Multiple sequence alignment - TraesCS1A01G259700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G259700 chr1A 100.000 4513 0 0 1 4513 452787584 452783072 0.000000e+00 8335.0
1 TraesCS1A01G259700 chr1B 86.970 2264 180 62 1 2222 474667038 474664848 0.000000e+00 2440.0
2 TraesCS1A01G259700 chr1B 89.286 756 52 17 2948 3693 474659123 474658387 0.000000e+00 920.0
3 TraesCS1A01G259700 chr1B 84.364 825 91 10 3691 4513 474657020 474656232 0.000000e+00 774.0
4 TraesCS1A01G259700 chr1B 91.603 524 30 6 1 512 474669811 474669290 0.000000e+00 712.0
5 TraesCS1A01G259700 chr1B 90.476 525 36 6 1 512 474668890 474668367 0.000000e+00 680.0
6 TraesCS1A01G259700 chr1B 90.095 525 38 6 1 512 474667964 474667441 0.000000e+00 669.0
7 TraesCS1A01G259700 chr1B 100.000 29 0 0 386 414 566460865 566460837 2.000000e-03 54.7
8 TraesCS1A01G259700 chr1D 89.702 1709 102 35 4 1686 352397928 352396268 0.000000e+00 2113.0
9 TraesCS1A01G259700 chr1D 91.657 827 54 8 3691 4513 352393985 352393170 0.000000e+00 1131.0
10 TraesCS1A01G259700 chr1D 93.237 621 29 8 3076 3693 352395104 352394494 0.000000e+00 902.0
11 TraesCS1A01G259700 chr1D 94.297 263 14 1 2625 2887 2467266 2467527 7.030000e-108 401.0
12 TraesCS1A01G259700 chr1D 93.284 268 16 2 2621 2887 99802977 99803243 1.180000e-105 394.0
13 TraesCS1A01G259700 chr1D 93.585 265 15 2 2624 2887 473768517 473768254 1.180000e-105 394.0
14 TraesCS1A01G259700 chr1D 84.536 291 37 5 2337 2623 352395623 352395337 9.560000e-72 281.0
15 TraesCS1A01G259700 chr7D 93.382 272 15 3 2618 2887 534621537 534621807 2.530000e-107 399.0
16 TraesCS1A01G259700 chr7D 93.382 272 14 4 2619 2887 610709905 610710175 2.530000e-107 399.0
17 TraesCS1A01G259700 chr7D 92.910 268 16 3 2622 2887 568379505 568379771 1.970000e-103 387.0
18 TraesCS1A01G259700 chr7D 92.308 273 17 4 2620 2890 91121423 91121693 7.080000e-103 385.0
19 TraesCS1A01G259700 chr7D 77.138 643 123 12 3810 4447 214833258 214833881 7.180000e-93 351.0
20 TraesCS1A01G259700 chr5B 93.962 265 12 4 2625 2887 699407975 699407713 9.100000e-107 398.0
21 TraesCS1A01G259700 chr5B 75.779 706 154 16 3806 4504 270772644 270771949 1.550000e-89 340.0
22 TraesCS1A01G259700 chr5B 74.566 633 134 21 3829 4447 439347467 439346848 7.490000e-63 252.0
23 TraesCS1A01G259700 chr5B 73.672 433 86 19 3803 4229 577535198 577534788 4.710000e-30 143.0
24 TraesCS1A01G259700 chr3D 93.585 265 14 3 2625 2887 306014641 306014378 4.230000e-105 392.0
25 TraesCS1A01G259700 chr3D 74.114 649 151 15 3808 4446 550687443 550688084 7.490000e-63 252.0
26 TraesCS1A01G259700 chr3D 82.745 255 36 6 3803 4054 129514229 129514478 2.110000e-53 220.0
27 TraesCS1A01G259700 chr5D 77.760 625 123 15 3802 4421 234027248 234027861 1.980000e-98 370.0
28 TraesCS1A01G259700 chr5D 100.000 28 0 0 388 415 50772845 50772818 8.000000e-03 52.8
29 TraesCS1A01G259700 chr2B 75.171 729 144 27 3789 4505 576099986 576100689 4.380000e-80 309.0
30 TraesCS1A01G259700 chr4B 75.200 625 130 19 3875 4484 655783381 655783995 5.750000e-69 272.0
31 TraesCS1A01G259700 chr4A 78.276 290 54 9 4217 4502 463831283 463831567 1.290000e-40 178.0
32 TraesCS1A01G259700 chr4D 74.194 341 79 8 4175 4512 343563850 343563516 2.830000e-27 134.0
33 TraesCS1A01G259700 chr4D 87.037 108 14 0 3808 3915 394399348 394399455 6.130000e-24 122.0
34 TraesCS1A01G259700 chr5A 80.892 157 26 4 3801 3955 7165299 7165453 2.210000e-23 121.0
35 TraesCS1A01G259700 chr5A 100.000 28 0 0 388 415 40088533 40088506 8.000000e-03 52.8
36 TraesCS1A01G259700 chr6D 94.737 38 0 1 378 415 148801801 148801836 1.750000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G259700 chr1A 452783072 452787584 4512 True 8335.00 8335 100.000 1 4513 1 chr1A.!!$R1 4512
1 TraesCS1A01G259700 chr1B 474664848 474669811 4963 True 1125.25 2440 89.786 1 2222 4 chr1B.!!$R3 2221
2 TraesCS1A01G259700 chr1B 474656232 474659123 2891 True 847.00 920 86.825 2948 4513 2 chr1B.!!$R2 1565
3 TraesCS1A01G259700 chr1D 352393170 352397928 4758 True 1106.75 2113 89.783 4 4513 4 chr1D.!!$R2 4509
4 TraesCS1A01G259700 chr7D 214833258 214833881 623 False 351.00 351 77.138 3810 4447 1 chr7D.!!$F2 637
5 TraesCS1A01G259700 chr5B 270771949 270772644 695 True 340.00 340 75.779 3806 4504 1 chr5B.!!$R1 698
6 TraesCS1A01G259700 chr5B 439346848 439347467 619 True 252.00 252 74.566 3829 4447 1 chr5B.!!$R2 618
7 TraesCS1A01G259700 chr3D 550687443 550688084 641 False 252.00 252 74.114 3808 4446 1 chr3D.!!$F2 638
8 TraesCS1A01G259700 chr5D 234027248 234027861 613 False 370.00 370 77.760 3802 4421 1 chr5D.!!$F1 619
9 TraesCS1A01G259700 chr2B 576099986 576100689 703 False 309.00 309 75.171 3789 4505 1 chr2B.!!$F1 716
10 TraesCS1A01G259700 chr4B 655783381 655783995 614 False 272.00 272 75.200 3875 4484 1 chr4B.!!$F1 609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 1.200760 AGCATGCAGACCCAGGTGTA 61.201 55.0 21.98 0.0 0.00 2.90 F
1310 4124 0.106167 CCACCGAGTCCCTCATCCTA 60.106 60.0 0.00 0.0 0.00 2.94 F
2614 5531 0.243365 TGCCAGCAATAGCCAAAACG 59.757 50.0 0.00 0.0 43.56 3.60 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1454 4268 0.376852 ACACACACGCACATGTTCAC 59.623 50.0 0.0 0.0 0.00 3.18 R
2689 5606 0.035056 ATGCAGAGGCCTGGTGTTAC 60.035 55.0 12.0 0.0 40.72 2.50 R
3736 8243 0.029834 GCATCATGCAATGGTCGGTC 59.970 55.0 4.2 0.0 46.73 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 6.300703 AGCTATATCTCACTCTTTACGAGGT 58.699 40.000 0.00 0.00 44.33 3.85
77 78 1.751924 GGTGGTAGCTCATCTCGTCTT 59.248 52.381 0.00 0.00 0.00 3.01
112 113 1.200760 AGCATGCAGACCCAGGTGTA 61.201 55.000 21.98 0.00 0.00 2.90
115 116 2.726821 CATGCAGACCCAGGTGTATTT 58.273 47.619 0.00 0.00 0.00 1.40
164 180 5.009310 ACCGGTTTGGACTAGTTGAAATTTC 59.991 40.000 11.41 11.41 42.00 2.17
171 187 3.395639 ACTAGTTGAAATTTCCGCGTGA 58.604 40.909 15.48 0.00 0.00 4.35
181 197 6.093495 TGAAATTTCCGCGTGATCTTTTCTAT 59.907 34.615 15.48 0.00 0.00 1.98
356 372 8.390354 ACATGATTATCAGTTTTCACATACACG 58.610 33.333 0.00 0.00 0.00 4.49
456 1395 8.877808 TTTTAACACACATTGAACATTATGCA 57.122 26.923 0.00 0.00 0.00 3.96
736 3529 6.660887 AACAAATTTTGAAATGCACGAACT 57.339 29.167 15.81 0.00 0.00 3.01
805 3599 6.629128 TGGTTGCGTGATGAAATATTTTGAT 58.371 32.000 1.43 0.00 0.00 2.57
975 3770 2.260869 GCGCTCAAGGCCTCAACAA 61.261 57.895 5.23 0.00 37.74 2.83
1009 3816 2.401592 CAGACGAGTCGAGCGAGG 59.598 66.667 21.50 2.86 34.09 4.63
1039 3847 5.124457 GCAAAATGATAAGCTTCAGGAGTGA 59.876 40.000 0.00 0.00 0.00 3.41
1040 3848 6.349611 GCAAAATGATAAGCTTCAGGAGTGAA 60.350 38.462 0.00 0.00 40.55 3.18
1182 3996 4.154347 CCTCCGTGCAGCTCTCCC 62.154 72.222 0.00 0.00 0.00 4.30
1310 4124 0.106167 CCACCGAGTCCCTCATCCTA 60.106 60.000 0.00 0.00 0.00 2.94
1322 4136 3.008485 CCCTCATCCTATACTTCAAGGCC 59.992 52.174 0.00 0.00 32.55 5.19
1367 4181 1.863155 TTCCCAAGATCACCCAGGCC 61.863 60.000 0.00 0.00 0.00 5.19
1378 4192 3.775654 CCAGGCCCTCGAGGTGAC 61.776 72.222 29.25 22.13 38.26 3.67
1379 4193 2.997315 CAGGCCCTCGAGGTGACA 60.997 66.667 29.25 0.00 38.26 3.58
1382 4196 1.153349 GGCCCTCGAGGTGACATTC 60.153 63.158 29.25 9.23 38.26 2.67
1383 4197 1.596934 GCCCTCGAGGTGACATTCA 59.403 57.895 29.25 0.00 38.26 2.57
1384 4198 0.741221 GCCCTCGAGGTGACATTCAC 60.741 60.000 29.25 4.13 46.23 3.18
1385 4199 0.898320 CCCTCGAGGTGACATTCACT 59.102 55.000 29.25 0.00 46.19 3.41
1386 4200 1.404717 CCCTCGAGGTGACATTCACTG 60.405 57.143 29.25 6.14 46.19 3.66
1387 4201 1.546029 CCTCGAGGTGACATTCACTGA 59.454 52.381 24.04 2.35 46.19 3.41
1388 4202 2.167281 CCTCGAGGTGACATTCACTGAT 59.833 50.000 24.04 0.00 46.19 2.90
1399 4213 7.274904 GGTGACATTCACTGATTGATTGATTTG 59.725 37.037 6.29 0.00 46.19 2.32
1454 4268 3.308866 GGTAAATCAACCGTCGATTGAGG 59.691 47.826 8.26 2.53 39.36 3.86
1487 4301 2.026262 GTGTGTGTTGTAGGGGATGGAT 60.026 50.000 0.00 0.00 0.00 3.41
1562 4379 2.220786 ATTTGCCCCCTCTGCTCCTG 62.221 60.000 0.00 0.00 0.00 3.86
1576 4393 3.009723 TGCTCCTGATTTTTCATCGTCC 58.990 45.455 0.00 0.00 0.00 4.79
1610 4428 9.278734 CTAGTATTCAGTGTGCACGTATATATG 57.721 37.037 13.13 0.12 36.20 1.78
1635 4462 6.020678 GTGCATTTCTTTTGCGTGGAATATAC 60.021 38.462 0.00 0.00 43.10 1.47
1636 4463 6.127758 TGCATTTCTTTTGCGTGGAATATACT 60.128 34.615 0.00 0.00 43.10 2.12
1638 4465 7.913297 GCATTTCTTTTGCGTGGAATATACTTA 59.087 33.333 0.00 0.00 0.00 2.24
1643 4470 7.985184 TCTTTTGCGTGGAATATACTTATCTGT 59.015 33.333 0.00 0.00 0.00 3.41
1644 4471 7.709269 TTTGCGTGGAATATACTTATCTGTC 57.291 36.000 0.00 0.00 0.00 3.51
1645 4472 6.650427 TGCGTGGAATATACTTATCTGTCT 57.350 37.500 0.00 0.00 0.00 3.41
1646 4473 7.754851 TGCGTGGAATATACTTATCTGTCTA 57.245 36.000 0.00 0.00 0.00 2.59
1688 4515 8.820831 ACCATTATCCCAATTTTGTAAACATGA 58.179 29.630 0.00 0.00 0.00 3.07
1689 4516 9.316730 CCATTATCCCAATTTTGTAAACATGAG 57.683 33.333 0.00 0.00 0.00 2.90
1692 4519 3.367630 CCCAATTTTGTAAACATGAGCGC 59.632 43.478 0.00 0.00 0.00 5.92
1693 4520 4.236935 CCAATTTTGTAAACATGAGCGCT 58.763 39.130 11.27 11.27 0.00 5.92
1704 4531 3.838795 TGAGCGCTCATGTGATCAA 57.161 47.368 35.30 10.27 44.61 2.57
1711 4538 5.061853 AGCGCTCATGTGATCAATCTATTT 58.938 37.500 2.64 0.00 0.00 1.40
1712 4539 5.178996 AGCGCTCATGTGATCAATCTATTTC 59.821 40.000 2.64 0.00 0.00 2.17
1713 4540 5.178996 GCGCTCATGTGATCAATCTATTTCT 59.821 40.000 0.00 0.00 0.00 2.52
1715 4542 6.423001 CGCTCATGTGATCAATCTATTTCTCA 59.577 38.462 0.00 0.00 0.00 3.27
1716 4543 7.359347 CGCTCATGTGATCAATCTATTTCTCAG 60.359 40.741 0.00 0.00 0.00 3.35
1717 4544 7.571613 GCTCATGTGATCAATCTATTTCTCAGC 60.572 40.741 0.00 0.00 0.00 4.26
1724 4551 6.688637 TCAATCTATTTCTCAGCCACATTG 57.311 37.500 0.00 0.00 0.00 2.82
1727 4554 7.280876 TCAATCTATTTCTCAGCCACATTGTAC 59.719 37.037 0.00 0.00 0.00 2.90
1728 4555 5.428253 TCTATTTCTCAGCCACATTGTACC 58.572 41.667 0.00 0.00 0.00 3.34
1729 4556 3.500448 TTTCTCAGCCACATTGTACCA 57.500 42.857 0.00 0.00 0.00 3.25
1758 4594 3.312421 GTGTACTCTGCAAGCACAAGAAA 59.688 43.478 6.68 0.00 0.00 2.52
1769 4606 3.820557 AGCACAAGAAAAGACTGCCTTA 58.179 40.909 0.00 0.00 34.00 2.69
1784 4621 1.066573 GCCTTACAAGCAGAGAGAGCA 60.067 52.381 0.00 0.00 0.00 4.26
1801 4638 7.880713 AGAGAGAGCATTATCGTCAGATAGTAA 59.119 37.037 0.00 0.00 40.15 2.24
1802 4639 8.039603 AGAGAGCATTATCGTCAGATAGTAAG 57.960 38.462 0.00 0.00 40.15 2.34
1803 4640 7.663905 AGAGAGCATTATCGTCAGATAGTAAGT 59.336 37.037 0.00 0.00 40.15 2.24
1804 4641 8.850007 AGAGCATTATCGTCAGATAGTAAGTA 57.150 34.615 0.00 0.00 40.15 2.24
1805 4642 8.941977 AGAGCATTATCGTCAGATAGTAAGTAG 58.058 37.037 0.00 0.00 40.15 2.57
1806 4643 8.624367 AGCATTATCGTCAGATAGTAAGTAGT 57.376 34.615 0.00 0.00 40.15 2.73
1807 4644 8.723311 AGCATTATCGTCAGATAGTAAGTAGTC 58.277 37.037 0.00 0.00 40.15 2.59
1808 4645 8.723311 GCATTATCGTCAGATAGTAAGTAGTCT 58.277 37.037 0.00 0.00 40.15 3.24
1810 4647 8.518151 TTATCGTCAGATAGTAAGTAGTCTCG 57.482 38.462 0.00 0.00 40.15 4.04
1811 4648 6.141560 TCGTCAGATAGTAAGTAGTCTCGA 57.858 41.667 0.00 0.00 0.00 4.04
1812 4649 6.747125 TCGTCAGATAGTAAGTAGTCTCGAT 58.253 40.000 0.00 0.00 0.00 3.59
1813 4650 7.880105 TCGTCAGATAGTAAGTAGTCTCGATA 58.120 38.462 0.00 0.00 0.00 2.92
1814 4651 8.022550 TCGTCAGATAGTAAGTAGTCTCGATAG 58.977 40.741 0.00 0.00 0.00 2.08
1815 4652 7.809331 CGTCAGATAGTAAGTAGTCTCGATAGT 59.191 40.741 0.00 0.00 37.40 2.12
1818 4655 9.577110 CAGATAGTAAGTAGTCTCGATAGTAGG 57.423 40.741 0.00 0.00 37.40 3.18
1825 4662 7.065120 AGTAGTCTCGATAGTAGGCTCTTAA 57.935 40.000 0.00 0.00 30.01 1.85
1828 4665 7.443259 AGTCTCGATAGTAGGCTCTTAATTC 57.557 40.000 0.00 0.00 37.40 2.17
1832 4669 7.825270 TCTCGATAGTAGGCTCTTAATTCTAGG 59.175 40.741 0.00 0.00 37.40 3.02
1836 4673 2.776665 AGGCTCTTAATTCTAGGCCCA 58.223 47.619 0.00 0.00 40.32 5.36
1840 4677 3.312697 GCTCTTAATTCTAGGCCCAAACG 59.687 47.826 0.00 0.00 0.00 3.60
1842 4679 5.367945 TCTTAATTCTAGGCCCAAACGAT 57.632 39.130 0.00 0.00 0.00 3.73
1843 4680 5.751586 TCTTAATTCTAGGCCCAAACGATT 58.248 37.500 0.00 0.00 0.00 3.34
1844 4681 6.184789 TCTTAATTCTAGGCCCAAACGATTT 58.815 36.000 0.00 0.00 0.00 2.17
1845 4682 6.661805 TCTTAATTCTAGGCCCAAACGATTTT 59.338 34.615 0.00 0.00 0.00 1.82
1846 4683 4.983671 ATTCTAGGCCCAAACGATTTTC 57.016 40.909 0.00 0.00 0.00 2.29
1853 4690 3.508402 GGCCCAAACGATTTTCTTTCCTA 59.492 43.478 0.00 0.00 0.00 2.94
1854 4691 4.482386 GCCCAAACGATTTTCTTTCCTAC 58.518 43.478 0.00 0.00 0.00 3.18
1856 4693 5.508320 GCCCAAACGATTTTCTTTCCTACAA 60.508 40.000 0.00 0.00 0.00 2.41
1858 4695 6.419710 CCCAAACGATTTTCTTTCCTACAAAC 59.580 38.462 0.00 0.00 0.00 2.93
1890 4727 6.994421 AAAGGAAAACCCACAAATGTCTAT 57.006 33.333 0.00 0.00 37.41 1.98
1892 4729 8.485578 AAAGGAAAACCCACAAATGTCTATAA 57.514 30.769 0.00 0.00 37.41 0.98
1914 4751 5.596836 ATTTCTTTTTGTCTGGCACTCAA 57.403 34.783 0.00 0.00 0.00 3.02
1962 4799 7.488322 AGAAAGCAAAACACAATTAGCTACAA 58.512 30.769 0.00 0.00 0.00 2.41
1965 4804 6.215845 AGCAAAACACAATTAGCTACAAAGG 58.784 36.000 0.00 0.00 0.00 3.11
1968 4807 6.952773 AAACACAATTAGCTACAAAGGTCA 57.047 33.333 0.00 0.00 34.60 4.02
1977 4816 2.498167 CTACAAAGGTCACTGCAAGCT 58.502 47.619 0.00 0.00 37.60 3.74
1979 4818 2.222027 ACAAAGGTCACTGCAAGCTAC 58.778 47.619 0.00 0.00 37.60 3.58
1981 4820 2.464157 AAGGTCACTGCAAGCTACTC 57.536 50.000 0.00 0.00 37.60 2.59
1996 4835 4.211920 AGCTACTCCTGTAATCCTGTCTC 58.788 47.826 0.00 0.00 0.00 3.36
2021 4860 4.299586 TGCTGACAGATTAACCATGGAA 57.700 40.909 21.47 2.96 0.00 3.53
2026 4865 8.217111 TGCTGACAGATTAACCATGGAAATATA 58.783 33.333 21.47 0.30 0.00 0.86
2046 4885 8.433249 AATATAATCAGGAGAGATGAGAGCAA 57.567 34.615 0.00 0.00 0.00 3.91
2061 4900 5.868257 TGAGAGCAACGCTGTATATTTTTG 58.132 37.500 0.00 0.00 39.88 2.44
2073 4912 9.277565 CGCTGTATATTTTTGTATCCATTATGC 57.722 33.333 0.00 0.00 0.00 3.14
2095 4934 7.576750 TGCTTATAAAAGTGAGTTGTAGTCG 57.423 36.000 0.00 0.00 34.99 4.18
2142 4981 0.762418 ACGGACAATGTGGTGAGGAA 59.238 50.000 0.00 0.00 0.00 3.36
2152 4991 2.241176 TGTGGTGAGGAACAAGGAAAGT 59.759 45.455 0.00 0.00 0.00 2.66
2171 5018 3.944087 AGTTCCTTGCAGTGGTTCTATC 58.056 45.455 7.55 0.00 0.00 2.08
2194 5041 3.854856 GGCACCTGGAAAGCACAA 58.145 55.556 0.00 0.00 0.00 3.33
2203 5050 3.999663 CCTGGAAAGCACAACAACAAAAA 59.000 39.130 0.00 0.00 0.00 1.94
2226 5073 8.964476 AAAATATCAGTTAGGTCACTATGTGG 57.036 34.615 0.00 0.00 33.87 4.17
2230 5122 6.525578 TCAGTTAGGTCACTATGTGGTAAG 57.474 41.667 0.00 0.00 33.87 2.34
2241 5133 6.379988 TCACTATGTGGTAAGCACTTATCTGA 59.620 38.462 2.57 0.00 33.87 3.27
2251 5143 9.162764 GGTAAGCACTTATCTGATTTTTCACTA 57.837 33.333 0.00 0.00 0.00 2.74
2254 5146 8.798859 AGCACTTATCTGATTTTTCACTATGT 57.201 30.769 0.00 0.00 0.00 2.29
2310 5223 6.590234 AAGTTGAAACTTGAAGACCACTTT 57.410 33.333 7.62 0.00 46.80 2.66
2312 5225 6.389906 AGTTGAAACTTGAAGACCACTTTTG 58.610 36.000 0.00 0.00 35.21 2.44
2315 5228 6.754193 TGAAACTTGAAGACCACTTTTGTTT 58.246 32.000 0.00 0.00 36.67 2.83
2316 5229 7.213678 TGAAACTTGAAGACCACTTTTGTTTT 58.786 30.769 0.00 0.00 35.54 2.43
2317 5230 7.713073 TGAAACTTGAAGACCACTTTTGTTTTT 59.287 29.630 0.00 0.00 35.54 1.94
2318 5231 9.198837 GAAACTTGAAGACCACTTTTGTTTTTA 57.801 29.630 0.00 0.00 35.54 1.52
2319 5232 9.719355 AAACTTGAAGACCACTTTTGTTTTTAT 57.281 25.926 0.00 0.00 36.39 1.40
2320 5233 9.719355 AACTTGAAGACCACTTTTGTTTTTATT 57.281 25.926 0.00 0.00 36.39 1.40
2321 5234 9.719355 ACTTGAAGACCACTTTTGTTTTTATTT 57.281 25.926 0.00 0.00 36.39 1.40
2322 5235 9.971744 CTTGAAGACCACTTTTGTTTTTATTTG 57.028 29.630 0.00 0.00 36.39 2.32
2323 5236 9.712305 TTGAAGACCACTTTTGTTTTTATTTGA 57.288 25.926 0.00 0.00 36.39 2.69
2324 5237 9.712305 TGAAGACCACTTTTGTTTTTATTTGAA 57.288 25.926 0.00 0.00 36.39 2.69
2365 5278 7.331026 ACAGATCAAGATCGAAACTCCAAATA 58.669 34.615 4.54 0.00 42.48 1.40
2378 5295 9.582431 CGAAACTCCAAATAGTTAAGATGTAGA 57.418 33.333 0.00 0.00 38.76 2.59
2404 5321 6.757897 AGTTCACACTGATTTCTTGACAAA 57.242 33.333 0.00 0.00 0.00 2.83
2405 5322 7.338800 AGTTCACACTGATTTCTTGACAAAT 57.661 32.000 0.00 0.00 0.00 2.32
2463 5380 9.490379 TCAAGTTTCCTCATACTTCTAAACTTC 57.510 33.333 7.76 0.00 42.27 3.01
2479 5396 7.871853 TCTAAACTTCATTTTCCTTACAGTGC 58.128 34.615 0.00 0.00 0.00 4.40
2492 5409 4.378459 CCTTACAGTGCGAGGAAATGAAAC 60.378 45.833 6.55 0.00 32.11 2.78
2495 5412 1.880027 AGTGCGAGGAAATGAAACACC 59.120 47.619 0.00 0.00 0.00 4.16
2496 5413 1.880027 GTGCGAGGAAATGAAACACCT 59.120 47.619 0.00 0.00 35.29 4.00
2497 5414 2.293399 GTGCGAGGAAATGAAACACCTT 59.707 45.455 0.00 0.00 32.53 3.50
2498 5415 2.552315 TGCGAGGAAATGAAACACCTTC 59.448 45.455 0.00 0.00 32.53 3.46
2513 5430 7.978975 TGAAACACCTTCATTTTCCTTAGTTTG 59.021 33.333 0.00 0.00 39.20 2.93
2514 5431 7.418337 AACACCTTCATTTTCCTTAGTTTGT 57.582 32.000 0.00 0.00 0.00 2.83
2522 5439 9.883142 TTCATTTTCCTTAGTTTGTTGAAACAT 57.117 25.926 0.00 0.00 43.51 2.71
2526 5443 6.633500 TCCTTAGTTTGTTGAAACATCCAG 57.367 37.500 0.00 0.00 43.51 3.86
2527 5444 6.361433 TCCTTAGTTTGTTGAAACATCCAGA 58.639 36.000 0.00 0.00 43.51 3.86
2571 5488 6.814146 TGTTTTGTTAGCCCAAAAAGTACAAG 59.186 34.615 7.78 0.00 43.68 3.16
2572 5489 6.777213 TTTGTTAGCCCAAAAAGTACAAGA 57.223 33.333 0.00 0.00 31.66 3.02
2573 5490 5.761165 TGTTAGCCCAAAAAGTACAAGAC 57.239 39.130 0.00 0.00 0.00 3.01
2601 5518 1.472878 GGGTTAAACTTAGCTGCCAGC 59.527 52.381 9.13 9.13 42.84 4.85
2604 5521 3.193479 GGTTAAACTTAGCTGCCAGCAAT 59.807 43.478 20.53 0.89 45.56 3.56
2606 5523 5.449177 GGTTAAACTTAGCTGCCAGCAATAG 60.449 44.000 20.53 14.39 45.56 1.73
2614 5531 0.243365 TGCCAGCAATAGCCAAAACG 59.757 50.000 0.00 0.00 43.56 3.60
2618 5535 1.720852 CAGCAATAGCCAAAACGTTGC 59.279 47.619 0.00 0.29 43.97 4.17
2619 5536 1.339610 AGCAATAGCCAAAACGTTGCA 59.660 42.857 0.00 0.00 45.54 4.08
2620 5537 1.720852 GCAATAGCCAAAACGTTGCAG 59.279 47.619 0.00 0.00 43.33 4.41
2621 5538 2.862140 GCAATAGCCAAAACGTTGCAGT 60.862 45.455 0.00 0.00 43.33 4.40
2622 5539 3.380142 CAATAGCCAAAACGTTGCAGTT 58.620 40.909 0.00 0.00 35.59 3.16
2623 5540 2.766970 TAGCCAAAACGTTGCAGTTC 57.233 45.000 0.00 0.00 32.43 3.01
2624 5541 1.102978 AGCCAAAACGTTGCAGTTCT 58.897 45.000 0.00 0.00 32.43 3.01
2625 5542 1.476488 AGCCAAAACGTTGCAGTTCTT 59.524 42.857 0.00 0.00 32.43 2.52
2626 5543 2.094234 AGCCAAAACGTTGCAGTTCTTT 60.094 40.909 0.00 0.00 32.43 2.52
2627 5544 2.670905 GCCAAAACGTTGCAGTTCTTTT 59.329 40.909 0.00 0.00 32.43 2.27
2628 5545 3.124466 GCCAAAACGTTGCAGTTCTTTTT 59.876 39.130 0.00 0.00 32.43 1.94
2660 5577 9.449719 AAGGACGTTTTTATTATCTCAGAATGT 57.550 29.630 0.00 0.00 37.40 2.71
2672 5589 5.419760 TCTCAGAATGTAGTATCGAACGG 57.580 43.478 0.00 0.00 37.40 4.44
2673 5590 5.121105 TCTCAGAATGTAGTATCGAACGGA 58.879 41.667 0.00 0.00 37.40 4.69
2674 5591 5.763698 TCTCAGAATGTAGTATCGAACGGAT 59.236 40.000 0.00 0.00 36.88 4.18
2675 5592 6.932960 TCTCAGAATGTAGTATCGAACGGATA 59.067 38.462 0.00 0.00 35.25 2.59
2676 5593 6.895898 TCAGAATGTAGTATCGAACGGATAC 58.104 40.000 5.88 5.88 46.40 2.24
2687 5604 5.651172 TCGAACGGATACAAAGCATTATG 57.349 39.130 0.00 0.00 0.00 1.90
2688 5605 5.353111 TCGAACGGATACAAAGCATTATGA 58.647 37.500 0.00 0.00 0.00 2.15
2689 5606 5.462068 TCGAACGGATACAAAGCATTATGAG 59.538 40.000 0.00 0.00 0.00 2.90
2690 5607 5.234329 CGAACGGATACAAAGCATTATGAGT 59.766 40.000 0.00 0.00 0.00 3.41
2691 5608 6.419710 CGAACGGATACAAAGCATTATGAGTA 59.580 38.462 0.00 0.00 0.00 2.59
2692 5609 7.042992 CGAACGGATACAAAGCATTATGAGTAA 60.043 37.037 0.00 0.00 0.00 2.24
2693 5610 7.478520 ACGGATACAAAGCATTATGAGTAAC 57.521 36.000 0.00 0.00 0.00 2.50
2694 5611 7.045416 ACGGATACAAAGCATTATGAGTAACA 58.955 34.615 0.00 0.00 0.00 2.41
2695 5612 7.011109 ACGGATACAAAGCATTATGAGTAACAC 59.989 37.037 0.00 0.00 0.00 3.32
2696 5613 7.518370 CGGATACAAAGCATTATGAGTAACACC 60.518 40.741 0.00 0.00 0.00 4.16
2697 5614 7.282224 GGATACAAAGCATTATGAGTAACACCA 59.718 37.037 0.00 0.00 0.00 4.17
2698 5615 6.500684 ACAAAGCATTATGAGTAACACCAG 57.499 37.500 0.00 0.00 0.00 4.00
2699 5616 5.415701 ACAAAGCATTATGAGTAACACCAGG 59.584 40.000 0.00 0.00 0.00 4.45
2700 5617 3.545703 AGCATTATGAGTAACACCAGGC 58.454 45.455 0.00 0.00 0.00 4.85
2701 5618 2.618709 GCATTATGAGTAACACCAGGCC 59.381 50.000 0.00 0.00 0.00 5.19
2702 5619 3.685550 GCATTATGAGTAACACCAGGCCT 60.686 47.826 0.00 0.00 0.00 5.19
2703 5620 3.906720 TTATGAGTAACACCAGGCCTC 57.093 47.619 0.00 0.00 0.00 4.70
2704 5621 1.958288 ATGAGTAACACCAGGCCTCT 58.042 50.000 0.00 0.00 0.00 3.69
2705 5622 0.976641 TGAGTAACACCAGGCCTCTG 59.023 55.000 0.00 3.35 40.59 3.35
2706 5623 0.391793 GAGTAACACCAGGCCTCTGC 60.392 60.000 0.00 0.00 39.61 4.26
2707 5624 1.127567 AGTAACACCAGGCCTCTGCA 61.128 55.000 0.00 0.00 39.61 4.41
2708 5625 0.035056 GTAACACCAGGCCTCTGCAT 60.035 55.000 0.00 0.00 39.61 3.96
2709 5626 1.209504 GTAACACCAGGCCTCTGCATA 59.790 52.381 0.00 0.00 39.61 3.14
2710 5627 0.698238 AACACCAGGCCTCTGCATAA 59.302 50.000 0.00 0.00 39.61 1.90
2711 5628 0.035056 ACACCAGGCCTCTGCATAAC 60.035 55.000 0.00 0.00 39.61 1.89
2712 5629 0.254178 CACCAGGCCTCTGCATAACT 59.746 55.000 0.00 0.00 39.61 2.24
2713 5630 1.486310 CACCAGGCCTCTGCATAACTA 59.514 52.381 0.00 0.00 39.61 2.24
2714 5631 2.092968 CACCAGGCCTCTGCATAACTAA 60.093 50.000 0.00 0.00 39.61 2.24
2715 5632 2.576191 ACCAGGCCTCTGCATAACTAAA 59.424 45.455 0.00 0.00 39.61 1.85
2716 5633 3.209410 CCAGGCCTCTGCATAACTAAAG 58.791 50.000 0.00 0.00 39.61 1.85
2717 5634 3.118261 CCAGGCCTCTGCATAACTAAAGA 60.118 47.826 0.00 0.00 39.61 2.52
2718 5635 4.445448 CCAGGCCTCTGCATAACTAAAGAT 60.445 45.833 0.00 0.00 39.61 2.40
2719 5636 4.514441 CAGGCCTCTGCATAACTAAAGATG 59.486 45.833 0.00 0.00 40.13 2.90
2727 5644 4.346129 GCATAACTAAAGATGCACACAGC 58.654 43.478 0.00 0.00 46.29 4.40
2728 5645 4.731773 GCATAACTAAAGATGCACACAGCC 60.732 45.833 0.00 0.00 46.29 4.85
2729 5646 2.566833 ACTAAAGATGCACACAGCCA 57.433 45.000 0.00 0.00 44.83 4.75
2730 5647 2.862541 ACTAAAGATGCACACAGCCAA 58.137 42.857 0.00 0.00 44.83 4.52
2731 5648 3.221771 ACTAAAGATGCACACAGCCAAA 58.778 40.909 0.00 0.00 44.83 3.28
2732 5649 3.828451 ACTAAAGATGCACACAGCCAAAT 59.172 39.130 0.00 0.00 44.83 2.32
2733 5650 3.308438 AAAGATGCACACAGCCAAATC 57.692 42.857 0.00 0.00 44.83 2.17
2734 5651 1.180029 AGATGCACACAGCCAAATCC 58.820 50.000 0.00 0.00 44.83 3.01
2735 5652 0.889994 GATGCACACAGCCAAATCCA 59.110 50.000 0.00 0.00 44.83 3.41
2736 5653 1.273048 GATGCACACAGCCAAATCCAA 59.727 47.619 0.00 0.00 44.83 3.53
2737 5654 1.117994 TGCACACAGCCAAATCCAAA 58.882 45.000 0.00 0.00 44.83 3.28
2738 5655 1.483827 TGCACACAGCCAAATCCAAAA 59.516 42.857 0.00 0.00 44.83 2.44
2739 5656 2.137523 GCACACAGCCAAATCCAAAAG 58.862 47.619 0.00 0.00 37.23 2.27
2740 5657 2.483538 GCACACAGCCAAATCCAAAAGT 60.484 45.455 0.00 0.00 37.23 2.66
2741 5658 3.795877 CACACAGCCAAATCCAAAAGTT 58.204 40.909 0.00 0.00 0.00 2.66
2742 5659 4.190772 CACACAGCCAAATCCAAAAGTTT 58.809 39.130 0.00 0.00 0.00 2.66
2743 5660 4.034279 CACACAGCCAAATCCAAAAGTTTG 59.966 41.667 0.00 0.00 37.90 2.93
2744 5661 4.081198 ACACAGCCAAATCCAAAAGTTTGA 60.081 37.500 5.34 0.00 40.55 2.69
2745 5662 4.270808 CACAGCCAAATCCAAAAGTTTGAC 59.729 41.667 5.34 0.00 40.55 3.18
2746 5663 4.081198 ACAGCCAAATCCAAAAGTTTGACA 60.081 37.500 5.34 0.00 40.55 3.58
2747 5664 4.874966 CAGCCAAATCCAAAAGTTTGACAA 59.125 37.500 5.34 0.00 40.55 3.18
2748 5665 5.353678 CAGCCAAATCCAAAAGTTTGACAAA 59.646 36.000 5.34 0.00 40.55 2.83
2749 5666 5.942826 AGCCAAATCCAAAAGTTTGACAAAA 59.057 32.000 1.27 0.00 40.55 2.44
2750 5667 6.432472 AGCCAAATCCAAAAGTTTGACAAAAA 59.568 30.769 1.27 0.00 40.55 1.94
2785 5702 3.349488 CGACATATCGGCAACAGTAGA 57.651 47.619 0.00 0.00 44.99 2.59
2786 5703 3.300857 CGACATATCGGCAACAGTAGAG 58.699 50.000 0.00 0.00 44.99 2.43
2787 5704 3.243101 CGACATATCGGCAACAGTAGAGT 60.243 47.826 0.00 0.00 44.99 3.24
2788 5705 4.291783 GACATATCGGCAACAGTAGAGTC 58.708 47.826 0.00 0.00 0.00 3.36
2789 5706 3.068307 ACATATCGGCAACAGTAGAGTCC 59.932 47.826 0.00 0.00 0.00 3.85
2790 5707 1.853963 ATCGGCAACAGTAGAGTCCT 58.146 50.000 0.00 0.00 0.00 3.85
2791 5708 2.502142 TCGGCAACAGTAGAGTCCTA 57.498 50.000 0.00 0.00 0.00 2.94
2792 5709 3.014304 TCGGCAACAGTAGAGTCCTAT 57.986 47.619 0.00 0.00 0.00 2.57
2793 5710 4.160642 TCGGCAACAGTAGAGTCCTATA 57.839 45.455 0.00 0.00 0.00 1.31
2794 5711 4.135306 TCGGCAACAGTAGAGTCCTATAG 58.865 47.826 0.00 0.00 0.00 1.31
2795 5712 3.253677 CGGCAACAGTAGAGTCCTATAGG 59.746 52.174 13.07 13.07 0.00 2.57
2796 5713 3.006003 GGCAACAGTAGAGTCCTATAGGC 59.994 52.174 14.50 9.31 34.44 3.93
2797 5714 3.892588 GCAACAGTAGAGTCCTATAGGCT 59.107 47.826 14.50 13.95 34.44 4.58
2798 5715 4.261825 GCAACAGTAGAGTCCTATAGGCTG 60.262 50.000 14.50 15.49 34.44 4.85
2799 5716 5.133941 CAACAGTAGAGTCCTATAGGCTGA 58.866 45.833 21.72 2.25 34.44 4.26
2800 5717 4.721132 ACAGTAGAGTCCTATAGGCTGAC 58.279 47.826 21.72 13.01 34.44 3.51
2801 5718 4.166337 ACAGTAGAGTCCTATAGGCTGACA 59.834 45.833 21.72 1.58 34.44 3.58
2802 5719 4.517453 CAGTAGAGTCCTATAGGCTGACAC 59.483 50.000 14.50 6.68 34.44 3.67
2803 5720 3.963476 AGAGTCCTATAGGCTGACACT 57.037 47.619 14.50 11.58 34.44 3.55
2804 5721 5.607592 AGTAGAGTCCTATAGGCTGACACTA 59.392 44.000 14.50 11.97 33.14 2.74
2805 5722 5.592587 AGAGTCCTATAGGCTGACACTAT 57.407 43.478 14.50 6.41 35.46 2.12
2806 5723 5.321102 AGAGTCCTATAGGCTGACACTATG 58.679 45.833 14.50 0.00 33.46 2.23
2807 5724 3.829601 AGTCCTATAGGCTGACACTATGC 59.170 47.826 14.50 0.00 33.46 3.14
2808 5725 3.056465 GTCCTATAGGCTGACACTATGCC 60.056 52.174 14.50 0.00 46.42 4.40
2813 5730 2.918712 GGCTGACACTATGCCTATGT 57.081 50.000 0.00 0.00 43.05 2.29
2814 5731 2.760374 GGCTGACACTATGCCTATGTC 58.240 52.381 0.00 0.00 43.05 3.06
2815 5732 2.398498 GCTGACACTATGCCTATGTCG 58.602 52.381 0.00 0.00 44.67 4.35
2816 5733 2.034685 GCTGACACTATGCCTATGTCGA 59.965 50.000 0.00 0.00 44.67 4.20
2817 5734 3.490933 GCTGACACTATGCCTATGTCGAA 60.491 47.826 0.00 0.00 44.67 3.71
2818 5735 4.294232 CTGACACTATGCCTATGTCGAAG 58.706 47.826 0.00 0.00 44.67 3.79
2819 5736 3.068165 TGACACTATGCCTATGTCGAAGG 59.932 47.826 0.00 0.00 44.67 3.46
2820 5737 3.031736 ACACTATGCCTATGTCGAAGGT 58.968 45.455 3.65 0.00 36.43 3.50
2821 5738 3.181475 ACACTATGCCTATGTCGAAGGTG 60.181 47.826 3.65 0.00 36.43 4.00
2822 5739 2.365617 ACTATGCCTATGTCGAAGGTGG 59.634 50.000 3.65 0.00 36.43 4.61
2823 5740 1.204146 ATGCCTATGTCGAAGGTGGT 58.796 50.000 3.65 0.00 36.43 4.16
2824 5741 0.249120 TGCCTATGTCGAAGGTGGTG 59.751 55.000 3.65 0.00 36.43 4.17
2825 5742 0.462047 GCCTATGTCGAAGGTGGTGG 60.462 60.000 3.65 0.00 36.43 4.61
2826 5743 0.902531 CCTATGTCGAAGGTGGTGGT 59.097 55.000 0.00 0.00 0.00 4.16
2827 5744 1.405526 CCTATGTCGAAGGTGGTGGTG 60.406 57.143 0.00 0.00 0.00 4.17
2828 5745 0.611200 TATGTCGAAGGTGGTGGTGG 59.389 55.000 0.00 0.00 0.00 4.61
2829 5746 1.125093 ATGTCGAAGGTGGTGGTGGA 61.125 55.000 0.00 0.00 0.00 4.02
2830 5747 1.125093 TGTCGAAGGTGGTGGTGGAT 61.125 55.000 0.00 0.00 0.00 3.41
2831 5748 0.391263 GTCGAAGGTGGTGGTGGATC 60.391 60.000 0.00 0.00 0.00 3.36
2832 5749 1.447838 CGAAGGTGGTGGTGGATCG 60.448 63.158 0.00 0.00 0.00 3.69
2833 5750 1.884075 CGAAGGTGGTGGTGGATCGA 61.884 60.000 0.00 0.00 0.00 3.59
2834 5751 0.541863 GAAGGTGGTGGTGGATCGAT 59.458 55.000 0.00 0.00 0.00 3.59
2835 5752 0.541863 AAGGTGGTGGTGGATCGATC 59.458 55.000 17.36 17.36 0.00 3.69
2853 5770 3.813596 CGGAGGTTATGCTGCCAC 58.186 61.111 0.00 0.00 0.00 5.01
2854 5771 1.819632 CGGAGGTTATGCTGCCACC 60.820 63.158 0.00 0.57 33.06 4.61
2855 5772 1.453928 GGAGGTTATGCTGCCACCC 60.454 63.158 8.64 0.00 30.64 4.61
2856 5773 1.302949 GAGGTTATGCTGCCACCCA 59.697 57.895 8.64 0.00 0.00 4.51
2857 5774 0.106519 GAGGTTATGCTGCCACCCAT 60.107 55.000 8.64 0.00 0.00 4.00
2858 5775 0.396139 AGGTTATGCTGCCACCCATG 60.396 55.000 8.64 0.00 0.00 3.66
2859 5776 0.684153 GGTTATGCTGCCACCCATGT 60.684 55.000 0.00 0.00 0.00 3.21
2860 5777 1.185315 GTTATGCTGCCACCCATGTT 58.815 50.000 0.00 0.00 0.00 2.71
2861 5778 1.135024 GTTATGCTGCCACCCATGTTG 60.135 52.381 0.00 0.00 0.00 3.33
2862 5779 0.683828 TATGCTGCCACCCATGTTGG 60.684 55.000 6.28 6.28 37.25 3.77
2883 5800 3.334413 AAAAACCTCCGTAGCCACC 57.666 52.632 0.00 0.00 0.00 4.61
2884 5801 0.769247 AAAAACCTCCGTAGCCACCT 59.231 50.000 0.00 0.00 0.00 4.00
2885 5802 0.036306 AAAACCTCCGTAGCCACCTG 59.964 55.000 0.00 0.00 0.00 4.00
2886 5803 2.465055 AAACCTCCGTAGCCACCTGC 62.465 60.000 0.00 0.00 41.71 4.85
2887 5804 3.390521 CCTCCGTAGCCACCTGCA 61.391 66.667 0.00 0.00 44.83 4.41
2888 5805 2.125512 CTCCGTAGCCACCTGCAC 60.126 66.667 0.00 0.00 44.83 4.57
2889 5806 2.920384 TCCGTAGCCACCTGCACA 60.920 61.111 0.00 0.00 44.83 4.57
2890 5807 2.244117 CTCCGTAGCCACCTGCACAT 62.244 60.000 0.00 0.00 44.83 3.21
2896 5813 0.607489 AGCCACCTGCACATCAGTTC 60.607 55.000 0.00 0.00 44.83 3.01
2898 5815 1.339055 GCCACCTGCACATCAGTTCTA 60.339 52.381 0.00 0.00 41.25 2.10
2909 5826 8.565896 TGCACATCAGTTCTAGAACAATTAAT 57.434 30.769 31.80 16.73 43.47 1.40
2924 5841 8.418662 AGAACAATTAATATGCATGTGCTCATT 58.581 29.630 10.16 2.25 42.66 2.57
2933 5850 5.710513 TGCATGTGCTCATTTTTAAGAGT 57.289 34.783 6.55 0.00 42.66 3.24
2934 5851 5.702865 TGCATGTGCTCATTTTTAAGAGTC 58.297 37.500 6.55 0.00 42.66 3.36
2936 5853 6.016024 TGCATGTGCTCATTTTTAAGAGTCTT 60.016 34.615 10.87 10.87 42.66 3.01
2937 5854 6.525976 GCATGTGCTCATTTTTAAGAGTCTTC 59.474 38.462 9.12 0.00 38.21 2.87
2938 5855 7.574592 GCATGTGCTCATTTTTAAGAGTCTTCT 60.575 37.037 9.12 0.00 38.21 2.85
2940 5857 6.992123 TGTGCTCATTTTTAAGAGTCTTCTCA 59.008 34.615 9.12 0.00 42.66 3.27
2943 5860 7.386299 TGCTCATTTTTAAGAGTCTTCTCACTC 59.614 37.037 9.12 0.00 42.91 3.51
3014 5958 8.733857 GCTGCAGAAGCGAATTTATTTAATAT 57.266 30.769 20.43 0.00 43.45 1.28
3015 5959 9.825972 GCTGCAGAAGCGAATTTATTTAATATA 57.174 29.630 20.43 0.00 43.45 0.86
3056 6000 7.164230 TCATGCCATTTTATTTCGTAAGGTT 57.836 32.000 0.00 0.00 38.47 3.50
3060 6004 8.057536 TGCCATTTTATTTCGTAAGGTTATGT 57.942 30.769 0.00 0.00 38.47 2.29
3136 6111 1.429463 CGACAACAGTCCAAGCTACC 58.571 55.000 0.00 0.00 0.00 3.18
3229 6204 0.250338 AGGACTTTGACAAGGCGGAC 60.250 55.000 0.00 0.00 39.27 4.79
3314 6292 2.974148 CCTGCGCTGAGTGCACAA 60.974 61.111 17.77 5.79 44.36 3.33
3340 6318 2.009042 GCTCTGATCGTTGGGGTTCAG 61.009 57.143 0.00 0.00 37.52 3.02
3355 6333 4.505742 GGGGTTCAGTCTTTCTTCAGACAT 60.506 45.833 3.78 0.00 45.08 3.06
3381 6359 5.606348 TTTTCTTTGGTTGCCATACACTT 57.394 34.783 0.00 0.00 31.53 3.16
3382 6360 4.846779 TTCTTTGGTTGCCATACACTTC 57.153 40.909 0.00 0.00 31.53 3.01
3383 6361 2.811431 TCTTTGGTTGCCATACACTTCG 59.189 45.455 0.00 0.00 31.53 3.79
3384 6362 0.878416 TTGGTTGCCATACACTTCGC 59.122 50.000 0.00 0.00 31.53 4.70
3387 6365 0.727398 GTTGCCATACACTTCGCTCC 59.273 55.000 0.00 0.00 0.00 4.70
3388 6366 0.613260 TTGCCATACACTTCGCTCCT 59.387 50.000 0.00 0.00 0.00 3.69
3389 6367 1.480789 TGCCATACACTTCGCTCCTA 58.519 50.000 0.00 0.00 0.00 2.94
3390 6368 1.409064 TGCCATACACTTCGCTCCTAG 59.591 52.381 0.00 0.00 0.00 3.02
3393 6371 3.243907 GCCATACACTTCGCTCCTAGAAT 60.244 47.826 0.00 0.00 0.00 2.40
3442 6420 2.029290 GGCATGACTACGTACCCTATGG 60.029 54.545 0.00 0.00 37.80 2.74
3474 6452 2.677542 ATGCTGCATCTTCCCATCAT 57.322 45.000 9.81 0.00 0.00 2.45
3475 6453 1.977056 TGCTGCATCTTCCCATCATC 58.023 50.000 0.00 0.00 0.00 2.92
3476 6454 1.213430 TGCTGCATCTTCCCATCATCA 59.787 47.619 0.00 0.00 0.00 3.07
3477 6455 2.304092 GCTGCATCTTCCCATCATCAA 58.696 47.619 0.00 0.00 0.00 2.57
3478 6456 2.691526 GCTGCATCTTCCCATCATCAAA 59.308 45.455 0.00 0.00 0.00 2.69
3568 6553 1.207089 TGGCCCGTTCTATCTGAAGTG 59.793 52.381 0.00 0.00 35.01 3.16
3656 6641 2.420058 ATACGCTTCCCCAGAAAAGG 57.580 50.000 0.00 0.00 0.00 3.11
3682 6667 4.410400 CCAACCTGGGCCGGTCTC 62.410 72.222 18.16 0.00 35.89 3.36
3706 8213 5.395768 CGTAGAGACCCTCCATCTTCAAAAT 60.396 44.000 0.00 0.00 0.00 1.82
3732 8239 0.459078 CCCATGCAAACACACACACA 59.541 50.000 0.00 0.00 0.00 3.72
3733 8240 1.558741 CCATGCAAACACACACACAC 58.441 50.000 0.00 0.00 0.00 3.82
3734 8241 1.135170 CCATGCAAACACACACACACA 60.135 47.619 0.00 0.00 0.00 3.72
3735 8242 1.919263 CATGCAAACACACACACACAC 59.081 47.619 0.00 0.00 0.00 3.82
3736 8243 0.110010 TGCAAACACACACACACACG 60.110 50.000 0.00 0.00 0.00 4.49
3737 8244 0.167033 GCAAACACACACACACACGA 59.833 50.000 0.00 0.00 0.00 4.35
3738 8245 1.877101 CAAACACACACACACACGAC 58.123 50.000 0.00 0.00 0.00 4.34
3748 8255 1.959226 ACACACGACCGACCATTGC 60.959 57.895 0.00 0.00 0.00 3.56
3770 8277 5.509771 GCATGATGCGAATACACATAAACA 58.490 37.500 0.00 0.00 31.71 2.83
3771 8278 5.970612 GCATGATGCGAATACACATAAACAA 59.029 36.000 0.00 0.00 31.71 2.83
3848 8359 5.179929 CACAAGATCATTGAGTAGTTGCACA 59.820 40.000 10.61 0.00 0.00 4.57
3866 8377 3.242969 GCACATGCATCTGTGTATCTTGG 60.243 47.826 18.96 0.00 46.59 3.61
3988 8510 2.021639 TCCTTTCTCCCTCATCCTCCAT 60.022 50.000 0.00 0.00 0.00 3.41
4025 8547 4.748892 AGATTACAGAACAGGTCATCACG 58.251 43.478 0.00 0.00 0.00 4.35
4040 8566 2.030412 ACGTGCCGCAATGTCTCA 59.970 55.556 0.00 0.00 0.00 3.27
4082 8609 1.810151 CCACGAACAATACCCCAACAG 59.190 52.381 0.00 0.00 0.00 3.16
4193 8724 4.756135 TGGGTATAGTTTTCACAAACGTCC 59.244 41.667 0.00 0.00 46.14 4.79
4195 8726 4.756135 GGTATAGTTTTCACAAACGTCCCA 59.244 41.667 0.00 0.00 46.14 4.37
4248 8784 2.224523 ACCCCCATGTTATAGTCATGCG 60.225 50.000 11.88 6.24 40.63 4.73
4342 8880 5.734220 GCACATTGATGTTGTTGTGAGAACT 60.734 40.000 6.12 0.00 41.50 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.037901 TGTTTGGTACACACGGGACTA 58.962 47.619 0.00 0.00 42.75 2.59
9 10 1.331447 GTTGTTTGGTACACACGGGAC 59.669 52.381 0.00 0.00 42.75 4.46
59 60 1.135139 GCAAGACGAGATGAGCTACCA 59.865 52.381 0.00 0.00 0.00 3.25
100 101 2.445525 ACCACAAAATACACCTGGGTCT 59.554 45.455 0.00 0.00 0.00 3.85
115 116 8.736244 GTCCATATTAGCTTTCTAAAACCACAA 58.264 33.333 0.00 0.00 38.21 3.33
164 180 2.930040 ACACATAGAAAAGATCACGCGG 59.070 45.455 12.47 0.00 0.00 6.46
279 295 6.199908 TGAAAAATGTTTGCGTGTATTTCAGG 59.800 34.615 0.00 0.00 32.42 3.86
337 353 6.926826 ACTCAACGTGTATGTGAAAACTGATA 59.073 34.615 0.00 0.00 0.00 2.15
356 372 8.062065 TCAACCCATAATTGGAAATACTCAAC 57.938 34.615 0.00 0.00 46.92 3.18
608 3401 7.312154 TCCCAAATTTCAAACATATGTTCTCG 58.688 34.615 21.02 12.71 37.25 4.04
782 3575 8.801715 ATATCAAAATATTTCATCACGCAACC 57.198 30.769 0.10 0.00 0.00 3.77
948 3743 2.807045 CTTGAGCGCGCGTCTTCT 60.807 61.111 32.35 19.85 0.00 2.85
949 3744 3.843240 CCTTGAGCGCGCGTCTTC 61.843 66.667 32.35 24.67 0.00 2.87
992 3799 2.299294 GACCTCGCTCGACTCGTCTG 62.299 65.000 0.00 0.00 0.00 3.51
993 3800 2.047083 ACCTCGCTCGACTCGTCT 60.047 61.111 0.00 0.00 0.00 4.18
1009 3816 4.158394 TGAAGCTTATCATTTTGCTGGGAC 59.842 41.667 0.00 0.00 35.79 4.46
1017 3824 7.388460 CTTCACTCCTGAAGCTTATCATTTT 57.612 36.000 0.00 0.00 45.43 1.82
1039 3847 5.129485 TCCTCTTATCCTCGAATGCTTTCTT 59.871 40.000 10.29 0.00 0.00 2.52
1040 3848 4.651503 TCCTCTTATCCTCGAATGCTTTCT 59.348 41.667 10.29 0.00 0.00 2.52
1041 3849 4.950050 TCCTCTTATCCTCGAATGCTTTC 58.050 43.478 2.28 2.28 0.00 2.62
1042 3850 4.202305 CCTCCTCTTATCCTCGAATGCTTT 60.202 45.833 0.00 0.00 0.00 3.51
1112 3920 3.391382 CGGAGGAGGTGGGTGGAC 61.391 72.222 0.00 0.00 0.00 4.02
1199 4013 4.399395 CTCCTGCTCCTTGGCGCA 62.399 66.667 10.83 4.20 34.52 6.09
1310 4124 1.527370 GCCCTCGGCCTTGAAGTAT 59.473 57.895 0.00 0.00 44.06 2.12
1322 4136 3.083349 TCCTCCATGGTGCCCTCG 61.083 66.667 12.58 0.00 37.07 4.63
1377 4191 7.117236 GCAACAAATCAATCAATCAGTGAATGT 59.883 33.333 8.04 0.00 40.50 2.71
1378 4192 7.330946 AGCAACAAATCAATCAATCAGTGAATG 59.669 33.333 1.44 1.44 40.50 2.67
1379 4193 7.330946 CAGCAACAAATCAATCAATCAGTGAAT 59.669 33.333 0.00 0.00 40.50 2.57
1382 4196 6.153756 TCAGCAACAAATCAATCAATCAGTG 58.846 36.000 0.00 0.00 0.00 3.66
1383 4197 6.335471 TCAGCAACAAATCAATCAATCAGT 57.665 33.333 0.00 0.00 0.00 3.41
1384 4198 7.201522 CCAATCAGCAACAAATCAATCAATCAG 60.202 37.037 0.00 0.00 0.00 2.90
1385 4199 6.592220 CCAATCAGCAACAAATCAATCAATCA 59.408 34.615 0.00 0.00 0.00 2.57
1386 4200 6.036735 CCCAATCAGCAACAAATCAATCAATC 59.963 38.462 0.00 0.00 0.00 2.67
1387 4201 5.878116 CCCAATCAGCAACAAATCAATCAAT 59.122 36.000 0.00 0.00 0.00 2.57
1388 4202 5.011840 TCCCAATCAGCAACAAATCAATCAA 59.988 36.000 0.00 0.00 0.00 2.57
1399 4213 0.734889 CGTCCATCCCAATCAGCAAC 59.265 55.000 0.00 0.00 0.00 4.17
1454 4268 0.376852 ACACACACGCACATGTTCAC 59.623 50.000 0.00 0.00 0.00 3.18
1487 4301 2.523168 TCCAGGTCAGTGACGCCA 60.523 61.111 16.89 0.00 32.65 5.69
1511 4325 2.693591 ACTTCCGATGCCTTCTTCGATA 59.306 45.455 0.00 0.00 40.88 2.92
1562 4379 3.181506 GGAGCAGTGGACGATGAAAAATC 60.182 47.826 0.00 0.00 0.00 2.17
1610 4428 2.132740 TCCACGCAAAAGAAATGCAC 57.867 45.000 0.00 0.00 44.01 4.57
1635 4462 7.880105 TGAGCATATGACTGTAGACAGATAAG 58.120 38.462 16.44 3.58 46.59 1.73
1636 4463 7.823745 TGAGCATATGACTGTAGACAGATAA 57.176 36.000 16.44 1.97 46.59 1.75
1638 4465 6.721704 TTGAGCATATGACTGTAGACAGAT 57.278 37.500 16.44 3.20 46.59 2.90
1643 4470 5.675684 TGGTTTGAGCATATGACTGTAGA 57.324 39.130 6.97 0.00 0.00 2.59
1644 4471 6.932356 AATGGTTTGAGCATATGACTGTAG 57.068 37.500 6.97 0.00 34.88 2.74
1645 4472 7.661437 GGATAATGGTTTGAGCATATGACTGTA 59.339 37.037 6.97 0.00 34.88 2.74
1646 4473 6.488006 GGATAATGGTTTGAGCATATGACTGT 59.512 38.462 6.97 0.00 34.88 3.55
1688 4515 2.616634 AGATTGATCACATGAGCGCT 57.383 45.000 11.27 11.27 32.18 5.92
1689 4516 5.178996 AGAAATAGATTGATCACATGAGCGC 59.821 40.000 0.00 0.00 32.18 5.92
1692 4519 7.095144 GGCTGAGAAATAGATTGATCACATGAG 60.095 40.741 0.00 0.00 0.00 2.90
1693 4520 6.709397 GGCTGAGAAATAGATTGATCACATGA 59.291 38.462 0.00 0.00 0.00 3.07
1704 4531 6.058183 GGTACAATGTGGCTGAGAAATAGAT 58.942 40.000 0.00 0.00 0.00 1.98
1724 4551 4.082190 TGCAGAGTACACTTCTCATGGTAC 60.082 45.833 0.00 0.00 37.08 3.34
1727 4554 3.599730 TGCAGAGTACACTTCTCATGG 57.400 47.619 0.00 0.00 34.73 3.66
1728 4555 3.370366 GCTTGCAGAGTACACTTCTCATG 59.630 47.826 0.00 0.00 34.73 3.07
1729 4556 3.007290 TGCTTGCAGAGTACACTTCTCAT 59.993 43.478 0.00 0.00 34.73 2.90
1769 4606 3.131933 ACGATAATGCTCTCTCTGCTTGT 59.868 43.478 0.00 0.00 0.00 3.16
1781 4618 8.624367 ACTACTTACTATCTGACGATAATGCT 57.376 34.615 0.00 0.00 32.00 3.79
1784 4621 9.142515 CGAGACTACTTACTATCTGACGATAAT 57.857 37.037 0.00 0.00 32.00 1.28
1801 4638 5.556006 AAGAGCCTACTATCGAGACTACT 57.444 43.478 0.00 0.00 0.00 2.57
1802 4639 7.910441 ATTAAGAGCCTACTATCGAGACTAC 57.090 40.000 0.00 0.00 0.00 2.73
1803 4640 8.377034 AGAATTAAGAGCCTACTATCGAGACTA 58.623 37.037 0.00 0.00 0.00 2.59
1804 4641 7.228590 AGAATTAAGAGCCTACTATCGAGACT 58.771 38.462 0.00 0.00 0.00 3.24
1805 4642 7.443259 AGAATTAAGAGCCTACTATCGAGAC 57.557 40.000 0.00 0.00 0.00 3.36
1806 4643 7.825270 CCTAGAATTAAGAGCCTACTATCGAGA 59.175 40.741 0.00 0.00 0.00 4.04
1807 4644 7.414762 GCCTAGAATTAAGAGCCTACTATCGAG 60.415 44.444 0.00 0.00 0.00 4.04
1808 4645 6.374894 GCCTAGAATTAAGAGCCTACTATCGA 59.625 42.308 0.00 0.00 0.00 3.59
1809 4646 6.404954 GGCCTAGAATTAAGAGCCTACTATCG 60.405 46.154 0.00 0.00 37.42 2.92
1810 4647 6.127281 GGGCCTAGAATTAAGAGCCTACTATC 60.127 46.154 0.84 0.00 40.32 2.08
1811 4648 5.722441 GGGCCTAGAATTAAGAGCCTACTAT 59.278 44.000 0.84 0.00 40.32 2.12
1812 4649 5.085219 GGGCCTAGAATTAAGAGCCTACTA 58.915 45.833 0.84 0.00 40.32 1.82
1813 4650 3.904965 GGGCCTAGAATTAAGAGCCTACT 59.095 47.826 0.84 0.00 40.32 2.57
1814 4651 3.646637 TGGGCCTAGAATTAAGAGCCTAC 59.353 47.826 4.53 5.34 40.32 3.18
1815 4652 3.936461 TGGGCCTAGAATTAAGAGCCTA 58.064 45.455 4.53 9.14 40.32 3.93
1816 4653 2.776665 TGGGCCTAGAATTAAGAGCCT 58.223 47.619 4.53 0.00 40.32 4.58
1818 4655 3.312697 CGTTTGGGCCTAGAATTAAGAGC 59.687 47.826 4.53 0.00 0.00 4.09
1825 4662 4.600062 AGAAAATCGTTTGGGCCTAGAAT 58.400 39.130 4.53 0.00 0.00 2.40
1828 4665 4.380550 GGAAAGAAAATCGTTTGGGCCTAG 60.381 45.833 4.53 0.00 0.00 3.02
1832 4669 3.660501 AGGAAAGAAAATCGTTTGGGC 57.339 42.857 0.00 0.00 0.00 5.36
1836 4673 7.284716 AGGAGTTTGTAGGAAAGAAAATCGTTT 59.715 33.333 0.00 0.00 36.58 3.60
1840 4677 7.228706 TGACAGGAGTTTGTAGGAAAGAAAATC 59.771 37.037 0.00 0.00 35.39 2.17
1842 4679 6.419791 TGACAGGAGTTTGTAGGAAAGAAAA 58.580 36.000 0.00 0.00 0.00 2.29
1843 4680 5.996644 TGACAGGAGTTTGTAGGAAAGAAA 58.003 37.500 0.00 0.00 0.00 2.52
1844 4681 5.623956 TGACAGGAGTTTGTAGGAAAGAA 57.376 39.130 0.00 0.00 0.00 2.52
1845 4682 5.623956 TTGACAGGAGTTTGTAGGAAAGA 57.376 39.130 0.00 0.00 0.00 2.52
1846 4683 6.238759 CCTTTTGACAGGAGTTTGTAGGAAAG 60.239 42.308 0.00 0.00 35.71 2.62
1853 4690 5.337250 GGTTTTCCTTTTGACAGGAGTTTGT 60.337 40.000 0.00 0.00 44.18 2.83
1854 4691 5.109210 GGTTTTCCTTTTGACAGGAGTTTG 58.891 41.667 0.00 0.00 44.18 2.93
1856 4693 3.704566 GGGTTTTCCTTTTGACAGGAGTT 59.295 43.478 0.00 0.00 44.18 3.01
1858 4695 3.068165 GTGGGTTTTCCTTTTGACAGGAG 59.932 47.826 0.00 0.00 44.18 3.69
1890 4727 6.707440 TGAGTGCCAGACAAAAAGAAATTA 57.293 33.333 0.00 0.00 0.00 1.40
1892 4729 5.127682 ACTTGAGTGCCAGACAAAAAGAAAT 59.872 36.000 0.00 0.00 0.00 2.17
1933 4770 7.267857 AGCTAATTGTGTTTTGCTTTCTTCTT 58.732 30.769 0.00 0.00 34.70 2.52
1935 4772 7.647715 TGTAGCTAATTGTGTTTTGCTTTCTTC 59.352 33.333 0.00 0.00 38.38 2.87
1962 4799 1.002544 GGAGTAGCTTGCAGTGACCTT 59.997 52.381 0.00 0.00 0.00 3.50
1965 4804 1.001406 ACAGGAGTAGCTTGCAGTGAC 59.999 52.381 0.00 0.00 0.00 3.67
1968 4807 3.118592 GGATTACAGGAGTAGCTTGCAGT 60.119 47.826 0.00 0.00 0.00 4.40
1977 4816 6.265649 GCAATAGAGACAGGATTACAGGAGTA 59.734 42.308 0.00 0.00 0.00 2.59
1979 4818 5.304101 AGCAATAGAGACAGGATTACAGGAG 59.696 44.000 0.00 0.00 0.00 3.69
1981 4820 5.069648 TCAGCAATAGAGACAGGATTACAGG 59.930 44.000 0.00 0.00 0.00 4.00
1996 4835 6.057533 TCCATGGTTAATCTGTCAGCAATAG 58.942 40.000 12.58 0.00 0.00 1.73
2021 4860 8.313292 GTTGCTCTCATCTCTCCTGATTATATT 58.687 37.037 0.00 0.00 0.00 1.28
2026 4865 3.181477 CGTTGCTCTCATCTCTCCTGATT 60.181 47.826 0.00 0.00 0.00 2.57
2031 4870 0.459489 AGCGTTGCTCTCATCTCTCC 59.541 55.000 0.00 0.00 30.62 3.71
2071 4910 6.090358 GCGACTACAACTCACTTTTATAAGCA 59.910 38.462 0.00 0.00 34.60 3.91
2072 4911 6.090358 TGCGACTACAACTCACTTTTATAAGC 59.910 38.462 0.00 0.00 34.60 3.09
2073 4912 7.576750 TGCGACTACAACTCACTTTTATAAG 57.423 36.000 0.00 0.00 37.40 1.73
2074 4913 7.790000 GTTGCGACTACAACTCACTTTTATAA 58.210 34.615 0.00 0.00 45.20 0.98
2077 4916 5.646467 GTTGCGACTACAACTCACTTTTA 57.354 39.130 0.00 0.00 45.20 1.52
2078 4917 4.531659 GTTGCGACTACAACTCACTTTT 57.468 40.909 0.00 0.00 45.20 2.27
2095 4934 5.226154 GGCGTTTTTGTTTGTAAAATGTTGC 59.774 36.000 0.00 0.00 35.14 4.17
2152 4991 2.912956 AGGATAGAACCACTGCAAGGAA 59.087 45.455 11.56 0.00 39.30 3.36
2203 5050 7.676683 ACCACATAGTGACCTAACTGATATT 57.323 36.000 0.00 0.00 35.23 1.28
2204 5051 8.777578 TTACCACATAGTGACCTAACTGATAT 57.222 34.615 0.00 0.00 35.23 1.63
2213 5060 3.611766 GTGCTTACCACATAGTGACCT 57.388 47.619 0.00 0.00 44.06 3.85
2223 5070 7.750903 GTGAAAAATCAGATAAGTGCTTACCAC 59.249 37.037 0.00 0.00 45.01 4.16
2224 5071 7.665559 AGTGAAAAATCAGATAAGTGCTTACCA 59.334 33.333 0.00 0.00 0.00 3.25
2225 5072 8.045176 AGTGAAAAATCAGATAAGTGCTTACC 57.955 34.615 0.00 0.00 0.00 2.85
2284 5197 7.696992 AGTGGTCTTCAAGTTTCAACTTAAA 57.303 32.000 4.61 0.00 46.89 1.52
2340 5253 4.808414 TGGAGTTTCGATCTTGATCTGT 57.192 40.909 8.70 0.00 0.00 3.41
2346 5259 9.151471 TCTTAACTATTTGGAGTTTCGATCTTG 57.849 33.333 0.00 0.00 40.22 3.02
2365 5278 7.653713 CAGTGTGAACTGTTCTACATCTTAACT 59.346 37.037 20.18 11.67 33.32 2.24
2378 5295 5.647658 TGTCAAGAAATCAGTGTGAACTGTT 59.352 36.000 5.82 0.00 38.75 3.16
2379 5296 5.185454 TGTCAAGAAATCAGTGTGAACTGT 58.815 37.500 5.82 0.00 38.75 3.55
2381 5298 6.757897 TTTGTCAAGAAATCAGTGTGAACT 57.242 33.333 0.00 0.00 0.00 3.01
2385 5302 9.903682 ATAGAAATTTGTCAAGAAATCAGTGTG 57.096 29.630 0.00 0.00 0.00 3.82
2396 5313 9.748708 TCTTGGTGAAAATAGAAATTTGTCAAG 57.251 29.630 0.00 0.00 35.46 3.02
2445 5362 9.454859 AGGAAAATGAAGTTTAGAAGTATGAGG 57.545 33.333 0.00 0.00 0.00 3.86
2463 5380 3.334691 TCCTCGCACTGTAAGGAAAATG 58.665 45.455 3.93 0.00 39.30 2.32
2474 5391 2.350772 GGTGTTTCATTTCCTCGCACTG 60.351 50.000 0.00 0.00 0.00 3.66
2492 5409 7.488322 TCAACAAACTAAGGAAAATGAAGGTG 58.512 34.615 0.00 0.00 0.00 4.00
2495 5412 9.364989 TGTTTCAACAAACTAAGGAAAATGAAG 57.635 29.630 0.00 0.00 42.29 3.02
2496 5413 9.883142 ATGTTTCAACAAACTAAGGAAAATGAA 57.117 25.926 0.00 0.00 43.03 2.57
2497 5414 9.528018 GATGTTTCAACAAACTAAGGAAAATGA 57.472 29.630 0.00 0.00 43.03 2.57
2498 5415 8.764287 GGATGTTTCAACAAACTAAGGAAAATG 58.236 33.333 0.00 0.00 43.03 2.32
2499 5416 8.482128 TGGATGTTTCAACAAACTAAGGAAAAT 58.518 29.630 0.00 0.00 43.03 1.82
2500 5417 7.841956 TGGATGTTTCAACAAACTAAGGAAAA 58.158 30.769 0.00 0.00 43.03 2.29
2501 5418 7.340743 TCTGGATGTTTCAACAAACTAAGGAAA 59.659 33.333 0.00 0.00 43.03 3.13
2502 5419 6.831353 TCTGGATGTTTCAACAAACTAAGGAA 59.169 34.615 0.00 0.00 43.03 3.36
2503 5420 6.361433 TCTGGATGTTTCAACAAACTAAGGA 58.639 36.000 0.00 0.00 43.03 3.36
2505 5422 6.145535 GCTCTGGATGTTTCAACAAACTAAG 58.854 40.000 0.00 0.00 43.03 2.18
2513 5430 2.680339 GCTAGGCTCTGGATGTTTCAAC 59.320 50.000 0.00 0.00 0.00 3.18
2514 5431 2.305635 TGCTAGGCTCTGGATGTTTCAA 59.694 45.455 0.00 0.00 0.00 2.69
2522 5439 3.827008 CAGTTTATGCTAGGCTCTGGA 57.173 47.619 0.00 0.00 0.00 3.86
2582 5499 2.159382 TGCTGGCAGCTAAGTTTAACC 58.841 47.619 36.50 7.19 42.97 2.85
2594 5511 1.733389 CGTTTTGGCTATTGCTGGCAG 60.733 52.381 10.94 10.94 40.95 4.85
2601 5518 3.011949 ACTGCAACGTTTTGGCTATTG 57.988 42.857 0.00 0.00 32.81 1.90
2604 5521 2.294074 AGAACTGCAACGTTTTGGCTA 58.706 42.857 0.00 0.00 32.81 3.93
2606 5523 1.921243 AAGAACTGCAACGTTTTGGC 58.079 45.000 0.00 0.00 32.81 4.52
2634 5551 9.449719 ACATTCTGAGATAATAAAAACGTCCTT 57.550 29.630 0.00 0.00 0.00 3.36
2646 5563 8.237949 CCGTTCGATACTACATTCTGAGATAAT 58.762 37.037 0.00 0.00 0.00 1.28
2647 5564 7.443272 TCCGTTCGATACTACATTCTGAGATAA 59.557 37.037 0.00 0.00 0.00 1.75
2648 5565 6.932960 TCCGTTCGATACTACATTCTGAGATA 59.067 38.462 0.00 0.00 0.00 1.98
2649 5566 5.763698 TCCGTTCGATACTACATTCTGAGAT 59.236 40.000 0.00 0.00 0.00 2.75
2650 5567 5.121105 TCCGTTCGATACTACATTCTGAGA 58.879 41.667 0.00 0.00 0.00 3.27
2651 5568 5.419760 TCCGTTCGATACTACATTCTGAG 57.580 43.478 0.00 0.00 0.00 3.35
2652 5569 6.895898 GTATCCGTTCGATACTACATTCTGA 58.104 40.000 3.22 0.00 46.81 3.27
2663 5580 7.149307 TCATAATGCTTTGTATCCGTTCGATA 58.851 34.615 0.00 0.00 31.92 2.92
2664 5581 5.989168 TCATAATGCTTTGTATCCGTTCGAT 59.011 36.000 0.00 0.00 34.73 3.59
2665 5582 5.353111 TCATAATGCTTTGTATCCGTTCGA 58.647 37.500 0.00 0.00 0.00 3.71
2666 5583 5.234329 ACTCATAATGCTTTGTATCCGTTCG 59.766 40.000 0.00 0.00 0.00 3.95
2667 5584 6.604735 ACTCATAATGCTTTGTATCCGTTC 57.395 37.500 0.00 0.00 0.00 3.95
2668 5585 7.551262 TGTTACTCATAATGCTTTGTATCCGTT 59.449 33.333 0.00 0.00 0.00 4.44
2669 5586 7.011109 GTGTTACTCATAATGCTTTGTATCCGT 59.989 37.037 0.00 0.00 0.00 4.69
2670 5587 7.345192 GTGTTACTCATAATGCTTTGTATCCG 58.655 38.462 0.00 0.00 0.00 4.18
2671 5588 7.282224 TGGTGTTACTCATAATGCTTTGTATCC 59.718 37.037 0.00 0.00 0.00 2.59
2672 5589 8.208718 TGGTGTTACTCATAATGCTTTGTATC 57.791 34.615 0.00 0.00 0.00 2.24
2673 5590 7.283127 CCTGGTGTTACTCATAATGCTTTGTAT 59.717 37.037 0.00 0.00 0.00 2.29
2674 5591 6.597672 CCTGGTGTTACTCATAATGCTTTGTA 59.402 38.462 0.00 0.00 0.00 2.41
2675 5592 5.415701 CCTGGTGTTACTCATAATGCTTTGT 59.584 40.000 0.00 0.00 0.00 2.83
2676 5593 5.677091 GCCTGGTGTTACTCATAATGCTTTG 60.677 44.000 0.00 0.00 0.00 2.77
2677 5594 4.399303 GCCTGGTGTTACTCATAATGCTTT 59.601 41.667 0.00 0.00 0.00 3.51
2678 5595 3.947834 GCCTGGTGTTACTCATAATGCTT 59.052 43.478 0.00 0.00 0.00 3.91
2679 5596 3.545703 GCCTGGTGTTACTCATAATGCT 58.454 45.455 0.00 0.00 0.00 3.79
2680 5597 2.618709 GGCCTGGTGTTACTCATAATGC 59.381 50.000 0.00 0.00 0.00 3.56
2681 5598 4.130118 GAGGCCTGGTGTTACTCATAATG 58.870 47.826 12.00 0.00 0.00 1.90
2682 5599 4.040755 AGAGGCCTGGTGTTACTCATAAT 58.959 43.478 12.00 0.00 0.00 1.28
2683 5600 3.197766 CAGAGGCCTGGTGTTACTCATAA 59.802 47.826 12.00 0.00 36.77 1.90
2684 5601 2.766263 CAGAGGCCTGGTGTTACTCATA 59.234 50.000 12.00 0.00 36.77 2.15
2685 5602 1.556911 CAGAGGCCTGGTGTTACTCAT 59.443 52.381 12.00 0.00 36.77 2.90
2686 5603 0.976641 CAGAGGCCTGGTGTTACTCA 59.023 55.000 12.00 0.00 36.77 3.41
2687 5604 0.391793 GCAGAGGCCTGGTGTTACTC 60.392 60.000 12.00 0.00 40.72 2.59
2688 5605 1.127567 TGCAGAGGCCTGGTGTTACT 61.128 55.000 12.00 0.00 40.72 2.24
2689 5606 0.035056 ATGCAGAGGCCTGGTGTTAC 60.035 55.000 12.00 0.00 40.72 2.50
2690 5607 1.578897 TATGCAGAGGCCTGGTGTTA 58.421 50.000 12.00 1.47 40.72 2.41
2691 5608 0.698238 TTATGCAGAGGCCTGGTGTT 59.302 50.000 12.00 2.29 40.72 3.32
2692 5609 0.035056 GTTATGCAGAGGCCTGGTGT 60.035 55.000 12.00 0.00 40.72 4.16
2693 5610 0.254178 AGTTATGCAGAGGCCTGGTG 59.746 55.000 12.00 8.99 40.72 4.17
2694 5611 1.879575 TAGTTATGCAGAGGCCTGGT 58.120 50.000 12.00 0.00 40.72 4.00
2695 5612 3.118261 TCTTTAGTTATGCAGAGGCCTGG 60.118 47.826 12.00 2.48 40.72 4.45
2696 5613 4.142609 TCTTTAGTTATGCAGAGGCCTG 57.857 45.455 12.00 0.00 43.22 4.85
2697 5614 4.712476 CATCTTTAGTTATGCAGAGGCCT 58.288 43.478 3.86 3.86 40.13 5.19
2698 5615 3.251972 GCATCTTTAGTTATGCAGAGGCC 59.748 47.826 0.00 0.00 46.19 5.19
2699 5616 4.480386 GCATCTTTAGTTATGCAGAGGC 57.520 45.455 0.00 0.00 46.19 4.70
2705 5622 4.346129 GCTGTGTGCATCTTTAGTTATGC 58.654 43.478 0.00 0.00 46.92 3.14
2706 5623 4.395854 TGGCTGTGTGCATCTTTAGTTATG 59.604 41.667 0.00 0.00 45.15 1.90
2707 5624 4.588899 TGGCTGTGTGCATCTTTAGTTAT 58.411 39.130 0.00 0.00 45.15 1.89
2708 5625 4.014569 TGGCTGTGTGCATCTTTAGTTA 57.985 40.909 0.00 0.00 45.15 2.24
2709 5626 2.862541 TGGCTGTGTGCATCTTTAGTT 58.137 42.857 0.00 0.00 45.15 2.24
2710 5627 2.566833 TGGCTGTGTGCATCTTTAGT 57.433 45.000 0.00 0.00 45.15 2.24
2711 5628 3.921119 TTTGGCTGTGTGCATCTTTAG 57.079 42.857 0.00 0.00 45.15 1.85
2712 5629 3.193267 GGATTTGGCTGTGTGCATCTTTA 59.807 43.478 0.00 0.00 45.15 1.85
2713 5630 2.028748 GGATTTGGCTGTGTGCATCTTT 60.029 45.455 0.00 0.00 45.15 2.52
2714 5631 1.547372 GGATTTGGCTGTGTGCATCTT 59.453 47.619 0.00 0.00 45.15 2.40
2715 5632 1.180029 GGATTTGGCTGTGTGCATCT 58.820 50.000 0.00 0.00 45.15 2.90
2716 5633 0.889994 TGGATTTGGCTGTGTGCATC 59.110 50.000 0.00 0.00 45.15 3.91
2717 5634 1.340088 TTGGATTTGGCTGTGTGCAT 58.660 45.000 0.00 0.00 45.15 3.96
2718 5635 1.117994 TTTGGATTTGGCTGTGTGCA 58.882 45.000 0.00 0.00 45.15 4.57
2719 5636 2.137523 CTTTTGGATTTGGCTGTGTGC 58.862 47.619 0.00 0.00 41.94 4.57
2720 5637 3.457610 ACTTTTGGATTTGGCTGTGTG 57.542 42.857 0.00 0.00 0.00 3.82
2721 5638 4.081198 TCAAACTTTTGGATTTGGCTGTGT 60.081 37.500 1.94 0.00 38.66 3.72
2722 5639 4.270808 GTCAAACTTTTGGATTTGGCTGTG 59.729 41.667 1.94 0.00 37.42 3.66
2723 5640 4.081198 TGTCAAACTTTTGGATTTGGCTGT 60.081 37.500 1.94 0.00 40.34 4.40
2724 5641 4.440880 TGTCAAACTTTTGGATTTGGCTG 58.559 39.130 1.94 0.00 40.34 4.85
2725 5642 4.751767 TGTCAAACTTTTGGATTTGGCT 57.248 36.364 1.94 0.00 40.34 4.75
2726 5643 5.809719 TTTGTCAAACTTTTGGATTTGGC 57.190 34.783 1.94 0.00 40.15 4.52
2748 5665 9.284594 CGATATGTCGGTTTTATTTCATGTTTT 57.715 29.630 3.61 0.00 44.00 2.43
2749 5666 8.835467 CGATATGTCGGTTTTATTTCATGTTT 57.165 30.769 3.61 0.00 44.00 2.83
2766 5683 4.291783 GACTCTACTGTTGCCGATATGTC 58.708 47.826 0.00 0.00 0.00 3.06
2767 5684 3.068307 GGACTCTACTGTTGCCGATATGT 59.932 47.826 0.00 0.00 0.00 2.29
2768 5685 3.319405 AGGACTCTACTGTTGCCGATATG 59.681 47.826 0.00 0.00 0.00 1.78
2769 5686 3.567397 AGGACTCTACTGTTGCCGATAT 58.433 45.455 0.00 0.00 0.00 1.63
2770 5687 3.014304 AGGACTCTACTGTTGCCGATA 57.986 47.619 0.00 0.00 0.00 2.92
2771 5688 1.853963 AGGACTCTACTGTTGCCGAT 58.146 50.000 0.00 0.00 0.00 4.18
2772 5689 2.502142 TAGGACTCTACTGTTGCCGA 57.498 50.000 0.00 0.00 0.00 5.54
2773 5690 3.253677 CCTATAGGACTCTACTGTTGCCG 59.746 52.174 14.11 0.00 37.39 5.69
2774 5691 3.006003 GCCTATAGGACTCTACTGTTGCC 59.994 52.174 23.61 0.00 37.39 4.52
2775 5692 3.892588 AGCCTATAGGACTCTACTGTTGC 59.107 47.826 23.61 1.87 37.39 4.17
2776 5693 5.009210 GTCAGCCTATAGGACTCTACTGTTG 59.991 48.000 23.61 5.88 37.39 3.33
2777 5694 5.134661 GTCAGCCTATAGGACTCTACTGTT 58.865 45.833 23.61 0.00 37.39 3.16
2778 5695 4.166337 TGTCAGCCTATAGGACTCTACTGT 59.834 45.833 23.61 0.00 37.39 3.55
2779 5696 4.517453 GTGTCAGCCTATAGGACTCTACTG 59.483 50.000 23.61 17.36 37.39 2.74
2780 5697 4.414182 AGTGTCAGCCTATAGGACTCTACT 59.586 45.833 23.61 15.86 34.65 2.57
2781 5698 4.721132 AGTGTCAGCCTATAGGACTCTAC 58.279 47.826 23.61 16.78 34.65 2.59
2782 5699 6.477253 CATAGTGTCAGCCTATAGGACTCTA 58.523 44.000 23.61 19.41 40.07 2.43
2783 5700 3.963476 AGTGTCAGCCTATAGGACTCT 57.037 47.619 23.61 14.15 37.39 3.24
2784 5701 4.082463 GCATAGTGTCAGCCTATAGGACTC 60.082 50.000 23.61 12.19 37.39 3.36
2785 5702 3.829601 GCATAGTGTCAGCCTATAGGACT 59.170 47.826 23.61 17.50 37.39 3.85
2786 5703 3.056465 GGCATAGTGTCAGCCTATAGGAC 60.056 52.174 23.61 12.23 44.92 3.85
2787 5704 3.165875 GGCATAGTGTCAGCCTATAGGA 58.834 50.000 23.61 0.00 44.92 2.94
2788 5705 3.601443 GGCATAGTGTCAGCCTATAGG 57.399 52.381 15.01 15.01 44.92 2.57
2795 5712 2.034685 TCGACATAGGCATAGTGTCAGC 59.965 50.000 15.91 0.00 41.69 4.26
2796 5713 3.990318 TCGACATAGGCATAGTGTCAG 57.010 47.619 15.91 10.95 41.69 3.51
2797 5714 3.068165 CCTTCGACATAGGCATAGTGTCA 59.932 47.826 15.91 5.86 41.69 3.58
2798 5715 3.068307 ACCTTCGACATAGGCATAGTGTC 59.932 47.826 1.37 9.48 39.02 3.67
2799 5716 3.031736 ACCTTCGACATAGGCATAGTGT 58.968 45.455 1.37 0.00 36.17 3.55
2800 5717 3.384668 CACCTTCGACATAGGCATAGTG 58.615 50.000 1.37 0.00 36.17 2.74
2801 5718 2.365617 CCACCTTCGACATAGGCATAGT 59.634 50.000 1.37 0.00 36.17 2.12
2802 5719 2.365617 ACCACCTTCGACATAGGCATAG 59.634 50.000 1.37 0.00 36.17 2.23
2803 5720 2.102420 CACCACCTTCGACATAGGCATA 59.898 50.000 1.37 0.00 36.17 3.14
2804 5721 1.134401 CACCACCTTCGACATAGGCAT 60.134 52.381 1.37 0.00 36.17 4.40
2805 5722 0.249120 CACCACCTTCGACATAGGCA 59.751 55.000 1.37 0.00 36.17 4.75
2806 5723 0.462047 CCACCACCTTCGACATAGGC 60.462 60.000 1.37 0.00 36.17 3.93
2807 5724 0.902531 ACCACCACCTTCGACATAGG 59.097 55.000 0.00 0.00 38.79 2.57
2808 5725 1.405526 CCACCACCACCTTCGACATAG 60.406 57.143 0.00 0.00 0.00 2.23
2809 5726 0.611200 CCACCACCACCTTCGACATA 59.389 55.000 0.00 0.00 0.00 2.29
2810 5727 1.125093 TCCACCACCACCTTCGACAT 61.125 55.000 0.00 0.00 0.00 3.06
2811 5728 1.125093 ATCCACCACCACCTTCGACA 61.125 55.000 0.00 0.00 0.00 4.35
2812 5729 0.391263 GATCCACCACCACCTTCGAC 60.391 60.000 0.00 0.00 0.00 4.20
2813 5730 1.884075 CGATCCACCACCACCTTCGA 61.884 60.000 0.00 0.00 0.00 3.71
2814 5731 1.447838 CGATCCACCACCACCTTCG 60.448 63.158 0.00 0.00 0.00 3.79
2815 5732 0.541863 ATCGATCCACCACCACCTTC 59.458 55.000 0.00 0.00 0.00 3.46
2816 5733 0.541863 GATCGATCCACCACCACCTT 59.458 55.000 14.76 0.00 0.00 3.50
2817 5734 1.338136 GGATCGATCCACCACCACCT 61.338 60.000 34.65 0.00 46.38 4.00
2818 5735 1.146263 GGATCGATCCACCACCACC 59.854 63.158 34.65 8.82 46.38 4.61
2819 5736 4.857251 GGATCGATCCACCACCAC 57.143 61.111 34.65 8.76 46.38 4.16
2827 5744 1.404315 GCATAACCTCCGGATCGATCC 60.404 57.143 31.04 31.04 43.65 3.36
2828 5745 1.546476 AGCATAACCTCCGGATCGATC 59.454 52.381 17.36 17.36 0.00 3.69
2829 5746 1.273606 CAGCATAACCTCCGGATCGAT 59.726 52.381 3.57 0.00 0.00 3.59
2830 5747 0.673985 CAGCATAACCTCCGGATCGA 59.326 55.000 3.57 0.00 0.00 3.59
2831 5748 0.946221 GCAGCATAACCTCCGGATCG 60.946 60.000 3.57 0.00 0.00 3.69
2832 5749 0.603975 GGCAGCATAACCTCCGGATC 60.604 60.000 3.57 0.00 0.00 3.36
2833 5750 1.344953 TGGCAGCATAACCTCCGGAT 61.345 55.000 3.57 0.00 0.00 4.18
2834 5751 1.992834 TGGCAGCATAACCTCCGGA 60.993 57.895 2.93 2.93 0.00 5.14
2835 5752 1.819632 GTGGCAGCATAACCTCCGG 60.820 63.158 0.00 0.00 0.00 5.14
2836 5753 1.819632 GGTGGCAGCATAACCTCCG 60.820 63.158 12.58 0.00 30.45 4.63
2837 5754 1.453928 GGGTGGCAGCATAACCTCC 60.454 63.158 19.48 0.00 38.61 4.30
2838 5755 0.106519 ATGGGTGGCAGCATAACCTC 60.107 55.000 19.48 0.00 34.24 3.85
2839 5756 0.396139 CATGGGTGGCAGCATAACCT 60.396 55.000 19.48 0.00 34.24 3.50
2840 5757 0.684153 ACATGGGTGGCAGCATAACC 60.684 55.000 19.48 0.00 0.00 2.85
2841 5758 1.135024 CAACATGGGTGGCAGCATAAC 60.135 52.381 19.48 1.11 0.00 1.89
2842 5759 1.184431 CAACATGGGTGGCAGCATAA 58.816 50.000 19.48 3.65 0.00 1.90
2843 5760 0.683828 CCAACATGGGTGGCAGCATA 60.684 55.000 19.48 7.19 32.67 3.14
2844 5761 1.985662 CCAACATGGGTGGCAGCAT 60.986 57.895 19.48 7.36 32.67 3.79
2845 5762 2.601067 CCAACATGGGTGGCAGCA 60.601 61.111 19.48 5.16 32.67 4.41
2865 5782 0.769247 AGGTGGCTACGGAGGTTTTT 59.231 50.000 0.00 0.00 0.00 1.94
2866 5783 0.036306 CAGGTGGCTACGGAGGTTTT 59.964 55.000 0.00 0.00 0.00 2.43
2867 5784 1.677552 CAGGTGGCTACGGAGGTTT 59.322 57.895 0.00 0.00 0.00 3.27
2868 5785 2.955881 GCAGGTGGCTACGGAGGTT 61.956 63.158 0.00 0.00 40.25 3.50
2869 5786 3.391382 GCAGGTGGCTACGGAGGT 61.391 66.667 0.00 0.00 40.25 3.85
2870 5787 3.390521 TGCAGGTGGCTACGGAGG 61.391 66.667 0.00 0.00 45.15 4.30
2871 5788 2.125512 GTGCAGGTGGCTACGGAG 60.126 66.667 0.00 0.00 45.15 4.63
2872 5789 2.238847 GATGTGCAGGTGGCTACGGA 62.239 60.000 0.00 0.00 45.15 4.69
2873 5790 1.815421 GATGTGCAGGTGGCTACGG 60.815 63.158 0.00 0.00 45.15 4.02
2874 5791 1.079197 TGATGTGCAGGTGGCTACG 60.079 57.895 0.00 0.00 45.15 3.51
2875 5792 1.611673 AACTGATGTGCAGGTGGCTAC 60.612 52.381 0.00 0.00 44.70 3.58
2876 5793 0.692476 AACTGATGTGCAGGTGGCTA 59.308 50.000 0.00 0.00 44.70 3.93
2877 5794 0.607489 GAACTGATGTGCAGGTGGCT 60.607 55.000 0.00 0.00 46.92 4.75
2878 5795 0.607489 AGAACTGATGTGCAGGTGGC 60.607 55.000 0.00 0.00 46.92 5.01
2879 5796 2.234661 TCTAGAACTGATGTGCAGGTGG 59.765 50.000 0.00 0.00 46.92 4.61
2880 5797 3.599730 TCTAGAACTGATGTGCAGGTG 57.400 47.619 0.00 0.00 46.92 4.00
2884 5801 7.977789 TTAATTGTTCTAGAACTGATGTGCA 57.022 32.000 30.47 10.07 41.67 4.57
2896 5813 8.562052 TGAGCACATGCATATTAATTGTTCTAG 58.438 33.333 6.64 0.00 45.16 2.43
2898 5815 7.337480 TGAGCACATGCATATTAATTGTTCT 57.663 32.000 6.64 0.00 45.16 3.01
2909 5826 7.337689 AGACTCTTAAAAATGAGCACATGCATA 59.662 33.333 6.64 0.00 45.16 3.14
2933 5850 9.823647 GGAATGAATTATTACAGAGTGAGAAGA 57.176 33.333 0.00 0.00 29.39 2.87
2934 5851 9.605275 TGGAATGAATTATTACAGAGTGAGAAG 57.395 33.333 0.00 0.00 34.63 2.85
2940 5857 9.699410 TGGAAATGGAATGAATTATTACAGAGT 57.301 29.630 0.00 0.00 42.75 3.24
2943 5860 8.636213 AGCTGGAAATGGAATGAATTATTACAG 58.364 33.333 0.00 0.00 42.75 2.74
2944 5861 8.537728 AGCTGGAAATGGAATGAATTATTACA 57.462 30.769 0.00 0.00 43.61 2.41
2945 5862 9.468532 GAAGCTGGAAATGGAATGAATTATTAC 57.531 33.333 0.00 0.00 0.00 1.89
2946 5863 9.199645 TGAAGCTGGAAATGGAATGAATTATTA 57.800 29.630 0.00 0.00 0.00 0.98
3014 5958 9.851686 ATGGCATGAATAGAACATAGAACTTTA 57.148 29.630 0.00 0.00 0.00 1.85
3015 5959 8.757982 ATGGCATGAATAGAACATAGAACTTT 57.242 30.769 0.00 0.00 0.00 2.66
3016 5960 8.757982 AATGGCATGAATAGAACATAGAACTT 57.242 30.769 0.00 0.00 0.00 2.66
3017 5961 8.757982 AAATGGCATGAATAGAACATAGAACT 57.242 30.769 0.00 0.00 0.00 3.01
3031 5975 7.164230 ACCTTACGAAATAAAATGGCATGAA 57.836 32.000 0.00 0.00 0.00 2.57
3060 6004 8.147704 ACATACATCAACGGTGATAATGTATCA 58.852 33.333 28.77 9.54 42.88 2.15
3136 6111 4.016706 AGGTTTGAGGCGACCCCG 62.017 66.667 0.00 0.00 39.21 5.73
3241 6216 1.203112 TCTGCTCCTTCTCCTGTGACT 60.203 52.381 0.00 0.00 0.00 3.41
3314 6292 1.134580 CCCAACGATCAGAGCACATCT 60.135 52.381 0.00 0.00 39.56 2.90
3367 6345 0.727398 GAGCGAAGTGTATGGCAACC 59.273 55.000 0.00 0.00 0.00 3.77
3372 6350 4.592485 ATTCTAGGAGCGAAGTGTATGG 57.408 45.455 0.00 0.00 0.00 2.74
3406 6384 3.998341 GTCATGCCAGAAGGTAAAACGTA 59.002 43.478 0.00 0.00 37.19 3.57
3442 6420 1.550072 TGCAGCATTTCTAAAAGCCCC 59.450 47.619 0.00 0.00 33.41 5.80
3490 6468 3.742369 CCAAGACGCAGCATTTCATTTTT 59.258 39.130 0.00 0.00 0.00 1.94
3495 6473 0.250684 TCCCAAGACGCAGCATTTCA 60.251 50.000 0.00 0.00 0.00 2.69
3501 6479 1.578206 GGAAACTCCCAAGACGCAGC 61.578 60.000 0.00 0.00 0.00 5.25
3568 6553 1.765597 ACCAGACGGTTTGTCCTCCC 61.766 60.000 0.00 0.00 46.31 4.30
3656 6641 1.225704 CCCAGGTTGGCATCCTCTC 59.774 63.158 14.21 0.00 35.79 3.20
3682 6667 2.656002 TGAAGATGGAGGGTCTCTACG 58.344 52.381 0.00 0.00 0.00 3.51
3688 6673 4.848357 TGAGATTTTGAAGATGGAGGGTC 58.152 43.478 0.00 0.00 0.00 4.46
3698 8204 4.885413 TGCATGGGTTTGAGATTTTGAAG 58.115 39.130 0.00 0.00 0.00 3.02
3706 8213 2.100584 GTGTGTTTGCATGGGTTTGAGA 59.899 45.455 0.00 0.00 0.00 3.27
3732 8239 1.003839 ATGCAATGGTCGGTCGTGT 60.004 52.632 0.00 0.00 0.00 4.49
3733 8240 1.018752 TCATGCAATGGTCGGTCGTG 61.019 55.000 0.00 0.00 46.73 4.35
3734 8241 0.107703 ATCATGCAATGGTCGGTCGT 60.108 50.000 0.00 0.00 46.73 4.34
3735 8242 0.305617 CATCATGCAATGGTCGGTCG 59.694 55.000 0.00 0.00 46.73 4.79
3736 8243 0.029834 GCATCATGCAATGGTCGGTC 59.970 55.000 4.20 0.00 46.73 4.79
3737 8244 1.717791 CGCATCATGCAATGGTCGGT 61.718 55.000 11.00 0.00 46.73 4.69
3738 8245 1.009335 CGCATCATGCAATGGTCGG 60.009 57.895 11.00 0.00 46.73 4.79
3748 8255 7.856894 TCATTGTTTATGTGTATTCGCATCATG 59.143 33.333 1.26 0.00 42.76 3.07
3848 8359 5.889853 ACAATTCCAAGATACACAGATGCAT 59.110 36.000 0.00 0.00 0.00 3.96
3866 8377 6.478344 ACTTTCTAGAGATGCATCGACAATTC 59.522 38.462 20.67 11.65 0.00 2.17
3988 8510 8.615211 GTTCTGTAATCTTGCACATCATGATTA 58.385 33.333 5.16 8.32 43.53 1.75
4025 8547 0.745845 ATCCTGAGACATTGCGGCAC 60.746 55.000 0.05 0.00 0.00 5.01
4040 8566 0.254178 GTGCAGTGATGTGGGATCCT 59.746 55.000 12.58 0.00 0.00 3.24
4193 8724 5.048364 TCAATTGTTTTTATCCTCGGTGTGG 60.048 40.000 5.13 0.00 0.00 4.17
4195 8726 5.533154 TGTCAATTGTTTTTATCCTCGGTGT 59.467 36.000 5.13 0.00 0.00 4.16
4248 8784 0.871722 TGCAACTACACCATCAACGC 59.128 50.000 0.00 0.00 0.00 4.84
4463 9001 6.014584 AGTCTATTGTATGTATTGGCGATGGA 60.015 38.462 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.