Multiple sequence alignment - TraesCS1A01G256400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G256400 chr1A 100.000 5209 0 0 290 5498 448926164 448931372 0.000000e+00 9620.0
1 TraesCS1A01G256400 chr1A 83.483 333 42 10 3441 3768 441747890 441747566 1.160000e-76 298.0
2 TraesCS1A01G256400 chr1A 100.000 53 0 0 1 53 448925875 448925927 1.260000e-16 99.0
3 TraesCS1A01G256400 chr1A 95.745 47 1 1 1840 1885 14236881 14236927 2.120000e-09 75.0
4 TraesCS1A01G256400 chr1A 92.593 54 1 3 1842 1893 572016732 572016784 2.120000e-09 75.0
5 TraesCS1A01G256400 chr1A 90.909 55 4 1 4872 4926 574918108 574918055 7.640000e-09 73.1
6 TraesCS1A01G256400 chr1A 95.122 41 2 0 2388 2428 496440064 496440104 1.280000e-06 65.8
7 TraesCS1A01G256400 chr1D 92.888 1842 84 23 1956 3769 348064420 348066242 0.000000e+00 2632.0
8 TraesCS1A01G256400 chr1D 88.945 1384 63 36 540 1885 348063053 348064384 0.000000e+00 1626.0
9 TraesCS1A01G256400 chr1D 94.387 962 38 9 3950 4895 348066383 348067344 0.000000e+00 1463.0
10 TraesCS1A01G256400 chr1D 87.132 272 30 3 4891 5159 348094144 348094413 2.490000e-78 303.0
11 TraesCS1A01G256400 chr1D 87.243 243 21 4 307 539 348062774 348063016 9.080000e-68 268.0
12 TraesCS1A01G256400 chr1D 86.188 181 23 1 5157 5337 348102799 348102977 1.560000e-45 195.0
13 TraesCS1A01G256400 chr1D 96.939 98 1 2 3858 3954 321678020 321677924 4.410000e-36 163.0
14 TraesCS1A01G256400 chr1D 94.792 96 5 0 3769 3864 348066289 348066384 3.430000e-32 150.0
15 TraesCS1A01G256400 chr1D 89.706 68 7 0 5431 5498 472563326 472563393 2.730000e-13 87.9
16 TraesCS1A01G256400 chr1D 97.674 43 0 1 1844 1885 307349242 307349200 7.640000e-09 73.1
17 TraesCS1A01G256400 chr1D 95.455 44 1 1 1843 1885 326480031 326479988 9.880000e-08 69.4
18 TraesCS1A01G256400 chr1D 91.489 47 3 1 1844 1889 212503064 212503018 4.600000e-06 63.9
19 TraesCS1A01G256400 chr1D 100.000 29 0 0 1177 1205 406552674 406552646 3.000000e-03 54.7
20 TraesCS1A01G256400 chr1B 92.247 1019 54 12 2425 3426 470000835 470001845 0.000000e+00 1421.0
21 TraesCS1A01G256400 chr1B 90.359 1058 83 12 4304 5349 470002630 470003680 0.000000e+00 1371.0
22 TraesCS1A01G256400 chr1B 87.973 1164 78 28 560 1682 469998970 470000112 0.000000e+00 1317.0
23 TraesCS1A01G256400 chr1B 93.963 381 17 3 1963 2337 470000459 470000839 6.180000e-159 571.0
24 TraesCS1A01G256400 chr1B 94.578 166 8 1 1683 1848 470000296 470000460 7.070000e-64 255.0
25 TraesCS1A01G256400 chr1B 87.640 178 12 2 3957 4124 470002181 470002358 1.210000e-46 198.0
26 TraesCS1A01G256400 chr1B 87.975 158 9 5 382 539 469998755 469998902 1.570000e-40 178.0
27 TraesCS1A01G256400 chr1B 84.615 91 13 1 4840 4930 686935314 686935403 7.590000e-14 89.8
28 TraesCS1A01G256400 chr1B 84.444 90 9 4 4838 4925 578035154 578035068 3.530000e-12 84.2
29 TraesCS1A01G256400 chr1B 97.727 44 1 0 3783 3826 470001835 470001878 5.910000e-10 76.8
30 TraesCS1A01G256400 chr1B 100.000 29 0 0 2401 2429 5850157 5850129 3.000000e-03 54.7
31 TraesCS1A01G256400 chr7B 87.861 346 31 9 3427 3769 680115029 680115366 3.990000e-106 396.0
32 TraesCS1A01G256400 chr7B 92.432 185 12 2 3217 3401 411048317 411048499 4.220000e-66 263.0
33 TraesCS1A01G256400 chr7B 93.333 135 8 1 5365 5498 246018863 246018729 1.210000e-46 198.0
34 TraesCS1A01G256400 chr7B 100.000 29 0 0 1909 1937 718959189 718959217 3.000000e-03 54.7
35 TraesCS1A01G256400 chr2B 84.036 332 42 10 3438 3767 347064761 347065083 5.350000e-80 309.0
36 TraesCS1A01G256400 chr2D 83.735 332 45 9 3438 3767 392364807 392365131 6.920000e-79 305.0
37 TraesCS1A01G256400 chr2D 83.234 334 50 5 3438 3769 631416108 631416437 8.950000e-78 302.0
38 TraesCS1A01G256400 chr2D 83.133 332 45 9 3438 3767 106676506 106676828 5.390000e-75 292.0
39 TraesCS1A01G256400 chr2D 78.135 311 58 7 5044 5349 480166819 480166514 7.270000e-44 189.0
40 TraesCS1A01G256400 chr2D 94.175 103 5 1 3855 3957 164992673 164992774 7.370000e-34 156.0
41 TraesCS1A01G256400 chr6A 83.891 329 42 10 3441 3767 445769189 445768870 2.490000e-78 303.0
42 TraesCS1A01G256400 chr6A 92.021 188 12 3 3215 3401 457379551 457379366 1.520000e-65 261.0
43 TraesCS1A01G256400 chr6A 91.852 135 11 0 5364 5498 362593425 362593559 7.270000e-44 189.0
44 TraesCS1A01G256400 chr6A 97.727 44 0 1 1843 1885 400115553 400115510 2.120000e-09 75.0
45 TraesCS1A01G256400 chr3A 83.735 332 43 10 3438 3767 114697409 114697731 2.490000e-78 303.0
46 TraesCS1A01G256400 chr3A 92.432 185 14 0 3214 3398 77542426 77542610 1.170000e-66 265.0
47 TraesCS1A01G256400 chr3A 81.579 228 36 6 3428 3652 748209351 748209127 3.380000e-42 183.0
48 TraesCS1A01G256400 chr3A 81.579 228 36 6 3428 3652 748552085 748551861 3.380000e-42 183.0
49 TraesCS1A01G256400 chr3A 81.579 228 36 6 3428 3652 748665599 748665375 3.380000e-42 183.0
50 TraesCS1A01G256400 chr3A 78.008 241 45 7 5109 5347 738427276 738427510 1.600000e-30 145.0
51 TraesCS1A01G256400 chr3A 77.500 240 48 5 5109 5347 738613342 738613576 7.430000e-29 139.0
52 TraesCS1A01G256400 chr3A 92.308 52 0 3 1838 1885 601398933 601398882 2.750000e-08 71.3
53 TraesCS1A01G256400 chr3A 97.059 34 0 1 4892 4925 597181205 597181173 7.690000e-04 56.5
54 TraesCS1A01G256400 chr7A 82.799 343 53 6 3427 3767 654781804 654782142 8.950000e-78 302.0
55 TraesCS1A01G256400 chr7A 93.333 135 9 0 5364 5498 99701367 99701501 3.360000e-47 200.0
56 TraesCS1A01G256400 chr6B 82.029 345 47 10 3427 3769 46068986 46068655 4.190000e-71 279.0
57 TraesCS1A01G256400 chr6B 86.000 100 14 0 5399 5498 624694853 624694952 2.090000e-19 108.0
58 TraesCS1A01G256400 chr6B 95.745 47 1 1 1840 1885 76149840 76149794 2.120000e-09 75.0
59 TraesCS1A01G256400 chr6B 92.157 51 2 2 1837 1885 646750154 646750104 2.750000e-08 71.3
60 TraesCS1A01G256400 chr6B 92.157 51 2 2 1837 1885 646750264 646750214 2.750000e-08 71.3
61 TraesCS1A01G256400 chr4D 94.382 178 10 0 3217 3394 23322901 23322724 1.950000e-69 274.0
62 TraesCS1A01G256400 chr4D 91.753 194 15 1 3213 3405 482703440 482703633 9.080000e-68 268.0
63 TraesCS1A01G256400 chr4D 80.516 349 55 11 5007 5349 93344914 93344573 7.070000e-64 255.0
64 TraesCS1A01G256400 chr4D 97.619 42 0 1 1844 1884 220369377 220369336 2.750000e-08 71.3
65 TraesCS1A01G256400 chr4D 97.561 41 0 1 1846 1885 220369260 220369300 9.880000e-08 69.4
66 TraesCS1A01G256400 chr4D 95.455 44 1 1 1843 1885 502406285 502406328 9.880000e-08 69.4
67 TraesCS1A01G256400 chr4D 90.385 52 4 1 1838 1888 50974697 50974646 3.550000e-07 67.6
68 TraesCS1A01G256400 chr4D 97.500 40 0 1 1847 1885 483109666 483109705 3.550000e-07 67.6
69 TraesCS1A01G256400 chr4D 97.436 39 0 1 1848 1885 7830242 7830280 1.280000e-06 65.8
70 TraesCS1A01G256400 chr4D 97.436 39 0 1 1847 1884 19395048 19395010 1.280000e-06 65.8
71 TraesCS1A01G256400 chr4D 97.436 39 0 1 1847 1884 34601040 34601078 1.280000e-06 65.8
72 TraesCS1A01G256400 chr4D 97.436 39 0 1 4887 4925 66303777 66303740 1.280000e-06 65.8
73 TraesCS1A01G256400 chr4D 95.122 41 2 0 1840 1880 252173697 252173737 1.280000e-06 65.8
74 TraesCS1A01G256400 chr4D 91.304 46 2 2 1842 1885 320593729 320593774 1.650000e-05 62.1
75 TraesCS1A01G256400 chr4D 91.111 45 3 1 4881 4925 450220324 450220367 5.950000e-05 60.2
76 TraesCS1A01G256400 chr4D 97.059 34 0 1 4892 4925 75264109 75264077 7.690000e-04 56.5
77 TraesCS1A01G256400 chr4D 96.875 32 1 0 1913 1944 79730701 79730732 3.000000e-03 54.7
78 TraesCS1A01G256400 chr3D 93.889 180 11 0 3215 3394 422517611 422517790 7.020000e-69 272.0
79 TraesCS1A01G256400 chr3D 78.221 326 53 9 3426 3745 85825275 85825588 5.620000e-45 193.0
80 TraesCS1A01G256400 chr3D 97.436 39 0 1 1848 1885 384662823 384662861 1.280000e-06 65.8
81 TraesCS1A01G256400 chr3D 96.970 33 1 0 4893 4925 511899698 511899730 7.690000e-04 56.5
82 TraesCS1A01G256400 chr3B 92.063 189 14 1 3214 3401 368605651 368605463 1.170000e-66 265.0
83 TraesCS1A01G256400 chr3B 93.333 135 9 0 5364 5498 7270512 7270378 3.360000e-47 200.0
84 TraesCS1A01G256400 chr3B 83.908 87 12 1 4840 4926 818304770 818304686 1.270000e-11 82.4
85 TraesCS1A01G256400 chr4A 90.196 153 14 1 5346 5498 467293218 467293067 1.210000e-46 198.0
86 TraesCS1A01G256400 chr4A 97.436 39 0 1 4887 4925 514922205 514922168 1.280000e-06 65.8
87 TraesCS1A01G256400 chr4A 100.000 28 0 0 4838 4865 522132475 522132502 1.000000e-02 52.8
88 TraesCS1A01G256400 chrUn 81.579 228 36 6 3428 3652 320623389 320623165 3.380000e-42 183.0
89 TraesCS1A01G256400 chrUn 77.500 240 48 5 5109 5347 396395268 396395502 7.430000e-29 139.0
90 TraesCS1A01G256400 chrUn 100.000 34 0 0 1847 1880 73917627 73917594 4.600000e-06 63.9
91 TraesCS1A01G256400 chrUn 87.719 57 4 3 1831 1885 153391827 153391882 4.600000e-06 63.9
92 TraesCS1A01G256400 chrUn 97.059 34 1 0 1847 1880 37844549 37844516 2.140000e-04 58.4
93 TraesCS1A01G256400 chrUn 90.698 43 3 1 1844 1885 201356659 201356617 7.690000e-04 56.5
94 TraesCS1A01G256400 chrUn 100.000 28 0 0 4838 4865 357003647 357003674 1.000000e-02 52.8
95 TraesCS1A01G256400 chr4B 92.000 125 10 0 5364 5488 139554269 139554393 5.660000e-40 176.0
96 TraesCS1A01G256400 chr4B 98.936 94 0 1 3866 3959 1994884 1994976 3.410000e-37 167.0
97 TraesCS1A01G256400 chr4B 93.333 105 5 2 3859 3961 476301797 476301693 2.650000e-33 154.0
98 TraesCS1A01G256400 chr4B 94.118 102 3 3 3867 3967 161553159 161553258 9.540000e-33 152.0
99 TraesCS1A01G256400 chr4B 95.556 45 1 1 1842 1885 31756513 31756469 2.750000e-08 71.3
100 TraesCS1A01G256400 chr4B 97.297 37 0 1 4889 4925 96930811 96930776 1.650000e-05 62.1
101 TraesCS1A01G256400 chr7D 94.175 103 4 2 3854 3954 131620236 131620134 7.370000e-34 156.0
102 TraesCS1A01G256400 chr7D 89.062 64 7 0 5435 5498 22270525 22270588 4.570000e-11 80.5
103 TraesCS1A01G256400 chr7D 94.737 38 1 1 4890 4927 576296166 576296130 2.140000e-04 58.4
104 TraesCS1A01G256400 chr7D 100.000 29 0 0 4838 4866 436983275 436983247 3.000000e-03 54.7
105 TraesCS1A01G256400 chr6D 95.876 97 3 1 3862 3957 95294994 95294898 7.370000e-34 156.0
106 TraesCS1A01G256400 chr6D 93.617 47 1 2 1840 1885 58433751 58433796 9.880000e-08 69.4
107 TraesCS1A01G256400 chr6D 81.319 91 10 6 4838 4925 389976874 389976960 3.550000e-07 67.6
108 TraesCS1A01G256400 chr6D 86.207 58 4 4 1843 1898 13903463 13903518 5.950000e-05 60.2
109 TraesCS1A01G256400 chr6D 96.970 33 0 1 4892 4924 430388466 430388497 3.000000e-03 54.7
110 TraesCS1A01G256400 chr5B 95.789 95 3 1 3857 3951 121201251 121201344 9.540000e-33 152.0
111 TraesCS1A01G256400 chr5B 94.059 101 5 1 3867 3967 625957448 625957547 9.540000e-33 152.0
112 TraesCS1A01G256400 chr5B 97.674 43 0 1 1844 1885 480297082 480297040 7.640000e-09 73.1
113 TraesCS1A01G256400 chr5B 92.000 50 2 2 1837 1885 251577560 251577512 9.880000e-08 69.4
114 TraesCS1A01G256400 chr5B 88.136 59 0 6 1828 1885 345055462 345055410 4.600000e-06 63.9
115 TraesCS1A01G256400 chr5B 100.000 31 0 0 1907 1937 568419343 568419373 2.140000e-04 58.4
116 TraesCS1A01G256400 chr5B 100.000 29 0 0 1909 1937 269975243 269975215 3.000000e-03 54.7
117 TraesCS1A01G256400 chr5B 100.000 28 0 0 2401 2428 706306937 706306964 1.000000e-02 52.8
118 TraesCS1A01G256400 chr2A 77.169 219 45 4 5051 5268 129858137 129857923 7.480000e-24 122.0
119 TraesCS1A01G256400 chr2A 100.000 28 0 0 1910 1937 755848732 755848705 1.000000e-02 52.8
120 TraesCS1A01G256400 chr2A 100.000 28 0 0 4838 4865 770388997 770389024 1.000000e-02 52.8
121 TraesCS1A01G256400 chr5D 93.617 47 1 2 1840 1885 395728038 395728083 9.880000e-08 69.4
122 TraesCS1A01G256400 chr5D 92.157 51 1 3 1838 1885 513975158 513975108 9.880000e-08 69.4
123 TraesCS1A01G256400 chr5D 100.000 28 0 0 2401 2428 563855501 563855528 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G256400 chr1A 448925875 448931372 5497 False 4859.500 9620 100.00000 1 5498 2 chr1A.!!$F4 5497
1 TraesCS1A01G256400 chr1D 348062774 348067344 4570 False 1227.800 2632 91.65100 307 4895 5 chr1D.!!$F4 4588
2 TraesCS1A01G256400 chr1B 469998755 470003680 4925 False 673.475 1421 91.55775 382 5349 8 chr1B.!!$F2 4967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 371 0.178767 TGTATGCGAGCATCTGCCTT 59.821 50.0 14.35 0.0 43.38 4.35 F
1332 1418 0.108424 CCAGGAGTCGGAGAAGCAAG 60.108 60.0 0.00 0.0 39.69 4.01 F
1358 1448 0.248661 CGTAGGTCCGATCTGTGCAG 60.249 60.0 0.00 0.0 0.00 4.41 F
3074 3386 0.037590 GCAATCCACCACCACCTACA 59.962 55.0 0.00 0.0 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 1979 0.973632 ACGTATCAGGGTGCAACTCA 59.026 50.000 0.00 0.00 42.69 3.41 R
2730 3040 1.432514 TCTCGTTGCTGTGCATCTTC 58.567 50.000 0.00 0.00 38.76 2.87 R
3281 3602 2.309613 TCTGCAACAAGCTGTTTCCAT 58.690 42.857 0.00 0.00 45.94 3.41 R
5063 5760 0.393448 TGTTAGGGTGCGCTTGTACA 59.607 50.000 9.73 2.69 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.778278 GGGGATGCTGGGGGATGA 60.778 66.667 0.00 0.00 0.00 2.92
18 19 2.394506 GGGGATGCTGGGGGATGAA 61.395 63.158 0.00 0.00 0.00 2.57
19 20 1.733387 GGGGATGCTGGGGGATGAAT 61.733 60.000 0.00 0.00 0.00 2.57
20 21 0.189327 GGGATGCTGGGGGATGAATT 59.811 55.000 0.00 0.00 0.00 2.17
21 22 1.625511 GGATGCTGGGGGATGAATTC 58.374 55.000 0.00 0.00 0.00 2.17
22 23 1.133388 GGATGCTGGGGGATGAATTCA 60.133 52.381 11.26 11.26 0.00 2.57
23 24 2.669781 GATGCTGGGGGATGAATTCAA 58.330 47.619 13.09 0.00 0.00 2.69
24 25 2.619697 TGCTGGGGGATGAATTCAAA 57.380 45.000 13.09 0.00 0.00 2.69
25 26 2.459644 TGCTGGGGGATGAATTCAAAG 58.540 47.619 13.09 5.00 0.00 2.77
26 27 2.042842 TGCTGGGGGATGAATTCAAAGA 59.957 45.455 13.09 0.00 0.00 2.52
27 28 2.692041 GCTGGGGGATGAATTCAAAGAG 59.308 50.000 13.09 4.37 0.00 2.85
28 29 3.294214 CTGGGGGATGAATTCAAAGAGG 58.706 50.000 13.09 0.00 0.00 3.69
29 30 2.024080 TGGGGGATGAATTCAAAGAGGG 60.024 50.000 13.09 0.00 0.00 4.30
30 31 2.670939 GGGGATGAATTCAAAGAGGGG 58.329 52.381 13.09 0.00 0.00 4.79
31 32 2.244769 GGGGATGAATTCAAAGAGGGGA 59.755 50.000 13.09 0.00 0.00 4.81
32 33 3.116977 GGGGATGAATTCAAAGAGGGGAT 60.117 47.826 13.09 0.00 0.00 3.85
33 34 4.550669 GGGATGAATTCAAAGAGGGGATT 58.449 43.478 13.09 0.00 0.00 3.01
34 35 4.964897 GGGATGAATTCAAAGAGGGGATTT 59.035 41.667 13.09 0.00 0.00 2.17
35 36 6.136155 GGGATGAATTCAAAGAGGGGATTTA 58.864 40.000 13.09 0.00 0.00 1.40
36 37 6.784473 GGGATGAATTCAAAGAGGGGATTTAT 59.216 38.462 13.09 0.00 0.00 1.40
37 38 7.290948 GGGATGAATTCAAAGAGGGGATTTATT 59.709 37.037 13.09 0.00 0.00 1.40
38 39 8.708378 GGATGAATTCAAAGAGGGGATTTATTT 58.292 33.333 13.09 0.00 0.00 1.40
39 40 9.538508 GATGAATTCAAAGAGGGGATTTATTTG 57.461 33.333 13.09 0.00 33.25 2.32
40 41 8.663209 TGAATTCAAAGAGGGGATTTATTTGA 57.337 30.769 5.45 0.00 37.92 2.69
41 42 8.752187 TGAATTCAAAGAGGGGATTTATTTGAG 58.248 33.333 5.45 0.00 40.02 3.02
42 43 8.670521 AATTCAAAGAGGGGATTTATTTGAGT 57.329 30.769 0.00 0.00 40.02 3.41
43 44 7.466746 TTCAAAGAGGGGATTTATTTGAGTG 57.533 36.000 0.00 0.00 40.02 3.51
44 45 6.789268 TCAAAGAGGGGATTTATTTGAGTGA 58.211 36.000 0.00 0.00 35.55 3.41
45 46 7.237982 TCAAAGAGGGGATTTATTTGAGTGAA 58.762 34.615 0.00 0.00 35.55 3.18
46 47 7.176690 TCAAAGAGGGGATTTATTTGAGTGAAC 59.823 37.037 0.00 0.00 35.55 3.18
47 48 6.139679 AGAGGGGATTTATTTGAGTGAACA 57.860 37.500 0.00 0.00 0.00 3.18
48 49 6.552008 AGAGGGGATTTATTTGAGTGAACAA 58.448 36.000 0.00 0.00 0.00 2.83
49 50 7.010160 AGAGGGGATTTATTTGAGTGAACAAA 58.990 34.615 0.00 0.00 42.58 2.83
50 51 7.508977 AGAGGGGATTTATTTGAGTGAACAAAA 59.491 33.333 0.00 0.00 41.88 2.44
51 52 8.206126 AGGGGATTTATTTGAGTGAACAAAAT 57.794 30.769 0.00 0.00 41.88 1.82
52 53 8.096414 AGGGGATTTATTTGAGTGAACAAAATG 58.904 33.333 0.00 0.00 41.88 2.32
323 324 8.873830 CGACATTAAGAAGACAGTGTGATTAAT 58.126 33.333 0.00 3.46 0.00 1.40
340 341 9.850198 TGTGATTAATATCAAGAATGGATGTCA 57.150 29.630 0.00 0.00 42.23 3.58
360 365 2.347697 TACGGATGTATGCGAGCATC 57.652 50.000 14.35 7.12 44.78 3.91
364 369 0.795085 GATGTATGCGAGCATCTGCC 59.205 55.000 14.35 2.46 43.38 4.85
366 371 0.178767 TGTATGCGAGCATCTGCCTT 59.821 50.000 14.35 0.00 43.38 4.35
376 381 4.260375 CGAGCATCTGCCTTTGTACAATAC 60.260 45.833 9.56 2.73 43.38 1.89
380 385 5.447818 GCATCTGCCTTTGTACAATACTCAC 60.448 44.000 9.56 0.00 34.31 3.51
442 453 6.483307 GTCATTTGAATCATTCACGGAGGATA 59.517 38.462 0.00 0.00 39.87 2.59
479 490 1.072159 ATGCTGATTAGGAGCGGCC 59.928 57.895 0.00 0.00 42.87 6.13
578 636 4.350368 TGTGATGAAGTGACTAGGCAAA 57.650 40.909 0.00 0.00 0.00 3.68
579 637 4.713553 TGTGATGAAGTGACTAGGCAAAA 58.286 39.130 0.00 0.00 0.00 2.44
620 688 5.008712 GGAGACAACACTTGTTTTTAGGGAG 59.991 44.000 0.00 0.00 45.52 4.30
623 691 6.661805 AGACAACACTTGTTTTTAGGGAGAAA 59.338 34.615 0.00 0.00 45.52 2.52
625 693 7.847096 ACAACACTTGTTTTTAGGGAGAAAAT 58.153 30.769 0.00 0.00 42.22 1.82
627 695 6.280643 ACACTTGTTTTTAGGGAGAAAATGC 58.719 36.000 0.00 0.00 0.00 3.56
628 696 6.127196 ACACTTGTTTTTAGGGAGAAAATGCA 60.127 34.615 0.00 0.00 0.00 3.96
638 706 5.082425 AGGGAGAAAATGCACTCTTTCAAT 58.918 37.500 16.05 1.63 34.60 2.57
639 707 5.184671 AGGGAGAAAATGCACTCTTTCAATC 59.815 40.000 16.05 8.51 34.60 2.67
640 708 5.047802 GGGAGAAAATGCACTCTTTCAATCA 60.048 40.000 16.05 0.00 34.60 2.57
644 712 8.134905 AGAAAATGCACTCTTTCAATCAAAAC 57.865 30.769 16.05 0.00 34.60 2.43
679 747 7.382218 AGACGACCAAAATCATGAAATTTCAAC 59.618 33.333 23.91 0.00 41.13 3.18
703 771 3.737559 AATAAAGCCACCATCTCACCA 57.262 42.857 0.00 0.00 0.00 4.17
735 803 3.719840 CGCAATCGACTAGAAGACGTTAG 59.280 47.826 0.00 0.00 38.10 2.34
800 878 1.644786 GGCAAGTTCGTTCCCATCCG 61.645 60.000 0.00 0.00 0.00 4.18
936 1014 2.357881 CGCAAGCAGGCAGACAGA 60.358 61.111 0.50 0.00 0.00 3.41
1227 1305 4.622456 CAGGTGCGCCGCGTTTTT 62.622 61.111 15.34 0.00 40.50 1.94
1287 1373 0.520404 TCGTCGGAGTAAGCTGTGTC 59.480 55.000 0.00 0.00 0.00 3.67
1329 1415 1.513622 GTCCAGGAGTCGGAGAAGC 59.486 63.158 0.00 0.00 39.69 3.86
1331 1417 0.541998 TCCAGGAGTCGGAGAAGCAA 60.542 55.000 0.00 0.00 39.69 3.91
1332 1418 0.108424 CCAGGAGTCGGAGAAGCAAG 60.108 60.000 0.00 0.00 39.69 4.01
1358 1448 0.248661 CGTAGGTCCGATCTGTGCAG 60.249 60.000 0.00 0.00 0.00 4.41
1374 1470 4.268359 TGTGCAGGTACATAATGATGCAA 58.732 39.130 0.00 0.00 44.43 4.08
1380 1476 6.402983 GCAGGTACATAATGATGCAAGATAGC 60.403 42.308 0.00 0.00 36.43 2.97
1427 1523 6.851330 GTCGATTTCAGAATTTCGTTGACTTT 59.149 34.615 13.03 0.00 0.00 2.66
1445 1545 3.184986 ACTTTAAACGTGTGCGGATGTAC 59.815 43.478 0.00 0.00 43.45 2.90
1487 1587 0.965439 TTTTAAGCGCCCAACAGCAT 59.035 45.000 2.29 0.00 35.48 3.79
1532 1632 1.949525 GCAGAGTTTGTTGGCTTCAGA 59.050 47.619 0.00 0.00 0.00 3.27
1533 1633 2.287248 GCAGAGTTTGTTGGCTTCAGAC 60.287 50.000 0.00 0.00 0.00 3.51
1534 1634 3.209410 CAGAGTTTGTTGGCTTCAGACT 58.791 45.455 5.68 5.68 33.90 3.24
1535 1635 3.249559 CAGAGTTTGTTGGCTTCAGACTC 59.750 47.826 17.87 17.87 43.05 3.36
1560 1660 6.863126 CCAGTGGAAACATAAGCAACTTTTAG 59.137 38.462 1.68 0.00 46.14 1.85
1570 1670 8.474831 ACATAAGCAACTTTTAGAAACCACTTT 58.525 29.630 0.00 0.00 0.00 2.66
1665 1766 2.343101 TCGCGTGCACTTTATTAGCTT 58.657 42.857 16.19 0.00 0.00 3.74
1667 1768 3.550275 TCGCGTGCACTTTATTAGCTTAG 59.450 43.478 16.19 0.00 0.00 2.18
1703 1987 3.943381 GACTGATCATGGATTGAGTTGCA 59.057 43.478 0.00 0.00 37.89 4.08
1710 1994 1.355381 TGGATTGAGTTGCACCCTGAT 59.645 47.619 0.00 0.00 0.00 2.90
1743 2027 4.381398 GGATCATCATGAGATACTCCCACG 60.381 50.000 0.09 0.00 32.07 4.94
1892 2179 7.870588 AAGATCGTTTAGTCACTTAGTTCAC 57.129 36.000 0.00 0.00 0.00 3.18
1893 2180 6.978338 AGATCGTTTAGTCACTTAGTTCACA 58.022 36.000 0.00 0.00 0.00 3.58
1894 2181 6.862090 AGATCGTTTAGTCACTTAGTTCACAC 59.138 38.462 0.00 0.00 0.00 3.82
1895 2182 4.971830 TCGTTTAGTCACTTAGTTCACACG 59.028 41.667 0.00 0.00 0.00 4.49
1896 2183 4.971830 CGTTTAGTCACTTAGTTCACACGA 59.028 41.667 0.00 0.00 0.00 4.35
1897 2184 5.115171 CGTTTAGTCACTTAGTTCACACGAG 59.885 44.000 0.00 0.00 0.00 4.18
1898 2185 5.762825 TTAGTCACTTAGTTCACACGAGT 57.237 39.130 0.00 0.00 0.00 4.18
1899 2186 4.650754 AGTCACTTAGTTCACACGAGTT 57.349 40.909 0.00 0.00 0.00 3.01
1902 2189 3.635373 TCACTTAGTTCACACGAGTTCCT 59.365 43.478 0.00 0.00 0.00 3.36
1903 2190 3.982058 CACTTAGTTCACACGAGTTCCTC 59.018 47.826 0.00 0.00 0.00 3.71
1905 2192 2.802787 AGTTCACACGAGTTCCTCTG 57.197 50.000 0.00 0.00 0.00 3.35
1906 2193 2.307768 AGTTCACACGAGTTCCTCTGA 58.692 47.619 0.00 0.00 0.00 3.27
1911 2198 5.752892 TCACACGAGTTCCTCTGATATAC 57.247 43.478 0.00 0.00 0.00 1.47
1912 2199 5.190677 TCACACGAGTTCCTCTGATATACA 58.809 41.667 0.00 0.00 0.00 2.29
1913 2200 5.066117 TCACACGAGTTCCTCTGATATACAC 59.934 44.000 0.00 0.00 0.00 2.90
1914 2201 5.066634 CACACGAGTTCCTCTGATATACACT 59.933 44.000 0.00 0.00 0.00 3.55
1915 2202 5.297278 ACACGAGTTCCTCTGATATACACTC 59.703 44.000 0.00 0.00 0.00 3.51
1916 2203 4.822896 ACGAGTTCCTCTGATATACACTCC 59.177 45.833 0.00 0.00 0.00 3.85
1917 2204 4.216687 CGAGTTCCTCTGATATACACTCCC 59.783 50.000 0.00 0.00 0.00 4.30
1918 2205 5.390387 GAGTTCCTCTGATATACACTCCCT 58.610 45.833 0.00 0.00 0.00 4.20
1920 2207 5.135362 AGTTCCTCTGATATACACTCCCTCT 59.865 44.000 0.00 0.00 0.00 3.69
1921 2208 4.991776 TCCTCTGATATACACTCCCTCTG 58.008 47.826 0.00 0.00 0.00 3.35
1922 2209 4.417183 TCCTCTGATATACACTCCCTCTGT 59.583 45.833 0.00 0.00 0.00 3.41
1923 2210 5.611408 TCCTCTGATATACACTCCCTCTGTA 59.389 44.000 0.00 0.00 0.00 2.74
1924 2211 6.102762 TCCTCTGATATACACTCCCTCTGTAA 59.897 42.308 0.00 0.00 0.00 2.41
1925 2212 6.778069 CCTCTGATATACACTCCCTCTGTAAA 59.222 42.308 0.00 0.00 0.00 2.01
1926 2213 7.040062 CCTCTGATATACACTCCCTCTGTAAAG 60.040 44.444 0.00 0.00 0.00 1.85
1927 2214 7.583625 TCTGATATACACTCCCTCTGTAAAGA 58.416 38.462 0.00 0.00 0.00 2.52
1928 2215 8.059461 TCTGATATACACTCCCTCTGTAAAGAA 58.941 37.037 0.00 0.00 0.00 2.52
1929 2216 8.603898 TGATATACACTCCCTCTGTAAAGAAA 57.396 34.615 0.00 0.00 0.00 2.52
1930 2217 9.213777 TGATATACACTCCCTCTGTAAAGAAAT 57.786 33.333 0.00 0.00 0.00 2.17
1936 2223 9.268282 ACACTCCCTCTGTAAAGAAATATAAGA 57.732 33.333 0.00 0.00 0.00 2.10
1983 2270 7.202011 GGGAGTAATGCTTAAGTTCCTCTGATA 60.202 40.741 4.02 0.00 0.00 2.15
1984 2271 8.204836 GGAGTAATGCTTAAGTTCCTCTGATAA 58.795 37.037 4.02 0.00 0.00 1.75
2042 2335 4.940046 CCTCTGATGTTAATCTTGCTGTGT 59.060 41.667 0.00 0.00 33.61 3.72
2068 2361 1.069978 TCTGCATTGGAGTTCACACGA 59.930 47.619 5.02 0.00 0.00 4.35
2110 2403 2.564721 GGTTGCTGGGACCTTGCAC 61.565 63.158 10.61 7.14 36.37 4.57
2218 2511 0.669318 TTGTCGAGTTCCGTCATGCC 60.669 55.000 0.00 0.00 36.33 4.40
2256 2549 1.129437 GTCTTCCGTTGCTTCTGATGC 59.871 52.381 8.46 8.46 0.00 3.91
2311 2621 8.035984 ACTAGCTTTCTTAACATCTAAGGTGAC 58.964 37.037 0.00 0.00 0.00 3.67
2340 2650 8.038944 TGTTGAATGTTATCAAGTACTACCTCC 58.961 37.037 0.00 0.00 39.84 4.30
2348 2658 5.314718 TCAAGTACTACCTCCGATCCATA 57.685 43.478 0.00 0.00 0.00 2.74
2351 2661 6.264744 TCAAGTACTACCTCCGATCCATAAAG 59.735 42.308 0.00 0.00 0.00 1.85
2358 2668 3.384789 CCTCCGATCCATAAAGAGTGTCA 59.615 47.826 0.00 0.00 0.00 3.58
2366 2676 6.861065 TCCATAAAGAGTGTCACAGTTTTC 57.139 37.500 5.62 0.00 0.00 2.29
2368 2678 6.826231 TCCATAAAGAGTGTCACAGTTTTCAA 59.174 34.615 5.62 0.00 0.00 2.69
2369 2679 6.912591 CCATAAAGAGTGTCACAGTTTTCAAC 59.087 38.462 5.62 0.00 0.00 3.18
2398 2708 8.271458 ACCCCAGTTCAAAACTAATTCAAAATT 58.729 29.630 0.00 0.00 40.46 1.82
2418 2728 4.335082 TTGCGACAGTTATTTTGGATCG 57.665 40.909 0.00 0.00 0.00 3.69
2466 2776 7.766219 AAGTATTTCAATGCTGATGATTTGC 57.234 32.000 0.00 0.00 31.50 3.68
2471 2781 2.596904 ATGCTGATGATTTGCCTTGC 57.403 45.000 0.00 0.00 0.00 4.01
2473 2783 0.533491 GCTGATGATTTGCCTTGCCA 59.467 50.000 0.00 0.00 0.00 4.92
2478 2788 1.630223 TGATTTGCCTTGCCACATGA 58.370 45.000 0.00 0.00 0.00 3.07
2574 2884 3.842007 AATCCAGCAAGAGATCTCTGG 57.158 47.619 25.78 23.42 45.59 3.86
2598 2908 8.896744 TGGAAAGATCAAATTATCACATCTGTC 58.103 33.333 0.00 0.00 29.96 3.51
2730 3040 1.511318 TTCAAACCGACATGGCACCG 61.511 55.000 0.00 0.00 43.94 4.94
2829 3139 3.489355 TGTTCAACTCATCACAATGCCT 58.511 40.909 0.00 0.00 32.58 4.75
3002 3314 9.271828 ACAAACATTCCAATCCAAATTAGTTTC 57.728 29.630 0.00 0.00 0.00 2.78
3008 3320 6.310941 TCCAATCCAAATTAGTTTCCTGTCA 58.689 36.000 0.00 0.00 0.00 3.58
3021 3333 9.787435 TTAGTTTCCTGTCACAAGTGTATTATT 57.213 29.630 0.00 0.00 0.00 1.40
3074 3386 0.037590 GCAATCCACCACCACCTACA 59.962 55.000 0.00 0.00 0.00 2.74
3078 3390 0.834687 TCCACCACCACCTACAGACC 60.835 60.000 0.00 0.00 0.00 3.85
3281 3602 2.040939 TGAGGTAACGGGTTCAAGTCA 58.959 47.619 0.00 0.00 46.39 3.41
3416 3745 1.702182 TTTTCAAGATGCTGGTGCCA 58.298 45.000 0.00 0.00 38.71 4.92
3425 3754 2.360350 CTGGTGCCATGGCGTTCT 60.360 61.111 30.87 0.00 45.51 3.01
3532 3861 8.757164 ATCGGAAAAATTTGAGACATAAAACC 57.243 30.769 0.00 0.00 0.00 3.27
3533 3862 7.717568 TCGGAAAAATTTGAGACATAAAACCA 58.282 30.769 0.00 0.00 0.00 3.67
3534 3863 8.364142 TCGGAAAAATTTGAGACATAAAACCAT 58.636 29.630 0.00 0.00 0.00 3.55
3535 3864 9.632807 CGGAAAAATTTGAGACATAAAACCATA 57.367 29.630 0.00 0.00 0.00 2.74
3543 3872 9.585099 TTTGAGACATAAAACCATATCAAATGC 57.415 29.630 0.00 0.00 32.24 3.56
3544 3873 8.523915 TGAGACATAAAACCATATCAAATGCT 57.476 30.769 0.00 0.00 0.00 3.79
3545 3874 8.623903 TGAGACATAAAACCATATCAAATGCTC 58.376 33.333 0.00 0.00 0.00 4.26
3561 3890 6.932400 TCAAATGCTCAAGATTCTTGCAAAAT 59.068 30.769 19.53 3.64 37.20 1.82
3562 3891 7.442969 TCAAATGCTCAAGATTCTTGCAAAATT 59.557 29.630 19.53 13.34 37.20 1.82
3581 3912 7.538334 GCAAAATTTCAGCCAAAAATAACATCC 59.462 33.333 4.66 0.00 0.00 3.51
3591 3922 4.762289 AAAATAACATCCGAGGAGCTCT 57.238 40.909 14.64 0.00 0.00 4.09
3598 3929 0.891373 TCCGAGGAGCTCTCACAAAG 59.109 55.000 14.64 0.00 42.55 2.77
3634 3966 6.974932 TCAATGCTTAAAAAGTGCACAAAA 57.025 29.167 21.04 4.52 39.63 2.44
3675 4007 0.243907 TTTTCGGTGAGAGCTCCTCG 59.756 55.000 10.93 9.50 44.92 4.63
3687 4020 4.003648 AGAGCTCCTCGGTGTTATTTTTG 58.996 43.478 10.93 0.00 35.36 2.44
3696 4029 5.848406 TCGGTGTTATTTTTGGCTGAAAAT 58.152 33.333 13.73 13.73 40.99 1.82
3709 4042 3.749609 GGCTGAAAATTTGCAAGATGCTT 59.250 39.130 0.00 0.00 45.31 3.91
3788 4168 0.835941 GACCATCCACTCTCATGGCT 59.164 55.000 0.00 0.00 43.16 4.75
3860 4240 6.919721 TGTGTTGGAAGCCAGTAAATAATTC 58.080 36.000 0.00 0.00 33.81 2.17
3862 4242 7.178274 TGTGTTGGAAGCCAGTAAATAATTCAT 59.822 33.333 0.00 0.00 33.81 2.57
3863 4243 8.682710 GTGTTGGAAGCCAGTAAATAATTCATA 58.317 33.333 0.00 0.00 33.81 2.15
3864 4244 8.682710 TGTTGGAAGCCAGTAAATAATTCATAC 58.317 33.333 0.00 0.00 33.81 2.39
3865 4245 7.490962 TGGAAGCCAGTAAATAATTCATACG 57.509 36.000 0.00 0.00 0.00 3.06
3866 4246 7.051623 TGGAAGCCAGTAAATAATTCATACGT 58.948 34.615 0.00 0.00 0.00 3.57
3867 4247 8.205512 TGGAAGCCAGTAAATAATTCATACGTA 58.794 33.333 0.00 0.00 0.00 3.57
3868 4248 8.493547 GGAAGCCAGTAAATAATTCATACGTAC 58.506 37.037 0.00 0.00 0.00 3.67
3869 4249 9.257651 GAAGCCAGTAAATAATTCATACGTACT 57.742 33.333 0.00 0.00 0.00 2.73
3870 4250 8.813643 AGCCAGTAAATAATTCATACGTACTC 57.186 34.615 0.00 0.00 0.00 2.59
3871 4251 7.871463 AGCCAGTAAATAATTCATACGTACTCC 59.129 37.037 0.00 0.00 0.00 3.85
3872 4252 7.117379 GCCAGTAAATAATTCATACGTACTCCC 59.883 40.741 0.00 0.00 0.00 4.30
3873 4253 8.365647 CCAGTAAATAATTCATACGTACTCCCT 58.634 37.037 0.00 0.00 0.00 4.20
3874 4254 9.408069 CAGTAAATAATTCATACGTACTCCCTC 57.592 37.037 0.00 0.00 0.00 4.30
3875 4255 9.364653 AGTAAATAATTCATACGTACTCCCTCT 57.635 33.333 0.00 0.00 0.00 3.69
3876 4256 9.408069 GTAAATAATTCATACGTACTCCCTCTG 57.592 37.037 0.00 0.00 0.00 3.35
3877 4257 7.598759 AATAATTCATACGTACTCCCTCTGT 57.401 36.000 0.00 0.00 0.00 3.41
3878 4258 5.517322 AATTCATACGTACTCCCTCTGTC 57.483 43.478 0.00 0.00 0.00 3.51
3879 4259 2.928334 TCATACGTACTCCCTCTGTCC 58.072 52.381 0.00 0.00 0.00 4.02
3880 4260 1.955080 CATACGTACTCCCTCTGTCCC 59.045 57.143 0.00 0.00 0.00 4.46
3881 4261 0.994247 TACGTACTCCCTCTGTCCCA 59.006 55.000 0.00 0.00 0.00 4.37
3882 4262 0.335361 ACGTACTCCCTCTGTCCCAT 59.665 55.000 0.00 0.00 0.00 4.00
3883 4263 1.567649 ACGTACTCCCTCTGTCCCATA 59.432 52.381 0.00 0.00 0.00 2.74
3884 4264 2.024655 ACGTACTCCCTCTGTCCCATAA 60.025 50.000 0.00 0.00 0.00 1.90
3885 4265 3.231818 CGTACTCCCTCTGTCCCATAAT 58.768 50.000 0.00 0.00 0.00 1.28
3886 4266 4.141088 ACGTACTCCCTCTGTCCCATAATA 60.141 45.833 0.00 0.00 0.00 0.98
3887 4267 5.017490 CGTACTCCCTCTGTCCCATAATAT 58.983 45.833 0.00 0.00 0.00 1.28
3888 4268 6.185511 CGTACTCCCTCTGTCCCATAATATA 58.814 44.000 0.00 0.00 0.00 0.86
3889 4269 6.662234 CGTACTCCCTCTGTCCCATAATATAA 59.338 42.308 0.00 0.00 0.00 0.98
3890 4270 7.148052 CGTACTCCCTCTGTCCCATAATATAAG 60.148 44.444 0.00 0.00 0.00 1.73
3891 4271 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
3892 4272 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
3893 4273 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
3894 4274 6.210784 TCCCTCTGTCCCATAATATAAGAACG 59.789 42.308 0.00 0.00 0.00 3.95
3895 4275 6.014499 CCCTCTGTCCCATAATATAAGAACGT 60.014 42.308 0.00 0.00 0.00 3.99
3896 4276 7.442656 CCTCTGTCCCATAATATAAGAACGTT 58.557 38.462 0.00 0.00 0.00 3.99
3897 4277 7.931948 CCTCTGTCCCATAATATAAGAACGTTT 59.068 37.037 0.46 0.00 0.00 3.60
3898 4278 9.326413 CTCTGTCCCATAATATAAGAACGTTTT 57.674 33.333 0.46 0.00 0.00 2.43
3899 4279 9.675464 TCTGTCCCATAATATAAGAACGTTTTT 57.325 29.630 9.22 9.22 0.00 1.94
3900 4280 9.716507 CTGTCCCATAATATAAGAACGTTTTTG 57.283 33.333 13.87 0.00 0.00 2.44
3901 4281 9.451002 TGTCCCATAATATAAGAACGTTTTTGA 57.549 29.630 13.87 2.81 0.00 2.69
3902 4282 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
3903 4283 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
3904 4284 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
3910 4290 7.781548 ATAAGAACGTTTTTGACACTACACT 57.218 32.000 13.87 0.00 0.00 3.55
3911 4291 8.876275 ATAAGAACGTTTTTGACACTACACTA 57.124 30.769 13.87 0.00 0.00 2.74
3912 4292 6.823678 AGAACGTTTTTGACACTACACTAG 57.176 37.500 0.46 0.00 0.00 2.57
3913 4293 6.335777 AGAACGTTTTTGACACTACACTAGT 58.664 36.000 0.46 0.00 40.28 2.57
3926 4306 6.579491 ACTACACTAGTGTCAAAAACGTTC 57.421 37.500 31.11 0.00 43.74 3.95
3927 4307 6.335777 ACTACACTAGTGTCAAAAACGTTCT 58.664 36.000 31.11 5.44 43.74 3.01
3928 4308 6.815142 ACTACACTAGTGTCAAAAACGTTCTT 59.185 34.615 31.11 4.99 43.74 2.52
3929 4309 7.975616 ACTACACTAGTGTCAAAAACGTTCTTA 59.024 33.333 31.11 8.36 43.74 2.10
3930 4310 7.781548 ACACTAGTGTCAAAAACGTTCTTAT 57.218 32.000 22.95 0.00 40.24 1.73
3931 4311 8.876275 ACACTAGTGTCAAAAACGTTCTTATA 57.124 30.769 22.95 0.00 40.24 0.98
3932 4312 9.485206 ACACTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 22.95 0.00 40.24 0.86
3938 4318 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
3939 4319 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
3940 4320 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
3941 4321 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
3942 4322 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
3943 4323 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3944 4324 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3945 4325 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3946 4326 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3947 4327 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3948 4328 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3974 4526 7.857734 ATAATGTTATGATTCACGTCACCAA 57.142 32.000 0.00 0.00 0.00 3.67
4099 4661 8.587952 AACACAAAATTACAAGAAATAGTGCC 57.412 30.769 0.00 0.00 0.00 5.01
4146 4710 0.587768 TCACAGCATGCTTTGACACG 59.412 50.000 28.29 14.02 42.53 4.49
4148 4712 0.308684 ACAGCATGCTTTGACACGTG 59.691 50.000 19.98 15.48 42.53 4.49
4220 4785 5.247862 AGTTTCCGAAAATACCCGTGTTAT 58.752 37.500 0.00 0.00 0.00 1.89
4266 4838 0.963962 CCTGATTGCTGGTGCTTGTT 59.036 50.000 0.00 0.00 40.48 2.83
4287 4859 9.840427 CTTGTTGGTTATAAGAGGTATTTTGTG 57.160 33.333 0.00 0.00 0.00 3.33
4337 5025 2.309458 TGGGGGTATAACCACAAGAACC 59.691 50.000 10.08 0.00 45.79 3.62
4346 5034 3.107642 ACCACAAGAACCAAGTCGTAG 57.892 47.619 0.00 0.00 0.00 3.51
4524 5212 1.799258 CTGCCAGCAACCTGTGAACC 61.799 60.000 0.00 0.00 37.38 3.62
4566 5254 3.574614 CCCTGTGCAAAGTTTTTATCCG 58.425 45.455 2.51 0.00 0.00 4.18
4599 5295 6.479990 TCTGTTTATCAAATGGCATCTAGTCG 59.520 38.462 0.00 0.00 0.00 4.18
4670 5366 3.550820 TGCTTTGAGCCTTTGACAGTTA 58.449 40.909 0.00 0.00 41.51 2.24
4770 5466 4.550577 TTATGGCATCATTAGTGTTGCG 57.449 40.909 1.65 0.00 46.94 4.85
4798 5494 4.665451 TGTTCATTCATGTGTCCAAGGAT 58.335 39.130 0.00 0.00 0.00 3.24
4808 5504 3.245229 TGTGTCCAAGGATAAGGCATGTT 60.245 43.478 0.00 0.00 0.00 2.71
4814 5510 3.627395 AGGATAAGGCATGTTGTTCGA 57.373 42.857 0.00 0.00 0.00 3.71
4920 5617 6.921857 CACGTCTTATATTTTGATACGGAGGT 59.078 38.462 0.00 0.00 33.44 3.85
4936 5633 4.762251 ACGGAGGTAGTACTAAAGAACGTT 59.238 41.667 3.61 0.00 0.00 3.99
4939 5636 6.089476 GGAGGTAGTACTAAAGAACGTTGTC 58.911 44.000 5.00 0.00 0.00 3.18
4941 5638 6.675987 AGGTAGTACTAAAGAACGTTGTCAG 58.324 40.000 5.00 5.47 0.00 3.51
4961 5658 5.915196 GTCAGAACTCAATACAAAACCAAGC 59.085 40.000 0.00 0.00 0.00 4.01
4963 5660 6.995686 TCAGAACTCAATACAAAACCAAGCTA 59.004 34.615 0.00 0.00 0.00 3.32
5015 5712 7.306515 GCGTTTTGCATTATGTTTTTCTCTTGA 60.307 33.333 0.00 0.00 45.45 3.02
5039 5736 5.464389 AGAAAGTTGCTTGCATTCAAATCAC 59.536 36.000 9.23 0.00 0.00 3.06
5050 5747 6.572153 GCATTCAAATCACGAAATAATGCA 57.428 33.333 11.15 0.00 44.33 3.96
5056 5753 8.226543 TCAAATCACGAAATAATGCAAAGTTC 57.773 30.769 0.00 0.00 0.00 3.01
5063 5760 6.016276 ACGAAATAATGCAAAGTTCTTGACCT 60.016 34.615 9.86 0.00 0.00 3.85
5072 5769 2.755650 AGTTCTTGACCTGTACAAGCG 58.244 47.619 0.00 0.00 42.76 4.68
5085 5782 1.164041 ACAAGCGCACCCTAACACAC 61.164 55.000 11.47 0.00 0.00 3.82
5096 5793 2.350388 CCCTAACACACGCACAATGAAC 60.350 50.000 0.00 0.00 0.00 3.18
5111 5808 6.404074 GCACAATGAACCAGGAAAATAGAGAG 60.404 42.308 0.00 0.00 0.00 3.20
5126 5825 5.763876 ATAGAGAGCACCCTAAAACAACT 57.236 39.130 0.00 0.00 0.00 3.16
5134 5833 7.942894 AGAGCACCCTAAAACAACTAGTAAAAT 59.057 33.333 0.00 0.00 0.00 1.82
5139 5838 9.948964 ACCCTAAAACAACTAGTAAAATACGAT 57.051 29.630 0.00 0.00 0.00 3.73
5145 5844 8.699283 AACAACTAGTAAAATACGATGACCTC 57.301 34.615 0.00 0.00 0.00 3.85
5146 5845 8.064336 ACAACTAGTAAAATACGATGACCTCT 57.936 34.615 0.00 0.00 0.00 3.69
5148 5847 7.040473 ACTAGTAAAATACGATGACCTCTGG 57.960 40.000 0.00 0.00 0.00 3.86
5153 5852 2.145397 TACGATGACCTCTGGAGCTT 57.855 50.000 0.00 0.00 0.00 3.74
5154 5853 1.270907 ACGATGACCTCTGGAGCTTT 58.729 50.000 0.00 0.00 0.00 3.51
5167 5866 3.084039 TGGAGCTTTGTGTCATCATTCC 58.916 45.455 0.00 0.00 0.00 3.01
5180 5879 4.022068 GTCATCATTCCTGAACCTTGCAAA 60.022 41.667 0.00 0.00 34.37 3.68
5187 5886 2.430332 CCTGAACCTTGCAAAAAGACCA 59.570 45.455 0.00 0.00 0.00 4.02
5188 5887 3.118811 CCTGAACCTTGCAAAAAGACCAA 60.119 43.478 0.00 0.00 0.00 3.67
5209 5908 5.393787 CCAATGCAATACAAGACTCTGCAAT 60.394 40.000 0.00 0.00 45.37 3.56
5242 5941 4.819105 AGGTCATCATCTTTAACCACGA 57.181 40.909 0.00 0.00 32.25 4.35
5249 5948 8.612619 GTCATCATCTTTAACCACGACATAATT 58.387 33.333 0.00 0.00 0.00 1.40
5251 5950 6.781138 TCATCTTTAACCACGACATAATTGC 58.219 36.000 0.00 0.00 0.00 3.56
5253 5952 5.004448 TCTTTAACCACGACATAATTGCCA 58.996 37.500 0.00 0.00 0.00 4.92
5256 5955 0.376852 CCACGACATAATTGCCACCG 59.623 55.000 0.00 0.00 0.00 4.94
5265 5964 1.181098 AATTGCCACCGCTTTGCTCT 61.181 50.000 0.00 0.00 35.36 4.09
5266 5965 1.589716 ATTGCCACCGCTTTGCTCTC 61.590 55.000 0.00 0.00 35.36 3.20
5275 5974 2.294512 CCGCTTTGCTCTCCTTTTCTTT 59.705 45.455 0.00 0.00 0.00 2.52
5280 5979 1.956477 TGCTCTCCTTTTCTTTGCACC 59.044 47.619 0.00 0.00 0.00 5.01
5298 5997 2.740714 CGGCGCCGAAAAGAGAAGG 61.741 63.158 44.86 9.41 42.83 3.46
5306 6005 2.544267 CCGAAAAGAGAAGGACACACAC 59.456 50.000 0.00 0.00 0.00 3.82
5307 6006 3.194861 CGAAAAGAGAAGGACACACACA 58.805 45.455 0.00 0.00 0.00 3.72
5329 6028 0.973496 TGCATCCAACATGCCTGCAT 60.973 50.000 0.00 0.00 43.94 3.96
5338 6037 1.035385 CATGCCTGCATCAGCCTTCA 61.035 55.000 0.70 0.00 41.13 3.02
5349 6048 1.133513 TCAGCCTTCACCATTTGTGGT 60.134 47.619 0.00 0.00 45.48 4.16
5350 6049 2.107378 TCAGCCTTCACCATTTGTGGTA 59.893 45.455 0.00 0.00 45.48 3.25
5351 6050 3.091545 CAGCCTTCACCATTTGTGGTAT 58.908 45.455 0.00 0.00 45.48 2.73
5352 6051 4.018870 TCAGCCTTCACCATTTGTGGTATA 60.019 41.667 0.00 0.00 45.48 1.47
5353 6052 4.336433 CAGCCTTCACCATTTGTGGTATAG 59.664 45.833 0.00 1.26 45.48 1.31
5354 6053 3.066760 GCCTTCACCATTTGTGGTATAGC 59.933 47.826 0.00 0.00 45.48 2.97
5355 6054 4.526970 CCTTCACCATTTGTGGTATAGCT 58.473 43.478 3.20 0.00 45.48 3.32
5356 6055 4.336433 CCTTCACCATTTGTGGTATAGCTG 59.664 45.833 0.00 0.00 45.48 4.24
5357 6056 4.568072 TCACCATTTGTGGTATAGCTGT 57.432 40.909 0.00 0.00 45.48 4.40
5358 6057 4.513442 TCACCATTTGTGGTATAGCTGTC 58.487 43.478 0.00 0.00 45.48 3.51
5359 6058 3.627577 CACCATTTGTGGTATAGCTGTCC 59.372 47.826 0.00 0.00 40.85 4.02
5360 6059 3.265737 ACCATTTGTGGTATAGCTGTCCA 59.734 43.478 0.00 0.00 41.04 4.02
5361 6060 4.263727 ACCATTTGTGGTATAGCTGTCCAA 60.264 41.667 0.00 0.00 41.04 3.53
5362 6061 4.704540 CCATTTGTGGTATAGCTGTCCAAA 59.295 41.667 0.00 7.54 32.82 3.28
5363 6062 5.393027 CCATTTGTGGTATAGCTGTCCAAAC 60.393 44.000 0.00 0.00 32.82 2.93
5364 6063 2.967362 TGTGGTATAGCTGTCCAAACG 58.033 47.619 0.00 0.00 32.82 3.60
5365 6064 2.277084 GTGGTATAGCTGTCCAAACGG 58.723 52.381 0.00 0.00 32.82 4.44
5388 6087 4.082523 CACGACACGGCCCATCCT 62.083 66.667 0.00 0.00 0.00 3.24
5389 6088 2.363276 ACGACACGGCCCATCCTA 60.363 61.111 0.00 0.00 0.00 2.94
5390 6089 1.985662 ACGACACGGCCCATCCTAA 60.986 57.895 0.00 0.00 0.00 2.69
5391 6090 1.335132 ACGACACGGCCCATCCTAAT 61.335 55.000 0.00 0.00 0.00 1.73
5392 6091 0.600255 CGACACGGCCCATCCTAATC 60.600 60.000 0.00 0.00 0.00 1.75
5393 6092 0.600255 GACACGGCCCATCCTAATCG 60.600 60.000 0.00 0.00 0.00 3.34
5394 6093 1.335132 ACACGGCCCATCCTAATCGT 61.335 55.000 0.00 0.00 0.00 3.73
5395 6094 0.179056 CACGGCCCATCCTAATCGTT 60.179 55.000 0.00 0.00 0.00 3.85
5396 6095 0.106149 ACGGCCCATCCTAATCGTTC 59.894 55.000 0.00 0.00 0.00 3.95
5397 6096 0.602905 CGGCCCATCCTAATCGTTCC 60.603 60.000 0.00 0.00 0.00 3.62
5398 6097 0.765510 GGCCCATCCTAATCGTTCCT 59.234 55.000 0.00 0.00 0.00 3.36
5399 6098 1.543429 GGCCCATCCTAATCGTTCCTG 60.543 57.143 0.00 0.00 0.00 3.86
5400 6099 1.543429 GCCCATCCTAATCGTTCCTGG 60.543 57.143 0.00 0.00 0.00 4.45
5401 6100 1.543429 CCCATCCTAATCGTTCCTGGC 60.543 57.143 0.00 0.00 0.00 4.85
5402 6101 1.140852 CCATCCTAATCGTTCCTGGCA 59.859 52.381 0.00 0.00 0.00 4.92
5403 6102 2.213499 CATCCTAATCGTTCCTGGCAC 58.787 52.381 0.00 0.00 0.00 5.01
5404 6103 0.174845 TCCTAATCGTTCCTGGCACG 59.825 55.000 12.75 12.75 39.08 5.34
5405 6104 0.810031 CCTAATCGTTCCTGGCACGG 60.810 60.000 18.32 2.72 38.23 4.94
5406 6105 1.429148 CTAATCGTTCCTGGCACGGC 61.429 60.000 18.32 0.00 38.23 5.68
5407 6106 1.895020 TAATCGTTCCTGGCACGGCT 61.895 55.000 18.32 8.63 38.23 5.52
5408 6107 3.665675 ATCGTTCCTGGCACGGCTC 62.666 63.158 18.32 0.00 38.23 4.70
5428 6127 2.124901 CCCGCCGAGGCACAATTA 60.125 61.111 15.03 0.00 42.06 1.40
5429 6128 1.525995 CCCGCCGAGGCACAATTAT 60.526 57.895 15.03 0.00 42.06 1.28
5430 6129 1.101049 CCCGCCGAGGCACAATTATT 61.101 55.000 15.03 0.00 42.06 1.40
5431 6130 1.588674 CCGCCGAGGCACAATTATTA 58.411 50.000 15.03 0.00 42.06 0.98
5432 6131 2.151202 CCGCCGAGGCACAATTATTAT 58.849 47.619 15.03 0.00 42.06 1.28
5433 6132 3.331150 CCGCCGAGGCACAATTATTATA 58.669 45.455 15.03 0.00 42.06 0.98
5434 6133 3.124636 CCGCCGAGGCACAATTATTATAC 59.875 47.826 15.03 0.00 42.06 1.47
5435 6134 3.743911 CGCCGAGGCACAATTATTATACA 59.256 43.478 15.03 0.00 42.06 2.29
5436 6135 4.143115 CGCCGAGGCACAATTATTATACAG 60.143 45.833 15.03 0.00 42.06 2.74
5437 6136 4.154195 GCCGAGGCACAATTATTATACAGG 59.846 45.833 9.58 0.00 41.49 4.00
5438 6137 4.154195 CCGAGGCACAATTATTATACAGGC 59.846 45.833 0.00 0.00 0.00 4.85
5439 6138 4.154195 CGAGGCACAATTATTATACAGGCC 59.846 45.833 0.00 0.00 39.14 5.19
5440 6139 4.072131 AGGCACAATTATTATACAGGCCG 58.928 43.478 0.00 0.00 43.42 6.13
5441 6140 3.818773 GGCACAATTATTATACAGGCCGT 59.181 43.478 0.00 0.49 0.00 5.68
5442 6141 4.320202 GGCACAATTATTATACAGGCCGTG 60.320 45.833 10.01 5.68 0.00 4.94
5443 6142 4.783242 CACAATTATTATACAGGCCGTGC 58.217 43.478 10.01 0.00 0.00 5.34
5495 6194 3.419793 GGCACAGCCCATATGCTAA 57.580 52.632 0.00 0.00 44.06 3.09
5496 6195 1.915141 GGCACAGCCCATATGCTAAT 58.085 50.000 0.00 0.00 44.06 1.73
5497 6196 1.815003 GGCACAGCCCATATGCTAATC 59.185 52.381 0.00 0.00 44.06 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.733387 ATTCATCCCCCAGCATCCCC 61.733 60.000 0.00 0.00 0.00 4.81
1 2 0.189327 AATTCATCCCCCAGCATCCC 59.811 55.000 0.00 0.00 0.00 3.85
2 3 1.133388 TGAATTCATCCCCCAGCATCC 60.133 52.381 3.38 0.00 0.00 3.51
3 4 2.369983 TGAATTCATCCCCCAGCATC 57.630 50.000 3.38 0.00 0.00 3.91
4 5 2.852714 TTGAATTCATCCCCCAGCAT 57.147 45.000 9.40 0.00 0.00 3.79
5 6 2.042842 TCTTTGAATTCATCCCCCAGCA 59.957 45.455 9.40 0.00 0.00 4.41
6 7 2.692041 CTCTTTGAATTCATCCCCCAGC 59.308 50.000 9.40 0.00 0.00 4.85
7 8 3.294214 CCTCTTTGAATTCATCCCCCAG 58.706 50.000 9.40 0.36 0.00 4.45
8 9 2.024080 CCCTCTTTGAATTCATCCCCCA 60.024 50.000 9.40 0.00 0.00 4.96
9 10 2.670939 CCCTCTTTGAATTCATCCCCC 58.329 52.381 9.40 0.00 0.00 5.40
10 11 2.244769 TCCCCTCTTTGAATTCATCCCC 59.755 50.000 9.40 0.00 0.00 4.81
11 12 3.669939 TCCCCTCTTTGAATTCATCCC 57.330 47.619 9.40 0.00 0.00 3.85
12 13 7.846101 ATAAATCCCCTCTTTGAATTCATCC 57.154 36.000 9.40 0.00 0.00 3.51
13 14 9.538508 CAAATAAATCCCCTCTTTGAATTCATC 57.461 33.333 9.40 0.00 0.00 2.92
14 15 9.270707 TCAAATAAATCCCCTCTTTGAATTCAT 57.729 29.630 9.40 0.00 34.04 2.57
15 16 8.663209 TCAAATAAATCCCCTCTTTGAATTCA 57.337 30.769 3.38 3.38 34.04 2.57
16 17 8.753133 ACTCAAATAAATCCCCTCTTTGAATTC 58.247 33.333 0.00 0.00 35.93 2.17
17 18 8.534496 CACTCAAATAAATCCCCTCTTTGAATT 58.466 33.333 0.00 0.00 35.93 2.17
18 19 7.895429 TCACTCAAATAAATCCCCTCTTTGAAT 59.105 33.333 0.00 0.00 35.93 2.57
19 20 7.237982 TCACTCAAATAAATCCCCTCTTTGAA 58.762 34.615 0.00 0.00 35.93 2.69
20 21 6.789268 TCACTCAAATAAATCCCCTCTTTGA 58.211 36.000 0.00 0.00 35.29 2.69
21 22 7.039784 TGTTCACTCAAATAAATCCCCTCTTTG 60.040 37.037 0.00 0.00 0.00 2.77
22 23 7.010160 TGTTCACTCAAATAAATCCCCTCTTT 58.990 34.615 0.00 0.00 0.00 2.52
23 24 6.552008 TGTTCACTCAAATAAATCCCCTCTT 58.448 36.000 0.00 0.00 0.00 2.85
24 25 6.139679 TGTTCACTCAAATAAATCCCCTCT 57.860 37.500 0.00 0.00 0.00 3.69
25 26 6.834168 TTGTTCACTCAAATAAATCCCCTC 57.166 37.500 0.00 0.00 0.00 4.30
26 27 7.610580 TTTTGTTCACTCAAATAAATCCCCT 57.389 32.000 0.00 0.00 37.20 4.79
27 28 8.255394 CATTTTGTTCACTCAAATAAATCCCC 57.745 34.615 0.00 0.00 37.20 4.81
292 293 1.065709 TGTCTTCTTAATGTCGCCCCC 60.066 52.381 0.00 0.00 0.00 5.40
293 294 2.280628 CTGTCTTCTTAATGTCGCCCC 58.719 52.381 0.00 0.00 0.00 5.80
294 295 2.673368 CACTGTCTTCTTAATGTCGCCC 59.327 50.000 0.00 0.00 0.00 6.13
295 296 3.123621 CACACTGTCTTCTTAATGTCGCC 59.876 47.826 0.00 0.00 0.00 5.54
296 297 3.987868 TCACACTGTCTTCTTAATGTCGC 59.012 43.478 0.00 0.00 0.00 5.19
297 298 6.712241 AATCACACTGTCTTCTTAATGTCG 57.288 37.500 0.00 0.00 0.00 4.35
323 324 6.664428 TCCGTATGACATCCATTCTTGATA 57.336 37.500 0.00 0.00 36.71 2.15
340 341 2.493675 AGATGCTCGCATACATCCGTAT 59.506 45.455 4.10 0.00 43.01 3.06
356 361 4.635765 TGAGTATTGTACAAAGGCAGATGC 59.364 41.667 13.23 0.00 41.14 3.91
358 363 5.804639 TGTGAGTATTGTACAAAGGCAGAT 58.195 37.500 13.23 0.00 0.00 2.90
359 364 5.222079 TGTGAGTATTGTACAAAGGCAGA 57.778 39.130 13.23 4.82 0.00 4.26
360 365 5.940192 TTGTGAGTATTGTACAAAGGCAG 57.060 39.130 13.23 0.00 31.95 4.85
410 420 6.088483 CGTGAATGATTCAAATGACAACAAGG 59.912 38.462 9.78 0.00 42.15 3.61
411 421 6.088483 CCGTGAATGATTCAAATGACAACAAG 59.912 38.462 9.78 0.00 42.15 3.16
442 453 3.400255 CATGATCGAGACATTGCAGGAT 58.600 45.455 5.35 0.00 0.00 3.24
479 490 3.522731 CTCCCCGCACTCTCTCCG 61.523 72.222 0.00 0.00 0.00 4.63
518 529 1.359848 CCATCCGGTTGAAGACTTCG 58.640 55.000 14.27 0.00 0.00 3.79
578 636 1.144093 TCCGTGGGTTTGATGAAGGTT 59.856 47.619 0.00 0.00 0.00 3.50
579 637 0.768622 TCCGTGGGTTTGATGAAGGT 59.231 50.000 0.00 0.00 0.00 3.50
620 688 8.134905 AGTTTTGATTGAAAGAGTGCATTTTC 57.865 30.769 11.94 11.94 34.64 2.29
679 747 5.593909 TGGTGAGATGGTGGCTTTATTAATG 59.406 40.000 0.00 0.00 0.00 1.90
689 757 1.589716 GCTTGTGGTGAGATGGTGGC 61.590 60.000 0.00 0.00 0.00 5.01
735 803 3.426323 GCGGAGTATTTTTAGTGCAAGC 58.574 45.455 0.00 0.00 0.00 4.01
775 843 3.249973 GAACGAACTTGCCCGGCAC 62.250 63.158 13.00 0.00 38.71 5.01
824 902 3.942439 GGGTCTAGGCATCCCGGC 61.942 72.222 0.00 0.00 41.61 6.13
836 914 3.063084 GGAGACAGCGACGGGTCT 61.063 66.667 0.00 0.00 46.51 3.85
873 951 2.269241 GGAAAGCGAGAGTGGGGG 59.731 66.667 0.00 0.00 0.00 5.40
905 983 2.802346 CTTGCGTCGCGTTGCTTCTC 62.802 60.000 21.79 0.31 0.00 2.87
936 1014 4.935495 CGTGTGGTGGCTGGCTGT 62.935 66.667 2.00 0.00 0.00 4.40
1329 1415 1.745489 GGACCTACGCCAAGCCTTG 60.745 63.158 0.00 0.00 0.00 3.61
1331 1417 3.771160 CGGACCTACGCCAAGCCT 61.771 66.667 0.00 0.00 0.00 4.58
1332 1418 2.973180 GATCGGACCTACGCCAAGCC 62.973 65.000 0.00 0.00 0.00 4.35
1336 1426 1.379443 ACAGATCGGACCTACGCCA 60.379 57.895 0.00 0.00 0.00 5.69
1337 1427 1.065928 CACAGATCGGACCTACGCC 59.934 63.158 0.00 0.00 0.00 5.68
1374 1470 4.596643 AGATCCCTAACTTGCATGCTATCT 59.403 41.667 20.33 5.56 0.00 1.98
1380 1476 5.431765 ACAAGTAGATCCCTAACTTGCATG 58.568 41.667 19.66 0.00 37.43 4.06
1389 1485 6.127101 TCTGAAATCGACAAGTAGATCCCTA 58.873 40.000 0.00 0.00 0.00 3.53
1427 1523 1.000618 TGGTACATCCGCACACGTTTA 59.999 47.619 0.00 0.00 39.52 2.01
1487 1587 6.899393 ATTTAGCAATCAGGTCTCAAAACA 57.101 33.333 0.00 0.00 0.00 2.83
1500 1600 6.128742 CCAACAAACTCTGCAATTTAGCAATC 60.129 38.462 0.00 0.00 45.13 2.67
1532 1632 3.788227 TGCTTATGTTTCCACTGGAGT 57.212 42.857 0.00 0.00 31.21 3.85
1533 1633 4.074970 AGTTGCTTATGTTTCCACTGGAG 58.925 43.478 0.00 0.00 31.21 3.86
1534 1634 4.098914 AGTTGCTTATGTTTCCACTGGA 57.901 40.909 0.00 0.00 0.00 3.86
1535 1635 4.853924 AAGTTGCTTATGTTTCCACTGG 57.146 40.909 0.00 0.00 0.00 4.00
1576 1677 9.537192 AGCTGTTTAAAACGTATGCATAGTATA 57.463 29.630 6.67 3.03 0.00 1.47
1667 1768 8.702819 TCCATGATCAGTCATCAGATATATTCC 58.297 37.037 0.09 0.00 45.11 3.01
1695 1979 0.973632 ACGTATCAGGGTGCAACTCA 59.026 50.000 0.00 0.00 42.69 3.41
1743 2027 7.996644 TGGAAATATTCAAGTTCCCATAGTACC 59.003 37.037 2.15 0.00 40.16 3.34
1880 2167 3.635373 AGGAACTCGTGTGAACTAAGTGA 59.365 43.478 0.00 0.00 0.00 3.41
1881 2168 3.978687 AGGAACTCGTGTGAACTAAGTG 58.021 45.455 0.00 0.00 0.00 3.16
1897 2184 5.242838 CAGAGGGAGTGTATATCAGAGGAAC 59.757 48.000 0.00 0.00 0.00 3.62
1898 2185 5.103473 ACAGAGGGAGTGTATATCAGAGGAA 60.103 44.000 0.00 0.00 0.00 3.36
1899 2186 4.417183 ACAGAGGGAGTGTATATCAGAGGA 59.583 45.833 0.00 0.00 0.00 3.71
1902 2189 7.583625 TCTTTACAGAGGGAGTGTATATCAGA 58.416 38.462 0.00 0.00 30.54 3.27
1903 2190 7.825331 TCTTTACAGAGGGAGTGTATATCAG 57.175 40.000 0.00 0.00 30.54 2.90
1932 2219 9.983024 CCTCTCAGAGGGAGTATATATTTCTTA 57.017 37.037 13.74 0.00 45.43 2.10
1933 2220 8.893563 CCTCTCAGAGGGAGTATATATTTCTT 57.106 38.462 13.74 0.00 45.43 2.52
1949 2236 5.362430 ACTTAAGCATTACTCCCTCTCAGAG 59.638 44.000 1.29 0.00 37.39 3.35
1950 2237 5.273208 ACTTAAGCATTACTCCCTCTCAGA 58.727 41.667 1.29 0.00 0.00 3.27
1951 2238 5.606348 ACTTAAGCATTACTCCCTCTCAG 57.394 43.478 1.29 0.00 0.00 3.35
1952 2239 5.104900 GGAACTTAAGCATTACTCCCTCTCA 60.105 44.000 1.29 0.00 0.00 3.27
1953 2240 5.129650 AGGAACTTAAGCATTACTCCCTCTC 59.870 44.000 1.29 0.00 27.25 3.20
1954 2241 5.033522 AGGAACTTAAGCATTACTCCCTCT 58.966 41.667 1.29 0.00 27.25 3.69
1983 2270 5.518848 TTTCATGAAGACTGCACAACATT 57.481 34.783 8.41 0.00 0.00 2.71
1984 2271 5.163530 TGTTTTCATGAAGACTGCACAACAT 60.164 36.000 24.64 0.00 0.00 2.71
2042 2335 2.642311 TGAACTCCAATGCAGAACCCTA 59.358 45.455 0.00 0.00 0.00 3.53
2068 2361 3.540314 TGCCTTTTTGCATTCACAACT 57.460 38.095 0.00 0.00 36.04 3.16
2077 2370 2.011046 GCAACCACTTGCCTTTTTGCA 61.011 47.619 0.00 0.00 46.27 4.08
2256 2549 2.171448 AGAATACCTTGCCCAGTGCTAG 59.829 50.000 0.00 0.00 41.74 3.42
2311 2621 8.656849 GGTAGTACTTGATAACATTCAACACTG 58.343 37.037 0.00 0.00 32.33 3.66
2340 2650 4.748892 ACTGTGACACTCTTTATGGATCG 58.251 43.478 7.20 0.00 0.00 3.69
2366 2676 6.702716 TTAGTTTTGAACTGGGGTTAGTTG 57.297 37.500 3.70 0.00 42.84 3.16
2368 2678 7.064229 TGAATTAGTTTTGAACTGGGGTTAGT 58.936 34.615 3.70 0.00 42.84 2.24
2369 2679 7.519032 TGAATTAGTTTTGAACTGGGGTTAG 57.481 36.000 3.70 0.00 42.84 2.34
2398 2708 2.675844 CCGATCCAAAATAACTGTCGCA 59.324 45.455 0.00 0.00 0.00 5.10
2418 2728 6.190346 TCAGAACTAGATAGTACTCCCTCC 57.810 45.833 0.00 0.00 34.99 4.30
2466 2776 4.885907 AGTTATTCAGATCATGTGGCAAGG 59.114 41.667 0.00 0.00 0.00 3.61
2478 2788 9.466497 TTCCAGCATTAAAGAAGTTATTCAGAT 57.534 29.630 0.00 0.00 37.94 2.90
2568 2878 9.334947 GATGTGATAATTTGATCTTTCCAGAGA 57.665 33.333 0.00 0.00 30.36 3.10
2730 3040 1.432514 TCTCGTTGCTGTGCATCTTC 58.567 50.000 0.00 0.00 38.76 2.87
2829 3139 5.362143 TGACATTTTGGTGATGACTGGAAAA 59.638 36.000 0.00 0.00 0.00 2.29
2869 3180 7.892241 AGCATTAAGACATATTAGCCCATGAAT 59.108 33.333 0.00 0.00 0.00 2.57
2870 3181 7.233632 AGCATTAAGACATATTAGCCCATGAA 58.766 34.615 0.00 0.00 0.00 2.57
2890 3201 6.774656 CCTAGGGAAGTTAATCATCAAGCATT 59.225 38.462 0.00 0.00 0.00 3.56
2979 3291 8.096414 CAGGAAACTAATTTGGATTGGAATGTT 58.904 33.333 0.00 0.00 40.21 2.71
3002 3314 7.615582 ATGTGAATAATACACTTGTGACAGG 57.384 36.000 7.83 0.00 38.81 4.00
3074 3386 4.319177 CGAGAACAGAAAAATGAGGGTCT 58.681 43.478 0.00 0.00 0.00 3.85
3078 3390 5.008613 TCAAACCGAGAACAGAAAAATGAGG 59.991 40.000 0.00 0.00 0.00 3.86
3191 3510 6.599244 CCAGCATCTTGAAAATAGGTTACTCA 59.401 38.462 0.00 0.00 0.00 3.41
3267 3588 2.621526 GTTTCCATGACTTGAACCCGTT 59.378 45.455 0.00 0.00 0.00 4.44
3281 3602 2.309613 TCTGCAACAAGCTGTTTCCAT 58.690 42.857 0.00 0.00 45.94 3.41
3364 3693 2.434359 GCACGTAGCTCCCGCTTT 60.434 61.111 5.69 0.00 46.47 3.51
3416 3745 1.679032 GGCTACTTTCCAGAACGCCAT 60.679 52.381 0.00 0.00 36.16 4.40
3425 3754 2.753452 CGAGAGTAGTGGCTACTTTCCA 59.247 50.000 8.46 0.00 45.90 3.53
3509 3838 7.938563 TGGTTTTATGTCTCAAATTTTTCCG 57.061 32.000 0.00 0.00 0.00 4.30
3530 3859 7.683704 GCAAGAATCTTGAGCATTTGATATGGT 60.684 37.037 25.54 0.00 0.00 3.55
3531 3860 6.641314 GCAAGAATCTTGAGCATTTGATATGG 59.359 38.462 25.54 0.00 0.00 2.74
3532 3861 7.200455 TGCAAGAATCTTGAGCATTTGATATG 58.800 34.615 25.54 0.00 0.00 1.78
3533 3862 7.342769 TGCAAGAATCTTGAGCATTTGATAT 57.657 32.000 25.54 0.00 0.00 1.63
3534 3863 6.762702 TGCAAGAATCTTGAGCATTTGATA 57.237 33.333 25.54 0.00 0.00 2.15
3535 3864 5.654603 TGCAAGAATCTTGAGCATTTGAT 57.345 34.783 25.54 0.00 0.00 2.57
3536 3865 5.456548 TTGCAAGAATCTTGAGCATTTGA 57.543 34.783 25.54 0.77 34.87 2.69
3537 3866 6.533819 TTTTGCAAGAATCTTGAGCATTTG 57.466 33.333 25.54 0.00 34.87 2.32
3538 3867 7.739498 AATTTTGCAAGAATCTTGAGCATTT 57.261 28.000 25.54 10.31 34.87 2.32
3539 3868 7.442969 TGAAATTTTGCAAGAATCTTGAGCATT 59.557 29.630 25.54 13.69 34.87 3.56
3540 3869 6.932400 TGAAATTTTGCAAGAATCTTGAGCAT 59.068 30.769 25.54 8.93 34.87 3.79
3541 3870 6.282167 TGAAATTTTGCAAGAATCTTGAGCA 58.718 32.000 25.54 14.73 0.00 4.26
3542 3871 6.617953 GCTGAAATTTTGCAAGAATCTTGAGC 60.618 38.462 25.54 17.00 0.00 4.26
3543 3872 6.128634 GGCTGAAATTTTGCAAGAATCTTGAG 60.129 38.462 25.54 11.71 0.00 3.02
3544 3873 5.697633 GGCTGAAATTTTGCAAGAATCTTGA 59.302 36.000 25.54 8.82 0.00 3.02
3545 3874 5.467399 TGGCTGAAATTTTGCAAGAATCTTG 59.533 36.000 18.02 18.02 0.00 3.02
3561 3890 5.336372 CCTCGGATGTTATTTTTGGCTGAAA 60.336 40.000 0.00 0.00 0.00 2.69
3562 3891 4.157656 CCTCGGATGTTATTTTTGGCTGAA 59.842 41.667 0.00 0.00 0.00 3.02
3581 3912 2.732412 TTCTTTGTGAGAGCTCCTCG 57.268 50.000 10.93 0.00 44.92 4.63
3604 3936 8.711457 GTGCACTTTTTAAGCATTGATATTGTT 58.289 29.630 10.32 0.00 40.78 2.83
3606 3938 8.242085 TGTGCACTTTTTAAGCATTGATATTG 57.758 30.769 19.41 0.00 40.78 1.90
3661 3993 1.536943 AACACCGAGGAGCTCTCACC 61.537 60.000 14.64 0.00 42.55 4.02
3662 3994 1.174783 TAACACCGAGGAGCTCTCAC 58.825 55.000 14.64 4.59 42.55 3.51
3675 4007 6.636447 GCAAATTTTCAGCCAAAAATAACACC 59.364 34.615 6.97 0.00 37.75 4.16
3687 4020 3.734776 GCATCTTGCAAATTTTCAGCC 57.265 42.857 0.00 0.00 44.26 4.85
3709 4042 8.408043 AGACATCAAACCTTATCAAATGTTCA 57.592 30.769 0.00 0.00 0.00 3.18
3771 4151 2.092538 AGAAAGCCATGAGAGTGGATGG 60.093 50.000 0.00 0.00 42.02 3.51
3842 4222 7.492352 ACGTATGAATTATTTACTGGCTTCC 57.508 36.000 0.00 0.00 0.00 3.46
3860 4240 1.955080 GGGACAGAGGGAGTACGTATG 59.045 57.143 0.00 0.00 32.75 2.39
3862 4242 0.994247 TGGGACAGAGGGAGTACGTA 59.006 55.000 0.00 0.00 0.00 3.57
3863 4243 1.772308 TGGGACAGAGGGAGTACGT 59.228 57.895 0.00 0.00 0.00 3.57
3864 4244 4.757773 TGGGACAGAGGGAGTACG 57.242 61.111 0.00 0.00 0.00 3.67
3876 4256 9.712359 GTCAAAAACGTTCTTATATTATGGGAC 57.288 33.333 0.00 0.00 0.00 4.46
3877 4257 9.451002 TGTCAAAAACGTTCTTATATTATGGGA 57.549 29.630 0.00 0.00 0.00 4.37
3878 4258 9.498307 GTGTCAAAAACGTTCTTATATTATGGG 57.502 33.333 0.00 0.00 0.00 4.00
3884 4264 9.485206 AGTGTAGTGTCAAAAACGTTCTTATAT 57.515 29.630 0.00 0.00 0.00 0.86
3885 4265 8.876275 AGTGTAGTGTCAAAAACGTTCTTATA 57.124 30.769 0.00 0.00 0.00 0.98
3886 4266 7.781548 AGTGTAGTGTCAAAAACGTTCTTAT 57.218 32.000 0.00 0.00 0.00 1.73
3887 4267 7.975616 ACTAGTGTAGTGTCAAAAACGTTCTTA 59.024 33.333 0.00 0.00 37.69 2.10
3888 4268 6.815142 ACTAGTGTAGTGTCAAAAACGTTCTT 59.185 34.615 0.00 0.00 37.69 2.52
3889 4269 6.335777 ACTAGTGTAGTGTCAAAAACGTTCT 58.664 36.000 0.00 0.00 37.69 3.01
3890 4270 6.579491 ACTAGTGTAGTGTCAAAAACGTTC 57.421 37.500 0.00 0.00 37.69 3.95
3903 4283 6.335777 AGAACGTTTTTGACACTAGTGTAGT 58.664 36.000 27.98 15.35 45.05 2.73
3904 4284 6.823678 AGAACGTTTTTGACACTAGTGTAG 57.176 37.500 27.98 14.79 45.05 2.74
3905 4285 8.876275 ATAAGAACGTTTTTGACACTAGTGTA 57.124 30.769 27.98 11.50 45.05 2.90
3912 4292 9.498307 CCCATAATATAAGAACGTTTTTGACAC 57.502 33.333 13.87 0.00 0.00 3.67
3913 4293 9.451002 TCCCATAATATAAGAACGTTTTTGACA 57.549 29.630 13.87 0.01 0.00 3.58
3914 4294 9.712359 GTCCCATAATATAAGAACGTTTTTGAC 57.288 33.333 13.87 5.89 0.00 3.18
3915 4295 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
3916 4296 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
3917 4297 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
3918 4298 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
3919 4299 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3920 4300 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3921 4301 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3922 4302 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3923 4303 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3924 4304 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3925 4305 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3926 4306 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3927 4307 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3928 4308 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3929 4309 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3930 4310 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
3931 4311 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
3932 4312 4.474303 TTATACTCCCTCCGTCCCATAA 57.526 45.455 0.00 0.00 0.00 1.90
3933 4313 4.202749 ACATTATACTCCCTCCGTCCCATA 60.203 45.833 0.00 0.00 0.00 2.74
3934 4314 3.173965 CATTATACTCCCTCCGTCCCAT 58.826 50.000 0.00 0.00 0.00 4.00
3935 4315 2.090943 ACATTATACTCCCTCCGTCCCA 60.091 50.000 0.00 0.00 0.00 4.37
3936 4316 2.606378 ACATTATACTCCCTCCGTCCC 58.394 52.381 0.00 0.00 0.00 4.46
3937 4317 5.479375 TCATAACATTATACTCCCTCCGTCC 59.521 44.000 0.00 0.00 0.00 4.79
3938 4318 6.585695 TCATAACATTATACTCCCTCCGTC 57.414 41.667 0.00 0.00 0.00 4.79
3939 4319 7.234782 TGAATCATAACATTATACTCCCTCCGT 59.765 37.037 0.00 0.00 0.00 4.69
3940 4320 7.545965 GTGAATCATAACATTATACTCCCTCCG 59.454 40.741 0.00 0.00 0.00 4.63
3941 4321 7.545965 CGTGAATCATAACATTATACTCCCTCC 59.454 40.741 0.00 0.00 0.00 4.30
3942 4322 8.088981 ACGTGAATCATAACATTATACTCCCTC 58.911 37.037 0.00 0.00 0.00 4.30
3943 4323 7.963532 ACGTGAATCATAACATTATACTCCCT 58.036 34.615 0.00 0.00 0.00 4.20
3944 4324 7.870954 TGACGTGAATCATAACATTATACTCCC 59.129 37.037 0.00 0.00 0.00 4.30
3945 4325 8.700644 GTGACGTGAATCATAACATTATACTCC 58.299 37.037 0.00 0.00 0.00 3.85
3946 4326 8.700644 GGTGACGTGAATCATAACATTATACTC 58.299 37.037 0.00 0.00 0.00 2.59
3947 4327 8.201464 TGGTGACGTGAATCATAACATTATACT 58.799 33.333 0.00 0.00 0.00 2.12
3948 4328 8.360325 TGGTGACGTGAATCATAACATTATAC 57.640 34.615 0.00 0.00 0.00 1.47
3974 4526 4.648651 AGATGGGCAACTTTAAGTACGTT 58.351 39.130 0.00 0.00 0.00 3.99
4116 4678 3.119602 AGCATGCTGTGAATGATGTTGAC 60.120 43.478 21.98 0.00 0.00 3.18
4117 4679 3.086282 AGCATGCTGTGAATGATGTTGA 58.914 40.909 21.98 0.00 0.00 3.18
4148 4712 9.586435 CCAATAATTTAGGAAGGAAAACATCAC 57.414 33.333 0.00 0.00 0.00 3.06
4198 4763 3.902261 AACACGGGTATTTTCGGAAAC 57.098 42.857 1.96 0.00 0.00 2.78
4240 4812 2.754552 GCACCAGCAATCAGGTATGAAA 59.245 45.455 0.00 0.00 38.86 2.69
4243 4815 2.048444 AGCACCAGCAATCAGGTATG 57.952 50.000 0.00 0.00 45.49 2.39
4266 4838 7.398829 TCTGCACAAAATACCTCTTATAACCA 58.601 34.615 0.00 0.00 0.00 3.67
4287 4859 7.588512 ACAGAAGAGTGTTTAAATCAATCTGC 58.411 34.615 16.08 14.88 39.58 4.26
4337 5025 4.017380 AGTAATGCTCGACTACGACTTG 57.983 45.455 0.00 0.00 43.81 3.16
4524 5212 8.052141 ACAGGGGAAACTACTAGTAGTACTTAG 58.948 40.741 30.89 20.18 44.96 2.18
4566 5254 5.569413 CCATTTGATAAACAGACTAACGGC 58.431 41.667 0.00 0.00 0.00 5.68
4599 5295 3.845781 TCTAACAGGGGATGAAGATGC 57.154 47.619 0.00 0.00 0.00 3.91
4670 5366 7.159322 ACAAATATACAGAGTTCAGACGTCT 57.841 36.000 13.58 13.58 0.00 4.18
4770 5466 5.771469 TGGACACATGAATGAACAATGAAC 58.229 37.500 0.00 0.00 0.00 3.18
4798 5494 2.442212 TCGTCGAACAACATGCCTTA 57.558 45.000 0.00 0.00 0.00 2.69
4808 5504 3.629438 TGTGTGTAGATTCGTCGAACA 57.371 42.857 10.39 1.17 0.00 3.18
4814 5510 5.862323 GTGACTTGTATGTGTGTAGATTCGT 59.138 40.000 0.00 0.00 0.00 3.85
4895 5591 6.921857 ACCTCCGTATCAAAATATAAGACGTG 59.078 38.462 0.00 0.00 0.00 4.49
4920 5617 7.934457 AGTTCTGACAACGTTCTTTAGTACTA 58.066 34.615 0.00 0.00 0.00 1.82
4936 5633 6.459573 GCTTGGTTTTGTATTGAGTTCTGACA 60.460 38.462 0.00 0.00 0.00 3.58
4939 5636 6.076981 AGCTTGGTTTTGTATTGAGTTCTG 57.923 37.500 0.00 0.00 0.00 3.02
4941 5638 8.296713 TGAATAGCTTGGTTTTGTATTGAGTTC 58.703 33.333 0.00 0.00 0.00 3.01
5009 5706 3.976793 TGCAAGCAACTTTCTCAAGAG 57.023 42.857 0.00 0.00 33.72 2.85
5010 5707 4.338964 TGAATGCAAGCAACTTTCTCAAGA 59.661 37.500 0.00 0.00 33.72 3.02
5011 5708 4.613944 TGAATGCAAGCAACTTTCTCAAG 58.386 39.130 0.00 0.00 35.92 3.02
5015 5712 5.464389 GTGATTTGAATGCAAGCAACTTTCT 59.536 36.000 0.00 0.00 35.04 2.52
5039 5736 6.306356 CAGGTCAAGAACTTTGCATTATTTCG 59.694 38.462 0.00 0.00 0.00 3.46
5050 5747 3.560068 CGCTTGTACAGGTCAAGAACTTT 59.440 43.478 6.86 0.00 43.17 2.66
5056 5753 0.512952 GTGCGCTTGTACAGGTCAAG 59.487 55.000 9.73 0.00 43.31 3.02
5063 5760 0.393448 TGTTAGGGTGCGCTTGTACA 59.607 50.000 9.73 2.69 0.00 2.90
5072 5769 1.440938 TTGTGCGTGTGTTAGGGTGC 61.441 55.000 0.00 0.00 0.00 5.01
5085 5782 2.791383 TTTTCCTGGTTCATTGTGCG 57.209 45.000 0.00 0.00 0.00 5.34
5096 5793 2.507471 AGGGTGCTCTCTATTTTCCTGG 59.493 50.000 0.00 0.00 0.00 4.45
5111 5808 7.959109 CGTATTTTACTAGTTGTTTTAGGGTGC 59.041 37.037 0.00 0.00 0.00 5.01
5126 5825 6.238953 GCTCCAGAGGTCATCGTATTTTACTA 60.239 42.308 0.00 0.00 0.00 1.82
5134 5833 2.145397 AAGCTCCAGAGGTCATCGTA 57.855 50.000 0.00 0.00 38.35 3.43
5139 5838 1.070758 GACACAAAGCTCCAGAGGTCA 59.929 52.381 0.00 0.00 38.35 4.02
5140 5839 1.070758 TGACACAAAGCTCCAGAGGTC 59.929 52.381 0.00 0.00 38.35 3.85
5142 5841 2.289882 TGATGACACAAAGCTCCAGAGG 60.290 50.000 0.00 0.00 0.00 3.69
5145 5844 3.128242 GGAATGATGACACAAAGCTCCAG 59.872 47.826 0.00 0.00 0.00 3.86
5146 5845 3.084039 GGAATGATGACACAAAGCTCCA 58.916 45.455 0.00 0.00 0.00 3.86
5148 5847 4.005650 TCAGGAATGATGACACAAAGCTC 58.994 43.478 0.00 0.00 0.00 4.09
5153 5852 4.371624 AGGTTCAGGAATGATGACACAA 57.628 40.909 0.00 0.00 0.00 3.33
5154 5853 4.074259 CAAGGTTCAGGAATGATGACACA 58.926 43.478 0.00 0.00 0.00 3.72
5167 5866 3.799281 TGGTCTTTTTGCAAGGTTCAG 57.201 42.857 0.00 0.00 0.00 3.02
5180 5879 6.006449 AGAGTCTTGTATTGCATTGGTCTTT 58.994 36.000 0.00 0.00 0.00 2.52
5187 5886 5.416639 TGATTGCAGAGTCTTGTATTGCATT 59.583 36.000 3.62 1.07 43.46 3.56
5188 5887 4.945543 TGATTGCAGAGTCTTGTATTGCAT 59.054 37.500 3.62 0.00 43.46 3.96
5233 5932 3.440872 GGTGGCAATTATGTCGTGGTTAA 59.559 43.478 0.00 0.00 32.34 2.01
5234 5933 3.011119 GGTGGCAATTATGTCGTGGTTA 58.989 45.455 0.00 0.00 32.34 2.85
5242 5941 1.404047 GCAAAGCGGTGGCAATTATGT 60.404 47.619 6.64 0.00 43.41 2.29
5249 5948 2.669569 GAGAGCAAAGCGGTGGCA 60.670 61.111 13.10 0.00 43.41 4.92
5251 5950 0.890996 AAAGGAGAGCAAAGCGGTGG 60.891 55.000 0.00 0.00 0.00 4.61
5253 5952 1.202818 AGAAAAGGAGAGCAAAGCGGT 60.203 47.619 0.00 0.00 0.00 5.68
5256 5955 3.055591 GCAAAGAAAAGGAGAGCAAAGC 58.944 45.455 0.00 0.00 0.00 3.51
5265 5964 1.791103 CGCCGGTGCAAAGAAAAGGA 61.791 55.000 0.00 0.00 37.32 3.36
5266 5965 1.371635 CGCCGGTGCAAAGAAAAGG 60.372 57.895 0.00 0.00 37.32 3.11
5280 5979 2.740714 CCTTCTCTTTTCGGCGCCG 61.741 63.158 42.13 42.13 41.35 6.46
5307 6006 0.821517 CAGGCATGTTGGATGCACAT 59.178 50.000 8.78 0.00 46.21 3.21
5315 6014 1.141019 GCTGATGCAGGCATGTTGG 59.859 57.895 12.12 0.44 36.70 3.77
5349 6048 3.772619 GGCCGTTTGGACAGCTATA 57.227 52.632 0.00 0.00 45.78 1.31
5350 6049 4.637771 GGCCGTTTGGACAGCTAT 57.362 55.556 0.00 0.00 45.78 2.97
5371 6070 2.233605 TTAGGATGGGCCGTGTCGTG 62.234 60.000 1.02 0.00 43.43 4.35
5372 6071 1.335132 ATTAGGATGGGCCGTGTCGT 61.335 55.000 1.02 3.29 43.43 4.34
5373 6072 0.600255 GATTAGGATGGGCCGTGTCG 60.600 60.000 1.02 0.00 43.43 4.35
5374 6073 0.600255 CGATTAGGATGGGCCGTGTC 60.600 60.000 1.02 0.00 43.43 3.67
5375 6074 1.335132 ACGATTAGGATGGGCCGTGT 61.335 55.000 1.02 0.00 43.43 4.49
5376 6075 0.179056 AACGATTAGGATGGGCCGTG 60.179 55.000 1.02 0.00 43.43 4.94
5377 6076 0.106149 GAACGATTAGGATGGGCCGT 59.894 55.000 0.00 0.00 43.43 5.68
5378 6077 0.602905 GGAACGATTAGGATGGGCCG 60.603 60.000 0.00 0.00 43.43 6.13
5379 6078 0.765510 AGGAACGATTAGGATGGGCC 59.234 55.000 0.00 0.00 0.00 5.80
5380 6079 1.543429 CCAGGAACGATTAGGATGGGC 60.543 57.143 0.00 0.00 0.00 5.36
5381 6080 1.543429 GCCAGGAACGATTAGGATGGG 60.543 57.143 0.00 0.00 0.00 4.00
5382 6081 1.140852 TGCCAGGAACGATTAGGATGG 59.859 52.381 0.00 0.00 0.00 3.51
5383 6082 2.213499 GTGCCAGGAACGATTAGGATG 58.787 52.381 0.00 0.00 0.00 3.51
5384 6083 1.202533 CGTGCCAGGAACGATTAGGAT 60.203 52.381 15.94 0.00 43.68 3.24
5385 6084 0.174845 CGTGCCAGGAACGATTAGGA 59.825 55.000 15.94 0.00 43.68 2.94
5386 6085 0.810031 CCGTGCCAGGAACGATTAGG 60.810 60.000 22.97 0.00 43.68 2.69
5387 6086 1.429148 GCCGTGCCAGGAACGATTAG 61.429 60.000 22.97 5.51 43.68 1.73
5388 6087 1.448893 GCCGTGCCAGGAACGATTA 60.449 57.895 22.97 0.00 43.68 1.75
5389 6088 2.746277 GCCGTGCCAGGAACGATT 60.746 61.111 22.97 0.00 43.68 3.34
5390 6089 3.665675 GAGCCGTGCCAGGAACGAT 62.666 63.158 22.97 9.59 43.68 3.73
5391 6090 4.373116 GAGCCGTGCCAGGAACGA 62.373 66.667 22.97 0.00 43.68 3.85
5411 6110 1.101049 AATAATTGTGCCTCGGCGGG 61.101 55.000 7.21 1.99 45.51 6.13
5412 6111 1.588674 TAATAATTGTGCCTCGGCGG 58.411 50.000 7.21 0.00 45.51 6.13
5413 6112 3.743911 TGTATAATAATTGTGCCTCGGCG 59.256 43.478 0.00 0.00 45.51 6.46
5414 6113 4.154195 CCTGTATAATAATTGTGCCTCGGC 59.846 45.833 0.00 0.00 42.35 5.54
5415 6114 4.154195 GCCTGTATAATAATTGTGCCTCGG 59.846 45.833 0.00 0.00 0.00 4.63
5416 6115 4.154195 GGCCTGTATAATAATTGTGCCTCG 59.846 45.833 0.00 0.00 33.64 4.63
5417 6116 4.154195 CGGCCTGTATAATAATTGTGCCTC 59.846 45.833 0.00 0.00 34.25 4.70
5418 6117 4.072131 CGGCCTGTATAATAATTGTGCCT 58.928 43.478 0.00 0.00 34.25 4.75
5419 6118 3.818773 ACGGCCTGTATAATAATTGTGCC 59.181 43.478 0.00 0.00 0.00 5.01
5420 6119 4.783242 CACGGCCTGTATAATAATTGTGC 58.217 43.478 0.00 0.00 0.00 4.57
5421 6120 4.320202 GGCACGGCCTGTATAATAATTGTG 60.320 45.833 0.00 0.00 46.69 3.33
5422 6121 3.818773 GGCACGGCCTGTATAATAATTGT 59.181 43.478 0.00 0.00 46.69 2.71
5423 6122 4.419522 GGCACGGCCTGTATAATAATTG 57.580 45.455 0.00 0.00 46.69 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.