.25 31.45 3.20
108 114 5.047566 AGCTAGCTAGAGAACATGAGAGA 57.952 43.478 25.15 0.00 0.00 3.10
109 115 5.065914 AGCTAGCTAGAGAACATGAGAGAG 58.934 45.833 25.15 0.00 0.00 3.20
110 116 5.063204 GCTAGCTAGAGAACATGAGAGAGA 58.937 45.833 25.15 0.00 0.00 3.10
111 117 5.180117 GCTAGCTAGAGAACATGAGAGAGAG 59.820 48.000 25.15 0.00 0.00 3.20
112 118 5.372343 AGCTAGAGAACATGAGAGAGAGA 57.628 43.478 0.00 0.00 0.00 3.10
113 119 5.371526 AGCTAGAGAACATGAGAGAGAGAG 58.628 45.833 0.00 0.00 0.00 3.20
114 120 5.130975 AGCTAGAGAACATGAGAGAGAGAGA 59.869 44.000 0.00 0.00 0.00 3.10
115 121 5.468072 GCTAGAGAACATGAGAGAGAGAGAG 59.532 48.000 0.00 0.00 0.00 3.20
116 122 5.698741 AGAGAACATGAGAGAGAGAGAGA 57.301 43.478 0.00 0.00 0.00 3.10
117 123 5.678583 AGAGAACATGAGAGAGAGAGAGAG 58.321 45.833 0.00 0.00 0.00 3.20
118 124 5.426509 AGAGAACATGAGAGAGAGAGAGAGA 59.573 44.000 0.00 0.00 0.00 3.10
119 125 5.678583 AGAACATGAGAGAGAGAGAGAGAG 58.321 45.833 0.00 0.00 0.00 3.20
120 126 5.426509 AGAACATGAGAGAGAGAGAGAGAGA 59.573 44.000 0.00 0.00 0.00 3.10
121 127 5.287674 ACATGAGAGAGAGAGAGAGAGAG 57.712 47.826 0.00 0.00 0.00 3.20
122 128 4.964897 ACATGAGAGAGAGAGAGAGAGAGA 59.035 45.833 0.00 0.00 0.00 3.10
123 129 5.070180 ACATGAGAGAGAGAGAGAGAGAGAG 59.930 48.000 0.00 0.00 0.00 3.20
124 130 4.871822 TGAGAGAGAGAGAGAGAGAGAGA 58.128 47.826 0.00 0.00 0.00 3.10
125 131 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
126 132 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
127 133 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
128 134 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
129 135 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
208 261 2.737039 CGAGGAAAAGTAGCAGAGAGGC 60.737 54.545 0.00 0.00 0.00 4.70
263 316 1.134220 AGCAGAAAACTTCGTCCCACA 60.134 47.619 0.00 0.00 34.02 4.17
287 341 0.100861 GGGTGCGTACTCTACTCTGC 59.899 60.000 3.01 0.00 0.00 4.26
358 418 4.406003 TGTTCTTCTCTCCCTTATGCTACC 59.594 45.833 0.00 0.00 0.00 3.18
391 451 1.727335 CTCGCCGACTTCTTTCTTTCC 59.273 52.381 0.00 0.00 0.00 3.13
418 478 7.890515 AGTTCTTTGATTCTTTGATTTCCTCC 58.109 34.615 0.00 0.00 0.00 4.30
439 499 1.133823 TGCTTCTTTCTTGGTGCCTGA 60.134 47.619 0.00 0.00 0.00 3.86
442 502 2.260844 TCTTTCTTGGTGCCTGACTG 57.739 50.000 0.00 0.00 0.00 3.51
530 595 3.416156 CCTCCTATTGCCCTCTTATTGC 58.584 50.000 0.00 0.00 0.00 3.56
561 626 0.958091 CTTGCGTTGTTGGATGGGAA 59.042 50.000 0.00 0.00 0.00 3.97
562 627 1.545582 CTTGCGTTGTTGGATGGGAAT 59.454 47.619 0.00 0.00 0.00 3.01
564 629 0.173255 GCGTTGTTGGATGGGAATGG 59.827 55.000 0.00 0.00 0.00 3.16
565 630 0.817013 CGTTGTTGGATGGGAATGGG 59.183 55.000 0.00 0.00 0.00 4.00
566 631 1.615651 CGTTGTTGGATGGGAATGGGA 60.616 52.381 0.00 0.00 0.00 4.37
567 632 2.750814 GTTGTTGGATGGGAATGGGAT 58.249 47.619 0.00 0.00 0.00 3.85
568 633 3.686978 CGTTGTTGGATGGGAATGGGATA 60.687 47.826 0.00 0.00 0.00 2.59
569 634 3.882102 TGTTGGATGGGAATGGGATAG 57.118 47.619 0.00 0.00 0.00 2.08
570 635 2.158475 TGTTGGATGGGAATGGGATAGC 60.158 50.000 0.00 0.00 0.00 2.97
571 636 1.831835 TGGATGGGAATGGGATAGCA 58.168 50.000 0.00 0.00 0.00 3.49
572 637 1.706866 TGGATGGGAATGGGATAGCAG 59.293 52.381 0.00 0.00 0.00 4.24
573 638 1.707427 GGATGGGAATGGGATAGCAGT 59.293 52.381 0.00 0.00 0.00 4.40
574 639 2.912956 GGATGGGAATGGGATAGCAGTA 59.087 50.000 0.00 0.00 0.00 2.74
575 640 3.054802 GGATGGGAATGGGATAGCAGTAG 60.055 52.174 0.00 0.00 0.00 2.57
576 641 2.338809 TGGGAATGGGATAGCAGTAGG 58.661 52.381 0.00 0.00 0.00 3.18
577 642 1.003696 GGGAATGGGATAGCAGTAGGC 59.996 57.143 0.00 0.00 45.30 3.93
593 658 3.204827 GCAGTAGCCCATGTGCGG 61.205 66.667 0.00 0.00 36.02 5.69
621 686 3.207669 CCAAGGCGCATGCTCTCC 61.208 66.667 17.13 13.68 42.25 3.71
623 688 3.720601 AAGGCGCATGCTCTCCCA 61.721 61.111 17.13 0.00 42.25 4.37
624 689 3.984193 AAGGCGCATGCTCTCCCAC 62.984 63.158 17.13 0.00 42.25 4.61
626 691 2.894387 GCGCATGCTCTCCCACTC 60.894 66.667 17.13 0.00 38.39 3.51
630 709 0.469070 GCATGCTCTCCCACTCTGAT 59.531 55.000 11.37 0.00 0.00 2.90
655 734 7.112779 TGAGAAGGAAACTAAAATCAGGATCC 58.887 38.462 2.48 2.48 42.68 3.36
656 735 7.032598 AGAAGGAAACTAAAATCAGGATCCA 57.967 36.000 15.82 0.00 42.68 3.41
657 736 7.470192 AGAAGGAAACTAAAATCAGGATCCAA 58.530 34.615 15.82 1.25 42.68 3.53
661 747 6.095580 GGAAACTAAAATCAGGATCCAAGGAC 59.904 42.308 15.82 0.00 0.00 3.85
662 748 5.117406 ACTAAAATCAGGATCCAAGGACC 57.883 43.478 15.82 0.00 0.00 4.46
692 779 8.879759 TCGGTGAACAAATAAATTCTACTGATC 58.120 33.333 0.00 0.00 0.00 2.92
716 803 4.511454 TGTCTCGACCATTTTTGTCAAGAG 59.489 41.667 0.00 0.00 26.96 2.85
717 804 4.750098 GTCTCGACCATTTTTGTCAAGAGA 59.250 41.667 0.00 0.00 26.96 3.10
721 808 7.659799 TCTCGACCATTTTTGTCAAGAGAAATA 59.340 33.333 0.00 0.00 30.98 1.40
733 820 8.906636 TGTCAAGAGAAATATACAGTTACGTC 57.093 34.615 0.00 0.00 0.00 4.34
749 836 9.712359 ACAGTTACGTCAAGTTTTTCTAATTTC 57.288 29.630 0.00 0.00 0.00 2.17
779 866 6.926272 AGGTATCGAAGAATAATCTGCACTTC 59.074 38.462 0.00 0.00 43.58 3.01
958 1045 4.463891 TCTTTCTTGCTTGGGATTTGGATC 59.536 41.667 0.00 0.00 0.00 3.36
959 1046 3.744940 TCTTGCTTGGGATTTGGATCT 57.255 42.857 0.00 0.00 32.66 2.75
989 1076 0.971447 AGGAAGCTAGACCGACCCAC 60.971 60.000 0.00 0.00 0.00 4.61
1020 1107 3.838271 GCCTCCTCATCGGCGTCA 61.838 66.667 6.85 0.00 36.45 4.35
1035 1122 1.413767 CGTCATCGTTTCCAGGCTCG 61.414 60.000 0.00 0.00 0.00 5.03
1197 1284 0.878961 ACAACCCGCAGAAGTTCGTC 60.879 55.000 0.00 0.00 0.00 4.20
1347 1434 3.402691 CTGCGTCGGCGTCATCTCT 62.403 63.158 12.58 0.00 44.10 3.10
1353 1440 0.107361 TCGGCGTCATCTCTGTCCTA 60.107 55.000 6.85 0.00 0.00 2.94
1388 1475 1.988956 AGCTCCAGCAGGACCTCAG 60.989 63.158 0.48 0.00 45.16 3.35
1437 1524 9.705103 AAGTACCAGGTAGTAATTATGTACTCA 57.295 33.333 7.44 0.00 37.32 3.41
1455 1542 8.146479 TGTACTCAATGATAGAATGCATCAAC 57.854 34.615 0.00 0.00 36.08 3.18
1506 1607 3.408150 GAATTTGCTCGTCTTAACTGCG 58.592 45.455 0.00 0.00 0.00 5.18
1508 1609 1.614227 TTGCTCGTCTTAACTGCGCG 61.614 55.000 0.00 0.00 0.00 6.86
1558 1659 4.436998 GTCTCGGCGTCTGTGGGG 62.437 72.222 6.85 0.00 0.00 4.96
1952 2054 1.791103 TTTGGCAGGTTCGGCTTTCG 61.791 55.000 0.00 0.00 40.90 3.46
1976 2078 3.244976 GCCACACATGCTCAATTGTTAC 58.755 45.455 5.13 0.00 0.00 2.50
2028 2130 2.483876 TGCAGTATTCTATTGCGCTCC 58.516 47.619 9.73 0.00 43.44 4.70
2035 2137 6.372659 CAGTATTCTATTGCGCTCCCATATTT 59.627 38.462 9.73 0.00 0.00 1.40
2036 2138 7.549134 CAGTATTCTATTGCGCTCCCATATTTA 59.451 37.037 9.73 0.00 0.00 1.40
2088 2190 9.913310 TTTCATATGGTATAGTCATGGTTTTCA 57.087 29.630 2.13 0.00 0.00 2.69
2089 2191 9.913310 TTCATATGGTATAGTCATGGTTTTCAA 57.087 29.630 2.13 0.00 0.00 2.69
2094 2196 8.642935 TGGTATAGTCATGGTTTTCAATTTCA 57.357 30.769 0.00 0.00 0.00 2.69
2095 2197 8.739039 TGGTATAGTCATGGTTTTCAATTTCAG 58.261 33.333 0.00 0.00 0.00 3.02
2096 2198 8.739972 GGTATAGTCATGGTTTTCAATTTCAGT 58.260 33.333 0.00 0.00 0.00 3.41
2099 2201 9.696917 ATAGTCATGGTTTTCAATTTCAGTTTC 57.303 29.630 0.00 0.00 0.00 2.78
2100 2202 7.555087 AGTCATGGTTTTCAATTTCAGTTTCA 58.445 30.769 0.00 0.00 0.00 2.69
2101 2203 7.707893 AGTCATGGTTTTCAATTTCAGTTTCAG 59.292 33.333 0.00 0.00 0.00 3.02
2102 2204 7.706179 GTCATGGTTTTCAATTTCAGTTTCAGA 59.294 33.333 0.00 0.00 0.00 3.27
2103 2205 8.256605 TCATGGTTTTCAATTTCAGTTTCAGAA 58.743 29.630 0.00 0.00 0.00 3.02
2104 2206 8.545420 CATGGTTTTCAATTTCAGTTTCAGAAG 58.455 33.333 0.00 0.00 0.00 2.85
2105 2207 7.835822 TGGTTTTCAATTTCAGTTTCAGAAGA 58.164 30.769 0.00 0.00 0.00 2.87
2106 2208 8.310382 TGGTTTTCAATTTCAGTTTCAGAAGAA 58.690 29.630 0.00 0.00 0.00 2.52
2107 2209 9.317936 GGTTTTCAATTTCAGTTTCAGAAGAAT 57.682 29.630 0.00 0.00 32.89 2.40
2112 2214 9.740239 TCAATTTCAGTTTCAGAAGAATTTCAG 57.260 29.630 0.00 0.00 35.70 3.02
2113 2215 8.485591 CAATTTCAGTTTCAGAAGAATTTCAGC 58.514 33.333 0.00 0.00 35.70 4.26
2114 2216 6.698008 TTCAGTTTCAGAAGAATTTCAGCA 57.302 33.333 0.00 0.00 35.70 4.41
2115 2217 6.064846 TCAGTTTCAGAAGAATTTCAGCAC 57.935 37.500 0.00 0.00 35.70 4.40
2116 2218 5.009010 TCAGTTTCAGAAGAATTTCAGCACC 59.991 40.000 0.00 0.00 35.70 5.01
2117 2219 4.889409 AGTTTCAGAAGAATTTCAGCACCA 59.111 37.500 0.00 0.00 35.70 4.17
2118 2220 5.360714 AGTTTCAGAAGAATTTCAGCACCAA 59.639 36.000 0.00 0.00 35.70 3.67
2119 2221 4.836125 TCAGAAGAATTTCAGCACCAAC 57.164 40.909 0.00 0.00 35.70 3.77
2120 2222 3.569701 TCAGAAGAATTTCAGCACCAACC 59.430 43.478 0.00 0.00 35.70 3.77
2121 2223 2.554032 AGAAGAATTTCAGCACCAACCG 59.446 45.455 0.00 0.00 35.70 4.44
2122 2224 2.270352 AGAATTTCAGCACCAACCGA 57.730 45.000 0.00 0.00 0.00 4.69
2123 2225 2.582052 AGAATTTCAGCACCAACCGAA 58.418 42.857 0.00 0.00 0.00 4.30
2124 2226 2.955660 AGAATTTCAGCACCAACCGAAA 59.044 40.909 0.00 0.00 0.00 3.46
2125 2227 3.573967 AGAATTTCAGCACCAACCGAAAT 59.426 39.130 0.00 0.00 39.20 2.17
2126 2228 3.575965 ATTTCAGCACCAACCGAAATC 57.424 42.857 0.00 0.00 33.87 2.17
2127 2229 1.974265 TTCAGCACCAACCGAAATCA 58.026 45.000 0.00 0.00 0.00 2.57
2128 2230 1.234821 TCAGCACCAACCGAAATCAC 58.765 50.000 0.00 0.00 0.00 3.06
2129 2231 1.202758 TCAGCACCAACCGAAATCACT 60.203 47.619 0.00 0.00 0.00 3.41
2130 2232 1.069022 CAGCACCAACCGAAATCACTG 60.069 52.381 0.00 0.00 0.00 3.66
2131 2233 1.202758 AGCACCAACCGAAATCACTGA 60.203 47.619 0.00 0.00 0.00 3.41
2132 2234 1.606668 GCACCAACCGAAATCACTGAA 59.393 47.619 0.00 0.00 0.00 3.02
2133 2235 2.034053 GCACCAACCGAAATCACTGAAA 59.966 45.455 0.00 0.00 0.00 2.69
2134 2236 3.305335 GCACCAACCGAAATCACTGAAAT 60.305 43.478 0.00 0.00 0.00 2.17
2135 2237 4.795962 GCACCAACCGAAATCACTGAAATT 60.796 41.667 0.00 0.00 0.00 1.82
2136 2238 4.917415 CACCAACCGAAATCACTGAAATTC 59.083 41.667 0.00 0.00 0.00 2.17
2137 2239 4.582656 ACCAACCGAAATCACTGAAATTCA 59.417 37.500 0.00 0.00 0.00 2.57
2138 2240 5.068460 ACCAACCGAAATCACTGAAATTCAA 59.932 36.000 0.00 0.00 0.00 2.69
2139 2241 6.158598 CCAACCGAAATCACTGAAATTCAAT 58.841 36.000 0.00 0.00 0.00 2.57
2140 2242 6.089820 CCAACCGAAATCACTGAAATTCAATG 59.910 38.462 0.00 0.00 0.00 2.82
2141 2243 6.573664 ACCGAAATCACTGAAATTCAATGA 57.426 33.333 9.62 9.62 37.03 2.57
2142 2244 6.980593 ACCGAAATCACTGAAATTCAATGAA 58.019 32.000 11.22 0.00 36.16 2.57
2143 2245 7.605449 ACCGAAATCACTGAAATTCAATGAAT 58.395 30.769 11.22 2.07 36.16 2.57
2144 2246 8.090214 ACCGAAATCACTGAAATTCAATGAATT 58.910 29.630 14.86 14.86 43.07 2.17
2161 2263 9.467258 TCAATGAATTTCAGTGATTTCAGTTTC 57.533 29.630 21.86 6.34 45.10 2.78
2162 2264 8.706035 CAATGAATTTCAGTGATTTCAGTTTCC 58.294 33.333 19.31 0.00 44.38 3.13
2163 2265 7.345422 TGAATTTCAGTGATTTCAGTTTCCA 57.655 32.000 12.59 0.00 0.00 3.53
2164 2266 7.954835 TGAATTTCAGTGATTTCAGTTTCCAT 58.045 30.769 12.59 0.00 0.00 3.41
2165 2267 8.423349 TGAATTTCAGTGATTTCAGTTTCCATT 58.577 29.630 12.59 0.00 0.00 3.16
2166 2268 9.264719 GAATTTCAGTGATTTCAGTTTCCATTT 57.735 29.630 10.09 0.00 0.00 2.32
2167 2269 8.822652 ATTTCAGTGATTTCAGTTTCCATTTC 57.177 30.769 0.00 0.00 0.00 2.17
2168 2270 6.957920 TCAGTGATTTCAGTTTCCATTTCA 57.042 33.333 0.00 0.00 0.00 2.69
2169 2271 6.973843 TCAGTGATTTCAGTTTCCATTTCAG 58.026 36.000 0.00 0.00 0.00 3.02
2170 2272 5.632347 CAGTGATTTCAGTTTCCATTTCAGC 59.368 40.000 0.00 0.00 0.00 4.26
2171 2273 4.925646 GTGATTTCAGTTTCCATTTCAGCC 59.074 41.667 0.00 0.00 0.00 4.85
2172 2274 4.588106 TGATTTCAGTTTCCATTTCAGCCA 59.412 37.500 0.00 0.00 0.00 4.75
2173 2275 5.070180 TGATTTCAGTTTCCATTTCAGCCAA 59.930 36.000 0.00 0.00 0.00 4.52
2174 2276 5.350504 TTTCAGTTTCCATTTCAGCCAAA 57.649 34.783 0.00 0.00 0.00 3.28
2175 2277 5.549742 TTCAGTTTCCATTTCAGCCAAAT 57.450 34.783 0.00 0.00 34.79 2.32
2184 2286 4.806640 ATTTCAGCCAAATGACCGAAAT 57.193 36.364 0.00 0.00 33.07 2.17
2185 2287 5.913137 ATTTCAGCCAAATGACCGAAATA 57.087 34.783 0.00 0.00 33.07 1.40
2186 2288 5.913137 TTTCAGCCAAATGACCGAAATAT 57.087 34.783 0.00 0.00 0.00 1.28
2187 2289 5.913137 TTCAGCCAAATGACCGAAATATT 57.087 34.783 0.00 0.00 0.00 1.28
2188 2290 5.499139 TCAGCCAAATGACCGAAATATTC 57.501 39.130 0.00 0.00 0.00 1.75
2189 2291 4.946772 TCAGCCAAATGACCGAAATATTCA 59.053 37.500 0.00 0.00 0.00 2.57
2190 2292 5.036737 CAGCCAAATGACCGAAATATTCAC 58.963 41.667 0.00 0.00 0.00 3.18
2191 2293 4.949856 AGCCAAATGACCGAAATATTCACT 59.050 37.500 0.00 0.00 0.00 3.41
2192 2294 5.418840 AGCCAAATGACCGAAATATTCACTT 59.581 36.000 0.00 0.00 0.00 3.16
2193 2295 5.516339 GCCAAATGACCGAAATATTCACTTG 59.484 40.000 0.00 0.00 0.00 3.16
2194 2296 6.624861 GCCAAATGACCGAAATATTCACTTGA 60.625 38.462 0.00 0.00 29.95 3.02
2195 2297 7.312154 CCAAATGACCGAAATATTCACTTGAA 58.688 34.615 0.00 0.00 38.56 2.69
2196 2298 7.975616 CCAAATGACCGAAATATTCACTTGAAT 59.024 33.333 9.37 9.37 45.77 2.57
2197 2299 9.357652 CAAATGACCGAAATATTCACTTGAATT 57.642 29.630 9.68 0.00 41.64 2.17
2198 2300 9.573133 AAATGACCGAAATATTCACTTGAATTC 57.427 29.630 9.68 0.00 41.64 2.17
2199 2301 7.680442 TGACCGAAATATTCACTTGAATTCA 57.320 32.000 9.68 3.38 41.64 2.57
2200 2302 8.105097 TGACCGAAATATTCACTTGAATTCAA 57.895 30.769 19.45 19.45 41.64 2.69
2201 2303 8.739039 TGACCGAAATATTCACTTGAATTCAAT 58.261 29.630 20.76 8.72 41.64 2.57
2202 2304 9.573133 GACCGAAATATTCACTTGAATTCAATT 57.427 29.630 20.76 13.01 41.64 2.32
2254 2356 9.727627 TTTTGAAAAATATTGGAATTGTTGTGC 57.272 25.926 0.00 0.00 0.00 4.57
2255 2357 8.674263 TTGAAAAATATTGGAATTGTTGTGCT 57.326 26.923 0.00 0.00 0.00 4.40
2256 2358 9.770097 TTGAAAAATATTGGAATTGTTGTGCTA 57.230 25.926 0.00 0.00 0.00 3.49
2257 2359 9.941325 TGAAAAATATTGGAATTGTTGTGCTAT 57.059 25.926 0.00 0.00 0.00 2.97
2262 2364 8.978874 ATATTGGAATTGTTGTGCTATACTGA 57.021 30.769 0.00 0.00 0.00 3.41
2263 2365 7.701539 ATTGGAATTGTTGTGCTATACTGAA 57.298 32.000 0.00 0.00 0.00 3.02
2264 2366 7.517614 TTGGAATTGTTGTGCTATACTGAAA 57.482 32.000 0.00 0.00 0.00 2.69
2265 2367 7.701539 TGGAATTGTTGTGCTATACTGAAAT 57.298 32.000 0.00 0.00 0.00 2.17
2266 2368 8.121305 TGGAATTGTTGTGCTATACTGAAATT 57.879 30.769 0.00 0.00 0.00 1.82
2267 2369 8.584157 TGGAATTGTTGTGCTATACTGAAATTT 58.416 29.630 0.00 0.00 0.00 1.82
2268 2370 9.076596 GGAATTGTTGTGCTATACTGAAATTTC 57.923 33.333 11.41 11.41 0.00 2.17
2269 2371 9.846248 GAATTGTTGTGCTATACTGAAATTTCT 57.154 29.630 18.64 2.61 0.00 2.52
2270 2372 9.630098 AATTGTTGTGCTATACTGAAATTTCTG 57.370 29.630 19.97 19.97 0.00 3.02
2271 2373 7.977789 TGTTGTGCTATACTGAAATTTCTGA 57.022 32.000 26.21 13.40 0.00 3.27
2272 2374 8.389779 TGTTGTGCTATACTGAAATTTCTGAA 57.610 30.769 26.21 13.03 0.00 3.02
2273 2375 8.845227 TGTTGTGCTATACTGAAATTTCTGAAA 58.155 29.630 26.21 16.06 0.00 2.69
2274 2376 9.846248 GTTGTGCTATACTGAAATTTCTGAAAT 57.154 29.630 26.21 20.28 0.00 2.17
2283 2385 8.552083 ACTGAAATTTCTGAAATATTTTGGCC 57.448 30.769 26.21 0.00 0.00 5.36
2284 2386 8.156165 ACTGAAATTTCTGAAATATTTTGGCCA 58.844 29.630 26.21 0.00 0.00 5.36
2285 2387 8.915057 TGAAATTTCTGAAATATTTTGGCCAA 57.085 26.923 16.05 16.05 0.00 4.52
2286 2388 9.347240 TGAAATTTCTGAAATATTTTGGCCAAA 57.653 25.926 27.13 27.13 0.00 3.28
2288 2390 9.964303 AAATTTCTGAAATATTTTGGCCAAAAC 57.036 25.926 38.97 27.41 42.32 2.43
2289 2391 6.777526 TTCTGAAATATTTTGGCCAAAACG 57.222 33.333 38.97 22.55 42.32 3.60
2290 2392 5.848406 TCTGAAATATTTTGGCCAAAACGT 58.152 33.333 38.97 28.33 42.32 3.99
2291 2393 6.982852 TCTGAAATATTTTGGCCAAAACGTA 58.017 32.000 38.97 29.35 42.32 3.57
2292 2394 7.434492 TCTGAAATATTTTGGCCAAAACGTAA 58.566 30.769 38.97 26.08 42.32 3.18
2293 2395 8.091449 TCTGAAATATTTTGGCCAAAACGTAAT 58.909 29.630 38.97 27.03 42.32 1.89
2294 2396 9.360093 CTGAAATATTTTGGCCAAAACGTAATA 57.640 29.630 38.97 28.09 42.32 0.98
2295 2397 9.877178 TGAAATATTTTGGCCAAAACGTAATAT 57.123 25.926 38.97 28.85 42.32 1.28
2299 2401 9.877178 ATATTTTGGCCAAAACGTAATATTTCA 57.123 25.926 38.97 17.80 42.32 2.69
2300 2402 8.608844 ATTTTGGCCAAAACGTAATATTTCAA 57.391 26.923 38.97 17.38 42.32 2.69
2301 2403 8.608844 TTTTGGCCAAAACGTAATATTTCAAT 57.391 26.923 34.56 0.00 35.57 2.57
2302 2404 7.588143 TTGGCCAAAACGTAATATTTCAATG 57.412 32.000 17.98 0.00 0.00 2.82
2303 2405 6.692486 TGGCCAAAACGTAATATTTCAATGT 58.308 32.000 0.61 0.00 0.00 2.71
2304 2406 6.809196 TGGCCAAAACGTAATATTTCAATGTC 59.191 34.615 0.61 0.00 0.00 3.06
2305 2407 7.033185 GGCCAAAACGTAATATTTCAATGTCT 58.967 34.615 0.00 0.00 0.00 3.41
2306 2408 7.009174 GGCCAAAACGTAATATTTCAATGTCTG 59.991 37.037 0.00 0.00 0.00 3.51
2307 2409 7.462724 GCCAAAACGTAATATTTCAATGTCTGC 60.463 37.037 0.00 0.00 0.00 4.26
2308 2410 7.754924 CCAAAACGTAATATTTCAATGTCTGCT 59.245 33.333 0.00 0.00 0.00 4.24
2309 2411 8.577939 CAAAACGTAATATTTCAATGTCTGCTG 58.422 33.333 0.00 0.00 0.00 4.41
2310 2412 7.609760 AACGTAATATTTCAATGTCTGCTGA 57.390 32.000 0.00 0.00 0.00 4.26
2311 2413 7.609760 ACGTAATATTTCAATGTCTGCTGAA 57.390 32.000 0.00 0.00 0.00 3.02
2312 2414 8.039603 ACGTAATATTTCAATGTCTGCTGAAA 57.960 30.769 0.00 0.00 43.63 2.69
2314 2416 9.507280 CGTAATATTTCAATGTCTGCTGAAATT 57.493 29.630 13.48 8.59 45.54 1.82
2319 2421 7.509141 TTTCAATGTCTGCTGAAATTACTGA 57.491 32.000 8.54 1.33 36.79 3.41
2320 2422 7.509141 TTCAATGTCTGCTGAAATTACTGAA 57.491 32.000 8.54 6.90 29.50 3.02
2321 2423 7.509141 TCAATGTCTGCTGAAATTACTGAAA 57.491 32.000 8.54 0.00 29.50 2.69
2322 2424 8.114331 TCAATGTCTGCTGAAATTACTGAAAT 57.886 30.769 8.54 0.00 29.50 2.17
2323 2425 8.579006 TCAATGTCTGCTGAAATTACTGAAATT 58.421 29.630 8.54 0.00 39.56 1.82
2324 2426 8.857216 CAATGTCTGCTGAAATTACTGAAATTC 58.143 33.333 8.54 0.00 36.76 2.17
2325 2427 6.602179 TGTCTGCTGAAATTACTGAAATTCG 58.398 36.000 0.00 0.00 36.76 3.34
2326 2428 6.426633 TGTCTGCTGAAATTACTGAAATTCGA 59.573 34.615 0.00 0.00 36.76 3.71
2327 2429 7.119699 TGTCTGCTGAAATTACTGAAATTCGAT 59.880 33.333 0.00 0.00 36.76 3.59
2328 2430 7.965107 GTCTGCTGAAATTACTGAAATTCGATT 59.035 33.333 0.00 0.00 36.76 3.34
2329 2431 8.177663 TCTGCTGAAATTACTGAAATTCGATTC 58.822 33.333 0.00 0.00 36.76 2.52
2330 2432 7.815641 TGCTGAAATTACTGAAATTCGATTCA 58.184 30.769 1.74 1.74 36.76 2.57
2331 2433 7.750458 TGCTGAAATTACTGAAATTCGATTCAC 59.250 33.333 0.00 0.00 36.76 3.18
2332 2434 7.965107 GCTGAAATTACTGAAATTCGATTCACT 59.035 33.333 0.00 0.00 36.76 3.41
2333 2435 9.270576 CTGAAATTACTGAAATTCGATTCACTG 57.729 33.333 0.00 0.00 36.76 3.66
2334 2436 8.998377 TGAAATTACTGAAATTCGATTCACTGA 58.002 29.630 0.00 0.00 36.76 3.41
2335 2437 9.825972 GAAATTACTGAAATTCGATTCACTGAA 57.174 29.630 0.00 0.00 36.76 3.02
2337 2439 9.831737 AATTACTGAAATTCGATTCACTGAAAG 57.168 29.630 0.00 0.00 34.23 2.62
2353 2455 5.982890 CTGAAAGTGAAAACCATGGGTAT 57.017 39.130 18.09 0.14 33.12 2.73
2355 2457 7.088589 CTGAAAGTGAAAACCATGGGTATAG 57.911 40.000 18.09 0.00 33.12 1.31
2364 2466 7.392113 TGAAAACCATGGGTATAGTAAACACAG 59.608 37.037 18.09 0.00 32.83 3.66
2396 2498 1.055849 TTCACACCAGGAAGCTAGCA 58.944 50.000 18.83 0.00 0.00 3.49
2397 2499 0.321671 TCACACCAGGAAGCTAGCAC 59.678 55.000 18.83 10.38 0.00 4.40
2398 2500 0.322975 CACACCAGGAAGCTAGCACT 59.677 55.000 18.83 9.15 0.00 4.40
2399 2501 0.322975 ACACCAGGAAGCTAGCACTG 59.677 55.000 18.83 19.95 0.00 3.66
2404 2508 4.039730 CACCAGGAAGCTAGCACTGTATAT 59.960 45.833 23.60 10.37 0.00 0.86
2521 2664 5.532779 TGTTGGTTTGCTCATTGTACATACA 59.467 36.000 0.00 0.00 0.00 2.29
2598 2741 2.136298 TGCTTCCTGTTGAACACCAA 57.864 45.000 0.00 0.00 0.00 3.67
2669 2812 9.028284 ACATTCCAATGAACAATTTATCTGACT 57.972 29.630 6.29 0.00 39.67 3.41
2670 2813 9.865321 CATTCCAATGAACAATTTATCTGACTT 57.135 29.630 0.00 0.00 38.70 3.01
2728 2871 3.997762 ACGTGTAGCACATGTAGGAAAA 58.002 40.909 0.00 0.00 45.70 2.29
2729 2872 3.744426 ACGTGTAGCACATGTAGGAAAAC 59.256 43.478 0.00 0.00 45.70 2.43
2774 2917 6.700081 CGATCGTTCCATCTTTAATTAGGTGA 59.300 38.462 7.03 0.00 0.00 4.02
2809 2954 6.701841 GGAAGTATCGAAGAAACAGCATATCA 59.298 38.462 0.00 0.00 43.58 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.417580 ACTTGGCTGTTTGTTGTAGAGAAAA 59.582 36.000 0.00 0.00 0.00 2.29
83 89 6.654582 TCTCTCATGTTCTCTAGCTAGCTATG 59.345 42.308 24.36 18.04 0.00 2.23
103 109 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
104 110 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
105 111 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
106 112 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
107 113 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
108 114 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
109 115 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
110 116 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
111 117 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
112 118 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
113 119 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
114 120 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
115 121 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
116 122 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
117 123 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
118 124 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
119 125 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
120 126 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
121 127 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
122 128 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
123 129 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
124 130 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
125 131 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
126 132 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
127 133 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
128 134 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
129 135 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
208 261 3.918220 GCGCGCTGACCTGAATCG 61.918 66.667 26.67 0.00 0.00 3.34
263 316 2.754002 GAGTAGAGTACGCACCCTTTCT 59.246 50.000 0.00 0.00 0.00 2.52
306 360 4.021916 AGAAGGAAGCAAATGGATCCAAG 58.978 43.478 20.67 12.95 34.30 3.61
351 411 5.415221 CGAGAAAGAAGAAGAAGGTAGCAT 58.585 41.667 0.00 0.00 0.00 3.79
358 418 2.664085 GTCGGCGAGAAAGAAGAAGAAG 59.336 50.000 11.20 0.00 0.00 2.85
418 478 1.268899 CAGGCACCAAGAAAGAAGCAG 59.731 52.381 0.00 0.00 0.00 4.24
442 502 9.591792 ACCATAAAAGACGTAGGATTAGTTAAC 57.408 33.333 0.00 0.00 0.00 2.01
513 578 9.107177 CAATATAGAGCAATAAGAGGGCAATAG 57.893 37.037 0.00 0.00 0.00 1.73
530 595 6.479990 TCCAACAACGCAAGATCAATATAGAG 59.520 38.462 0.00 0.00 43.62 2.43
561 626 2.109229 ACTGCCTACTGCTATCCCAT 57.891 50.000 0.00 0.00 42.00 4.00
562 627 2.598565 CTACTGCCTACTGCTATCCCA 58.401 52.381 0.00 0.00 42.00 4.37
564 629 2.734276 GCTACTGCCTACTGCTATCC 57.266 55.000 0.00 0.00 42.00 2.59
576 641 3.204827 CCGCACATGGGCTACTGC 61.205 66.667 19.64 5.99 38.76 4.40
577 642 1.522355 CTCCGCACATGGGCTACTG 60.522 63.158 19.64 1.40 0.00 2.74
608 673 4.479993 AGTGGGAGAGCATGCGCC 62.480 66.667 18.40 17.03 39.83 6.53
621 686 4.550076 AGTTTCCTTCTCATCAGAGTGG 57.450 45.455 0.00 0.00 42.66 4.00
623 688 8.378565 TGATTTTAGTTTCCTTCTCATCAGAGT 58.621 33.333 0.00 0.00 42.66 3.24
624 689 8.783833 TGATTTTAGTTTCCTTCTCATCAGAG 57.216 34.615 0.00 0.00 43.48 3.35
626 691 7.826252 TCCTGATTTTAGTTTCCTTCTCATCAG 59.174 37.037 0.00 0.00 0.00 2.90
630 709 7.112779 GGATCCTGATTTTAGTTTCCTTCTCA 58.887 38.462 3.84 0.00 0.00 3.27
661 747 9.072294 GTAGAATTTATTTGTTCACCGATTTGG 57.928 33.333 0.00 0.00 46.41 3.28
662 748 9.840427 AGTAGAATTTATTTGTTCACCGATTTG 57.160 29.630 0.00 0.00 0.00 2.32
692 779 4.511454 TCTTGACAAAAATGGTCGAGACAG 59.489 41.667 8.11 0.00 46.06 3.51
749 836 6.743627 GCAGATTATTCTTCGATACCTCTACG 59.256 42.308 0.00 0.00 0.00 3.51
779 866 5.411977 CAGATGGCATGAAGCTATTCTAAGG 59.588 44.000 3.81 0.00 45.31 2.69
1020 1107 1.079127 CACCGAGCCTGGAAACGAT 60.079 57.895 0.00 0.00 0.00 3.73
1388 1475 3.627218 GTTCGTATCTGGCGCGGC 61.627 66.667 27.61 27.61 0.00 6.53
1435 1522 8.913487 ATACAGTTGATGCATTCTATCATTGA 57.087 30.769 0.00 0.00 34.76 2.57
1506 1607 0.026803 CGCCTAGATGCAAAACTCGC 59.973 55.000 0.00 0.00 0.00 5.03
1508 1609 0.378610 GCCGCCTAGATGCAAAACTC 59.621 55.000 0.00 0.00 0.00 3.01
1693 1794 2.516460 CTCCTGGCCAGCATCTGC 60.516 66.667 28.39 0.00 42.49 4.26
1777 1878 0.687920 TGGCTGATGTGTACCCGAAA 59.312 50.000 0.00 0.00 0.00 3.46
1867 1968 4.436998 GTGTGCCTCTCGTCCCCG 62.437 72.222 0.00 0.00 0.00 5.73
1899 2000 2.831742 TCGGATCGAACGGAGGGG 60.832 66.667 12.07 0.00 31.06 4.79
1903 2004 1.033202 TGGATGTCGGATCGAACGGA 61.033 55.000 12.07 5.99 37.72 4.69
1904 2005 0.032130 ATGGATGTCGGATCGAACGG 59.968 55.000 12.07 3.62 37.72 4.44
1905 2006 1.409412 GATGGATGTCGGATCGAACG 58.591 55.000 6.55 6.55 37.72 3.95
1952 2054 2.063266 CAATTGAGCATGTGTGGCAAC 58.937 47.619 0.00 0.00 0.00 4.17
2077 2179 7.780064 TCTGAAACTGAAATTGAAAACCATGA 58.220 30.769 0.00 0.00 0.00 3.07
2078 2180 8.422973 TTCTGAAACTGAAATTGAAAACCATG 57.577 30.769 0.00 0.00 0.00 3.66
2079 2181 8.477256 TCTTCTGAAACTGAAATTGAAAACCAT 58.523 29.630 0.00 0.00 0.00 3.55
2080 2182 7.835822 TCTTCTGAAACTGAAATTGAAAACCA 58.164 30.769 0.00 0.00 0.00 3.67
2081 2183 8.702163 TTCTTCTGAAACTGAAATTGAAAACC 57.298 30.769 0.00 0.00 0.00 3.27
2086 2188 9.740239 CTGAAATTCTTCTGAAACTGAAATTGA 57.260 29.630 0.00 0.00 35.63 2.57
2087 2189 8.485591 GCTGAAATTCTTCTGAAACTGAAATTG 58.514 33.333 0.00 0.00 35.63 2.32
2088 2190 8.199449 TGCTGAAATTCTTCTGAAACTGAAATT 58.801 29.630 0.00 0.00 35.63 1.82
2089 2191 7.650903 GTGCTGAAATTCTTCTGAAACTGAAAT 59.349 33.333 0.00 0.00 35.63 2.17
2090 2192 6.974622 GTGCTGAAATTCTTCTGAAACTGAAA 59.025 34.615 0.00 0.00 35.63 2.69
2091 2193 6.460123 GGTGCTGAAATTCTTCTGAAACTGAA 60.460 38.462 0.00 0.00 35.63 3.02
2092 2194 5.009010 GGTGCTGAAATTCTTCTGAAACTGA 59.991 40.000 0.00 0.00 35.63 3.41
2093 2195 5.218139 GGTGCTGAAATTCTTCTGAAACTG 58.782 41.667 0.00 0.00 35.63 3.16
2094 2196 4.889409 TGGTGCTGAAATTCTTCTGAAACT 59.111 37.500 0.00 0.00 35.63 2.66
2095 2197 5.186996 TGGTGCTGAAATTCTTCTGAAAC 57.813 39.130 0.00 0.00 35.63 2.78
2096 2198 5.451798 GGTTGGTGCTGAAATTCTTCTGAAA 60.452 40.000 0.00 0.00 35.63 2.69
2097 2199 4.037923 GGTTGGTGCTGAAATTCTTCTGAA 59.962 41.667 0.00 0.00 33.51 3.02
2098 2200 3.569701 GGTTGGTGCTGAAATTCTTCTGA 59.430 43.478 0.00 0.00 33.51 3.27
2099 2201 3.610114 CGGTTGGTGCTGAAATTCTTCTG 60.610 47.826 0.00 0.00 34.51 3.02
2100 2202 2.554032 CGGTTGGTGCTGAAATTCTTCT 59.446 45.455 0.00 0.00 32.33 2.85
2101 2203 2.552315 TCGGTTGGTGCTGAAATTCTTC 59.448 45.455 0.00 0.00 0.00 2.87
2102 2204 2.582052 TCGGTTGGTGCTGAAATTCTT 58.418 42.857 0.00 0.00 0.00 2.52
2103 2205 2.270352 TCGGTTGGTGCTGAAATTCT 57.730 45.000 0.00 0.00 0.00 2.40
2104 2206 3.363341 TTTCGGTTGGTGCTGAAATTC 57.637 42.857 0.00 0.00 38.41 2.17
2107 2209 2.034053 GTGATTTCGGTTGGTGCTGAAA 59.966 45.455 3.06 3.06 44.68 2.69
2108 2210 1.606668 GTGATTTCGGTTGGTGCTGAA 59.393 47.619 0.00 0.00 32.46 3.02
2109 2211 1.202758 AGTGATTTCGGTTGGTGCTGA 60.203 47.619 0.00 0.00 0.00 4.26
2110 2212 1.069022 CAGTGATTTCGGTTGGTGCTG 60.069 52.381 0.00 0.00 0.00 4.41
2111 2213 1.202758 TCAGTGATTTCGGTTGGTGCT 60.203 47.619 0.00 0.00 0.00 4.40
2112 2214 1.234821 TCAGTGATTTCGGTTGGTGC 58.765 50.000 0.00 0.00 0.00 5.01
2113 2215 3.980646 TTTCAGTGATTTCGGTTGGTG 57.019 42.857 0.00 0.00 0.00 4.17
2114 2216 4.582656 TGAATTTCAGTGATTTCGGTTGGT 59.417 37.500 0.00 0.00 0.00 3.67
2115 2217 5.119931 TGAATTTCAGTGATTTCGGTTGG 57.880 39.130 0.00 0.00 0.00 3.77
2116 2218 6.862608 TCATTGAATTTCAGTGATTTCGGTTG 59.137 34.615 17.65 1.32 38.05 3.77
2117 2219 6.980593 TCATTGAATTTCAGTGATTTCGGTT 58.019 32.000 17.65 0.00 38.05 4.44
2118 2220 6.573664 TCATTGAATTTCAGTGATTTCGGT 57.426 33.333 17.65 0.00 38.05 4.69
2119 2221 8.470040 AATTCATTGAATTTCAGTGATTTCGG 57.530 30.769 20.93 0.00 41.66 4.30
2132 2234 9.991906 ACTGAAATCACTGAAATTCATTGAATT 57.008 25.926 17.73 17.03 43.07 2.17
2133 2235 9.991906 AACTGAAATCACTGAAATTCATTGAAT 57.008 25.926 17.73 8.74 39.09 2.57
2134 2236 9.820725 AAACTGAAATCACTGAAATTCATTGAA 57.179 25.926 17.73 0.75 39.09 2.69
2135 2237 9.467258 GAAACTGAAATCACTGAAATTCATTGA 57.533 29.630 16.46 16.46 39.76 2.57
2136 2238 8.706035 GGAAACTGAAATCACTGAAATTCATTG 58.294 33.333 6.96 6.96 31.92 2.82
2137 2239 8.423349 TGGAAACTGAAATCACTGAAATTCATT 58.577 29.630 0.00 0.00 31.92 2.57
2138 2240 7.954835 TGGAAACTGAAATCACTGAAATTCAT 58.045 30.769 0.00 0.00 31.92 2.57
2139 2241 7.345422 TGGAAACTGAAATCACTGAAATTCA 57.655 32.000 0.00 0.00 0.00 2.57
2140 2242 8.822652 AATGGAAACTGAAATCACTGAAATTC 57.177 30.769 0.00 0.00 0.00 2.17
2141 2243 9.264719 GAAATGGAAACTGAAATCACTGAAATT 57.735 29.630 0.00 0.00 0.00 1.82
2142 2244 8.423349 TGAAATGGAAACTGAAATCACTGAAAT 58.577 29.630 0.00 0.00 0.00 2.17
2143 2245 7.780064 TGAAATGGAAACTGAAATCACTGAAA 58.220 30.769 0.00 0.00 0.00 2.69
2144 2246 7.345422 TGAAATGGAAACTGAAATCACTGAA 57.655 32.000 0.00 0.00 0.00 3.02
2145 2247 6.515531 GCTGAAATGGAAACTGAAATCACTGA 60.516 38.462 0.00 0.00 0.00 3.41
2146 2248 5.632347 GCTGAAATGGAAACTGAAATCACTG 59.368 40.000 0.00 0.00 0.00 3.66
2147 2249 5.279156 GGCTGAAATGGAAACTGAAATCACT 60.279 40.000 0.00 0.00 0.00 3.41
2148 2250 4.925646 GGCTGAAATGGAAACTGAAATCAC 59.074 41.667 0.00 0.00 0.00 3.06
2149 2251 4.588106 TGGCTGAAATGGAAACTGAAATCA 59.412 37.500 0.00 0.00 0.00 2.57
2150 2252 5.138125 TGGCTGAAATGGAAACTGAAATC 57.862 39.130 0.00 0.00 0.00 2.17
2151 2253 5.549742 TTGGCTGAAATGGAAACTGAAAT 57.450 34.783 0.00 0.00 0.00 2.17
2152 2254 5.350504 TTTGGCTGAAATGGAAACTGAAA 57.649 34.783 0.00 0.00 0.00 2.69
2153 2255 5.299148 CATTTGGCTGAAATGGAAACTGAA 58.701 37.500 11.68 0.00 45.06 3.02
2154 2256 4.885413 CATTTGGCTGAAATGGAAACTGA 58.115 39.130 11.68 0.00 45.06 3.41
2158 2260 8.359821 TTTCGGTCATTTGGCTGAAATGGAAA 62.360 38.462 13.66 15.05 46.47 3.13
2159 2261 6.962304 TTTCGGTCATTTGGCTGAAATGGAA 61.962 40.000 13.66 11.66 46.47 3.53
2160 2262 5.531829 TTTCGGTCATTTGGCTGAAATGGA 61.532 41.667 13.66 7.83 46.47 3.41
2161 2263 3.305950 TTTCGGTCATTTGGCTGAAATGG 60.306 43.478 13.66 6.22 46.47 3.16
2162 2264 3.911868 TTTCGGTCATTTGGCTGAAATG 58.088 40.909 13.66 12.79 46.47 2.32
2165 2267 5.417266 TGAATATTTCGGTCATTTGGCTGAA 59.583 36.000 2.35 2.35 42.66 3.02
2166 2268 4.946772 TGAATATTTCGGTCATTTGGCTGA 59.053 37.500 0.00 0.00 32.40 4.26
2167 2269 5.036737 GTGAATATTTCGGTCATTTGGCTG 58.963 41.667 0.00 0.00 0.00 4.85
2168 2270 4.949856 AGTGAATATTTCGGTCATTTGGCT 59.050 37.500 0.00 0.00 0.00 4.75
2169 2271 5.248870 AGTGAATATTTCGGTCATTTGGC 57.751 39.130 0.00 0.00 0.00 4.52
2170 2272 6.851609 TCAAGTGAATATTTCGGTCATTTGG 58.148 36.000 8.75 0.00 38.68 3.28
2171 2273 8.915871 ATTCAAGTGAATATTTCGGTCATTTG 57.084 30.769 4.71 4.16 42.48 2.32
2172 2274 9.573133 GAATTCAAGTGAATATTTCGGTCATTT 57.427 29.630 6.95 0.00 43.41 2.32
2173 2275 8.739039 TGAATTCAAGTGAATATTTCGGTCATT 58.261 29.630 5.45 0.00 43.41 2.57
2174 2276 8.279970 TGAATTCAAGTGAATATTTCGGTCAT 57.720 30.769 5.45 0.00 43.41 3.06
2175 2277 7.680442 TGAATTCAAGTGAATATTTCGGTCA 57.320 32.000 5.45 3.23 43.41 4.02
2176 2278 9.573133 AATTGAATTCAAGTGAATATTTCGGTC 57.427 29.630 24.17 0.85 43.41 4.79
2228 2330 9.727627 GCACAACAATTCCAATATTTTTCAAAA 57.272 25.926 0.00 0.00 0.00 2.44
2229 2331 9.118300 AGCACAACAATTCCAATATTTTTCAAA 57.882 25.926 0.00 0.00 0.00 2.69
2230 2332 8.674263 AGCACAACAATTCCAATATTTTTCAA 57.326 26.923 0.00 0.00 0.00 2.69
2231 2333 9.941325 ATAGCACAACAATTCCAATATTTTTCA 57.059 25.926 0.00 0.00 0.00 2.69
2236 2338 9.407380 TCAGTATAGCACAACAATTCCAATATT 57.593 29.630 0.00 0.00 0.00 1.28
2237 2339 8.978874 TCAGTATAGCACAACAATTCCAATAT 57.021 30.769 0.00 0.00 0.00 1.28
2238 2340 8.800370 TTCAGTATAGCACAACAATTCCAATA 57.200 30.769 0.00 0.00 0.00 1.90
2239 2341 7.701539 TTCAGTATAGCACAACAATTCCAAT 57.298 32.000 0.00 0.00 0.00 3.16
2240 2342 7.517614 TTTCAGTATAGCACAACAATTCCAA 57.482 32.000 0.00 0.00 0.00 3.53
2241 2343 7.701539 ATTTCAGTATAGCACAACAATTCCA 57.298 32.000 0.00 0.00 0.00 3.53
2242 2344 8.986477 AAATTTCAGTATAGCACAACAATTCC 57.014 30.769 0.00 0.00 0.00 3.01
2243 2345 9.846248 AGAAATTTCAGTATAGCACAACAATTC 57.154 29.630 19.99 0.00 0.00 2.17
2244 2346 9.630098 CAGAAATTTCAGTATAGCACAACAATT 57.370 29.630 19.99 0.00 0.00 2.32
2245 2347 9.013229 TCAGAAATTTCAGTATAGCACAACAAT 57.987 29.630 19.99 0.00 0.00 2.71
2246 2348 8.389779 TCAGAAATTTCAGTATAGCACAACAA 57.610 30.769 19.99 0.00 0.00 2.83
2247 2349 7.977789 TCAGAAATTTCAGTATAGCACAACA 57.022 32.000 19.99 0.00 0.00 3.33
2248 2350 9.846248 ATTTCAGAAATTTCAGTATAGCACAAC 57.154 29.630 19.99 0.00 0.00 3.32
2257 2359 9.651913 GGCCAAAATATTTCAGAAATTTCAGTA 57.348 29.630 19.99 3.43 32.38 2.74
2258 2360 8.156165 TGGCCAAAATATTTCAGAAATTTCAGT 58.844 29.630 19.99 0.00 32.38 3.41
2259 2361 8.550710 TGGCCAAAATATTTCAGAAATTTCAG 57.449 30.769 19.99 12.35 32.38 3.02
2260 2362 8.915057 TTGGCCAAAATATTTCAGAAATTTCA 57.085 26.923 17.98 0.00 32.38 2.69
2262 2364 9.964303 GTTTTGGCCAAAATATTTCAGAAATTT 57.036 25.926 38.65 3.40 41.64 1.82
2263 2365 8.288913 CGTTTTGGCCAAAATATTTCAGAAATT 58.711 29.630 38.65 0.00 41.64 1.82
2264 2366 7.443879 ACGTTTTGGCCAAAATATTTCAGAAAT 59.556 29.630 38.65 13.06 41.64 2.17
2265 2367 6.763610 ACGTTTTGGCCAAAATATTTCAGAAA 59.236 30.769 38.65 15.68 41.64 2.52
2266 2368 6.284459 ACGTTTTGGCCAAAATATTTCAGAA 58.716 32.000 38.65 16.18 41.64 3.02
2267 2369 5.848406 ACGTTTTGGCCAAAATATTTCAGA 58.152 33.333 38.65 16.89 41.64 3.27
2268 2370 7.644986 TTACGTTTTGGCCAAAATATTTCAG 57.355 32.000 38.65 25.66 41.64 3.02
2269 2371 9.877178 ATATTACGTTTTGGCCAAAATATTTCA 57.123 25.926 38.65 25.10 41.64 2.69
2273 2375 9.877178 TGAAATATTACGTTTTGGCCAAAATAT 57.123 25.926 38.65 31.01 41.64 1.28
2274 2376 9.706691 TTGAAATATTACGTTTTGGCCAAAATA 57.293 25.926 38.65 28.13 41.64 1.40
2275 2377 8.608844 TTGAAATATTACGTTTTGGCCAAAAT 57.391 26.923 38.65 28.36 41.64 1.82
2276 2378 8.499162 CATTGAAATATTACGTTTTGGCCAAAA 58.501 29.630 34.56 34.56 37.90 2.44
2277 2379 7.657761 ACATTGAAATATTACGTTTTGGCCAAA 59.342 29.630 27.13 27.13 0.00 3.28
2278 2380 7.155328 ACATTGAAATATTACGTTTTGGCCAA 58.845 30.769 16.05 16.05 0.00 4.52
2279 2381 6.692486 ACATTGAAATATTACGTTTTGGCCA 58.308 32.000 0.00 0.00 0.00 5.36
2280 2382 7.009174 CAGACATTGAAATATTACGTTTTGGCC 59.991 37.037 0.00 0.00 0.00 5.36
2281 2383 7.462724 GCAGACATTGAAATATTACGTTTTGGC 60.463 37.037 0.00 0.00 0.00 4.52
2282 2384 7.754924 AGCAGACATTGAAATATTACGTTTTGG 59.245 33.333 0.00 0.00 0.00 3.28
2283 2385 8.577939 CAGCAGACATTGAAATATTACGTTTTG 58.422 33.333 0.00 0.00 0.00 2.44
2284 2386 8.511321 TCAGCAGACATTGAAATATTACGTTTT 58.489 29.630 0.00 0.00 0.00 2.43
2285 2387 8.039603 TCAGCAGACATTGAAATATTACGTTT 57.960 30.769 0.00 0.00 0.00 3.60
2286 2388 7.609760 TCAGCAGACATTGAAATATTACGTT 57.390 32.000 0.00 0.00 0.00 3.99
2287 2389 7.609760 TTCAGCAGACATTGAAATATTACGT 57.390 32.000 0.00 0.00 30.84 3.57
2295 2397 7.509141 TCAGTAATTTCAGCAGACATTGAAA 57.491 32.000 1.11 0.43 44.60 2.69
2296 2398 7.509141 TTCAGTAATTTCAGCAGACATTGAA 57.491 32.000 1.11 0.00 0.00 2.69
2297 2399 7.509141 TTTCAGTAATTTCAGCAGACATTGA 57.491 32.000 1.11 0.00 0.00 2.57
2298 2400 8.752766 AATTTCAGTAATTTCAGCAGACATTG 57.247 30.769 1.11 0.00 32.48 2.82
2299 2401 7.752239 CGAATTTCAGTAATTTCAGCAGACATT 59.248 33.333 0.00 0.00 36.59 2.71
2300 2402 7.119699 TCGAATTTCAGTAATTTCAGCAGACAT 59.880 33.333 0.00 0.00 36.59 3.06
2301 2403 6.426633 TCGAATTTCAGTAATTTCAGCAGACA 59.573 34.615 0.00 0.00 36.59 3.41
2302 2404 6.831769 TCGAATTTCAGTAATTTCAGCAGAC 58.168 36.000 0.00 0.00 36.59 3.51
2303 2405 7.615582 ATCGAATTTCAGTAATTTCAGCAGA 57.384 32.000 0.00 0.00 36.59 4.26
2304 2406 7.964559 TGAATCGAATTTCAGTAATTTCAGCAG 59.035 33.333 0.00 0.00 36.59 4.24
2305 2407 7.750458 GTGAATCGAATTTCAGTAATTTCAGCA 59.250 33.333 1.71 0.00 36.59 4.41
2306 2408 7.965107 AGTGAATCGAATTTCAGTAATTTCAGC 59.035 33.333 7.21 0.00 37.47 4.26
2307 2409 9.270576 CAGTGAATCGAATTTCAGTAATTTCAG 57.729 33.333 8.42 0.00 37.20 3.02
2308 2410 8.998377 TCAGTGAATCGAATTTCAGTAATTTCA 58.002 29.630 8.42 0.00 37.20 2.69
2309 2411 9.825972 TTCAGTGAATCGAATTTCAGTAATTTC 57.174 29.630 8.42 0.00 37.20 2.17
2311 2413 9.831737 CTTTCAGTGAATCGAATTTCAGTAATT 57.168 29.630 6.36 0.00 37.20 1.40
2312 2414 9.003658 ACTTTCAGTGAATCGAATTTCAGTAAT 57.996 29.630 6.36 0.00 37.20 1.89
2313 2415 8.378172 ACTTTCAGTGAATCGAATTTCAGTAA 57.622 30.769 6.36 1.72 37.20 2.24
2314 2416 7.962964 ACTTTCAGTGAATCGAATTTCAGTA 57.037 32.000 6.36 0.00 37.20 2.74
2315 2417 6.867662 ACTTTCAGTGAATCGAATTTCAGT 57.132 33.333 6.36 2.78 39.33 3.41
2328 2430 4.873945 ACCCATGGTTTTCACTTTCAGTGA 60.874 41.667 11.73 2.34 42.92 3.41
2329 2431 3.384467 ACCCATGGTTTTCACTTTCAGTG 59.616 43.478 11.73 0.00 39.28 3.66
2330 2432 3.642141 ACCCATGGTTTTCACTTTCAGT 58.358 40.909 11.73 0.00 27.29 3.41
2331 2433 5.982890 ATACCCATGGTTTTCACTTTCAG 57.017 39.130 11.73 0.00 37.09 3.02
2332 2434 6.548321 ACTATACCCATGGTTTTCACTTTCA 58.452 36.000 11.73 0.00 37.09 2.69
2333 2435 8.570068 TTACTATACCCATGGTTTTCACTTTC 57.430 34.615 11.73 0.00 37.09 2.62
2334 2436 8.799367 GTTTACTATACCCATGGTTTTCACTTT 58.201 33.333 11.73 0.00 37.09 2.66
2335 2437 7.945664 TGTTTACTATACCCATGGTTTTCACTT 59.054 33.333 11.73 0.00 37.09 3.16
2336 2438 7.392393 GTGTTTACTATACCCATGGTTTTCACT 59.608 37.037 11.73 0.00 37.09 3.41
2337 2439 7.175293 TGTGTTTACTATACCCATGGTTTTCAC 59.825 37.037 11.73 6.55 37.09 3.18
2338 2440 7.232188 TGTGTTTACTATACCCATGGTTTTCA 58.768 34.615 11.73 0.00 37.09 2.69
2339 2441 7.392393 ACTGTGTTTACTATACCCATGGTTTTC 59.608 37.037 11.73 0.00 37.09 2.29
2340 2442 7.235804 ACTGTGTTTACTATACCCATGGTTTT 58.764 34.615 11.73 0.00 37.09 2.43
2341 2443 6.786122 ACTGTGTTTACTATACCCATGGTTT 58.214 36.000 11.73 0.00 37.09 3.27
2342 2444 6.382919 ACTGTGTTTACTATACCCATGGTT 57.617 37.500 11.73 0.00 37.09 3.67
2343 2445 6.670902 ACTACTGTGTTTACTATACCCATGGT 59.329 38.462 11.73 1.30 40.16 3.55
2344 2446 7.120923 ACTACTGTGTTTACTATACCCATGG 57.879 40.000 4.14 4.14 0.00 3.66
2345 2447 8.910944 AGTACTACTGTGTTTACTATACCCATG 58.089 37.037 0.00 0.00 0.00 3.66
2346 2448 9.129532 GAGTACTACTGTGTTTACTATACCCAT 57.870 37.037 0.00 0.00 0.00 4.00
2347 2449 8.331740 AGAGTACTACTGTGTTTACTATACCCA 58.668 37.037 0.00 0.00 0.00 4.51
2348 2450 8.744568 AGAGTACTACTGTGTTTACTATACCC 57.255 38.462 0.00 0.00 0.00 3.69
2394 2496 3.706698 TCGAACTCAGCATATACAGTGC 58.293 45.455 0.00 0.00 42.81 4.40
2396 2498 4.202151 TGCATCGAACTCAGCATATACAGT 60.202 41.667 0.00 0.00 31.05 3.55
2397 2499 4.301628 TGCATCGAACTCAGCATATACAG 58.698 43.478 0.00 0.00 31.05 2.74
2398 2500 4.320608 TGCATCGAACTCAGCATATACA 57.679 40.909 0.00 0.00 31.05 2.29
2399 2501 4.435253 GCATGCATCGAACTCAGCATATAC 60.435 45.833 14.21 3.41 45.14 1.47
2404 2508 0.674269 TGCATGCATCGAACTCAGCA 60.674 50.000 18.46 0.00 41.73 4.41
2521 2664 6.711277 TGAAAGTACACTCCTGATTATGCTT 58.289 36.000 0.00 0.00 0.00 3.91
2525 2668 7.907389 TGAGTTGAAAGTACACTCCTGATTAT 58.093 34.615 7.59 0.00 0.00 1.28
2685 2828 5.851177 CGTACAGTTGCCTAAGAAATTGTTG 59.149 40.000 0.00 0.00 30.15 3.33
2728 2871 8.380644 CGATCGATAAACTGAGTTACAAAATGT 58.619 33.333 10.26 0.00 0.00 2.71
2729 2872 8.380644 ACGATCGATAAACTGAGTTACAAAATG 58.619 33.333 24.34 0.00 0.00 2.32
2774 2917 9.983804 GTTTCTTCGATACTTCCGAAAATAAAT 57.016 29.630 0.00 0.00 44.08 1.40
2785 2930 7.700322 TGATATGCTGTTTCTTCGATACTTC 57.300 36.000 0.00 0.00 0.00 3.01
2791 2936 6.154203 AGAGATGATATGCTGTTTCTTCGA 57.846 37.500 0.00 0.00 0.00 3.71
2809 2954 8.274322 TGTTTTATTACCATGACCATGAGAGAT 58.726 33.333 11.28 3.43 41.20 2.75
2864 3055 8.081633 CACACTCTTTTTGCATTCAAGGTTATA 58.918 33.333 0.00 0.00 33.12 0.98
2865 3056 6.925165 CACACTCTTTTTGCATTCAAGGTTAT 59.075 34.615 0.00 0.00 33.12 1.89
2866 3057 6.127479 ACACACTCTTTTTGCATTCAAGGTTA 60.127 34.615 0.00 0.00 33.12 2.85
2867 3058 5.111293 CACACTCTTTTTGCATTCAAGGTT 58.889 37.500 0.00 0.00 33.12 3.50
2874 3065 3.490761 CGGGAACACACTCTTTTTGCATT 60.491 43.478 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.