Multiple sequence alignment - TraesCS1A01G257200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G257200 chr1A 100.000 3545 0 0 1 3545 449521185 449517641 0.000000e+00 6547.0
1 TraesCS1A01G257200 chr1A 92.690 342 24 1 55 395 251343771 251343430 3.180000e-135 492.0
2 TraesCS1A01G257200 chr1A 91.908 346 25 3 51 395 583151191 583151534 6.880000e-132 481.0
3 TraesCS1A01G257200 chr1D 95.030 2193 78 12 808 2982 349082996 349080817 0.000000e+00 3417.0
4 TraesCS1A01G257200 chr1D 89.813 481 34 8 3067 3545 349080814 349080347 1.410000e-168 603.0
5 TraesCS1A01G257200 chr1D 82.338 385 19 10 462 815 349084359 349083993 4.480000e-74 289.0
6 TraesCS1A01G257200 chr1D 91.358 162 12 2 2828 2988 349080146 349079986 1.660000e-53 220.0
7 TraesCS1A01G257200 chr1D 85.417 96 10 3 3427 3522 349081200 349081109 2.910000e-16 97.1
8 TraesCS1A01G257200 chr1B 94.218 1937 86 13 613 2536 470718443 470716520 0.000000e+00 2933.0
9 TraesCS1A01G257200 chr1B 83.665 502 50 21 2505 2985 470707515 470707025 9.030000e-121 444.0
10 TraesCS1A01G257200 chr1B 84.591 318 27 14 3010 3313 470707881 470707572 2.680000e-76 296.0
11 TraesCS1A01G257200 chr1B 92.045 176 14 0 3368 3543 470706688 470706513 7.600000e-62 248.0
12 TraesCS1A01G257200 chr1B 82.026 306 32 13 2601 2895 470716399 470716106 4.570000e-59 239.0
13 TraesCS1A01G257200 chr1B 80.168 358 38 23 2534 2869 470706703 470706357 1.640000e-58 237.0
14 TraesCS1A01G257200 chr1B 90.805 87 7 1 462 548 470718763 470718678 8.040000e-22 115.0
15 TraesCS1A01G257200 chr5D 75.633 1342 281 35 1043 2364 3632910 3634225 3.000000e-175 625.0
16 TraesCS1A01G257200 chr5D 76.870 1163 233 27 1217 2364 3660633 3659492 3.000000e-175 625.0
17 TraesCS1A01G257200 chr5D 75.895 1145 248 23 1231 2364 93862745 93861618 8.590000e-156 560.0
18 TraesCS1A01G257200 chr5D 75.371 1145 242 32 1234 2364 3636068 3637186 1.890000e-142 516.0
19 TraesCS1A01G257200 chr5D 92.625 339 23 2 58 395 542209351 542209688 1.480000e-133 486.0
20 TraesCS1A01G257200 chr5D 77.373 769 147 21 1605 2364 3654944 3654194 7.030000e-117 431.0
21 TraesCS1A01G257200 chr5B 77.618 1041 197 27 1231 2256 5072740 5071721 1.820000e-167 599.0
22 TraesCS1A01G257200 chr5B 78.032 742 135 17 1630 2364 5068976 5068256 3.250000e-120 442.0
23 TraesCS1A01G257200 chr5B 84.912 285 41 2 2081 2364 5058843 5059126 1.610000e-73 287.0
24 TraesCS1A01G257200 chr7D 76.178 1167 234 31 1217 2364 610421301 610420160 3.070000e-160 575.0
25 TraesCS1A01G257200 chr7D 93.548 341 21 1 56 395 154600099 154599759 1.140000e-139 507.0
26 TraesCS1A01G257200 chr7D 92.625 339 24 1 58 395 556705450 556705788 1.480000e-133 486.0
27 TraesCS1A01G257200 chr7D 92.375 341 25 1 56 395 20416556 20416896 5.320000e-133 484.0
28 TraesCS1A01G257200 chr7D 74.569 1160 261 24 1217 2364 608222746 608223883 8.900000e-131 477.0
29 TraesCS1A01G257200 chr7A 75.734 1158 255 16 1217 2364 700300509 700301650 3.090000e-155 558.0
30 TraesCS1A01G257200 chr7A 76.571 1050 220 16 1217 2256 700338327 700339360 1.440000e-153 553.0
31 TraesCS1A01G257200 chr5A 75.671 1155 255 22 1220 2364 87417574 87416436 1.440000e-153 553.0
32 TraesCS1A01G257200 chr5A 74.460 1343 289 44 1043 2364 2428088 2426779 6.740000e-147 531.0
33 TraesCS1A01G257200 chr5A 76.333 938 180 27 1431 2353 631504288 631505198 6.930000e-127 464.0
34 TraesCS1A01G257200 chr5A 77.565 731 136 22 1643 2364 2433124 2432413 1.970000e-112 416.0
35 TraesCS1A01G257200 chr5A 82.727 110 17 2 1462 1570 2542714 2542606 2.910000e-16 97.1
36 TraesCS1A01G257200 chr3D 93.529 340 20 2 57 395 12152654 12152316 4.080000e-139 505.0
37 TraesCS1A01G257200 chr4D 92.353 340 25 1 57 395 431414331 431414670 1.910000e-132 483.0
38 TraesCS1A01G257200 chr6A 91.111 360 25 7 41 395 602153524 602153167 6.880000e-132 481.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G257200 chr1A 449517641 449521185 3544 True 6547.000000 6547 100.000000 1 3545 1 chr1A.!!$R2 3544
1 TraesCS1A01G257200 chr1D 349079986 349084359 4373 True 925.220000 3417 88.791200 462 3545 5 chr1D.!!$R1 3083
2 TraesCS1A01G257200 chr1B 470716106 470718763 2657 True 1095.666667 2933 89.016333 462 2895 3 chr1B.!!$R2 2433
3 TraesCS1A01G257200 chr1B 470706357 470707881 1524 True 306.250000 444 85.117250 2505 3543 4 chr1B.!!$R1 1038
4 TraesCS1A01G257200 chr5D 3659492 3660633 1141 True 625.000000 625 76.870000 1217 2364 1 chr5D.!!$R2 1147
5 TraesCS1A01G257200 chr5D 3632910 3637186 4276 False 570.500000 625 75.502000 1043 2364 2 chr5D.!!$F2 1321
6 TraesCS1A01G257200 chr5D 93861618 93862745 1127 True 560.000000 560 75.895000 1231 2364 1 chr5D.!!$R3 1133
7 TraesCS1A01G257200 chr5D 3654194 3654944 750 True 431.000000 431 77.373000 1605 2364 1 chr5D.!!$R1 759
8 TraesCS1A01G257200 chr5B 5068256 5072740 4484 True 520.500000 599 77.825000 1231 2364 2 chr5B.!!$R1 1133
9 TraesCS1A01G257200 chr7D 610420160 610421301 1141 True 575.000000 575 76.178000 1217 2364 1 chr7D.!!$R2 1147
10 TraesCS1A01G257200 chr7D 608222746 608223883 1137 False 477.000000 477 74.569000 1217 2364 1 chr7D.!!$F3 1147
11 TraesCS1A01G257200 chr7A 700300509 700301650 1141 False 558.000000 558 75.734000 1217 2364 1 chr7A.!!$F1 1147
12 TraesCS1A01G257200 chr7A 700338327 700339360 1033 False 553.000000 553 76.571000 1217 2256 1 chr7A.!!$F2 1039
13 TraesCS1A01G257200 chr5A 87416436 87417574 1138 True 553.000000 553 75.671000 1220 2364 1 chr5A.!!$R4 1144
14 TraesCS1A01G257200 chr5A 2426779 2428088 1309 True 531.000000 531 74.460000 1043 2364 1 chr5A.!!$R1 1321
15 TraesCS1A01G257200 chr5A 631504288 631505198 910 False 464.000000 464 76.333000 1431 2353 1 chr5A.!!$F1 922
16 TraesCS1A01G257200 chr5A 2432413 2433124 711 True 416.000000 416 77.565000 1643 2364 1 chr5A.!!$R2 721

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
437 438 0.032515 TCCATAGTCAGGGAAGCGGA 60.033 55.0 0.00 0.00 29.79 5.54 F
460 461 0.035152 TGCTGACCATGACCATGACC 60.035 55.0 11.28 3.73 41.20 4.02 F
912 2139 0.163146 GCGGTAGAAACAAGCGTGTC 59.837 55.0 5.55 0.00 36.80 3.67 F
985 2226 0.461961 CAGGGGCTACACTACAGAGC 59.538 60.0 0.00 0.00 35.39 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1920 3210 1.323271 GGGAGCAGTCGATGTCCTCA 61.323 60.000 0.00 0.0 32.66 3.86 R
1982 3272 2.411904 CGCTCTTGCTCTTCTTCTTGT 58.588 47.619 0.00 0.0 36.97 3.16 R
2464 10079 0.385751 TCCTCGTCATCATCTTCGGC 59.614 55.000 0.00 0.0 0.00 5.54 R
2897 10577 2.289820 GCGCTAGGGTGGTTTATTAAGC 59.710 50.000 8.77 0.0 0.00 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.632638 ACTTATATTTAGTACGGAGGAAGTACA 57.367 33.333 8.86 0.00 44.92 2.90
38 39 8.757982 ATATTTAGTACGGAGGAAGTACAAGA 57.242 34.615 8.86 0.00 44.92 3.02
39 40 6.506500 TTTAGTACGGAGGAAGTACAAGAG 57.493 41.667 8.86 0.00 44.92 2.85
40 41 4.298103 AGTACGGAGGAAGTACAAGAGA 57.702 45.455 8.86 0.00 44.92 3.10
43 44 1.135333 CGGAGGAAGTACAAGAGAGGC 59.865 57.143 0.00 0.00 0.00 4.70
45 46 2.167487 GGAGGAAGTACAAGAGAGGCTG 59.833 54.545 0.00 0.00 0.00 4.85
47 48 3.243724 AGGAAGTACAAGAGAGGCTGTT 58.756 45.455 0.00 0.00 0.00 3.16
48 49 3.007398 AGGAAGTACAAGAGAGGCTGTTG 59.993 47.826 0.00 3.15 40.03 3.33
49 50 3.330267 GAAGTACAAGAGAGGCTGTTGG 58.670 50.000 8.81 0.00 38.76 3.77
52 53 3.901844 AGTACAAGAGAGGCTGTTGGTTA 59.098 43.478 8.81 0.00 38.76 2.85
53 54 3.127425 ACAAGAGAGGCTGTTGGTTAC 57.873 47.619 8.81 0.00 38.76 2.50
54 55 2.438021 ACAAGAGAGGCTGTTGGTTACA 59.562 45.455 8.81 0.00 38.76 2.41
55 56 3.118038 ACAAGAGAGGCTGTTGGTTACAA 60.118 43.478 8.81 0.00 38.76 2.41
56 57 4.074970 CAAGAGAGGCTGTTGGTTACAAT 58.925 43.478 0.00 0.00 39.13 2.71
58 59 4.729868 AGAGAGGCTGTTGGTTACAATTT 58.270 39.130 0.00 0.00 39.13 1.82
88 89 4.297207 GAGGAATACTCCCGGCCT 57.703 61.111 0.00 0.00 43.64 5.19
89 90 2.051105 GAGGAATACTCCCGGCCTC 58.949 63.158 0.00 6.31 43.64 4.70
91 92 0.760945 AGGAATACTCCCGGCCTCTG 60.761 60.000 0.00 0.00 43.64 3.35
92 93 1.069935 GAATACTCCCGGCCTCTGC 59.930 63.158 0.00 0.00 0.00 4.26
93 94 1.686325 GAATACTCCCGGCCTCTGCA 61.686 60.000 0.00 0.00 40.13 4.41
94 95 1.056700 AATACTCCCGGCCTCTGCAT 61.057 55.000 0.00 0.00 40.13 3.96
96 97 2.589610 TACTCCCGGCCTCTGCATCT 62.590 60.000 0.00 0.00 40.13 2.90
97 98 3.457625 CTCCCGGCCTCTGCATCTG 62.458 68.421 0.00 0.00 40.13 2.90
99 100 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
100 101 2.202987 CGGCCTCTGCATCTGGAC 60.203 66.667 0.00 0.35 40.13 4.02
101 102 2.202987 GGCCTCTGCATCTGGACG 60.203 66.667 0.00 0.00 40.13 4.79
102 103 2.725312 GGCCTCTGCATCTGGACGA 61.725 63.158 0.00 0.00 40.13 4.20
103 104 1.445095 GCCTCTGCATCTGGACGAT 59.555 57.895 0.00 0.00 37.47 3.73
112 113 1.040646 ATCTGGACGATGCATACGGT 58.959 50.000 18.34 9.62 34.93 4.83
113 114 0.384309 TCTGGACGATGCATACGGTC 59.616 55.000 18.34 16.09 34.93 4.79
114 115 0.102300 CTGGACGATGCATACGGTCA 59.898 55.000 20.24 15.70 34.93 4.02
115 116 0.533032 TGGACGATGCATACGGTCAA 59.467 50.000 20.24 11.08 34.93 3.18
116 117 1.138069 TGGACGATGCATACGGTCAAT 59.862 47.619 20.24 3.82 34.93 2.57
117 118 2.210116 GGACGATGCATACGGTCAATT 58.790 47.619 20.24 3.27 34.93 2.32
120 121 4.451096 GGACGATGCATACGGTCAATTTAT 59.549 41.667 20.24 1.62 34.93 1.40
121 122 5.049680 GGACGATGCATACGGTCAATTTATT 60.050 40.000 20.24 1.06 34.93 1.40
122 123 6.146510 GGACGATGCATACGGTCAATTTATTA 59.853 38.462 20.24 0.00 34.93 0.98
125 126 8.564574 ACGATGCATACGGTCAATTTATTAATT 58.435 29.630 18.34 0.00 33.26 1.40
150 151 6.592798 TTAACACAAGACCTTACAAAGTCG 57.407 37.500 0.00 0.00 0.00 4.18
152 153 5.266733 ACACAAGACCTTACAAAGTCGTA 57.733 39.130 0.00 0.00 0.00 3.43
153 154 5.045872 ACACAAGACCTTACAAAGTCGTAC 58.954 41.667 0.00 0.00 0.00 3.67
154 155 5.045215 CACAAGACCTTACAAAGTCGTACA 58.955 41.667 0.00 0.00 0.00 2.90
155 156 5.521010 CACAAGACCTTACAAAGTCGTACAA 59.479 40.000 0.00 0.00 0.00 2.41
156 157 5.521372 ACAAGACCTTACAAAGTCGTACAAC 59.479 40.000 0.00 0.00 0.00 3.32
157 158 5.266733 AGACCTTACAAAGTCGTACAACA 57.733 39.130 0.00 0.00 0.00 3.33
159 160 6.285990 AGACCTTACAAAGTCGTACAACAAT 58.714 36.000 0.00 0.00 0.00 2.71
160 161 7.436118 AGACCTTACAAAGTCGTACAACAATA 58.564 34.615 0.00 0.00 0.00 1.90
161 162 7.927629 AGACCTTACAAAGTCGTACAACAATAA 59.072 33.333 0.00 0.00 0.00 1.40
162 163 8.080083 ACCTTACAAAGTCGTACAACAATAAG 57.920 34.615 0.00 0.00 0.00 1.73
163 164 7.927629 ACCTTACAAAGTCGTACAACAATAAGA 59.072 33.333 0.00 0.00 0.00 2.10
164 165 8.219105 CCTTACAAAGTCGTACAACAATAAGAC 58.781 37.037 0.00 0.00 34.79 3.01
166 167 6.050432 ACAAAGTCGTACAACAATAAGACCA 58.950 36.000 0.00 0.00 35.04 4.02
167 168 6.539464 ACAAAGTCGTACAACAATAAGACCAA 59.461 34.615 0.00 0.00 35.04 3.67
168 169 7.066043 ACAAAGTCGTACAACAATAAGACCAAA 59.934 33.333 0.00 0.00 35.04 3.28
171 172 6.423001 AGTCGTACAACAATAAGACCAAAGTC 59.577 38.462 0.00 0.00 43.89 3.01
172 173 6.201425 GTCGTACAACAATAAGACCAAAGTCA 59.799 38.462 0.00 0.00 46.15 3.41
173 174 6.201425 TCGTACAACAATAAGACCAAAGTCAC 59.799 38.462 0.00 0.00 46.15 3.67
174 175 5.767816 ACAACAATAAGACCAAAGTCACC 57.232 39.130 0.00 0.00 46.15 4.02
177 178 4.062991 ACAATAAGACCAAAGTCACCGTC 58.937 43.478 0.00 0.00 46.15 4.79
178 179 4.202326 ACAATAAGACCAAAGTCACCGTCT 60.202 41.667 0.00 0.00 46.15 4.18
179 180 2.240493 AAGACCAAAGTCACCGTCTG 57.760 50.000 0.00 0.00 46.15 3.51
180 181 1.410004 AGACCAAAGTCACCGTCTGA 58.590 50.000 0.00 0.00 46.15 3.27
181 182 1.341531 AGACCAAAGTCACCGTCTGAG 59.658 52.381 0.00 0.00 46.15 3.35
182 183 0.249911 ACCAAAGTCACCGTCTGAGC 60.250 55.000 0.00 0.00 0.00 4.26
183 184 0.249868 CCAAAGTCACCGTCTGAGCA 60.250 55.000 0.00 0.00 0.00 4.26
184 185 1.581934 CAAAGTCACCGTCTGAGCAA 58.418 50.000 0.00 0.00 0.00 3.91
185 186 1.261619 CAAAGTCACCGTCTGAGCAAC 59.738 52.381 0.00 0.00 0.00 4.17
187 188 1.115930 AGTCACCGTCTGAGCAACCT 61.116 55.000 0.00 0.00 0.00 3.50
188 189 0.667792 GTCACCGTCTGAGCAACCTC 60.668 60.000 0.00 0.00 38.62 3.85
189 190 0.827925 TCACCGTCTGAGCAACCTCT 60.828 55.000 0.00 0.00 38.93 3.69
190 191 0.668706 CACCGTCTGAGCAACCTCTG 60.669 60.000 0.00 0.00 38.93 3.35
191 192 1.115930 ACCGTCTGAGCAACCTCTGT 61.116 55.000 0.00 0.00 38.93 3.41
192 193 0.389166 CCGTCTGAGCAACCTCTGTC 60.389 60.000 0.00 0.00 38.93 3.51
193 194 0.730834 CGTCTGAGCAACCTCTGTCG 60.731 60.000 0.00 0.00 40.09 4.35
195 196 1.181741 TCTGAGCAACCTCTGTCGCT 61.182 55.000 0.00 0.00 38.93 4.93
197 198 0.243907 TGAGCAACCTCTGTCGCTAC 59.756 55.000 0.00 0.00 38.93 3.58
198 199 0.528470 GAGCAACCTCTGTCGCTACT 59.472 55.000 0.00 0.00 34.12 2.57
199 200 0.528470 AGCAACCTCTGTCGCTACTC 59.472 55.000 0.00 0.00 31.60 2.59
200 201 0.458716 GCAACCTCTGTCGCTACTCC 60.459 60.000 0.00 0.00 0.00 3.85
201 202 1.178276 CAACCTCTGTCGCTACTCCT 58.822 55.000 0.00 0.00 0.00 3.69
202 203 2.366533 CAACCTCTGTCGCTACTCCTA 58.633 52.381 0.00 0.00 0.00 2.94
203 204 2.952978 CAACCTCTGTCGCTACTCCTAT 59.047 50.000 0.00 0.00 0.00 2.57
204 205 2.853705 ACCTCTGTCGCTACTCCTATC 58.146 52.381 0.00 0.00 0.00 2.08
205 206 2.440253 ACCTCTGTCGCTACTCCTATCT 59.560 50.000 0.00 0.00 0.00 1.98
207 208 4.250464 CCTCTGTCGCTACTCCTATCTAG 58.750 52.174 0.00 0.00 0.00 2.43
208 209 3.666274 TCTGTCGCTACTCCTATCTAGC 58.334 50.000 0.00 0.00 33.35 3.42
209 210 3.325425 TCTGTCGCTACTCCTATCTAGCT 59.675 47.826 0.00 0.00 34.36 3.32
210 211 3.403968 TGTCGCTACTCCTATCTAGCTG 58.596 50.000 0.00 0.00 34.36 4.24
213 214 4.094294 GTCGCTACTCCTATCTAGCTGATG 59.906 50.000 0.00 0.00 36.65 3.07
214 215 4.020128 TCGCTACTCCTATCTAGCTGATGA 60.020 45.833 0.00 0.00 36.65 2.92
216 217 5.163764 CGCTACTCCTATCTAGCTGATGAAG 60.164 48.000 0.00 0.66 36.65 3.02
217 218 5.125417 GCTACTCCTATCTAGCTGATGAAGG 59.875 48.000 0.00 2.88 36.65 3.46
218 219 4.415596 ACTCCTATCTAGCTGATGAAGGG 58.584 47.826 0.00 0.00 33.64 3.95
219 220 3.768757 CTCCTATCTAGCTGATGAAGGGG 59.231 52.174 0.00 0.00 33.64 4.79
220 221 2.235898 CCTATCTAGCTGATGAAGGGGC 59.764 54.545 0.00 0.00 36.65 5.80
221 222 0.683973 ATCTAGCTGATGAAGGGGCG 59.316 55.000 0.00 0.00 33.43 6.13
222 223 1.596477 CTAGCTGATGAAGGGGCGC 60.596 63.158 0.00 0.00 0.00 6.53
223 224 2.037620 CTAGCTGATGAAGGGGCGCT 62.038 60.000 7.64 0.00 0.00 5.92
225 226 2.586245 CTGATGAAGGGGCGCTGA 59.414 61.111 7.64 0.00 0.00 4.26
227 228 1.153107 TGATGAAGGGGCGCTGATG 60.153 57.895 7.64 0.00 0.00 3.07
228 229 1.895707 GATGAAGGGGCGCTGATGG 60.896 63.158 7.64 0.00 0.00 3.51
231 232 3.011517 AAGGGGCGCTGATGGTCT 61.012 61.111 7.64 0.00 0.00 3.85
232 233 3.335356 AAGGGGCGCTGATGGTCTG 62.335 63.158 7.64 0.00 0.00 3.51
233 234 4.864334 GGGGCGCTGATGGTCTGG 62.864 72.222 7.64 0.00 0.00 3.86
234 235 4.864334 GGGCGCTGATGGTCTGGG 62.864 72.222 7.64 0.00 0.00 4.45
237 238 3.790437 CGCTGATGGTCTGGGCCT 61.790 66.667 4.53 0.00 0.00 5.19
238 239 2.434843 CGCTGATGGTCTGGGCCTA 61.435 63.158 4.53 0.00 0.00 3.93
239 240 1.915228 GCTGATGGTCTGGGCCTAA 59.085 57.895 4.53 0.00 0.00 2.69
240 241 0.475906 GCTGATGGTCTGGGCCTAAT 59.524 55.000 4.53 0.00 0.00 1.73
244 245 2.054799 GATGGTCTGGGCCTAATACCA 58.945 52.381 21.02 21.02 43.93 3.25
245 246 1.974028 TGGTCTGGGCCTAATACCAA 58.026 50.000 17.71 4.93 37.29 3.67
246 247 2.280103 TGGTCTGGGCCTAATACCAAA 58.720 47.619 17.71 0.00 37.29 3.28
247 248 2.025699 TGGTCTGGGCCTAATACCAAAC 60.026 50.000 17.71 0.00 37.29 2.93
248 249 2.025699 GGTCTGGGCCTAATACCAAACA 60.026 50.000 13.69 0.00 36.09 2.83
249 250 3.279434 GTCTGGGCCTAATACCAAACAG 58.721 50.000 4.53 0.00 36.09 3.16
250 251 3.054655 GTCTGGGCCTAATACCAAACAGA 60.055 47.826 4.53 0.00 36.09 3.41
251 252 3.054655 TCTGGGCCTAATACCAAACAGAC 60.055 47.826 4.53 0.00 36.09 3.51
252 253 2.025699 TGGGCCTAATACCAAACAGACC 60.026 50.000 4.53 0.00 32.89 3.85
253 254 2.241430 GGGCCTAATACCAAACAGACCT 59.759 50.000 0.84 0.00 0.00 3.85
254 255 3.542648 GGCCTAATACCAAACAGACCTC 58.457 50.000 0.00 0.00 0.00 3.85
256 257 3.195661 CCTAATACCAAACAGACCTCGC 58.804 50.000 0.00 0.00 0.00 5.03
257 258 2.851263 AATACCAAACAGACCTCGCA 57.149 45.000 0.00 0.00 0.00 5.10
260 261 0.249911 ACCAAACAGACCTCGCAGTC 60.250 55.000 0.00 0.00 37.01 3.51
261 262 0.249868 CCAAACAGACCTCGCAGTCA 60.250 55.000 7.30 0.00 39.34 3.41
262 263 1.581934 CAAACAGACCTCGCAGTCAA 58.418 50.000 7.30 0.00 39.34 3.18
264 265 1.583054 AACAGACCTCGCAGTCAAAC 58.417 50.000 7.30 0.00 39.34 2.93
265 266 0.249911 ACAGACCTCGCAGTCAAACC 60.250 55.000 7.30 0.00 39.34 3.27
266 267 0.034059 CAGACCTCGCAGTCAAACCT 59.966 55.000 7.30 0.00 39.34 3.50
268 269 1.968493 AGACCTCGCAGTCAAACCTAA 59.032 47.619 7.30 0.00 39.34 2.69
269 270 2.067013 GACCTCGCAGTCAAACCTAAC 58.933 52.381 0.36 0.00 36.73 2.34
270 271 1.414919 ACCTCGCAGTCAAACCTAACA 59.585 47.619 0.00 0.00 0.00 2.41
272 273 2.673368 CCTCGCAGTCAAACCTAACATC 59.327 50.000 0.00 0.00 0.00 3.06
273 274 3.589988 CTCGCAGTCAAACCTAACATCT 58.410 45.455 0.00 0.00 0.00 2.90
274 275 4.381612 CCTCGCAGTCAAACCTAACATCTA 60.382 45.833 0.00 0.00 0.00 1.98
276 277 5.168569 TCGCAGTCAAACCTAACATCTAAG 58.831 41.667 0.00 0.00 0.00 2.18
277 278 5.047590 TCGCAGTCAAACCTAACATCTAAGA 60.048 40.000 0.00 0.00 0.00 2.10
278 279 5.062308 CGCAGTCAAACCTAACATCTAAGAC 59.938 44.000 0.00 0.00 0.00 3.01
279 280 5.351740 GCAGTCAAACCTAACATCTAAGACC 59.648 44.000 0.00 0.00 0.00 3.85
282 283 8.311836 CAGTCAAACCTAACATCTAAGACCTAA 58.688 37.037 0.00 0.00 0.00 2.69
283 284 8.532819 AGTCAAACCTAACATCTAAGACCTAAG 58.467 37.037 0.00 0.00 0.00 2.18
284 285 8.529476 GTCAAACCTAACATCTAAGACCTAAGA 58.471 37.037 0.00 0.00 0.00 2.10
285 286 9.268282 TCAAACCTAACATCTAAGACCTAAGAT 57.732 33.333 0.00 0.00 32.63 2.40
286 287 9.535878 CAAACCTAACATCTAAGACCTAAGATC 57.464 37.037 0.00 0.00 29.93 2.75
287 288 7.842887 ACCTAACATCTAAGACCTAAGATCC 57.157 40.000 0.00 0.00 29.93 3.36
289 290 6.782988 CCTAACATCTAAGACCTAAGATCCCA 59.217 42.308 0.00 0.00 29.93 4.37
290 291 7.290248 CCTAACATCTAAGACCTAAGATCCCAA 59.710 40.741 0.00 0.00 29.93 4.12
291 292 6.487299 ACATCTAAGACCTAAGATCCCAAC 57.513 41.667 0.00 0.00 29.93 3.77
292 293 5.367060 ACATCTAAGACCTAAGATCCCAACC 59.633 44.000 0.00 0.00 29.93 3.77
294 295 5.347124 TCTAAGACCTAAGATCCCAACCAA 58.653 41.667 0.00 0.00 0.00 3.67
295 296 5.788533 TCTAAGACCTAAGATCCCAACCAAA 59.211 40.000 0.00 0.00 0.00 3.28
296 297 5.333566 AAGACCTAAGATCCCAACCAAAA 57.666 39.130 0.00 0.00 0.00 2.44
297 298 4.663334 AGACCTAAGATCCCAACCAAAAC 58.337 43.478 0.00 0.00 0.00 2.43
298 299 3.418047 ACCTAAGATCCCAACCAAAACG 58.582 45.455 0.00 0.00 0.00 3.60
299 300 3.181437 ACCTAAGATCCCAACCAAAACGT 60.181 43.478 0.00 0.00 0.00 3.99
300 301 3.439129 CCTAAGATCCCAACCAAAACGTC 59.561 47.826 0.00 0.00 0.00 4.34
301 302 2.951229 AGATCCCAACCAAAACGTCT 57.049 45.000 0.00 0.00 0.00 4.18
302 303 2.504367 AGATCCCAACCAAAACGTCTG 58.496 47.619 0.00 0.00 0.00 3.51
303 304 0.958822 ATCCCAACCAAAACGTCTGC 59.041 50.000 0.00 0.00 0.00 4.26
304 305 1.104577 TCCCAACCAAAACGTCTGCC 61.105 55.000 0.00 0.00 0.00 4.85
305 306 1.008995 CCAACCAAAACGTCTGCCG 60.009 57.895 0.00 0.00 44.03 5.69
306 307 1.008995 CAACCAAAACGTCTGCCGG 60.009 57.895 0.00 0.00 42.24 6.13
307 308 1.452470 AACCAAAACGTCTGCCGGT 60.452 52.632 1.90 0.00 42.24 5.28
308 309 0.179051 AACCAAAACGTCTGCCGGTA 60.179 50.000 1.90 0.00 42.24 4.02
310 311 0.446222 CCAAAACGTCTGCCGGTATG 59.554 55.000 1.90 0.00 42.24 2.39
311 312 0.446222 CAAAACGTCTGCCGGTATGG 59.554 55.000 1.90 0.00 42.24 2.74
312 313 0.675522 AAAACGTCTGCCGGTATGGG 60.676 55.000 1.90 0.00 42.24 4.00
326 327 3.716195 TGGGCATCCACCAGTCGG 61.716 66.667 0.00 0.00 38.32 4.79
327 328 4.489771 GGGCATCCACCAGTCGGG 62.490 72.222 0.00 0.00 44.81 5.14
331 332 4.082523 ATCCACCAGTCGGGCGTG 62.083 66.667 0.00 0.00 42.05 5.34
337 338 4.803426 CAGTCGGGCGTGCTCCTC 62.803 72.222 0.00 0.00 0.00 3.71
340 341 3.390521 TCGGGCGTGCTCCTCAAT 61.391 61.111 0.00 0.00 0.00 2.57
341 342 2.892425 CGGGCGTGCTCCTCAATC 60.892 66.667 0.00 0.00 0.00 2.67
342 343 2.268920 GGGCGTGCTCCTCAATCA 59.731 61.111 0.00 0.00 0.00 2.57
343 344 1.817099 GGGCGTGCTCCTCAATCAG 60.817 63.158 0.00 0.00 0.00 2.90
344 345 1.817099 GGCGTGCTCCTCAATCAGG 60.817 63.158 0.00 0.00 45.15 3.86
354 355 1.901538 CTCAATCAGGACGTCTGTCG 58.098 55.000 16.46 1.70 46.49 4.35
356 357 0.458543 CAATCAGGACGTCTGTCGGG 60.459 60.000 16.46 0.00 46.49 5.14
359 360 0.034767 TCAGGACGTCTGTCGGGTAT 60.035 55.000 16.46 0.00 46.49 2.73
360 361 0.100682 CAGGACGTCTGTCGGGTATG 59.899 60.000 16.46 0.00 46.49 2.39
362 363 0.381089 GGACGTCTGTCGGGTATGAG 59.619 60.000 16.46 0.00 46.49 2.90
363 364 1.376543 GACGTCTGTCGGGTATGAGA 58.623 55.000 8.70 0.00 44.69 3.27
365 366 4.139302 GACGTCTGTCGGGTATGAGACC 62.139 59.091 8.70 0.00 44.69 3.85
372 373 4.835927 GGTATGAGACCGCCACAG 57.164 61.111 0.00 0.00 38.87 3.66
373 374 1.521681 GGTATGAGACCGCCACAGC 60.522 63.158 0.00 0.00 38.87 4.40
374 375 1.218047 GTATGAGACCGCCACAGCA 59.782 57.895 0.00 0.00 39.83 4.41
375 376 0.391130 GTATGAGACCGCCACAGCAA 60.391 55.000 0.00 0.00 39.83 3.91
376 377 0.391130 TATGAGACCGCCACAGCAAC 60.391 55.000 0.00 0.00 39.83 4.17
377 378 3.050275 GAGACCGCCACAGCAACC 61.050 66.667 0.00 0.00 39.83 3.77
378 379 3.537206 GAGACCGCCACAGCAACCT 62.537 63.158 0.00 0.00 39.83 3.50
379 380 3.357079 GACCGCCACAGCAACCTG 61.357 66.667 0.00 0.00 44.80 4.00
390 391 2.989909 CAGCAACCTGTCACATATCCA 58.010 47.619 0.00 0.00 34.31 3.41
391 392 3.548770 CAGCAACCTGTCACATATCCAT 58.451 45.455 0.00 0.00 34.31 3.41
392 393 3.562973 CAGCAACCTGTCACATATCCATC 59.437 47.826 0.00 0.00 34.31 3.51
393 394 3.457380 AGCAACCTGTCACATATCCATCT 59.543 43.478 0.00 0.00 0.00 2.90
394 395 4.080129 AGCAACCTGTCACATATCCATCTT 60.080 41.667 0.00 0.00 0.00 2.40
395 396 5.130975 AGCAACCTGTCACATATCCATCTTA 59.869 40.000 0.00 0.00 0.00 2.10
396 397 5.822519 GCAACCTGTCACATATCCATCTTAA 59.177 40.000 0.00 0.00 0.00 1.85
397 398 6.318648 GCAACCTGTCACATATCCATCTTAAA 59.681 38.462 0.00 0.00 0.00 1.52
398 399 7.148086 GCAACCTGTCACATATCCATCTTAAAA 60.148 37.037 0.00 0.00 0.00 1.52
399 400 8.739039 CAACCTGTCACATATCCATCTTAAAAA 58.261 33.333 0.00 0.00 0.00 1.94
400 401 9.479549 AACCTGTCACATATCCATCTTAAAAAT 57.520 29.630 0.00 0.00 0.00 1.82
401 402 9.125026 ACCTGTCACATATCCATCTTAAAAATC 57.875 33.333 0.00 0.00 0.00 2.17
402 403 9.347240 CCTGTCACATATCCATCTTAAAAATCT 57.653 33.333 0.00 0.00 0.00 2.40
410 411 7.579761 ATCCATCTTAAAAATCTTCTGAGGC 57.420 36.000 0.00 0.00 0.00 4.70
411 412 6.725364 TCCATCTTAAAAATCTTCTGAGGCT 58.275 36.000 0.00 0.00 0.00 4.58
412 413 6.600822 TCCATCTTAAAAATCTTCTGAGGCTG 59.399 38.462 0.00 0.00 0.00 4.85
413 414 6.376581 CCATCTTAAAAATCTTCTGAGGCTGT 59.623 38.462 0.00 0.00 0.00 4.40
414 415 7.094032 CCATCTTAAAAATCTTCTGAGGCTGTT 60.094 37.037 0.00 0.00 0.00 3.16
415 416 7.206981 TCTTAAAAATCTTCTGAGGCTGTTG 57.793 36.000 0.00 0.00 0.00 3.33
416 417 4.861102 AAAAATCTTCTGAGGCTGTTGG 57.139 40.909 0.00 0.00 0.00 3.77
417 418 2.503895 AATCTTCTGAGGCTGTTGGG 57.496 50.000 0.00 0.00 0.00 4.12
418 419 1.366319 ATCTTCTGAGGCTGTTGGGT 58.634 50.000 0.00 0.00 0.00 4.51
419 420 0.687354 TCTTCTGAGGCTGTTGGGTC 59.313 55.000 0.00 0.00 0.00 4.46
420 421 0.322008 CTTCTGAGGCTGTTGGGTCC 60.322 60.000 0.00 0.00 0.00 4.46
421 422 1.059584 TTCTGAGGCTGTTGGGTCCA 61.060 55.000 0.00 0.00 0.00 4.02
422 423 0.842030 TCTGAGGCTGTTGGGTCCAT 60.842 55.000 0.00 0.00 0.00 3.41
423 424 0.911769 CTGAGGCTGTTGGGTCCATA 59.088 55.000 0.00 0.00 0.00 2.74
424 425 0.911769 TGAGGCTGTTGGGTCCATAG 59.088 55.000 0.00 0.00 0.00 2.23
425 426 0.912486 GAGGCTGTTGGGTCCATAGT 59.088 55.000 0.00 0.00 0.00 2.12
426 427 0.912486 AGGCTGTTGGGTCCATAGTC 59.088 55.000 0.00 0.00 0.00 2.59
427 428 0.618458 GGCTGTTGGGTCCATAGTCA 59.382 55.000 0.00 0.00 0.00 3.41
428 429 1.407437 GGCTGTTGGGTCCATAGTCAG 60.407 57.143 0.00 0.19 0.00 3.51
429 430 1.407437 GCTGTTGGGTCCATAGTCAGG 60.407 57.143 0.00 0.00 0.00 3.86
430 431 1.210478 CTGTTGGGTCCATAGTCAGGG 59.790 57.143 0.00 0.00 0.00 4.45
431 432 1.203376 TGTTGGGTCCATAGTCAGGGA 60.203 52.381 0.00 0.00 30.39 4.20
432 433 1.913419 GTTGGGTCCATAGTCAGGGAA 59.087 52.381 0.00 0.00 36.11 3.97
433 434 1.879575 TGGGTCCATAGTCAGGGAAG 58.120 55.000 0.00 0.00 36.11 3.46
434 435 0.470341 GGGTCCATAGTCAGGGAAGC 59.530 60.000 0.00 0.00 36.11 3.86
435 436 0.105039 GGTCCATAGTCAGGGAAGCG 59.895 60.000 0.00 0.00 36.11 4.68
436 437 0.105039 GTCCATAGTCAGGGAAGCGG 59.895 60.000 0.00 0.00 36.11 5.52
437 438 0.032515 TCCATAGTCAGGGAAGCGGA 60.033 55.000 0.00 0.00 29.79 5.54
438 439 0.390860 CCATAGTCAGGGAAGCGGAG 59.609 60.000 0.00 0.00 0.00 4.63
459 460 2.048444 ATGCTGACCATGACCATGAC 57.952 50.000 11.28 6.03 41.20 3.06
460 461 0.035152 TGCTGACCATGACCATGACC 60.035 55.000 11.28 3.73 41.20 4.02
477 478 1.665679 GACCATGTTCCATGTGCTACG 59.334 52.381 3.75 0.00 0.00 3.51
478 479 1.003118 ACCATGTTCCATGTGCTACGT 59.997 47.619 0.00 0.00 0.00 3.57
479 480 2.235155 ACCATGTTCCATGTGCTACGTA 59.765 45.455 0.00 0.00 0.00 3.57
480 481 2.607635 CCATGTTCCATGTGCTACGTAC 59.392 50.000 0.00 0.00 0.00 3.67
494 498 5.686397 GTGCTACGTACCTGCTAAATCTAAG 59.314 44.000 6.82 0.00 0.00 2.18
509 513 9.072375 GCTAAATCTAAGGAAGCCAAATCTAAT 57.928 33.333 0.00 0.00 0.00 1.73
676 887 5.344128 CCGCTGATTTTTCTTGAAATGTGAG 59.656 40.000 0.00 0.00 29.75 3.51
725 945 2.597510 GGCCGCCAAGTTCCTGTT 60.598 61.111 3.91 0.00 0.00 3.16
749 969 5.537188 TGCTTTGGTTCCATATTTGTGAAC 58.463 37.500 8.15 8.15 38.08 3.18
760 980 5.748152 CCATATTTGTGAACGGCCATTTTAG 59.252 40.000 2.24 0.00 0.00 1.85
799 1019 0.538118 TCCGTTACATTCCTTCCCGG 59.462 55.000 0.00 0.00 35.41 5.73
821 2045 6.649557 CCGGCGAAGGAATAAAGTTTCTATAT 59.350 38.462 9.30 0.00 0.00 0.86
855 2080 7.364056 CCAGGAATTCATCAAAAGGCTTATGAA 60.364 37.037 20.39 20.39 41.24 2.57
864 2089 9.136952 CATCAAAAGGCTTATGAAAAGAAGAAG 57.863 33.333 0.00 0.00 0.00 2.85
900 2126 0.394938 TGGTTTGAGCAAGCGGTAGA 59.605 50.000 0.00 0.00 35.44 2.59
912 2139 0.163146 GCGGTAGAAACAAGCGTGTC 59.837 55.000 5.55 0.00 36.80 3.67
985 2226 0.461961 CAGGGGCTACACTACAGAGC 59.538 60.000 0.00 0.00 35.39 4.09
1773 3063 3.081409 TACCTGCTCTTCGGGCCC 61.081 66.667 13.57 13.57 45.54 5.80
1842 3132 0.792640 ACTACGACGTGTACGACCTG 59.207 55.000 11.56 0.61 43.02 4.00
1920 3210 1.359848 GCAAGTCCATCATCGTCGTT 58.640 50.000 0.00 0.00 0.00 3.85
1978 3268 4.024472 AGCGCAAGAAGAAGAAGAAGAAAC 60.024 41.667 11.47 0.00 43.02 2.78
1982 3272 6.564328 GCAAGAAGAAGAAGAAGAAACCAAA 58.436 36.000 0.00 0.00 0.00 3.28
2306 9921 1.984288 ATCCGGCAACTTCTAGGGGC 61.984 60.000 0.00 0.00 0.00 5.80
2313 9928 1.065418 CAACTTCTAGGGGCGGTCAAT 60.065 52.381 0.00 0.00 0.00 2.57
2464 10079 1.153667 GCAGAGCACGAAGAGGGAG 60.154 63.158 0.00 0.00 0.00 4.30
2635 10308 7.915923 ACTTGTACTCGTACATAACATCATCAG 59.084 37.037 10.40 4.31 44.54 2.90
2690 10369 3.626028 TGTGAGATGATGATACGGTCG 57.374 47.619 0.00 0.00 0.00 4.79
2720 10399 3.545426 GCGTCCACTTGTTTCTGTTGTAC 60.545 47.826 0.00 0.00 0.00 2.90
2728 10407 7.065803 CCACTTGTTTCTGTTGTACTATATGGG 59.934 40.741 0.00 0.00 0.00 4.00
2883 10563 0.984995 GGCTAGTGACAAGGTTCCCT 59.015 55.000 0.00 0.00 33.87 4.20
2889 10569 2.152016 GTGACAAGGTTCCCTTAGTGC 58.848 52.381 0.00 0.00 42.67 4.40
2897 10577 4.082125 AGGTTCCCTTAGTGCAAATTCTG 58.918 43.478 0.00 0.00 0.00 3.02
2977 10657 6.834168 TCATGTGGAAACTTTAGGGAATTC 57.166 37.500 0.00 0.00 0.00 2.17
2985 10665 7.045416 GGAAACTTTAGGGAATTCTCTCTCTC 58.955 42.308 12.19 1.59 33.13 3.20
2987 10667 7.418337 AACTTTAGGGAATTCTCTCTCTCTC 57.582 40.000 12.19 0.00 33.13 3.20
2988 10668 6.741724 ACTTTAGGGAATTCTCTCTCTCTCT 58.258 40.000 12.19 0.00 33.13 3.10
2989 10669 6.833933 ACTTTAGGGAATTCTCTCTCTCTCTC 59.166 42.308 12.19 0.00 33.13 3.20
2990 10670 6.590656 TTAGGGAATTCTCTCTCTCTCTCT 57.409 41.667 12.19 0.00 33.13 3.10
2991 10671 5.053978 AGGGAATTCTCTCTCTCTCTCTC 57.946 47.826 0.61 0.00 0.00 3.20
2992 10672 4.728860 AGGGAATTCTCTCTCTCTCTCTCT 59.271 45.833 0.61 0.00 0.00 3.10
2993 10673 5.066593 GGGAATTCTCTCTCTCTCTCTCTC 58.933 50.000 5.23 0.00 0.00 3.20
2995 10675 5.994668 GGAATTCTCTCTCTCTCTCTCTCTC 59.005 48.000 5.23 0.00 0.00 3.20
2996 10676 6.183361 GGAATTCTCTCTCTCTCTCTCTCTCT 60.183 46.154 5.23 0.00 0.00 3.10
2997 10677 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
2998 10678 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2999 10679 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3000 10680 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3001 10681 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3002 10682 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3003 10683 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3004 10684 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3005 10685 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3006 10686 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3007 10687 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3008 10688 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3009 10689 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3010 10690 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3011 10691 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3012 10692 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3013 10693 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3014 10694 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3015 10695 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3016 10696 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3017 10697 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3018 10698 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3019 10699 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3020 10700 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3021 10701 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3022 10702 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3023 10703 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3024 10704 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3025 10705 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3026 10706 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3027 10707 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3028 10708 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3029 10709 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3030 10710 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3031 10711 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3032 10712 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3033 10713 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3034 10714 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3035 10715 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3036 10716 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3037 10717 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3038 10718 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3039 10719 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3040 10720 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3041 10721 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3042 10722 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
3043 10723 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
3044 10724 3.885901 TCTCTCTCTCTCTCTCTCTCTCG 59.114 52.174 0.00 0.00 0.00 4.04
3045 10725 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63
3046 10726 2.695666 CTCTCTCTCTCTCTCTCTCGGT 59.304 54.545 0.00 0.00 0.00 4.69
3047 10727 2.693591 TCTCTCTCTCTCTCTCTCGGTC 59.306 54.545 0.00 0.00 0.00 4.79
3048 10728 1.760613 TCTCTCTCTCTCTCTCGGTCC 59.239 57.143 0.00 0.00 0.00 4.46
3049 10729 0.462375 TCTCTCTCTCTCTCGGTCCG 59.538 60.000 4.39 4.39 0.00 4.79
3050 10730 0.531974 CTCTCTCTCTCTCGGTCCGG 60.532 65.000 12.29 0.00 0.00 5.14
3051 10731 1.525077 CTCTCTCTCTCGGTCCGGG 60.525 68.421 12.29 8.52 0.00 5.73
3052 10732 2.517402 CTCTCTCTCGGTCCGGGG 60.517 72.222 12.24 1.97 0.00 5.73
3053 10733 3.336568 TCTCTCTCGGTCCGGGGT 61.337 66.667 12.24 0.00 0.00 4.95
3054 10734 3.141488 CTCTCTCGGTCCGGGGTG 61.141 72.222 12.24 4.98 0.00 4.61
3055 10735 3.940506 CTCTCTCGGTCCGGGGTGT 62.941 68.421 12.24 0.00 0.00 4.16
3056 10736 3.450115 CTCTCGGTCCGGGGTGTC 61.450 72.222 12.24 0.00 0.00 3.67
3057 10737 3.940506 CTCTCGGTCCGGGGTGTCT 62.941 68.421 12.24 0.00 0.00 3.41
3058 10738 2.044650 CTCGGTCCGGGGTGTCTA 60.045 66.667 12.29 0.00 0.00 2.59
3059 10739 1.455217 CTCGGTCCGGGGTGTCTAT 60.455 63.158 12.29 0.00 0.00 1.98
3060 10740 1.000739 TCGGTCCGGGGTGTCTATT 59.999 57.895 12.29 0.00 0.00 1.73
3061 10741 0.615544 TCGGTCCGGGGTGTCTATTT 60.616 55.000 12.29 0.00 0.00 1.40
3062 10742 0.251073 CGGTCCGGGGTGTCTATTTT 59.749 55.000 2.34 0.00 0.00 1.82
3063 10743 1.746470 GGTCCGGGGTGTCTATTTTG 58.254 55.000 0.00 0.00 0.00 2.44
3064 10744 1.680860 GGTCCGGGGTGTCTATTTTGG 60.681 57.143 0.00 0.00 0.00 3.28
3065 10745 0.621609 TCCGGGGTGTCTATTTTGGG 59.378 55.000 0.00 0.00 0.00 4.12
3148 10829 5.064707 GCCTACACATACCACACATAGTTTG 59.935 44.000 0.00 0.00 0.00 2.93
3196 10877 1.798223 TCGATTCCTTGTGCGAGTTTG 59.202 47.619 0.00 0.00 0.00 2.93
3311 10992 5.769662 TCATTTCTTTGTTGTATGGTGCTCT 59.230 36.000 0.00 0.00 0.00 4.09
3313 10994 5.437289 TTCTTTGTTGTATGGTGCTCTTG 57.563 39.130 0.00 0.00 0.00 3.02
3318 10999 3.244875 TGTTGTATGGTGCTCTTGGATGT 60.245 43.478 0.00 0.00 0.00 3.06
3337 11018 9.814899 TTGGATGTTGCAATTACATATTTTAGG 57.185 29.630 0.59 0.00 36.41 2.69
3339 11020 7.384932 GGATGTTGCAATTACATATTTTAGGCC 59.615 37.037 0.59 0.00 36.41 5.19
3355 11036 8.757164 ATTTTAGGCCAATTTTCTAAGTTTCG 57.243 30.769 5.01 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.632638 TGTACTTCCTCCGTACTAAATATAAGT 57.367 33.333 0.00 0.00 38.39 2.24
12 13 9.851686 TCTTGTACTTCCTCCGTACTAAATATA 57.148 33.333 0.00 0.00 38.39 0.86
13 14 8.757982 TCTTGTACTTCCTCCGTACTAAATAT 57.242 34.615 0.00 0.00 38.39 1.28
14 15 8.049117 TCTCTTGTACTTCCTCCGTACTAAATA 58.951 37.037 0.00 0.00 38.39 1.40
15 16 6.888632 TCTCTTGTACTTCCTCCGTACTAAAT 59.111 38.462 0.00 0.00 38.39 1.40
16 17 6.240894 TCTCTTGTACTTCCTCCGTACTAAA 58.759 40.000 0.00 0.00 38.39 1.85
18 19 5.426504 CTCTCTTGTACTTCCTCCGTACTA 58.573 45.833 0.00 0.00 38.39 1.82
19 20 4.263435 CTCTCTTGTACTTCCTCCGTACT 58.737 47.826 0.00 0.00 38.39 2.73
20 21 3.377798 CCTCTCTTGTACTTCCTCCGTAC 59.622 52.174 0.00 0.00 38.13 3.67
22 23 2.448453 CCTCTCTTGTACTTCCTCCGT 58.552 52.381 0.00 0.00 0.00 4.69
23 24 1.135333 GCCTCTCTTGTACTTCCTCCG 59.865 57.143 0.00 0.00 0.00 4.63
24 25 2.167487 CAGCCTCTCTTGTACTTCCTCC 59.833 54.545 0.00 0.00 0.00 4.30
25 26 2.829120 ACAGCCTCTCTTGTACTTCCTC 59.171 50.000 0.00 0.00 0.00 3.71
26 27 2.896039 ACAGCCTCTCTTGTACTTCCT 58.104 47.619 0.00 0.00 0.00 3.36
27 28 3.330267 CAACAGCCTCTCTTGTACTTCC 58.670 50.000 0.00 0.00 0.00 3.46
28 29 3.244249 ACCAACAGCCTCTCTTGTACTTC 60.244 47.826 0.00 0.00 0.00 3.01
29 30 2.706190 ACCAACAGCCTCTCTTGTACTT 59.294 45.455 0.00 0.00 0.00 2.24
30 31 2.330216 ACCAACAGCCTCTCTTGTACT 58.670 47.619 0.00 0.00 0.00 2.73
31 32 2.841442 ACCAACAGCCTCTCTTGTAC 57.159 50.000 0.00 0.00 0.00 2.90
32 33 3.644265 TGTAACCAACAGCCTCTCTTGTA 59.356 43.478 0.00 0.00 33.01 2.41
33 34 2.438021 TGTAACCAACAGCCTCTCTTGT 59.562 45.455 0.00 0.00 33.01 3.16
35 36 3.857157 TTGTAACCAACAGCCTCTCTT 57.143 42.857 0.00 0.00 39.87 2.85
36 37 4.373156 AATTGTAACCAACAGCCTCTCT 57.627 40.909 0.00 0.00 39.87 3.10
37 38 5.453567 AAAATTGTAACCAACAGCCTCTC 57.546 39.130 0.00 0.00 39.87 3.20
38 39 5.869649 AAAAATTGTAACCAACAGCCTCT 57.130 34.783 0.00 0.00 39.87 3.69
71 72 0.470268 AGAGGCCGGGAGTATTCCTC 60.470 60.000 12.64 12.64 43.49 3.71
72 73 0.760945 CAGAGGCCGGGAGTATTCCT 60.761 60.000 2.18 0.00 43.49 3.36
73 74 1.749033 CAGAGGCCGGGAGTATTCC 59.251 63.158 2.18 0.00 43.23 3.01
76 77 1.460305 ATGCAGAGGCCGGGAGTAT 60.460 57.895 2.18 0.00 40.13 2.12
77 78 2.041922 ATGCAGAGGCCGGGAGTA 60.042 61.111 2.18 0.00 40.13 2.59
78 79 3.474570 GATGCAGAGGCCGGGAGT 61.475 66.667 2.18 0.00 40.13 3.85
79 80 3.160047 AGATGCAGAGGCCGGGAG 61.160 66.667 2.18 0.00 40.13 4.30
80 81 3.473647 CAGATGCAGAGGCCGGGA 61.474 66.667 2.18 0.00 40.13 5.14
81 82 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
83 84 2.202987 GTCCAGATGCAGAGGCCG 60.203 66.667 0.00 0.00 40.13 6.13
84 85 2.037620 ATCGTCCAGATGCAGAGGCC 62.038 60.000 0.00 0.00 38.36 5.19
85 86 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
93 94 1.000163 GACCGTATGCATCGTCCAGAT 60.000 52.381 0.19 0.00 41.01 2.90
94 95 0.384309 GACCGTATGCATCGTCCAGA 59.616 55.000 0.19 0.00 0.00 3.86
96 97 0.533032 TTGACCGTATGCATCGTCCA 59.467 50.000 0.19 4.52 0.00 4.02
97 98 1.865865 ATTGACCGTATGCATCGTCC 58.134 50.000 0.19 2.03 0.00 4.79
99 100 7.485418 TTAATAAATTGACCGTATGCATCGT 57.515 32.000 0.19 0.00 0.00 3.73
100 101 8.948853 AATTAATAAATTGACCGTATGCATCG 57.051 30.769 0.19 7.03 33.97 3.84
125 126 7.927629 ACGACTTTGTAAGGTCTTGTGTTAATA 59.072 33.333 5.52 0.00 0.00 0.98
126 127 6.764560 ACGACTTTGTAAGGTCTTGTGTTAAT 59.235 34.615 5.52 0.00 0.00 1.40
127 128 6.108015 ACGACTTTGTAAGGTCTTGTGTTAA 58.892 36.000 5.52 0.00 0.00 2.01
128 129 5.663456 ACGACTTTGTAAGGTCTTGTGTTA 58.337 37.500 5.52 0.00 0.00 2.41
129 130 4.510571 ACGACTTTGTAAGGTCTTGTGTT 58.489 39.130 5.52 0.00 0.00 3.32
133 134 5.521010 TGTTGTACGACTTTGTAAGGTCTTG 59.479 40.000 14.38 0.00 0.00 3.02
135 136 5.266733 TGTTGTACGACTTTGTAAGGTCT 57.733 39.130 14.38 0.00 0.00 3.85
136 137 5.971895 TTGTTGTACGACTTTGTAAGGTC 57.028 39.130 14.38 0.00 0.00 3.85
137 138 7.927629 TCTTATTGTTGTACGACTTTGTAAGGT 59.072 33.333 14.38 0.00 0.00 3.50
138 139 8.219105 GTCTTATTGTTGTACGACTTTGTAAGG 58.781 37.037 14.38 0.00 0.00 2.69
139 140 8.219105 GGTCTTATTGTTGTACGACTTTGTAAG 58.781 37.037 14.38 14.49 0.00 2.34
140 141 7.710044 TGGTCTTATTGTTGTACGACTTTGTAA 59.290 33.333 14.38 0.43 0.00 2.41
143 144 6.533819 TGGTCTTATTGTTGTACGACTTTG 57.466 37.500 14.38 1.42 0.00 2.77
144 145 7.281549 ACTTTGGTCTTATTGTTGTACGACTTT 59.718 33.333 14.38 4.56 0.00 2.66
145 146 6.764560 ACTTTGGTCTTATTGTTGTACGACTT 59.235 34.615 14.38 4.89 0.00 3.01
146 147 6.285990 ACTTTGGTCTTATTGTTGTACGACT 58.714 36.000 14.38 0.00 0.00 4.18
147 148 6.201425 TGACTTTGGTCTTATTGTTGTACGAC 59.799 38.462 6.27 6.27 42.54 4.34
149 150 6.360329 GTGACTTTGGTCTTATTGTTGTACG 58.640 40.000 0.00 0.00 42.54 3.67
150 151 6.565247 CGGTGACTTTGGTCTTATTGTTGTAC 60.565 42.308 0.00 0.00 42.54 2.90
152 153 4.274950 CGGTGACTTTGGTCTTATTGTTGT 59.725 41.667 0.00 0.00 42.54 3.32
153 154 4.274950 ACGGTGACTTTGGTCTTATTGTTG 59.725 41.667 0.00 0.00 42.54 3.33
154 155 4.457466 ACGGTGACTTTGGTCTTATTGTT 58.543 39.130 0.00 0.00 42.54 2.83
155 156 4.062991 GACGGTGACTTTGGTCTTATTGT 58.937 43.478 0.00 0.00 42.54 2.71
156 157 4.152402 CAGACGGTGACTTTGGTCTTATTG 59.848 45.833 0.00 0.00 42.54 1.90
157 158 4.039973 TCAGACGGTGACTTTGGTCTTATT 59.960 41.667 0.00 0.00 42.54 1.40
159 160 2.960384 TCAGACGGTGACTTTGGTCTTA 59.040 45.455 0.00 0.00 42.54 2.10
160 161 1.760613 TCAGACGGTGACTTTGGTCTT 59.239 47.619 0.00 0.00 42.54 3.01
161 162 1.341531 CTCAGACGGTGACTTTGGTCT 59.658 52.381 0.00 0.00 42.54 3.85
162 163 1.784525 CTCAGACGGTGACTTTGGTC 58.215 55.000 0.00 0.00 42.42 4.02
163 164 0.249911 GCTCAGACGGTGACTTTGGT 60.250 55.000 0.00 0.00 0.00 3.67
164 165 0.249868 TGCTCAGACGGTGACTTTGG 60.250 55.000 0.00 0.00 0.00 3.28
166 167 1.583054 GTTGCTCAGACGGTGACTTT 58.417 50.000 0.00 0.00 0.00 2.66
167 168 0.249911 GGTTGCTCAGACGGTGACTT 60.250 55.000 0.00 0.00 0.00 3.01
168 169 1.115930 AGGTTGCTCAGACGGTGACT 61.116 55.000 0.00 0.00 0.00 3.41
171 172 0.668706 CAGAGGTTGCTCAGACGGTG 60.669 60.000 0.00 0.00 0.00 4.94
172 173 1.115930 ACAGAGGTTGCTCAGACGGT 61.116 55.000 0.00 0.00 0.00 4.83
173 174 0.389166 GACAGAGGTTGCTCAGACGG 60.389 60.000 0.00 0.00 0.00 4.79
174 175 0.730834 CGACAGAGGTTGCTCAGACG 60.731 60.000 0.00 0.00 0.00 4.18
182 183 1.178276 AGGAGTAGCGACAGAGGTTG 58.822 55.000 0.00 0.00 0.00 3.77
183 184 2.803030 TAGGAGTAGCGACAGAGGTT 57.197 50.000 0.00 0.00 0.00 3.50
184 185 2.440253 AGATAGGAGTAGCGACAGAGGT 59.560 50.000 0.00 0.00 0.00 3.85
185 186 3.134574 AGATAGGAGTAGCGACAGAGG 57.865 52.381 0.00 0.00 0.00 3.69
187 188 3.325425 AGCTAGATAGGAGTAGCGACAGA 59.675 47.826 0.00 0.00 45.35 3.41
188 189 3.435327 CAGCTAGATAGGAGTAGCGACAG 59.565 52.174 0.00 0.00 45.35 3.51
189 190 3.071167 TCAGCTAGATAGGAGTAGCGACA 59.929 47.826 0.00 0.00 45.35 4.35
190 191 3.666274 TCAGCTAGATAGGAGTAGCGAC 58.334 50.000 0.00 0.00 45.35 5.19
191 192 4.020128 TCATCAGCTAGATAGGAGTAGCGA 60.020 45.833 0.00 0.00 45.35 4.93
192 193 4.257731 TCATCAGCTAGATAGGAGTAGCG 58.742 47.826 0.00 0.00 45.35 4.26
193 194 5.125417 CCTTCATCAGCTAGATAGGAGTAGC 59.875 48.000 0.00 0.00 41.77 3.58
195 196 5.517477 CCCCTTCATCAGCTAGATAGGAGTA 60.517 48.000 12.77 0.00 35.35 2.59
197 198 3.768757 CCCCTTCATCAGCTAGATAGGAG 59.231 52.174 12.77 6.68 35.35 3.69
198 199 3.784178 CCCCTTCATCAGCTAGATAGGA 58.216 50.000 12.77 0.00 35.35 2.94
199 200 2.235898 GCCCCTTCATCAGCTAGATAGG 59.764 54.545 0.00 0.00 34.43 2.57
200 201 2.094286 CGCCCCTTCATCAGCTAGATAG 60.094 54.545 0.00 0.00 34.43 2.08
201 202 1.895798 CGCCCCTTCATCAGCTAGATA 59.104 52.381 0.00 0.00 34.43 1.98
202 203 0.683973 CGCCCCTTCATCAGCTAGAT 59.316 55.000 0.00 0.00 37.48 1.98
203 204 2.032860 GCGCCCCTTCATCAGCTAGA 62.033 60.000 0.00 0.00 0.00 2.43
204 205 1.596477 GCGCCCCTTCATCAGCTAG 60.596 63.158 0.00 0.00 0.00 3.42
205 206 2.066393 AGCGCCCCTTCATCAGCTA 61.066 57.895 2.29 0.00 32.73 3.32
207 208 2.955022 ATCAGCGCCCCTTCATCAGC 62.955 60.000 2.29 0.00 0.00 4.26
208 209 1.147824 ATCAGCGCCCCTTCATCAG 59.852 57.895 2.29 0.00 0.00 2.90
209 210 1.153107 CATCAGCGCCCCTTCATCA 60.153 57.895 2.29 0.00 0.00 3.07
210 211 1.895707 CCATCAGCGCCCCTTCATC 60.896 63.158 2.29 0.00 0.00 2.92
213 214 2.514824 GACCATCAGCGCCCCTTC 60.515 66.667 2.29 0.00 0.00 3.46
214 215 3.011517 AGACCATCAGCGCCCCTT 61.012 61.111 2.29 0.00 0.00 3.95
216 217 4.864334 CCAGACCATCAGCGCCCC 62.864 72.222 2.29 0.00 0.00 5.80
217 218 4.864334 CCCAGACCATCAGCGCCC 62.864 72.222 2.29 0.00 0.00 6.13
220 221 1.971505 TTAGGCCCAGACCATCAGCG 61.972 60.000 0.00 0.00 0.00 5.18
221 222 0.475906 ATTAGGCCCAGACCATCAGC 59.524 55.000 0.00 0.00 0.00 4.26
222 223 2.039084 GGTATTAGGCCCAGACCATCAG 59.961 54.545 10.84 0.00 0.00 2.90
223 224 2.054799 GGTATTAGGCCCAGACCATCA 58.945 52.381 10.84 0.00 0.00 3.07
225 226 2.206322 TGGTATTAGGCCCAGACCAT 57.794 50.000 13.86 0.00 35.26 3.55
227 228 2.025699 TGTTTGGTATTAGGCCCAGACC 60.026 50.000 9.08 9.08 35.53 3.85
228 229 3.054655 TCTGTTTGGTATTAGGCCCAGAC 60.055 47.826 0.00 0.00 36.61 3.51
231 232 2.025699 GGTCTGTTTGGTATTAGGCCCA 60.026 50.000 0.00 0.00 0.00 5.36
232 233 2.241430 AGGTCTGTTTGGTATTAGGCCC 59.759 50.000 0.00 0.00 35.54 5.80
233 234 3.542648 GAGGTCTGTTTGGTATTAGGCC 58.457 50.000 0.00 0.00 35.18 5.19
234 235 3.195661 CGAGGTCTGTTTGGTATTAGGC 58.804 50.000 0.00 0.00 0.00 3.93
235 236 3.195661 GCGAGGTCTGTTTGGTATTAGG 58.804 50.000 0.00 0.00 0.00 2.69
236 237 3.857052 TGCGAGGTCTGTTTGGTATTAG 58.143 45.455 0.00 0.00 0.00 1.73
237 238 3.259876 ACTGCGAGGTCTGTTTGGTATTA 59.740 43.478 0.00 0.00 0.00 0.98
238 239 2.038557 ACTGCGAGGTCTGTTTGGTATT 59.961 45.455 0.00 0.00 0.00 1.89
239 240 1.623811 ACTGCGAGGTCTGTTTGGTAT 59.376 47.619 0.00 0.00 0.00 2.73
240 241 1.000506 GACTGCGAGGTCTGTTTGGTA 59.999 52.381 0.00 0.00 33.81 3.25
244 245 1.940613 GTTTGACTGCGAGGTCTGTTT 59.059 47.619 9.06 0.00 37.16 2.83
245 246 1.583054 GTTTGACTGCGAGGTCTGTT 58.417 50.000 9.06 0.00 37.16 3.16
246 247 0.249911 GGTTTGACTGCGAGGTCTGT 60.250 55.000 9.06 0.00 37.16 3.41
247 248 0.034059 AGGTTTGACTGCGAGGTCTG 59.966 55.000 9.06 0.00 37.16 3.51
248 249 1.629043 TAGGTTTGACTGCGAGGTCT 58.371 50.000 9.06 0.00 37.16 3.85
249 250 2.067013 GTTAGGTTTGACTGCGAGGTC 58.933 52.381 0.00 0.00 36.81 3.85
250 251 1.414919 TGTTAGGTTTGACTGCGAGGT 59.585 47.619 0.00 0.00 0.00 3.85
251 252 2.163818 TGTTAGGTTTGACTGCGAGG 57.836 50.000 0.00 0.00 0.00 4.63
252 253 3.589988 AGATGTTAGGTTTGACTGCGAG 58.410 45.455 0.00 0.00 0.00 5.03
253 254 3.678056 AGATGTTAGGTTTGACTGCGA 57.322 42.857 0.00 0.00 0.00 5.10
254 255 5.062308 GTCTTAGATGTTAGGTTTGACTGCG 59.938 44.000 0.00 0.00 0.00 5.18
256 257 6.702329 AGGTCTTAGATGTTAGGTTTGACTG 58.298 40.000 0.00 0.00 0.00 3.51
257 258 6.936968 AGGTCTTAGATGTTAGGTTTGACT 57.063 37.500 0.00 0.00 0.00 3.41
260 261 9.535878 GATCTTAGGTCTTAGATGTTAGGTTTG 57.464 37.037 4.48 0.00 31.46 2.93
261 262 8.706521 GGATCTTAGGTCTTAGATGTTAGGTTT 58.293 37.037 4.48 0.00 31.46 3.27
262 263 7.290481 GGGATCTTAGGTCTTAGATGTTAGGTT 59.710 40.741 4.48 0.00 31.46 3.50
264 265 6.782988 TGGGATCTTAGGTCTTAGATGTTAGG 59.217 42.308 4.48 0.00 31.46 2.69
265 266 7.841282 TGGGATCTTAGGTCTTAGATGTTAG 57.159 40.000 4.48 0.00 31.46 2.34
266 267 7.070821 GGTTGGGATCTTAGGTCTTAGATGTTA 59.929 40.741 4.48 0.00 31.46 2.41
268 269 5.367060 GGTTGGGATCTTAGGTCTTAGATGT 59.633 44.000 4.48 0.00 31.46 3.06
269 270 5.366768 TGGTTGGGATCTTAGGTCTTAGATG 59.633 44.000 4.48 0.00 31.46 2.90
270 271 5.538877 TGGTTGGGATCTTAGGTCTTAGAT 58.461 41.667 0.00 0.00 33.92 1.98
272 273 5.693769 TTGGTTGGGATCTTAGGTCTTAG 57.306 43.478 0.00 0.00 0.00 2.18
273 274 6.243148 GTTTTGGTTGGGATCTTAGGTCTTA 58.757 40.000 0.00 0.00 0.00 2.10
274 275 5.077564 GTTTTGGTTGGGATCTTAGGTCTT 58.922 41.667 0.00 0.00 0.00 3.01
276 277 3.439129 CGTTTTGGTTGGGATCTTAGGTC 59.561 47.826 0.00 0.00 0.00 3.85
277 278 3.181437 ACGTTTTGGTTGGGATCTTAGGT 60.181 43.478 0.00 0.00 0.00 3.08
278 279 3.418047 ACGTTTTGGTTGGGATCTTAGG 58.582 45.455 0.00 0.00 0.00 2.69
279 280 4.154195 CAGACGTTTTGGTTGGGATCTTAG 59.846 45.833 0.00 0.00 0.00 2.18
282 283 2.504367 CAGACGTTTTGGTTGGGATCT 58.496 47.619 0.00 0.00 0.00 2.75
283 284 1.068541 GCAGACGTTTTGGTTGGGATC 60.069 52.381 0.00 0.00 0.00 3.36
284 285 0.958822 GCAGACGTTTTGGTTGGGAT 59.041 50.000 0.00 0.00 0.00 3.85
285 286 1.104577 GGCAGACGTTTTGGTTGGGA 61.105 55.000 0.00 0.00 0.00 4.37
286 287 1.362355 GGCAGACGTTTTGGTTGGG 59.638 57.895 0.00 0.00 0.00 4.12
287 288 1.008995 CGGCAGACGTTTTGGTTGG 60.009 57.895 0.00 0.00 37.93 3.77
289 290 0.179051 TACCGGCAGACGTTTTGGTT 60.179 50.000 0.00 0.00 42.24 3.67
290 291 0.035739 ATACCGGCAGACGTTTTGGT 59.964 50.000 0.00 0.00 42.24 3.67
291 292 0.446222 CATACCGGCAGACGTTTTGG 59.554 55.000 0.00 0.00 42.24 3.28
292 293 0.446222 CCATACCGGCAGACGTTTTG 59.554 55.000 0.00 0.00 42.24 2.44
294 295 1.078708 CCCATACCGGCAGACGTTT 60.079 57.895 0.00 0.00 42.24 3.60
295 296 2.582436 CCCATACCGGCAGACGTT 59.418 61.111 0.00 0.00 42.24 3.99
303 304 2.113139 GGTGGATGCCCATACCGG 59.887 66.667 0.00 0.00 45.68 5.28
304 305 1.227943 CTGGTGGATGCCCATACCG 60.228 63.158 0.00 0.00 45.68 4.02
305 306 0.179018 GACTGGTGGATGCCCATACC 60.179 60.000 0.00 0.00 45.68 2.73
306 307 0.532862 CGACTGGTGGATGCCCATAC 60.533 60.000 0.00 0.00 45.68 2.39
307 308 1.695114 CCGACTGGTGGATGCCCATA 61.695 60.000 0.00 0.00 45.68 2.74
308 309 2.591753 CGACTGGTGGATGCCCAT 59.408 61.111 0.00 0.00 45.68 4.00
310 311 4.489771 CCCGACTGGTGGATGCCC 62.490 72.222 0.00 0.00 0.00 5.36
320 321 4.803426 GAGGAGCACGCCCGACTG 62.803 72.222 0.00 0.00 0.00 3.51
322 323 3.665675 ATTGAGGAGCACGCCCGAC 62.666 63.158 0.00 0.00 0.00 4.79
323 324 3.371097 GATTGAGGAGCACGCCCGA 62.371 63.158 0.00 0.00 0.00 5.14
324 325 2.892425 GATTGAGGAGCACGCCCG 60.892 66.667 0.00 0.00 0.00 6.13
325 326 1.817099 CTGATTGAGGAGCACGCCC 60.817 63.158 0.00 0.00 0.00 6.13
326 327 1.817099 CCTGATTGAGGAGCACGCC 60.817 63.158 0.00 0.00 46.33 5.68
327 328 1.219124 TCCTGATTGAGGAGCACGC 59.781 57.895 0.00 0.00 46.96 5.34
334 335 1.468224 CGACAGACGTCCTGATTGAGG 60.468 57.143 13.01 0.00 45.78 3.86
335 336 1.468224 CCGACAGACGTCCTGATTGAG 60.468 57.143 13.01 3.86 45.78 3.02
336 337 0.526211 CCGACAGACGTCCTGATTGA 59.474 55.000 13.01 0.00 45.78 2.57
337 338 0.458543 CCCGACAGACGTCCTGATTG 60.459 60.000 13.01 6.04 45.78 2.67
338 339 0.898789 ACCCGACAGACGTCCTGATT 60.899 55.000 13.01 0.00 45.78 2.57
340 341 0.034767 ATACCCGACAGACGTCCTGA 60.035 55.000 13.01 0.00 45.78 3.86
342 343 0.034767 TCATACCCGACAGACGTCCT 60.035 55.000 13.01 0.00 39.11 3.85
343 344 0.381089 CTCATACCCGACAGACGTCC 59.619 60.000 13.01 0.00 39.11 4.79
344 345 1.063764 GTCTCATACCCGACAGACGTC 59.936 57.143 7.70 7.70 40.78 4.34
345 346 1.093159 GTCTCATACCCGACAGACGT 58.907 55.000 0.00 0.00 40.78 4.34
346 347 0.381089 GGTCTCATACCCGACAGACG 59.619 60.000 0.00 0.00 43.16 4.18
347 348 0.381089 CGGTCTCATACCCGACAGAC 59.619 60.000 0.00 0.00 46.62 3.51
350 351 3.203442 GCGGTCTCATACCCGACA 58.797 61.111 1.70 0.00 46.62 4.35
352 353 2.043752 TGGCGGTCTCATACCCGA 60.044 61.111 1.70 0.00 46.62 5.14
353 354 2.106332 GTGGCGGTCTCATACCCG 59.894 66.667 0.00 0.00 46.62 5.28
354 355 1.144057 CTGTGGCGGTCTCATACCC 59.856 63.158 0.00 0.00 46.62 3.69
356 357 0.391130 TTGCTGTGGCGGTCTCATAC 60.391 55.000 0.00 0.00 42.25 2.39
359 360 2.280797 GTTGCTGTGGCGGTCTCA 60.281 61.111 0.00 0.00 42.25 3.27
360 361 3.050275 GGTTGCTGTGGCGGTCTC 61.050 66.667 0.00 0.00 42.25 3.36
362 363 3.357079 CAGGTTGCTGTGGCGGTC 61.357 66.667 0.00 0.00 42.25 4.79
363 364 4.189580 ACAGGTTGCTGTGGCGGT 62.190 61.111 0.00 0.00 42.25 5.68
365 366 2.591429 TGACAGGTTGCTGTGGCG 60.591 61.111 0.00 0.00 42.25 5.69
366 367 1.174712 ATGTGACAGGTTGCTGTGGC 61.175 55.000 0.00 0.00 37.74 5.01
367 368 2.183478 TATGTGACAGGTTGCTGTGG 57.817 50.000 0.00 0.00 37.74 4.17
368 369 2.679837 GGATATGTGACAGGTTGCTGTG 59.320 50.000 0.00 0.00 37.74 3.66
369 370 2.305635 TGGATATGTGACAGGTTGCTGT 59.694 45.455 0.00 0.00 40.72 4.40
371 372 3.457380 AGATGGATATGTGACAGGTTGCT 59.543 43.478 0.00 0.00 0.00 3.91
372 373 3.813443 AGATGGATATGTGACAGGTTGC 58.187 45.455 0.00 0.00 0.00 4.17
373 374 7.864108 TTTAAGATGGATATGTGACAGGTTG 57.136 36.000 0.00 0.00 0.00 3.77
374 375 8.877864 TTTTTAAGATGGATATGTGACAGGTT 57.122 30.769 0.00 0.00 0.00 3.50
375 376 9.125026 GATTTTTAAGATGGATATGTGACAGGT 57.875 33.333 0.00 0.00 0.00 4.00
376 377 9.347240 AGATTTTTAAGATGGATATGTGACAGG 57.653 33.333 0.00 0.00 0.00 4.00
384 385 9.294614 GCCTCAGAAGATTTTTAAGATGGATAT 57.705 33.333 0.00 0.00 0.00 1.63
385 386 8.497745 AGCCTCAGAAGATTTTTAAGATGGATA 58.502 33.333 0.00 0.00 0.00 2.59
386 387 7.284944 CAGCCTCAGAAGATTTTTAAGATGGAT 59.715 37.037 0.00 0.00 0.00 3.41
387 388 6.600822 CAGCCTCAGAAGATTTTTAAGATGGA 59.399 38.462 0.00 0.00 0.00 3.41
388 389 6.376581 ACAGCCTCAGAAGATTTTTAAGATGG 59.623 38.462 0.00 0.00 0.00 3.51
389 390 7.388460 ACAGCCTCAGAAGATTTTTAAGATG 57.612 36.000 0.00 0.00 0.00 2.90
390 391 7.094032 CCAACAGCCTCAGAAGATTTTTAAGAT 60.094 37.037 0.00 0.00 0.00 2.40
391 392 6.207417 CCAACAGCCTCAGAAGATTTTTAAGA 59.793 38.462 0.00 0.00 0.00 2.10
392 393 6.385033 CCAACAGCCTCAGAAGATTTTTAAG 58.615 40.000 0.00 0.00 0.00 1.85
393 394 5.243730 CCCAACAGCCTCAGAAGATTTTTAA 59.756 40.000 0.00 0.00 0.00 1.52
394 395 4.766891 CCCAACAGCCTCAGAAGATTTTTA 59.233 41.667 0.00 0.00 0.00 1.52
395 396 3.575687 CCCAACAGCCTCAGAAGATTTTT 59.424 43.478 0.00 0.00 0.00 1.94
396 397 3.160269 CCCAACAGCCTCAGAAGATTTT 58.840 45.455 0.00 0.00 0.00 1.82
397 398 2.108952 ACCCAACAGCCTCAGAAGATTT 59.891 45.455 0.00 0.00 0.00 2.17
398 399 1.707427 ACCCAACAGCCTCAGAAGATT 59.293 47.619 0.00 0.00 0.00 2.40
399 400 1.280421 GACCCAACAGCCTCAGAAGAT 59.720 52.381 0.00 0.00 0.00 2.40
400 401 0.687354 GACCCAACAGCCTCAGAAGA 59.313 55.000 0.00 0.00 0.00 2.87
401 402 0.322008 GGACCCAACAGCCTCAGAAG 60.322 60.000 0.00 0.00 0.00 2.85
402 403 1.059584 TGGACCCAACAGCCTCAGAA 61.060 55.000 0.00 0.00 0.00 3.02
403 404 0.842030 ATGGACCCAACAGCCTCAGA 60.842 55.000 0.00 0.00 0.00 3.27
404 405 0.911769 TATGGACCCAACAGCCTCAG 59.088 55.000 0.00 0.00 0.00 3.35
405 406 0.911769 CTATGGACCCAACAGCCTCA 59.088 55.000 0.00 0.00 0.00 3.86
406 407 0.912486 ACTATGGACCCAACAGCCTC 59.088 55.000 0.00 0.00 0.00 4.70
407 408 0.912486 GACTATGGACCCAACAGCCT 59.088 55.000 0.00 0.00 0.00 4.58
408 409 0.618458 TGACTATGGACCCAACAGCC 59.382 55.000 0.00 0.00 0.00 4.85
409 410 1.407437 CCTGACTATGGACCCAACAGC 60.407 57.143 0.00 0.00 0.00 4.40
410 411 1.210478 CCCTGACTATGGACCCAACAG 59.790 57.143 0.00 0.00 0.00 3.16
411 412 1.203376 TCCCTGACTATGGACCCAACA 60.203 52.381 0.00 0.00 0.00 3.33
412 413 1.580059 TCCCTGACTATGGACCCAAC 58.420 55.000 0.00 0.00 0.00 3.77
413 414 2.196595 CTTCCCTGACTATGGACCCAA 58.803 52.381 0.00 0.00 0.00 4.12
414 415 1.879575 CTTCCCTGACTATGGACCCA 58.120 55.000 0.00 0.00 0.00 4.51
415 416 0.470341 GCTTCCCTGACTATGGACCC 59.530 60.000 0.00 0.00 0.00 4.46
416 417 0.105039 CGCTTCCCTGACTATGGACC 59.895 60.000 0.00 0.00 0.00 4.46
417 418 0.105039 CCGCTTCCCTGACTATGGAC 59.895 60.000 0.00 0.00 0.00 4.02
418 419 0.032515 TCCGCTTCCCTGACTATGGA 60.033 55.000 0.00 0.00 0.00 3.41
419 420 0.390860 CTCCGCTTCCCTGACTATGG 59.609 60.000 0.00 0.00 0.00 2.74
420 421 0.249657 GCTCCGCTTCCCTGACTATG 60.250 60.000 0.00 0.00 0.00 2.23
421 422 0.687757 TGCTCCGCTTCCCTGACTAT 60.688 55.000 0.00 0.00 0.00 2.12
422 423 0.687757 ATGCTCCGCTTCCCTGACTA 60.688 55.000 0.00 0.00 0.00 2.59
423 424 1.992277 ATGCTCCGCTTCCCTGACT 60.992 57.895 0.00 0.00 0.00 3.41
424 425 1.817099 CATGCTCCGCTTCCCTGAC 60.817 63.158 0.00 0.00 0.00 3.51
425 426 2.586245 CATGCTCCGCTTCCCTGA 59.414 61.111 0.00 0.00 0.00 3.86
426 427 3.207669 GCATGCTCCGCTTCCCTG 61.208 66.667 11.37 0.00 0.00 4.45
427 428 3.406200 AGCATGCTCCGCTTCCCT 61.406 61.111 16.30 0.00 35.82 4.20
428 429 3.207669 CAGCATGCTCCGCTTCCC 61.208 66.667 19.68 0.00 37.72 3.97
429 430 2.124983 TCAGCATGCTCCGCTTCC 60.125 61.111 19.68 0.00 37.72 3.46
430 431 2.467826 GGTCAGCATGCTCCGCTTC 61.468 63.158 19.68 4.62 37.72 3.86
431 432 2.437359 GGTCAGCATGCTCCGCTT 60.437 61.111 19.68 0.00 37.72 4.68
432 433 3.040206 ATGGTCAGCATGCTCCGCT 62.040 57.895 19.68 5.89 41.47 5.52
433 434 2.515523 ATGGTCAGCATGCTCCGC 60.516 61.111 19.68 10.61 34.76 5.54
434 435 1.153309 TCATGGTCAGCATGCTCCG 60.153 57.895 19.68 8.12 34.76 4.63
435 436 1.099879 GGTCATGGTCAGCATGCTCC 61.100 60.000 19.68 17.91 34.76 4.70
436 437 0.393402 TGGTCATGGTCAGCATGCTC 60.393 55.000 19.68 7.65 34.76 4.26
437 438 0.257905 ATGGTCATGGTCAGCATGCT 59.742 50.000 16.30 16.30 34.76 3.79
438 439 0.384309 CATGGTCATGGTCAGCATGC 59.616 55.000 12.24 10.51 41.47 4.06
439 440 1.674441 GTCATGGTCATGGTCAGCATG 59.326 52.381 10.80 10.80 46.62 4.06
440 441 1.409241 GGTCATGGTCATGGTCAGCAT 60.409 52.381 10.61 0.00 39.24 3.79
441 442 0.035152 GGTCATGGTCATGGTCAGCA 60.035 55.000 10.61 0.00 39.24 4.41
442 443 0.035152 TGGTCATGGTCATGGTCAGC 60.035 55.000 10.61 3.02 39.24 4.26
443 444 2.294979 CATGGTCATGGTCATGGTCAG 58.705 52.381 16.35 2.31 39.24 3.51
444 445 1.634973 ACATGGTCATGGTCATGGTCA 59.365 47.619 23.27 9.45 43.49 4.02
445 446 2.425143 ACATGGTCATGGTCATGGTC 57.575 50.000 23.27 5.21 43.49 4.02
446 447 2.905415 AACATGGTCATGGTCATGGT 57.095 45.000 23.27 18.21 43.49 3.55
477 478 5.057819 GGCTTCCTTAGATTTAGCAGGTAC 58.942 45.833 0.00 0.00 33.60 3.34
478 479 4.719773 TGGCTTCCTTAGATTTAGCAGGTA 59.280 41.667 0.00 0.00 33.60 3.08
479 480 3.523564 TGGCTTCCTTAGATTTAGCAGGT 59.476 43.478 0.00 0.00 33.60 4.00
480 481 4.156455 TGGCTTCCTTAGATTTAGCAGG 57.844 45.455 0.00 0.00 33.60 4.85
494 498 3.701040 TGGCTTCATTAGATTTGGCTTCC 59.299 43.478 0.00 0.00 0.00 3.46
555 559 9.191479 TGTGTTAAATCCCCGATTATTATTGTT 57.809 29.630 0.00 0.00 31.46 2.83
556 560 8.754991 TGTGTTAAATCCCCGATTATTATTGT 57.245 30.769 0.00 0.00 31.46 2.71
557 561 9.624697 CATGTGTTAAATCCCCGATTATTATTG 57.375 33.333 0.00 0.00 31.46 1.90
558 562 8.802267 CCATGTGTTAAATCCCCGATTATTATT 58.198 33.333 0.00 0.00 31.46 1.40
559 563 7.396055 CCCATGTGTTAAATCCCCGATTATTAT 59.604 37.037 0.00 0.00 31.46 1.28
560 564 6.717540 CCCATGTGTTAAATCCCCGATTATTA 59.282 38.462 0.00 0.00 31.46 0.98
601 605 2.947938 ATTGGATTCGGCCGGCAGAG 62.948 60.000 30.85 18.98 0.00 3.35
611 800 1.296867 GCACGCGTCATTGGATTCG 60.297 57.895 9.86 0.00 0.00 3.34
649 838 3.915437 TTCAAGAAAAATCAGCGGGAC 57.085 42.857 0.00 0.00 0.00 4.46
655 844 6.698329 TGTGCTCACATTTCAAGAAAAATCAG 59.302 34.615 0.00 0.00 36.21 2.90
676 887 1.296056 GGTCCACATGTACCGTGTGC 61.296 60.000 18.18 9.13 46.41 4.57
725 945 5.798125 TCACAAATATGGAACCAAAGCAA 57.202 34.783 0.00 0.00 0.00 3.91
749 969 4.627058 ACTTTTTGGAACTAAAATGGCCG 58.373 39.130 0.00 0.00 32.24 6.13
760 980 2.588027 TCCGGCAAACTTTTTGGAAC 57.412 45.000 0.00 0.00 0.00 3.62
821 2045 5.449297 TTGATGAATTCCTGGGTGTGATA 57.551 39.130 2.27 0.00 0.00 2.15
830 2054 7.104043 TCATAAGCCTTTTGATGAATTCCTG 57.896 36.000 2.27 0.00 0.00 3.86
855 2080 5.241728 CCATTCTTCGGGTTTCTTCTTCTTT 59.758 40.000 0.00 0.00 0.00 2.52
864 2089 2.235891 ACCAACCATTCTTCGGGTTTC 58.764 47.619 0.00 0.00 44.78 2.78
912 2139 3.435327 TGTGCCTTTATAGCAACGACAAG 59.565 43.478 0.00 0.00 43.02 3.16
950 2177 2.233271 CCCTGCACTTCACTGAACAAT 58.767 47.619 0.00 0.00 0.00 2.71
985 2226 2.608268 CTCCATATGCTCTGCTCGATG 58.392 52.381 0.00 0.00 0.00 3.84
1149 2428 4.864334 GTGATGGCCGCCTGGAGG 62.864 72.222 12.67 12.67 37.49 4.30
1812 3102 2.227388 CACGTCGTAGTCCAGGTACTTT 59.773 50.000 0.00 0.00 34.60 2.66
1842 3132 1.444553 CTTCACCGACGTCAGCTCC 60.445 63.158 17.16 0.00 0.00 4.70
1920 3210 1.323271 GGGAGCAGTCGATGTCCTCA 61.323 60.000 0.00 0.00 32.66 3.86
1978 3268 4.556302 GCTCTTGCTCTTCTTCTTGTTTGG 60.556 45.833 0.00 0.00 36.03 3.28
1982 3272 2.411904 CGCTCTTGCTCTTCTTCTTGT 58.588 47.619 0.00 0.00 36.97 3.16
2464 10079 0.385751 TCCTCGTCATCATCTTCGGC 59.614 55.000 0.00 0.00 0.00 5.54
2578 10217 5.126545 TGCCTTCATACATACGAGTACTTGT 59.873 40.000 19.62 19.62 0.00 3.16
2579 10218 5.588240 TGCCTTCATACATACGAGTACTTG 58.412 41.667 8.69 8.69 0.00 3.16
2586 10225 7.497595 AGTTCTTATTGCCTTCATACATACGA 58.502 34.615 0.00 0.00 0.00 3.43
2587 10226 7.715265 AGTTCTTATTGCCTTCATACATACG 57.285 36.000 0.00 0.00 0.00 3.06
2690 10369 2.774439 ACAAGTGGACGCATTTTGTC 57.226 45.000 0.00 0.00 35.60 3.18
2889 10569 6.935167 AGGGTGGTTTATTAAGCAGAATTTG 58.065 36.000 0.00 0.00 42.00 2.32
2897 10577 2.289820 GCGCTAGGGTGGTTTATTAAGC 59.710 50.000 8.77 0.00 0.00 3.09
2977 10657 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2985 10665 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2987 10667 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2988 10668 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2989 10669 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2990 10670 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2991 10671 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2992 10672 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2993 10673 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2995 10675 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2996 10676 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2997 10677 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2998 10678 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2999 10679 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3000 10680 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3001 10681 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3002 10682 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3003 10683 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3004 10684 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3005 10685 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3006 10686 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3007 10687 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3008 10688 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3009 10689 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3010 10690 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3011 10691 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3012 10692 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3013 10693 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3014 10694 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3015 10695 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3016 10696 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3017 10697 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3018 10698 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
3019 10699 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
3020 10700 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
3021 10701 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
3022 10702 3.885901 CGAGAGAGAGAGAGAGAGAGAGA 59.114 52.174 0.00 0.00 0.00 3.10
3023 10703 3.005261 CCGAGAGAGAGAGAGAGAGAGAG 59.995 56.522 0.00 0.00 0.00 3.20
3024 10704 2.959030 CCGAGAGAGAGAGAGAGAGAGA 59.041 54.545 0.00 0.00 0.00 3.10
3025 10705 2.695666 ACCGAGAGAGAGAGAGAGAGAG 59.304 54.545 0.00 0.00 0.00 3.20
3026 10706 2.693591 GACCGAGAGAGAGAGAGAGAGA 59.306 54.545 0.00 0.00 0.00 3.10
3027 10707 2.224066 GGACCGAGAGAGAGAGAGAGAG 60.224 59.091 0.00 0.00 0.00 3.20
3028 10708 1.760613 GGACCGAGAGAGAGAGAGAGA 59.239 57.143 0.00 0.00 0.00 3.10
3029 10709 1.538204 CGGACCGAGAGAGAGAGAGAG 60.538 61.905 8.64 0.00 0.00 3.20
3030 10710 0.462375 CGGACCGAGAGAGAGAGAGA 59.538 60.000 8.64 0.00 0.00 3.10
3031 10711 0.531974 CCGGACCGAGAGAGAGAGAG 60.532 65.000 17.49 0.00 0.00 3.20
3032 10712 1.523046 CCGGACCGAGAGAGAGAGA 59.477 63.158 17.49 0.00 0.00 3.10
3033 10713 1.525077 CCCGGACCGAGAGAGAGAG 60.525 68.421 17.49 0.00 0.00 3.20
3034 10714 2.590645 CCCGGACCGAGAGAGAGA 59.409 66.667 17.49 0.00 0.00 3.10
3035 10715 2.517402 CCCCGGACCGAGAGAGAG 60.517 72.222 17.49 0.00 0.00 3.20
3036 10716 3.336568 ACCCCGGACCGAGAGAGA 61.337 66.667 17.49 0.00 0.00 3.10
3037 10717 3.141488 CACCCCGGACCGAGAGAG 61.141 72.222 17.49 0.00 0.00 3.20
3038 10718 3.933048 GACACCCCGGACCGAGAGA 62.933 68.421 17.49 0.00 0.00 3.10
3039 10719 2.547640 TAGACACCCCGGACCGAGAG 62.548 65.000 17.49 7.60 0.00 3.20
3040 10720 1.929860 ATAGACACCCCGGACCGAGA 61.930 60.000 17.49 0.00 0.00 4.04
3041 10721 1.041447 AATAGACACCCCGGACCGAG 61.041 60.000 17.49 9.02 0.00 4.63
3042 10722 0.615544 AAATAGACACCCCGGACCGA 60.616 55.000 17.49 0.00 0.00 4.69
3043 10723 0.251073 AAAATAGACACCCCGGACCG 59.749 55.000 6.99 6.99 0.00 4.79
3044 10724 1.680860 CCAAAATAGACACCCCGGACC 60.681 57.143 0.73 0.00 0.00 4.46
3045 10725 1.680860 CCCAAAATAGACACCCCGGAC 60.681 57.143 0.73 0.00 0.00 4.79
3046 10726 0.621609 CCCAAAATAGACACCCCGGA 59.378 55.000 0.73 0.00 0.00 5.14
3047 10727 0.330267 ACCCAAAATAGACACCCCGG 59.670 55.000 0.00 0.00 0.00 5.73
3048 10728 3.570912 ATACCCAAAATAGACACCCCG 57.429 47.619 0.00 0.00 0.00 5.73
3049 10729 6.665695 TCTAAATACCCAAAATAGACACCCC 58.334 40.000 0.00 0.00 0.00 4.95
3050 10730 7.571025 TCTCTAAATACCCAAAATAGACACCC 58.429 38.462 0.00 0.00 0.00 4.61
3051 10731 7.715686 CCTCTCTAAATACCCAAAATAGACACC 59.284 40.741 0.00 0.00 0.00 4.16
3052 10732 7.226918 GCCTCTCTAAATACCCAAAATAGACAC 59.773 40.741 0.00 0.00 0.00 3.67
3053 10733 7.092623 TGCCTCTCTAAATACCCAAAATAGACA 60.093 37.037 0.00 0.00 0.00 3.41
3054 10734 7.280356 TGCCTCTCTAAATACCCAAAATAGAC 58.720 38.462 0.00 0.00 0.00 2.59
3055 10735 7.420214 CCTGCCTCTCTAAATACCCAAAATAGA 60.420 40.741 0.00 0.00 0.00 1.98
3056 10736 6.712547 CCTGCCTCTCTAAATACCCAAAATAG 59.287 42.308 0.00 0.00 0.00 1.73
3057 10737 6.159751 ACCTGCCTCTCTAAATACCCAAAATA 59.840 38.462 0.00 0.00 0.00 1.40
3058 10738 5.044105 ACCTGCCTCTCTAAATACCCAAAAT 60.044 40.000 0.00 0.00 0.00 1.82
3059 10739 4.291249 ACCTGCCTCTCTAAATACCCAAAA 59.709 41.667 0.00 0.00 0.00 2.44
3060 10740 3.850173 ACCTGCCTCTCTAAATACCCAAA 59.150 43.478 0.00 0.00 0.00 3.28
3061 10741 3.199946 CACCTGCCTCTCTAAATACCCAA 59.800 47.826 0.00 0.00 0.00 4.12
3062 10742 2.771943 CACCTGCCTCTCTAAATACCCA 59.228 50.000 0.00 0.00 0.00 4.51
3063 10743 3.039011 TCACCTGCCTCTCTAAATACCC 58.961 50.000 0.00 0.00 0.00 3.69
3064 10744 4.503991 CCATCACCTGCCTCTCTAAATACC 60.504 50.000 0.00 0.00 0.00 2.73
3065 10745 4.345257 TCCATCACCTGCCTCTCTAAATAC 59.655 45.833 0.00 0.00 0.00 1.89
3100 10780 0.537828 TAAACCGGCAAGTTGGGGTC 60.538 55.000 0.00 0.00 30.99 4.46
3107 10788 1.173913 GGCATTCTAAACCGGCAAGT 58.826 50.000 0.00 0.00 0.00 3.16
3148 10829 2.540361 CGGAAAGCATGCAAGATGTAGC 60.540 50.000 21.98 0.00 0.00 3.58
3196 10877 6.860539 TGTTCAATTGTATGCATGTACAACAC 59.139 34.615 15.50 11.03 44.63 3.32
3296 10977 3.244875 ACATCCAAGAGCACCATACAACA 60.245 43.478 0.00 0.00 0.00 3.33
3311 10992 9.814899 CCTAAAATATGTAATTGCAACATCCAA 57.185 29.630 0.00 0.00 38.49 3.53
3313 10994 7.384932 GGCCTAAAATATGTAATTGCAACATCC 59.615 37.037 0.00 0.00 38.49 3.51
3318 10999 9.678260 AAATTGGCCTAAAATATGTAATTGCAA 57.322 25.926 3.32 0.00 0.00 4.08
3335 11016 5.564848 GCTTCGAAACTTAGAAAATTGGCCT 60.565 40.000 3.32 0.00 0.00 5.19
3337 11018 5.461526 AGCTTCGAAACTTAGAAAATTGGC 58.538 37.500 0.00 0.00 0.00 4.52
3339 11020 6.072452 AGGGAGCTTCGAAACTTAGAAAATTG 60.072 38.462 2.02 0.00 0.00 2.32
3346 11027 3.700038 TCCTAGGGAGCTTCGAAACTTAG 59.300 47.826 9.46 1.21 0.00 2.18
3355 11036 4.888239 TGCGTATATATCCTAGGGAGCTTC 59.112 45.833 9.46 0.00 34.05 3.86
3414 11127 3.543680 TGCCTTCATGCTAGTAACTCC 57.456 47.619 0.00 0.00 0.00 3.85
3481 11194 4.217550 TGTGCTTGGAGCCTGTATTTTAAC 59.782 41.667 0.00 0.00 41.51 2.01
3519 11232 6.367374 TGGATGTGTTTTGTAGTCCTCATA 57.633 37.500 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.