Multiple sequence alignment - TraesCS1A01G255800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G255800 chr1A 100.000 5401 0 0 1 5401 448038486 448033086 0.000000e+00 9974.0
1 TraesCS1A01G255800 chr1A 82.841 542 81 11 3499 4034 554306034 554306569 5.210000e-130 475.0
2 TraesCS1A01G255800 chr1A 100.000 123 0 0 5629 5751 448032858 448032736 1.610000e-55 228.0
3 TraesCS1A01G255800 chr1A 83.708 178 27 2 3096 3272 554305768 554305944 3.560000e-37 167.0
4 TraesCS1A01G255800 chr1D 94.406 3039 125 23 359 3385 347413039 347410034 0.000000e+00 4628.0
5 TraesCS1A01G255800 chr1D 95.708 1491 52 8 3469 4957 347410006 347408526 0.000000e+00 2388.0
6 TraesCS1A01G255800 chr1D 82.321 560 92 7 3499 4054 462477013 462477569 4.030000e-131 479.0
7 TraesCS1A01G255800 chr1D 88.215 297 29 6 1 295 347413335 347413043 3.300000e-92 350.0
8 TraesCS1A01G255800 chr1D 83.838 297 48 0 3798 4094 7128142 7128438 3.390000e-72 283.0
9 TraesCS1A01G255800 chr1D 86.517 178 22 2 3096 3272 462476747 462476923 1.640000e-45 195.0
10 TraesCS1A01G255800 chr1D 80.000 115 17 4 5635 5748 386752796 386752687 4.780000e-11 80.5
11 TraesCS1A01G255800 chr1B 93.430 3044 140 34 358 3381 468514222 468511219 0.000000e+00 4458.0
12 TraesCS1A01G255800 chr1B 92.923 1526 64 23 3469 4957 468511183 468509665 0.000000e+00 2180.0
13 TraesCS1A01G255800 chr1B 82.491 554 88 9 3499 4047 637594119 637594668 1.450000e-130 477.0
14 TraesCS1A01G255800 chr1B 80.531 226 40 4 3096 3319 637593853 637594076 2.760000e-38 171.0
15 TraesCS1A01G255800 chr1B 86.316 95 13 0 5635 5729 615765467 615765561 2.830000e-18 104.0
16 TraesCS1A01G255800 chr2D 80.466 558 106 3 3499 4054 639628687 639629243 1.920000e-114 424.0
17 TraesCS1A01G255800 chr2D 81.778 225 39 2 3099 3322 639628424 639628647 2.740000e-43 187.0
18 TraesCS1A01G255800 chr2A 80.214 561 102 8 3499 4054 765017638 765018194 4.150000e-111 412.0
19 TraesCS1A01G255800 chr2A 81.081 222 40 2 3099 3319 765017375 765017595 5.920000e-40 176.0
20 TraesCS1A01G255800 chr2B 80.000 560 105 6 3499 4054 798630693 798630137 1.930000e-109 407.0
21 TraesCS1A01G255800 chr2B 81.532 222 39 2 3102 3322 798630953 798630733 1.270000e-41 182.0
22 TraesCS1A01G255800 chr4B 79.037 353 69 4 5037 5387 527012783 527012434 2.680000e-58 237.0
23 TraesCS1A01G255800 chr4B 83.516 91 15 0 5635 5725 671780758 671780668 1.030000e-12 86.1
24 TraesCS1A01G255800 chr7A 99.091 110 1 0 619 728 735479812 735479703 1.260000e-46 198.0
25 TraesCS1A01G255800 chr7A 97.143 35 1 0 744 778 735479708 735479674 6.220000e-05 60.2
26 TraesCS1A01G255800 chr4A 88.496 113 12 1 5635 5746 1687018 1687130 1.010000e-27 135.0
27 TraesCS1A01G255800 chr7D 83.051 118 19 1 5635 5751 69281678 69281561 7.880000e-19 106.0
28 TraesCS1A01G255800 chr7D 82.203 118 20 1 5635 5751 94746153 94746036 3.670000e-17 100.0
29 TraesCS1A01G255800 chr5D 86.047 86 11 1 5635 5720 361408157 361408241 2.210000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G255800 chr1A 448032736 448038486 5750 True 5101.000000 9974 100.000000 1 5751 2 chr1A.!!$R1 5750
1 TraesCS1A01G255800 chr1A 554305768 554306569 801 False 321.000000 475 83.274500 3096 4034 2 chr1A.!!$F1 938
2 TraesCS1A01G255800 chr1D 347408526 347413335 4809 True 2455.333333 4628 92.776333 1 4957 3 chr1D.!!$R2 4956
3 TraesCS1A01G255800 chr1D 462476747 462477569 822 False 337.000000 479 84.419000 3096 4054 2 chr1D.!!$F2 958
4 TraesCS1A01G255800 chr1B 468509665 468514222 4557 True 3319.000000 4458 93.176500 358 4957 2 chr1B.!!$R1 4599
5 TraesCS1A01G255800 chr1B 637593853 637594668 815 False 324.000000 477 81.511000 3096 4047 2 chr1B.!!$F2 951
6 TraesCS1A01G255800 chr2D 639628424 639629243 819 False 305.500000 424 81.122000 3099 4054 2 chr2D.!!$F1 955
7 TraesCS1A01G255800 chr2A 765017375 765018194 819 False 294.000000 412 80.647500 3099 4054 2 chr2A.!!$F1 955
8 TraesCS1A01G255800 chr2B 798630137 798630953 816 True 294.500000 407 80.766000 3102 4054 2 chr2B.!!$R1 952

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 339 0.033601 TGTAGGGCGGCCATGAATTT 60.034 50.0 31.59 10.07 0.0 1.82 F
346 347 0.108041 GGCCATGAATTTGCCAGTGG 60.108 55.0 4.20 4.20 44.7 4.00 F
630 640 0.238553 GAAAAAGCGAGCACCCAGAC 59.761 55.0 0.00 0.00 0.0 3.51 F
1993 2007 0.457337 AACGGACGTGGTAATCGAGC 60.457 55.0 0.00 0.00 0.0 5.03 F
2843 2876 0.167470 CGCAAGCACAATCTGACAGG 59.833 55.0 1.81 0.00 0.0 4.00 F
3400 3437 0.099436 GAATCATCAAGCACCACCGC 59.901 55.0 0.00 0.00 0.0 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1381 1394 0.677842 GGTAGTTGACGGTGTCCAGT 59.322 55.000 0.00 0.0 0.0 4.00 R
1970 1984 1.353076 GATTACCACGTCCGTTCACC 58.647 55.000 0.00 0.0 0.0 4.02 R
2001 2015 1.450312 GCCATCCCTGAGAACCACG 60.450 63.158 0.00 0.0 0.0 4.94 R
3068 3101 0.110419 TGAGCATACAAAACACGCGC 60.110 50.000 5.73 0.0 0.0 6.86 R
4546 4613 0.179127 ATCATCAGTCACTCACGCCG 60.179 55.000 0.00 0.0 0.0 6.46 R
5296 5366 0.038744 ATTTGCAGGAGGTGGAGGTG 59.961 55.000 0.00 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.229506 CCATAGAATTCAGTACAAAGGAATCCC 59.770 40.741 8.44 0.00 31.26 3.85
45 46 7.883311 TCAGTACAAAGGAATCCCTAGAAAAAG 59.117 37.037 0.00 0.00 43.48 2.27
47 48 7.883833 AGTACAAAGGAATCCCTAGAAAAAGTC 59.116 37.037 0.00 0.00 43.48 3.01
55 56 5.086104 TCCCTAGAAAAAGTCTTCCGATG 57.914 43.478 0.00 0.00 37.84 3.84
60 61 6.595716 CCTAGAAAAAGTCTTCCGATGTGATT 59.404 38.462 0.00 0.00 37.84 2.57
67 68 6.227298 AGTCTTCCGATGTGATTCAATACT 57.773 37.500 0.00 0.00 0.00 2.12
90 91 8.942338 ACTATGAATTAAACAATCAGCGTAGA 57.058 30.769 0.00 0.00 0.00 2.59
129 130 7.607615 ATTCCCATCCTCCAATTTCTTTATG 57.392 36.000 0.00 0.00 0.00 1.90
150 151 6.956299 ATGAAAATCCTTTGAATCAAAGCG 57.044 33.333 25.70 19.33 46.44 4.68
186 187 0.384669 AAACTAGGCTAGCGCTACCG 59.615 55.000 21.26 6.14 36.09 4.02
191 192 2.962253 GCTAGCGCTACCGGCAAG 60.962 66.667 14.45 4.70 41.91 4.01
227 228 7.584987 ACACAACAAAACTAGCAGTATCATTC 58.415 34.615 0.00 0.00 0.00 2.67
229 230 6.714810 ACAACAAAACTAGCAGTATCATTCCA 59.285 34.615 0.00 0.00 0.00 3.53
231 232 6.476378 ACAAAACTAGCAGTATCATTCCAGT 58.524 36.000 0.00 0.00 0.00 4.00
248 249 2.359900 CAGTAGGGCGAGCTGAATTTT 58.640 47.619 0.00 0.00 32.39 1.82
249 250 2.096496 CAGTAGGGCGAGCTGAATTTTG 59.904 50.000 0.00 0.00 32.39 2.44
251 252 1.153765 GGGCGAGCTGAATTTTGCC 60.154 57.895 0.00 0.00 42.18 4.52
252 253 1.586028 GGCGAGCTGAATTTTGCCA 59.414 52.632 0.00 0.00 42.41 4.92
253 254 0.457337 GGCGAGCTGAATTTTGCCAG 60.457 55.000 0.00 0.00 42.41 4.85
254 255 0.242017 GCGAGCTGAATTTTGCCAGT 59.758 50.000 0.00 0.00 33.19 4.00
255 256 1.973138 CGAGCTGAATTTTGCCAGTG 58.027 50.000 0.00 0.00 33.19 3.66
256 257 1.536766 CGAGCTGAATTTTGCCAGTGA 59.463 47.619 0.00 0.00 33.19 3.41
257 258 2.666619 CGAGCTGAATTTTGCCAGTGAC 60.667 50.000 0.00 0.00 33.19 3.67
258 259 2.294233 GAGCTGAATTTTGCCAGTGACA 59.706 45.455 0.00 0.00 33.19 3.58
259 260 2.035066 AGCTGAATTTTGCCAGTGACAC 59.965 45.455 0.00 0.00 33.19 3.67
261 262 3.854784 GCTGAATTTTGCCAGTGACACTC 60.855 47.826 4.74 0.00 33.19 3.51
262 263 3.554934 TGAATTTTGCCAGTGACACTCT 58.445 40.909 4.74 0.00 0.00 3.24
263 264 3.565482 TGAATTTTGCCAGTGACACTCTC 59.435 43.478 4.74 0.84 0.00 3.20
264 265 3.498774 ATTTTGCCAGTGACACTCTCT 57.501 42.857 4.74 0.00 0.00 3.10
265 266 4.623932 ATTTTGCCAGTGACACTCTCTA 57.376 40.909 4.74 0.00 0.00 2.43
269 270 2.698274 TGCCAGTGACACTCTCTAAACA 59.302 45.455 4.74 0.00 0.00 2.83
295 296 2.281761 CCACGAGCAACCAAGGCT 60.282 61.111 0.00 0.00 46.07 4.58
301 302 3.994165 AGCAACCAAGGCTCATCAT 57.006 47.368 0.00 0.00 36.81 2.45
302 303 2.226962 AGCAACCAAGGCTCATCATT 57.773 45.000 0.00 0.00 36.81 2.57
303 304 3.370840 AGCAACCAAGGCTCATCATTA 57.629 42.857 0.00 0.00 36.81 1.90
304 305 3.285484 AGCAACCAAGGCTCATCATTAG 58.715 45.455 0.00 0.00 36.81 1.73
305 306 3.019564 GCAACCAAGGCTCATCATTAGT 58.980 45.455 0.00 0.00 0.00 2.24
306 307 3.181493 GCAACCAAGGCTCATCATTAGTG 60.181 47.826 0.00 0.00 0.00 2.74
307 308 3.287867 ACCAAGGCTCATCATTAGTGG 57.712 47.619 0.00 0.00 0.00 4.00
308 309 2.092212 ACCAAGGCTCATCATTAGTGGG 60.092 50.000 1.58 0.00 0.00 4.61
309 310 1.952296 CAAGGCTCATCATTAGTGGGC 59.048 52.381 0.00 0.00 42.36 5.36
310 311 1.516110 AGGCTCATCATTAGTGGGCT 58.484 50.000 0.00 0.00 42.69 5.19
311 312 1.849039 AGGCTCATCATTAGTGGGCTT 59.151 47.619 0.00 0.00 42.69 4.35
312 313 2.243221 AGGCTCATCATTAGTGGGCTTT 59.757 45.455 0.00 0.00 42.69 3.51
313 314 2.620585 GGCTCATCATTAGTGGGCTTTC 59.379 50.000 0.00 0.00 42.69 2.62
314 315 3.282021 GCTCATCATTAGTGGGCTTTCA 58.718 45.455 0.00 0.00 39.95 2.69
315 316 3.065925 GCTCATCATTAGTGGGCTTTCAC 59.934 47.826 0.00 0.00 39.95 3.18
316 317 4.264253 CTCATCATTAGTGGGCTTTCACA 58.736 43.478 7.79 0.00 39.93 3.58
317 318 4.661222 TCATCATTAGTGGGCTTTCACAA 58.339 39.130 7.79 2.37 39.93 3.33
318 319 4.458989 TCATCATTAGTGGGCTTTCACAAC 59.541 41.667 7.79 0.00 39.93 3.32
319 320 4.098914 TCATTAGTGGGCTTTCACAACT 57.901 40.909 7.79 0.00 39.93 3.16
320 321 3.820467 TCATTAGTGGGCTTTCACAACTG 59.180 43.478 7.79 3.13 39.93 3.16
321 322 3.290948 TTAGTGGGCTTTCACAACTGT 57.709 42.857 7.79 0.00 39.93 3.55
322 323 4.425180 TTAGTGGGCTTTCACAACTGTA 57.575 40.909 7.79 0.00 39.93 2.74
323 324 2.851195 AGTGGGCTTTCACAACTGTAG 58.149 47.619 7.79 0.00 39.93 2.74
324 325 1.880027 GTGGGCTTTCACAACTGTAGG 59.120 52.381 0.00 0.00 37.57 3.18
325 326 1.202879 TGGGCTTTCACAACTGTAGGG 60.203 52.381 0.00 0.00 0.00 3.53
326 327 0.881796 GGCTTTCACAACTGTAGGGC 59.118 55.000 0.00 0.00 0.00 5.19
327 328 0.517316 GCTTTCACAACTGTAGGGCG 59.483 55.000 0.00 0.00 0.00 6.13
328 329 1.156736 CTTTCACAACTGTAGGGCGG 58.843 55.000 0.00 0.00 0.00 6.13
329 330 0.887387 TTTCACAACTGTAGGGCGGC 60.887 55.000 0.00 0.00 0.00 6.53
330 331 2.741486 TTCACAACTGTAGGGCGGCC 62.741 60.000 22.67 22.67 0.00 6.13
331 332 3.246112 ACAACTGTAGGGCGGCCA 61.246 61.111 31.59 13.56 0.00 5.36
332 333 2.272146 CAACTGTAGGGCGGCCAT 59.728 61.111 31.59 17.59 0.00 4.40
333 334 2.114670 CAACTGTAGGGCGGCCATG 61.115 63.158 31.59 18.07 0.00 3.66
334 335 2.297895 AACTGTAGGGCGGCCATGA 61.298 57.895 31.59 12.26 0.00 3.07
335 336 1.847798 AACTGTAGGGCGGCCATGAA 61.848 55.000 31.59 11.55 0.00 2.57
336 337 1.149174 CTGTAGGGCGGCCATGAAT 59.851 57.895 31.59 11.72 0.00 2.57
337 338 0.466189 CTGTAGGGCGGCCATGAATT 60.466 55.000 31.59 10.89 0.00 2.17
338 339 0.033601 TGTAGGGCGGCCATGAATTT 60.034 50.000 31.59 10.07 0.00 1.82
339 340 0.385390 GTAGGGCGGCCATGAATTTG 59.615 55.000 31.59 0.00 0.00 2.32
340 341 1.391157 TAGGGCGGCCATGAATTTGC 61.391 55.000 31.59 0.00 0.00 3.68
341 342 2.202919 GGCGGCCATGAATTTGCC 60.203 61.111 15.62 0.00 41.85 4.52
342 343 2.578128 GCGGCCATGAATTTGCCA 59.422 55.556 2.24 0.00 45.63 4.92
343 344 1.519898 GCGGCCATGAATTTGCCAG 60.520 57.895 2.24 4.66 45.63 4.85
344 345 1.892338 CGGCCATGAATTTGCCAGT 59.108 52.632 2.24 0.00 45.63 4.00
345 346 0.458889 CGGCCATGAATTTGCCAGTG 60.459 55.000 2.24 0.00 45.63 3.66
346 347 0.108041 GGCCATGAATTTGCCAGTGG 60.108 55.000 4.20 4.20 44.70 4.00
425 426 0.819582 AAAGCCCATCATTTCCTGCG 59.180 50.000 0.00 0.00 0.00 5.18
459 460 9.587772 TTCTCTATTTTCTTCTCCGTAATTGAG 57.412 33.333 0.00 0.00 32.84 3.02
460 461 8.967918 TCTCTATTTTCTTCTCCGTAATTGAGA 58.032 33.333 0.00 0.00 35.93 3.27
506 508 7.450124 TCCCATTATCTTCTCGTGATACTAC 57.550 40.000 0.00 0.00 0.00 2.73
583 585 2.412591 CCTCCCTCTCTCTCTCTCTCT 58.587 57.143 0.00 0.00 0.00 3.10
585 587 3.312890 CTCCCTCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
587 589 3.051803 TCCCTCTCTCTCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
588 590 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
591 593 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
630 640 0.238553 GAAAAAGCGAGCACCCAGAC 59.761 55.000 0.00 0.00 0.00 3.51
631 641 1.172812 AAAAAGCGAGCACCCAGACC 61.173 55.000 0.00 0.00 0.00 3.85
632 642 3.553095 AAAGCGAGCACCCAGACCC 62.553 63.158 0.00 0.00 0.00 4.46
634 644 4.767255 GCGAGCACCCAGACCCAG 62.767 72.222 0.00 0.00 0.00 4.45
635 645 2.997315 CGAGCACCCAGACCCAGA 60.997 66.667 0.00 0.00 0.00 3.86
645 655 4.154347 GACCCAGAGGCTCAGGCG 62.154 72.222 19.77 14.91 39.81 5.52
677 687 2.435938 AATACCAGCCACACGCCG 60.436 61.111 0.00 0.00 38.78 6.46
679 689 2.252072 AATACCAGCCACACGCCGAT 62.252 55.000 0.00 0.00 38.78 4.18
709 719 3.083997 GGCCTCGGTGGTCATCCT 61.084 66.667 0.00 0.00 40.97 3.24
710 720 2.670148 GGCCTCGGTGGTCATCCTT 61.670 63.158 0.00 0.00 40.97 3.36
752 762 2.072487 ACCTCACCCCCATCCATCG 61.072 63.158 0.00 0.00 0.00 3.84
818 828 4.008933 GCACGGAGCACCTCACCT 62.009 66.667 0.00 0.00 44.79 4.00
820 830 3.374402 ACGGAGCACCTCACCTCG 61.374 66.667 0.00 0.00 31.08 4.63
821 831 3.374402 CGGAGCACCTCACCTCGT 61.374 66.667 0.00 0.00 31.08 4.18
822 832 2.574399 GGAGCACCTCACCTCGTC 59.426 66.667 0.00 0.00 31.08 4.20
823 833 2.276116 GGAGCACCTCACCTCGTCA 61.276 63.158 0.00 0.00 31.08 4.35
824 834 1.080434 GAGCACCTCACCTCGTCAC 60.080 63.158 0.00 0.00 0.00 3.67
825 835 1.528292 GAGCACCTCACCTCGTCACT 61.528 60.000 0.00 0.00 0.00 3.41
826 836 1.080434 GCACCTCACCTCGTCACTC 60.080 63.158 0.00 0.00 0.00 3.51
827 837 1.528292 GCACCTCACCTCGTCACTCT 61.528 60.000 0.00 0.00 0.00 3.24
842 852 2.683933 TCTCCGCTCCACTTCCCC 60.684 66.667 0.00 0.00 0.00 4.81
847 857 3.787001 GCTCCACTTCCCCTCCCG 61.787 72.222 0.00 0.00 0.00 5.14
942 952 3.056891 TCATTTTTGGATTCACCCGCTTC 60.057 43.478 0.00 0.00 38.00 3.86
981 991 2.328099 GGGAGTTGAGCCGTTGCAG 61.328 63.158 0.00 0.00 41.13 4.41
995 1005 2.421619 GTTGCAGTCTTGAGAAGGAGG 58.578 52.381 0.00 0.00 0.00 4.30
1110 1123 1.296715 CAGGCCGCTCAAGGTTAGT 59.703 57.895 0.00 0.00 0.00 2.24
1113 1126 0.810426 GGCCGCTCAAGGTTAGTAGC 60.810 60.000 0.00 0.00 0.00 3.58
1175 1188 6.201806 CGATTCTTCTCTGTTCTTGTTCTTGT 59.798 38.462 0.00 0.00 0.00 3.16
1200 1213 3.290776 GAGTAATTCGATGGCCGCT 57.709 52.632 0.00 0.00 38.37 5.52
1201 1214 2.433868 GAGTAATTCGATGGCCGCTA 57.566 50.000 0.00 0.00 38.37 4.26
1202 1215 2.329379 GAGTAATTCGATGGCCGCTAG 58.671 52.381 0.00 0.00 38.37 3.42
1203 1216 1.000955 AGTAATTCGATGGCCGCTAGG 59.999 52.381 0.00 0.00 41.62 3.02
1242 1255 1.333619 TGCTCGTCTTCTTTGCAAACC 59.666 47.619 8.05 0.00 0.00 3.27
1247 1260 3.001533 TCGTCTTCTTTGCAAACCGTAAC 59.998 43.478 8.05 2.70 0.00 2.50
1277 1290 3.454573 CGCCATGGCCAATGCTGT 61.455 61.111 30.79 0.00 37.98 4.40
1295 1308 0.861837 GTATCGATTTGGCGAGCAGG 59.138 55.000 1.71 0.00 44.26 4.85
1605 1618 1.680555 CGGCCACCAGGTAATTAAGCA 60.681 52.381 2.24 0.00 37.19 3.91
1638 1651 0.897863 TAACAATGCACACCTGGCCC 60.898 55.000 0.00 0.00 0.00 5.80
1639 1652 3.751246 CAATGCACACCTGGCCCG 61.751 66.667 0.00 0.00 0.00 6.13
1953 1967 8.566260 GCATCTGATTATGAAGCACTTAATCTT 58.434 33.333 19.55 9.85 41.78 2.40
1970 1984 4.590400 ATCTTCTCGTGAAAAATCTGCG 57.410 40.909 1.12 0.00 0.00 5.18
1990 2004 0.986992 GTGAACGGACGTGGTAATCG 59.013 55.000 0.00 0.00 0.00 3.34
1993 2007 0.457337 AACGGACGTGGTAATCGAGC 60.457 55.000 0.00 0.00 0.00 5.03
2068 2082 2.358247 AACGTGGTGGCGGTGATC 60.358 61.111 0.00 0.00 35.98 2.92
2316 2330 3.189287 CACAAAATGCACCTCCTACACTC 59.811 47.826 0.00 0.00 0.00 3.51
2317 2331 2.749621 CAAAATGCACCTCCTACACTCC 59.250 50.000 0.00 0.00 0.00 3.85
2393 2407 4.202233 TGAATCAAATTCCAACTTGCTGCA 60.202 37.500 0.00 0.00 38.50 4.41
2406 2421 4.588899 ACTTGCTGCATGATAGGTTTGTA 58.411 39.130 20.66 0.00 0.00 2.41
2502 2532 3.777465 ATGACAGCAAATCAGCATCAC 57.223 42.857 0.00 0.00 35.57 3.06
2512 2542 1.971481 TCAGCATCACAGCAACAGTT 58.029 45.000 0.00 0.00 36.85 3.16
2513 2543 2.300433 TCAGCATCACAGCAACAGTTT 58.700 42.857 0.00 0.00 36.85 2.66
2580 2610 6.373495 ACGCCTCCGAGTTTTAAATCTTAAAT 59.627 34.615 0.45 0.00 38.29 1.40
2666 2697 1.002257 TGCCAGGTGTAGTGCATGG 60.002 57.895 0.00 0.00 31.91 3.66
2699 2730 0.327924 TCCACCAGAAATGGCGATGT 59.672 50.000 0.00 0.00 37.13 3.06
2761 2792 4.882671 TGTCTTCAACAAAAGAGCTCAC 57.117 40.909 17.77 0.77 35.99 3.51
2764 2795 6.112734 TGTCTTCAACAAAAGAGCTCACTTA 58.887 36.000 17.77 0.00 35.99 2.24
2780 2811 4.955335 TCACTTAAGGGAAGGGAGTATCA 58.045 43.478 4.52 0.00 42.98 2.15
2843 2876 0.167470 CGCAAGCACAATCTGACAGG 59.833 55.000 1.81 0.00 0.00 4.00
2860 2893 5.030147 TGACAGGAAGGACATAGGTGTATT 58.970 41.667 0.00 0.00 39.09 1.89
2949 2982 7.811236 ACTTGACAGCTCAAATTGATAATGTTG 59.189 33.333 0.00 0.00 35.92 3.33
2986 3019 6.098266 GGGCTGGTCATATTCCTTTTGTAAAT 59.902 38.462 0.00 0.00 0.00 1.40
2987 3020 7.286775 GGGCTGGTCATATTCCTTTTGTAAATA 59.713 37.037 0.00 0.00 0.00 1.40
2988 3021 8.691797 GGCTGGTCATATTCCTTTTGTAAATAA 58.308 33.333 0.00 0.00 0.00 1.40
3008 3041 1.117994 ACTAGGCGGCCCTAACTAAC 58.882 55.000 17.02 0.00 43.04 2.34
3012 3045 2.202974 CGGCCCTAACTAACCGGC 60.203 66.667 0.00 0.00 41.95 6.13
3016 3049 1.141455 GGCCCTAACTAACCGGCATTA 59.859 52.381 0.00 0.00 43.50 1.90
3030 3063 1.735360 CATTACATTGCTGGGCCGG 59.265 57.895 8.39 8.39 0.00 6.13
3068 3101 4.084328 GCCCAGATATTCGACTGATTTTCG 60.084 45.833 2.52 0.00 36.38 3.46
3081 3114 2.286242 TGATTTTCGCGCGTGTTTTGTA 60.286 40.909 30.98 4.20 0.00 2.41
3370 3403 1.167851 CCGACAAGTACCACGGTAGA 58.832 55.000 0.00 0.00 40.42 2.59
3382 3419 6.774170 AGTACCACGGTAGATAACATACATGA 59.226 38.462 0.00 0.00 0.00 3.07
3385 3422 7.152645 ACCACGGTAGATAACATACATGAATC 58.847 38.462 0.00 0.00 0.00 2.52
3386 3423 7.151976 CCACGGTAGATAACATACATGAATCA 58.848 38.462 0.00 0.00 0.00 2.57
3387 3424 7.819415 CCACGGTAGATAACATACATGAATCAT 59.181 37.037 0.00 0.00 0.00 2.45
3388 3425 8.864024 CACGGTAGATAACATACATGAATCATC 58.136 37.037 0.00 0.00 0.00 2.92
3389 3426 8.585018 ACGGTAGATAACATACATGAATCATCA 58.415 33.333 0.00 0.00 40.57 3.07
3393 3430 8.913487 AGATAACATACATGAATCATCAAGCA 57.087 30.769 0.00 0.00 39.49 3.91
3394 3431 8.781196 AGATAACATACATGAATCATCAAGCAC 58.219 33.333 0.00 0.00 39.49 4.40
3396 3433 5.195185 ACATACATGAATCATCAAGCACCA 58.805 37.500 0.00 0.00 39.49 4.17
3397 3434 5.066893 ACATACATGAATCATCAAGCACCAC 59.933 40.000 0.00 0.00 39.49 4.16
3398 3435 2.756760 ACATGAATCATCAAGCACCACC 59.243 45.455 0.00 0.00 39.49 4.61
3399 3436 1.452110 TGAATCATCAAGCACCACCG 58.548 50.000 0.00 0.00 30.99 4.94
3400 3437 0.099436 GAATCATCAAGCACCACCGC 59.901 55.000 0.00 0.00 0.00 5.68
3401 3438 1.647545 AATCATCAAGCACCACCGCG 61.648 55.000 0.00 0.00 36.85 6.46
3402 3439 2.803155 ATCATCAAGCACCACCGCGT 62.803 55.000 4.92 0.00 36.85 6.01
3403 3440 2.742372 ATCAAGCACCACCGCGTC 60.742 61.111 4.92 0.00 36.85 5.19
3404 3441 3.240134 ATCAAGCACCACCGCGTCT 62.240 57.895 4.92 0.00 36.85 4.18
3405 3442 2.731691 ATCAAGCACCACCGCGTCTT 62.732 55.000 4.92 0.00 36.85 3.01
3406 3443 2.203153 AAGCACCACCGCGTCTTT 60.203 55.556 4.92 0.00 36.85 2.52
3407 3444 2.251642 AAGCACCACCGCGTCTTTC 61.252 57.895 4.92 0.00 36.85 2.62
3408 3445 2.660258 AAGCACCACCGCGTCTTTCT 62.660 55.000 4.92 0.00 36.85 2.52
3409 3446 2.251642 GCACCACCGCGTCTTTCTT 61.252 57.895 4.92 0.00 0.00 2.52
3410 3447 1.569493 CACCACCGCGTCTTTCTTG 59.431 57.895 4.92 0.00 0.00 3.02
3411 3448 2.251642 ACCACCGCGTCTTTCTTGC 61.252 57.895 4.92 0.00 0.00 4.01
3412 3449 2.250939 CCACCGCGTCTTTCTTGCA 61.251 57.895 4.92 0.00 0.00 4.08
3413 3450 1.577328 CCACCGCGTCTTTCTTGCAT 61.577 55.000 4.92 0.00 0.00 3.96
3414 3451 0.238289 CACCGCGTCTTTCTTGCATT 59.762 50.000 4.92 0.00 0.00 3.56
3415 3452 0.951558 ACCGCGTCTTTCTTGCATTT 59.048 45.000 4.92 0.00 0.00 2.32
3416 3453 1.069227 ACCGCGTCTTTCTTGCATTTC 60.069 47.619 4.92 0.00 0.00 2.17
3417 3454 1.069296 CCGCGTCTTTCTTGCATTTCA 60.069 47.619 4.92 0.00 0.00 2.69
3418 3455 2.414559 CCGCGTCTTTCTTGCATTTCAT 60.415 45.455 4.92 0.00 0.00 2.57
3419 3456 2.591148 CGCGTCTTTCTTGCATTTCATG 59.409 45.455 0.00 0.00 0.00 3.07
3420 3457 2.919229 GCGTCTTTCTTGCATTTCATGG 59.081 45.455 0.00 0.00 0.00 3.66
3421 3458 3.366273 GCGTCTTTCTTGCATTTCATGGA 60.366 43.478 0.00 0.00 0.00 3.41
3422 3459 4.676196 GCGTCTTTCTTGCATTTCATGGAT 60.676 41.667 0.00 0.00 0.00 3.41
3423 3460 4.796830 CGTCTTTCTTGCATTTCATGGATG 59.203 41.667 0.00 0.00 0.00 3.51
3424 3461 5.392272 CGTCTTTCTTGCATTTCATGGATGA 60.392 40.000 12.37 0.00 33.99 2.92
3425 3462 6.392354 GTCTTTCTTGCATTTCATGGATGAA 58.608 36.000 12.37 0.00 44.42 2.57
3426 3463 7.039882 GTCTTTCTTGCATTTCATGGATGAAT 58.960 34.615 12.37 0.00 45.30 2.57
3427 3464 7.222224 GTCTTTCTTGCATTTCATGGATGAATC 59.778 37.037 12.37 0.00 45.30 2.52
3428 3465 5.177725 TCTTGCATTTCATGGATGAATCG 57.822 39.130 12.37 0.00 45.30 3.34
3429 3466 4.641541 TCTTGCATTTCATGGATGAATCGT 59.358 37.500 12.37 0.00 45.30 3.73
3430 3467 4.987408 TGCATTTCATGGATGAATCGTT 57.013 36.364 12.37 0.00 45.30 3.85
3431 3468 4.923893 TGCATTTCATGGATGAATCGTTC 58.076 39.130 12.37 0.00 45.30 3.95
3432 3469 4.398673 TGCATTTCATGGATGAATCGTTCA 59.601 37.500 12.37 3.49 45.30 3.18
3447 3484 8.466086 TGAATCGTTCATATGCACTATCATAC 57.534 34.615 3.99 0.00 34.08 2.39
3457 3494 4.752063 TGCACTATCATACATAGGGGAGT 58.248 43.478 0.00 0.00 0.00 3.85
3458 3495 4.528206 TGCACTATCATACATAGGGGAGTG 59.472 45.833 0.00 0.00 36.88 3.51
3466 3503 7.241042 TCATACATAGGGGAGTGTAATTAGC 57.759 40.000 0.00 0.00 34.77 3.09
3467 3504 7.016914 TCATACATAGGGGAGTGTAATTAGCT 58.983 38.462 0.00 0.00 34.77 3.32
3468 3505 5.552870 ACATAGGGGAGTGTAATTAGCTG 57.447 43.478 0.00 0.00 0.00 4.24
3469 3506 4.969359 ACATAGGGGAGTGTAATTAGCTGT 59.031 41.667 0.00 0.00 0.00 4.40
3470 3507 5.428783 ACATAGGGGAGTGTAATTAGCTGTT 59.571 40.000 0.00 0.00 0.00 3.16
3471 3508 6.614087 ACATAGGGGAGTGTAATTAGCTGTTA 59.386 38.462 0.00 0.00 0.00 2.41
3472 3509 7.126726 ACATAGGGGAGTGTAATTAGCTGTTAA 59.873 37.037 0.00 0.00 0.00 2.01
3473 3510 6.576778 AGGGGAGTGTAATTAGCTGTTAAT 57.423 37.500 0.00 0.00 33.33 1.40
3474 3511 6.970191 AGGGGAGTGTAATTAGCTGTTAATT 58.030 36.000 12.96 12.96 42.94 1.40
3475 3512 6.828785 AGGGGAGTGTAATTAGCTGTTAATTG 59.171 38.462 16.64 0.00 41.08 2.32
3476 3513 6.602009 GGGGAGTGTAATTAGCTGTTAATTGT 59.398 38.462 16.64 2.59 41.08 2.71
3551 3588 2.742372 CAGTTCAAGGTCCCGGCG 60.742 66.667 0.00 0.00 0.00 6.46
4149 4186 2.888513 TTAGAGACTGTGTACGCGAC 57.111 50.000 15.93 7.50 0.00 5.19
4151 4188 0.517755 AGAGACTGTGTACGCGACTG 59.482 55.000 15.93 7.50 0.00 3.51
4166 4216 1.592590 CGACTGACGACTGATCTACGC 60.593 57.143 0.00 0.00 45.77 4.42
4172 4222 2.784380 GACGACTGATCTACGCATGTTC 59.216 50.000 0.00 0.00 0.00 3.18
4495 4550 5.771469 TGATCGAAGCAACATTGTCAATTT 58.229 33.333 0.00 0.00 0.00 1.82
4496 4551 6.215121 TGATCGAAGCAACATTGTCAATTTT 58.785 32.000 0.00 0.00 0.00 1.82
4507 4562 7.338800 ACATTGTCAATTTTTCAGACAGACT 57.661 32.000 0.00 0.00 42.54 3.24
4526 4581 1.814793 TGACGGACAGAGACTCAGAG 58.185 55.000 5.02 0.00 0.00 3.35
4527 4582 1.348036 TGACGGACAGAGACTCAGAGA 59.652 52.381 3.79 0.00 0.00 3.10
4552 4619 2.587753 ACCAACACTGACGGCGTG 60.588 61.111 21.19 6.53 38.32 5.34
4633 4701 3.052745 CAAGTACATCGACCATGGATCG 58.947 50.000 21.47 22.35 41.00 3.69
4758 4826 2.663188 GAATGCCTAGAGCCGCCG 60.663 66.667 0.00 0.00 42.71 6.46
4803 4871 4.214758 ACCTTGTACATTTTGGTCGTTAGC 59.785 41.667 0.00 0.00 0.00 3.09
4813 4881 3.953712 TGGTCGTTAGCTGATTCAGAA 57.046 42.857 17.87 0.80 32.44 3.02
4823 4891 7.043059 CGTTAGCTGATTCAGAAAGATTAGTCC 60.043 40.741 17.87 0.00 32.44 3.85
4860 4928 2.561187 TGATCCTCATCAGGGGAAACA 58.439 47.619 0.00 0.00 40.80 2.83
4910 4980 7.174253 ACTGACGTTGATGTACATGGTTAATTT 59.826 33.333 14.43 0.00 0.00 1.82
4914 4984 8.573035 ACGTTGATGTACATGGTTAATTTTTCT 58.427 29.630 14.43 0.00 0.00 2.52
4953 5023 7.956420 ACGTTGTCTTTGTATCTGTGAAATA 57.044 32.000 0.00 0.00 0.00 1.40
4985 5055 5.189659 GAGCATCTACAATCGGACTTAGT 57.810 43.478 0.00 0.00 0.00 2.24
4986 5056 6.315091 GAGCATCTACAATCGGACTTAGTA 57.685 41.667 0.00 0.00 0.00 1.82
4987 5057 6.710597 AGCATCTACAATCGGACTTAGTAA 57.289 37.500 0.00 0.00 0.00 2.24
4988 5058 7.108841 AGCATCTACAATCGGACTTAGTAAA 57.891 36.000 0.00 0.00 0.00 2.01
4989 5059 7.727181 AGCATCTACAATCGGACTTAGTAAAT 58.273 34.615 0.00 0.00 0.00 1.40
4990 5060 7.868415 AGCATCTACAATCGGACTTAGTAAATC 59.132 37.037 0.00 0.00 0.00 2.17
4991 5061 7.116519 GCATCTACAATCGGACTTAGTAAATCC 59.883 40.741 0.00 0.00 0.00 3.01
4996 5066 2.251409 GGACTTAGTAAATCCGGCCC 57.749 55.000 0.00 0.00 0.00 5.80
4997 5067 1.202734 GGACTTAGTAAATCCGGCCCC 60.203 57.143 0.00 0.00 0.00 5.80
4998 5068 1.767088 GACTTAGTAAATCCGGCCCCT 59.233 52.381 0.00 0.00 0.00 4.79
4999 5069 1.767088 ACTTAGTAAATCCGGCCCCTC 59.233 52.381 0.00 0.00 0.00 4.30
5000 5070 1.766496 CTTAGTAAATCCGGCCCCTCA 59.234 52.381 0.00 0.00 0.00 3.86
5001 5071 1.882308 TAGTAAATCCGGCCCCTCAA 58.118 50.000 0.00 0.00 0.00 3.02
5002 5072 0.996583 AGTAAATCCGGCCCCTCAAA 59.003 50.000 0.00 0.00 0.00 2.69
5003 5073 1.100510 GTAAATCCGGCCCCTCAAAC 58.899 55.000 0.00 0.00 0.00 2.93
5004 5074 0.393267 TAAATCCGGCCCCTCAAACG 60.393 55.000 0.00 0.00 0.00 3.60
5005 5075 4.796495 ATCCGGCCCCTCAAACGC 62.796 66.667 0.00 0.00 0.00 4.84
5013 5083 4.430423 CCTCAAACGCGCGCAGAC 62.430 66.667 32.58 0.72 0.00 3.51
5014 5084 4.759893 CTCAAACGCGCGCAGACG 62.760 66.667 32.58 17.34 44.07 4.18
5035 5105 4.700365 CAGACGCGCGACCAGACA 62.700 66.667 39.36 0.00 0.00 3.41
5036 5106 4.702081 AGACGCGCGACCAGACAC 62.702 66.667 39.36 15.41 0.00 3.67
5043 5113 4.039357 CGACCAGACACGTCCGCT 62.039 66.667 0.00 0.00 0.00 5.52
5044 5114 2.430921 GACCAGACACGTCCGCTG 60.431 66.667 0.00 0.00 0.00 5.18
5047 5117 4.662961 CAGACACGTCCGCTGGCA 62.663 66.667 0.00 0.00 0.00 4.92
5048 5118 4.664677 AGACACGTCCGCTGGCAC 62.665 66.667 0.00 0.00 0.00 5.01
5049 5119 4.664677 GACACGTCCGCTGGCACT 62.665 66.667 0.00 0.00 0.00 4.40
5050 5120 4.969196 ACACGTCCGCTGGCACTG 62.969 66.667 0.00 0.00 0.00 3.66
5051 5121 4.662961 CACGTCCGCTGGCACTGA 62.663 66.667 0.00 0.00 0.00 3.41
5052 5122 4.664677 ACGTCCGCTGGCACTGAC 62.665 66.667 0.00 0.00 0.00 3.51
5056 5126 4.457496 CCGCTGGCACTGACCGAT 62.457 66.667 0.00 0.00 0.00 4.18
5057 5127 2.887568 CGCTGGCACTGACCGATC 60.888 66.667 0.00 0.00 0.00 3.69
5058 5128 2.265739 GCTGGCACTGACCGATCA 59.734 61.111 0.00 0.00 0.00 2.92
5059 5129 2.103042 GCTGGCACTGACCGATCAC 61.103 63.158 0.00 0.00 0.00 3.06
5060 5130 1.293179 CTGGCACTGACCGATCACA 59.707 57.895 0.00 0.00 0.00 3.58
5061 5131 1.005037 TGGCACTGACCGATCACAC 60.005 57.895 0.00 0.00 0.00 3.82
5062 5132 1.741770 GGCACTGACCGATCACACC 60.742 63.158 0.00 0.00 0.00 4.16
5063 5133 1.293498 GCACTGACCGATCACACCT 59.707 57.895 0.00 0.00 0.00 4.00
5064 5134 0.737715 GCACTGACCGATCACACCTC 60.738 60.000 0.00 0.00 0.00 3.85
5065 5135 0.603065 CACTGACCGATCACACCTCA 59.397 55.000 0.00 0.00 0.00 3.86
5066 5136 1.205655 CACTGACCGATCACACCTCAT 59.794 52.381 0.00 0.00 0.00 2.90
5067 5137 1.205655 ACTGACCGATCACACCTCATG 59.794 52.381 0.00 0.00 0.00 3.07
5068 5138 0.108186 TGACCGATCACACCTCATGC 60.108 55.000 0.00 0.00 0.00 4.06
5069 5139 0.176680 GACCGATCACACCTCATGCT 59.823 55.000 0.00 0.00 0.00 3.79
5070 5140 0.615331 ACCGATCACACCTCATGCTT 59.385 50.000 0.00 0.00 0.00 3.91
5071 5141 1.012086 CCGATCACACCTCATGCTTG 58.988 55.000 0.00 0.00 0.00 4.01
5072 5142 1.405933 CCGATCACACCTCATGCTTGA 60.406 52.381 1.92 1.92 0.00 3.02
5073 5143 2.558378 CGATCACACCTCATGCTTGAT 58.442 47.619 2.33 0.00 29.04 2.57
5074 5144 2.287103 CGATCACACCTCATGCTTGATG 59.713 50.000 2.33 3.13 27.09 3.07
5075 5145 1.456296 TCACACCTCATGCTTGATGC 58.544 50.000 2.33 0.00 43.25 3.91
5076 5146 1.003928 TCACACCTCATGCTTGATGCT 59.996 47.619 2.33 0.00 43.37 3.79
5077 5147 2.236893 TCACACCTCATGCTTGATGCTA 59.763 45.455 2.33 0.00 43.37 3.49
5078 5148 3.118149 TCACACCTCATGCTTGATGCTAT 60.118 43.478 2.33 0.00 43.37 2.97
5079 5149 3.003378 CACACCTCATGCTTGATGCTATG 59.997 47.826 2.33 0.00 43.37 2.23
5080 5150 2.031069 CACCTCATGCTTGATGCTATGC 60.031 50.000 2.33 0.00 43.37 3.14
5081 5151 2.227194 CCTCATGCTTGATGCTATGCA 58.773 47.619 2.33 0.00 44.86 3.96
5094 5164 4.882842 TGCTATGCATCCGAATACCTAA 57.117 40.909 0.19 0.00 31.71 2.69
5095 5165 5.420725 TGCTATGCATCCGAATACCTAAT 57.579 39.130 0.19 0.00 31.71 1.73
5096 5166 6.538945 TGCTATGCATCCGAATACCTAATA 57.461 37.500 0.19 0.00 31.71 0.98
5097 5167 7.124573 TGCTATGCATCCGAATACCTAATAT 57.875 36.000 0.19 0.00 31.71 1.28
5098 5168 7.564793 TGCTATGCATCCGAATACCTAATATT 58.435 34.615 0.19 0.00 32.68 1.28
5099 5169 8.046708 TGCTATGCATCCGAATACCTAATATTT 58.953 33.333 0.19 0.00 31.10 1.40
5100 5170 8.552034 GCTATGCATCCGAATACCTAATATTTC 58.448 37.037 0.19 0.00 33.37 2.17
5101 5171 9.599866 CTATGCATCCGAATACCTAATATTTCA 57.400 33.333 0.19 0.00 33.37 2.69
5103 5173 8.492673 TGCATCCGAATACCTAATATTTCATC 57.507 34.615 0.00 0.00 33.37 2.92
5104 5174 7.552687 TGCATCCGAATACCTAATATTTCATCC 59.447 37.037 0.00 0.00 33.37 3.51
5105 5175 7.770897 GCATCCGAATACCTAATATTTCATCCT 59.229 37.037 0.00 0.00 33.37 3.24
5106 5176 9.672673 CATCCGAATACCTAATATTTCATCCTT 57.327 33.333 0.00 0.00 33.37 3.36
5122 5192 8.833231 TTTCATCCTTTAGATCCATACGAATC 57.167 34.615 0.00 0.00 30.59 2.52
5123 5193 7.539034 TCATCCTTTAGATCCATACGAATCA 57.461 36.000 0.00 0.00 30.59 2.57
5124 5194 8.138928 TCATCCTTTAGATCCATACGAATCAT 57.861 34.615 0.00 0.00 30.59 2.45
5125 5195 9.255029 TCATCCTTTAGATCCATACGAATCATA 57.745 33.333 0.00 0.00 30.59 2.15
5126 5196 9.875691 CATCCTTTAGATCCATACGAATCATAA 57.124 33.333 0.00 0.00 30.59 1.90
5128 5198 9.929180 TCCTTTAGATCCATACGAATCATAAAG 57.071 33.333 0.00 0.00 0.00 1.85
5129 5199 9.155975 CCTTTAGATCCATACGAATCATAAAGG 57.844 37.037 0.00 0.00 39.89 3.11
5130 5200 9.929180 CTTTAGATCCATACGAATCATAAAGGA 57.071 33.333 0.00 0.00 0.00 3.36
5132 5202 9.929180 TTAGATCCATACGAATCATAAAGGAAG 57.071 33.333 0.00 0.00 0.00 3.46
5133 5203 7.967908 AGATCCATACGAATCATAAAGGAAGT 58.032 34.615 0.00 0.00 0.00 3.01
5134 5204 8.432805 AGATCCATACGAATCATAAAGGAAGTT 58.567 33.333 0.00 0.00 0.00 2.66
5135 5205 8.608844 ATCCATACGAATCATAAAGGAAGTTC 57.391 34.615 0.00 0.00 0.00 3.01
5136 5206 6.990349 TCCATACGAATCATAAAGGAAGTTCC 59.010 38.462 14.54 14.54 36.58 3.62
5162 5232 6.085555 TGTACTACATACATCAAGCTAGCC 57.914 41.667 12.13 0.00 38.95 3.93
5163 5233 5.833667 TGTACTACATACATCAAGCTAGCCT 59.166 40.000 12.13 0.00 38.95 4.58
5164 5234 7.002276 TGTACTACATACATCAAGCTAGCCTA 58.998 38.462 12.13 0.00 38.95 3.93
5165 5235 6.978674 ACTACATACATCAAGCTAGCCTAA 57.021 37.500 12.13 0.00 0.00 2.69
5166 5236 7.361457 ACTACATACATCAAGCTAGCCTAAA 57.639 36.000 12.13 0.00 0.00 1.85
5167 5237 7.210873 ACTACATACATCAAGCTAGCCTAAAC 58.789 38.462 12.13 0.00 0.00 2.01
5168 5238 6.240549 ACATACATCAAGCTAGCCTAAACT 57.759 37.500 12.13 0.00 0.00 2.66
5169 5239 7.361457 ACATACATCAAGCTAGCCTAAACTA 57.639 36.000 12.13 0.00 0.00 2.24
5170 5240 7.792032 ACATACATCAAGCTAGCCTAAACTAA 58.208 34.615 12.13 0.00 0.00 2.24
5171 5241 8.265055 ACATACATCAAGCTAGCCTAAACTAAA 58.735 33.333 12.13 0.00 0.00 1.85
5172 5242 6.986904 ACATCAAGCTAGCCTAAACTAAAC 57.013 37.500 12.13 0.00 0.00 2.01
5173 5243 6.712276 ACATCAAGCTAGCCTAAACTAAACT 58.288 36.000 12.13 0.00 0.00 2.66
5174 5244 7.168905 ACATCAAGCTAGCCTAAACTAAACTT 58.831 34.615 12.13 0.00 0.00 2.66
5175 5245 7.334671 ACATCAAGCTAGCCTAAACTAAACTTC 59.665 37.037 12.13 0.00 0.00 3.01
5176 5246 5.867716 TCAAGCTAGCCTAAACTAAACTTCG 59.132 40.000 12.13 0.00 0.00 3.79
5177 5247 5.402997 AGCTAGCCTAAACTAAACTTCGT 57.597 39.130 12.13 0.00 0.00 3.85
5178 5248 5.169295 AGCTAGCCTAAACTAAACTTCGTG 58.831 41.667 12.13 0.00 0.00 4.35
5179 5249 4.329256 GCTAGCCTAAACTAAACTTCGTGG 59.671 45.833 2.29 0.00 0.00 4.94
5180 5250 4.347360 AGCCTAAACTAAACTTCGTGGT 57.653 40.909 0.00 0.00 0.00 4.16
5181 5251 4.313282 AGCCTAAACTAAACTTCGTGGTC 58.687 43.478 0.00 0.00 0.00 4.02
5182 5252 3.122445 GCCTAAACTAAACTTCGTGGTCG 59.878 47.826 0.00 0.00 38.55 4.79
5183 5253 3.676646 CCTAAACTAAACTTCGTGGTCGG 59.323 47.826 0.00 0.00 37.69 4.79
5184 5254 3.457610 AAACTAAACTTCGTGGTCGGA 57.542 42.857 0.00 0.00 37.69 4.55
5186 5256 2.233271 ACTAAACTTCGTGGTCGGAGA 58.767 47.619 2.87 0.00 44.73 3.71
5187 5257 2.824341 ACTAAACTTCGTGGTCGGAGAT 59.176 45.455 2.87 0.00 44.73 2.75
5188 5258 2.080286 AAACTTCGTGGTCGGAGATG 57.920 50.000 2.87 0.00 44.73 2.90
5189 5259 0.966920 AACTTCGTGGTCGGAGATGT 59.033 50.000 2.87 0.00 44.73 3.06
5190 5260 0.243907 ACTTCGTGGTCGGAGATGTG 59.756 55.000 2.87 0.00 44.73 3.21
5191 5261 1.078759 CTTCGTGGTCGGAGATGTGC 61.079 60.000 0.00 0.00 44.73 4.57
5192 5262 1.811645 TTCGTGGTCGGAGATGTGCA 61.812 55.000 0.00 0.00 40.67 4.57
5193 5263 2.094659 CGTGGTCGGAGATGTGCAC 61.095 63.158 10.75 10.75 40.67 4.57
5194 5264 1.293498 GTGGTCGGAGATGTGCACT 59.707 57.895 19.41 3.19 40.67 4.40
5195 5265 0.530744 GTGGTCGGAGATGTGCACTA 59.469 55.000 19.41 4.84 40.67 2.74
5196 5266 0.530744 TGGTCGGAGATGTGCACTAC 59.469 55.000 19.41 11.76 40.67 2.73
5197 5267 0.530744 GGTCGGAGATGTGCACTACA 59.469 55.000 19.41 0.00 44.87 2.74
5218 5288 4.778143 GTGCCGGGTGCTGGGTAG 62.778 72.222 2.18 0.00 42.00 3.18
5220 5290 4.029809 GCCGGGTGCTGGGTAGTT 62.030 66.667 2.18 0.00 36.87 2.24
5221 5291 2.046314 CCGGGTGCTGGGTAGTTG 60.046 66.667 0.00 0.00 0.00 3.16
5222 5292 2.046314 CGGGTGCTGGGTAGTTGG 60.046 66.667 0.00 0.00 0.00 3.77
5223 5293 2.589157 CGGGTGCTGGGTAGTTGGA 61.589 63.158 0.00 0.00 0.00 3.53
5224 5294 1.002502 GGGTGCTGGGTAGTTGGAC 60.003 63.158 0.00 0.00 0.00 4.02
5225 5295 1.375523 GGTGCTGGGTAGTTGGACG 60.376 63.158 0.00 0.00 0.00 4.79
5226 5296 2.033194 GTGCTGGGTAGTTGGACGC 61.033 63.158 0.00 0.00 0.00 5.19
5227 5297 2.813908 GCTGGGTAGTTGGACGCG 60.814 66.667 3.53 3.53 35.12 6.01
5228 5298 2.654877 CTGGGTAGTTGGACGCGT 59.345 61.111 13.85 13.85 35.12 6.01
5229 5299 1.445582 CTGGGTAGTTGGACGCGTC 60.446 63.158 30.67 30.67 35.12 5.19
5230 5300 2.505557 GGGTAGTTGGACGCGTCG 60.506 66.667 30.99 0.00 0.00 5.12
5231 5301 3.177249 GGTAGTTGGACGCGTCGC 61.177 66.667 30.99 23.59 0.00 5.19
5232 5302 2.429571 GTAGTTGGACGCGTCGCA 60.430 61.111 30.99 25.72 0.00 5.10
5233 5303 2.126618 TAGTTGGACGCGTCGCAG 60.127 61.111 30.99 12.40 0.00 5.18
5234 5304 3.620300 TAGTTGGACGCGTCGCAGG 62.620 63.158 30.99 4.14 0.00 4.85
5247 5317 4.847444 GCAGGGCTTCGGCTCCTC 62.847 72.222 0.00 0.00 43.82 3.71
5248 5318 4.168291 CAGGGCTTCGGCTCCTCC 62.168 72.222 0.00 0.00 43.82 4.30
5249 5319 4.406763 AGGGCTTCGGCTCCTCCT 62.407 66.667 0.00 0.00 43.82 3.69
5250 5320 3.855853 GGGCTTCGGCTCCTCCTC 61.856 72.222 0.00 0.00 41.44 3.71
5251 5321 3.855853 GGCTTCGGCTCCTCCTCC 61.856 72.222 0.00 0.00 41.44 4.30
5252 5322 2.762043 GCTTCGGCTCCTCCTCCT 60.762 66.667 0.00 0.00 38.08 3.69
5253 5323 2.791868 GCTTCGGCTCCTCCTCCTC 61.792 68.421 0.00 0.00 38.08 3.71
5254 5324 1.380515 CTTCGGCTCCTCCTCCTCA 60.381 63.158 0.00 0.00 0.00 3.86
5255 5325 0.758685 CTTCGGCTCCTCCTCCTCAT 60.759 60.000 0.00 0.00 0.00 2.90
5256 5326 0.757188 TTCGGCTCCTCCTCCTCATC 60.757 60.000 0.00 0.00 0.00 2.92
5257 5327 2.206536 CGGCTCCTCCTCCTCATCC 61.207 68.421 0.00 0.00 0.00 3.51
5258 5328 1.074926 GGCTCCTCCTCCTCATCCA 60.075 63.158 0.00 0.00 0.00 3.41
5259 5329 0.473501 GGCTCCTCCTCCTCATCCAT 60.474 60.000 0.00 0.00 0.00 3.41
5260 5330 1.203237 GGCTCCTCCTCCTCATCCATA 60.203 57.143 0.00 0.00 0.00 2.74
5261 5331 2.561755 GGCTCCTCCTCCTCATCCATAT 60.562 54.545 0.00 0.00 0.00 1.78
5262 5332 3.310214 GGCTCCTCCTCCTCATCCATATA 60.310 52.174 0.00 0.00 0.00 0.86
5263 5333 3.704061 GCTCCTCCTCCTCATCCATATAC 59.296 52.174 0.00 0.00 0.00 1.47
5264 5334 3.951037 CTCCTCCTCCTCATCCATATACG 59.049 52.174 0.00 0.00 0.00 3.06
5265 5335 2.428890 CCTCCTCCTCATCCATATACGC 59.571 54.545 0.00 0.00 0.00 4.42
5266 5336 3.092301 CTCCTCCTCATCCATATACGCA 58.908 50.000 0.00 0.00 0.00 5.24
5267 5337 3.506398 TCCTCCTCATCCATATACGCAA 58.494 45.455 0.00 0.00 0.00 4.85
5269 5339 3.257393 CTCCTCATCCATATACGCAAGC 58.743 50.000 0.00 0.00 45.62 4.01
5270 5340 1.995484 CCTCATCCATATACGCAAGCG 59.005 52.381 13.50 13.50 46.03 4.68
5280 5350 2.577112 CGCAAGCGTCTCGTCGAT 60.577 61.111 6.25 0.00 34.35 3.59
5281 5351 2.839438 CGCAAGCGTCTCGTCGATG 61.839 63.158 6.25 0.00 34.35 3.84
5285 5355 2.713770 GCGTCTCGTCGATGCCTA 59.286 61.111 0.00 0.00 46.69 3.93
5286 5356 1.654743 GCGTCTCGTCGATGCCTAC 60.655 63.158 0.00 0.00 46.69 3.18
5287 5357 1.367782 CGTCTCGTCGATGCCTACG 60.368 63.158 0.00 5.86 40.40 3.51
5288 5358 1.009900 GTCTCGTCGATGCCTACGG 60.010 63.158 0.00 0.00 39.52 4.02
5298 5368 2.508663 GCCTACGGCGTTCTCCAC 60.509 66.667 21.24 0.00 39.62 4.02
5299 5369 2.183555 CCTACGGCGTTCTCCACC 59.816 66.667 21.24 0.00 0.00 4.61
5300 5370 2.348888 CCTACGGCGTTCTCCACCT 61.349 63.158 21.24 0.00 0.00 4.00
5301 5371 1.139095 CTACGGCGTTCTCCACCTC 59.861 63.158 21.24 0.00 0.00 3.85
5302 5372 2.280823 CTACGGCGTTCTCCACCTCC 62.281 65.000 21.24 0.00 0.00 4.30
5303 5373 3.691342 CGGCGTTCTCCACCTCCA 61.691 66.667 0.00 0.00 0.00 3.86
5304 5374 2.047179 GGCGTTCTCCACCTCCAC 60.047 66.667 0.00 0.00 0.00 4.02
5305 5375 2.047179 GCGTTCTCCACCTCCACC 60.047 66.667 0.00 0.00 0.00 4.61
5306 5376 2.584391 GCGTTCTCCACCTCCACCT 61.584 63.158 0.00 0.00 0.00 4.00
5307 5377 1.592223 CGTTCTCCACCTCCACCTC 59.408 63.158 0.00 0.00 0.00 3.85
5308 5378 1.889530 CGTTCTCCACCTCCACCTCC 61.890 65.000 0.00 0.00 0.00 4.30
5309 5379 0.545548 GTTCTCCACCTCCACCTCCT 60.546 60.000 0.00 0.00 0.00 3.69
5310 5380 0.545309 TTCTCCACCTCCACCTCCTG 60.545 60.000 0.00 0.00 0.00 3.86
5311 5381 2.607750 TCCACCTCCACCTCCTGC 60.608 66.667 0.00 0.00 0.00 4.85
5312 5382 2.930019 CCACCTCCACCTCCTGCA 60.930 66.667 0.00 0.00 0.00 4.41
5313 5383 2.528818 CCACCTCCACCTCCTGCAA 61.529 63.158 0.00 0.00 0.00 4.08
5314 5384 1.455849 CACCTCCACCTCCTGCAAA 59.544 57.895 0.00 0.00 0.00 3.68
5315 5385 0.038744 CACCTCCACCTCCTGCAAAT 59.961 55.000 0.00 0.00 0.00 2.32
5316 5386 0.038744 ACCTCCACCTCCTGCAAATG 59.961 55.000 0.00 0.00 0.00 2.32
5317 5387 0.329261 CCTCCACCTCCTGCAAATGA 59.671 55.000 0.00 0.00 0.00 2.57
5318 5388 1.457346 CTCCACCTCCTGCAAATGAC 58.543 55.000 0.00 0.00 0.00 3.06
5319 5389 0.770499 TCCACCTCCTGCAAATGACA 59.230 50.000 0.00 0.00 0.00 3.58
5320 5390 1.171308 CCACCTCCTGCAAATGACAG 58.829 55.000 0.00 0.00 34.82 3.51
5321 5391 1.546323 CCACCTCCTGCAAATGACAGT 60.546 52.381 0.00 0.00 33.09 3.55
5322 5392 1.538512 CACCTCCTGCAAATGACAGTG 59.461 52.381 0.00 0.00 33.09 3.66
5323 5393 1.143684 ACCTCCTGCAAATGACAGTGT 59.856 47.619 0.00 0.00 33.09 3.55
5324 5394 2.233271 CCTCCTGCAAATGACAGTGTT 58.767 47.619 0.00 0.00 33.09 3.32
5325 5395 2.624838 CCTCCTGCAAATGACAGTGTTT 59.375 45.455 0.00 0.00 33.09 2.83
5326 5396 3.551454 CCTCCTGCAAATGACAGTGTTTG 60.551 47.826 0.00 0.00 38.13 2.93
5327 5397 2.361757 TCCTGCAAATGACAGTGTTTGG 59.638 45.455 0.00 0.00 36.19 3.28
5328 5398 2.129607 CTGCAAATGACAGTGTTTGGC 58.870 47.619 0.00 0.00 36.19 4.52
5329 5399 1.202510 TGCAAATGACAGTGTTTGGCC 60.203 47.619 0.00 0.00 36.19 5.36
5330 5400 1.069049 GCAAATGACAGTGTTTGGCCT 59.931 47.619 3.32 0.00 36.19 5.19
5331 5401 2.863704 GCAAATGACAGTGTTTGGCCTC 60.864 50.000 3.32 0.00 36.19 4.70
5332 5402 1.620822 AATGACAGTGTTTGGCCTCC 58.379 50.000 3.32 0.00 31.91 4.30
5333 5403 0.606401 ATGACAGTGTTTGGCCTCCG 60.606 55.000 3.32 0.00 31.91 4.63
5334 5404 1.070786 GACAGTGTTTGGCCTCCGA 59.929 57.895 3.32 0.00 0.00 4.55
5335 5405 1.227853 ACAGTGTTTGGCCTCCGAC 60.228 57.895 3.32 0.00 0.00 4.79
5336 5406 2.030562 AGTGTTTGGCCTCCGACG 59.969 61.111 3.32 0.00 0.00 5.12
5337 5407 3.723348 GTGTTTGGCCTCCGACGC 61.723 66.667 3.32 0.01 0.00 5.19
5344 5414 4.208686 GCCTCCGACGCCGATTCT 62.209 66.667 0.00 0.00 38.22 2.40
5345 5415 2.278857 CCTCCGACGCCGATTCTG 60.279 66.667 0.00 0.00 38.22 3.02
5346 5416 2.771639 CCTCCGACGCCGATTCTGA 61.772 63.158 0.00 0.00 38.22 3.27
5347 5417 1.360551 CTCCGACGCCGATTCTGAT 59.639 57.895 0.00 0.00 38.22 2.90
5348 5418 0.661780 CTCCGACGCCGATTCTGATC 60.662 60.000 0.00 0.00 38.22 2.92
5359 5429 2.953020 GATTCTGATCGGAGGGAATCG 58.047 52.381 4.04 0.00 36.12 3.34
5360 5430 2.067365 TTCTGATCGGAGGGAATCGA 57.933 50.000 4.04 0.00 39.79 3.59
5361 5431 1.610363 TCTGATCGGAGGGAATCGAG 58.390 55.000 0.00 0.00 38.83 4.04
5362 5432 1.133761 TCTGATCGGAGGGAATCGAGT 60.134 52.381 0.00 0.00 38.83 4.18
5363 5433 2.105993 TCTGATCGGAGGGAATCGAGTA 59.894 50.000 0.00 0.00 38.83 2.59
5364 5434 3.085533 CTGATCGGAGGGAATCGAGTAT 58.914 50.000 0.00 0.00 38.83 2.12
5365 5435 3.082548 TGATCGGAGGGAATCGAGTATC 58.917 50.000 0.00 0.00 38.83 2.24
5376 5446 4.334837 GAGTATCGCCTGCTGCTC 57.665 61.111 0.00 0.00 38.05 4.26
5377 5447 1.300542 GAGTATCGCCTGCTGCTCC 60.301 63.158 0.00 0.00 38.05 4.70
5378 5448 2.659897 GTATCGCCTGCTGCTCCG 60.660 66.667 0.00 0.96 38.05 4.63
5379 5449 4.592192 TATCGCCTGCTGCTCCGC 62.592 66.667 0.00 0.00 38.05 5.54
5389 5459 2.203112 TGCTCCGCATGCAGATCC 60.203 61.111 19.57 6.63 35.31 3.36
5390 5460 3.344215 GCTCCGCATGCAGATCCG 61.344 66.667 19.57 1.17 0.00 4.18
5391 5461 3.344215 CTCCGCATGCAGATCCGC 61.344 66.667 19.57 0.00 0.00 5.54
5646 5716 3.614399 CCCTAAGATCCACCGCATC 57.386 57.895 0.00 0.00 0.00 3.91
5647 5717 0.035458 CCCTAAGATCCACCGCATCC 59.965 60.000 0.00 0.00 0.00 3.51
5648 5718 0.319900 CCTAAGATCCACCGCATCCG 60.320 60.000 0.00 0.00 0.00 4.18
5668 5738 4.971125 GGTAGCCCCGCAGCGATC 62.971 72.222 18.75 4.49 38.01 3.69
5669 5739 4.971125 GTAGCCCCGCAGCGATCC 62.971 72.222 18.75 3.21 38.01 3.36
5675 5745 4.880537 CCGCAGCGATCCGAGCTT 62.881 66.667 18.75 0.00 44.06 3.74
5676 5746 3.326210 CGCAGCGATCCGAGCTTC 61.326 66.667 9.98 0.00 44.06 3.86
5677 5747 3.326210 GCAGCGATCCGAGCTTCG 61.326 66.667 1.12 1.12 44.06 3.79
5681 5751 2.202610 CGATCCGAGCTTCGCACA 60.203 61.111 0.00 0.00 38.82 4.57
5682 5752 1.589993 CGATCCGAGCTTCGCACAT 60.590 57.895 0.00 0.00 38.82 3.21
5683 5753 1.148157 CGATCCGAGCTTCGCACATT 61.148 55.000 0.00 0.00 38.82 2.71
5684 5754 1.009829 GATCCGAGCTTCGCACATTT 58.990 50.000 0.00 0.00 38.82 2.32
5685 5755 1.004504 GATCCGAGCTTCGCACATTTC 60.005 52.381 0.00 0.00 38.82 2.17
5686 5756 0.320334 TCCGAGCTTCGCACATTTCA 60.320 50.000 0.00 0.00 38.82 2.69
5687 5757 0.179215 CCGAGCTTCGCACATTTCAC 60.179 55.000 0.00 0.00 38.82 3.18
5688 5758 0.517132 CGAGCTTCGCACATTTCACG 60.517 55.000 0.00 0.00 31.14 4.35
5689 5759 0.179215 GAGCTTCGCACATTTCACGG 60.179 55.000 0.00 0.00 0.00 4.94
5690 5760 0.602638 AGCTTCGCACATTTCACGGA 60.603 50.000 0.00 0.00 0.00 4.69
5691 5761 0.447801 GCTTCGCACATTTCACGGAT 59.552 50.000 0.00 0.00 0.00 4.18
5692 5762 1.529826 GCTTCGCACATTTCACGGATC 60.530 52.381 0.00 0.00 0.00 3.36
5693 5763 2.002586 CTTCGCACATTTCACGGATCT 58.997 47.619 0.00 0.00 0.00 2.75
5694 5764 1.358877 TCGCACATTTCACGGATCTG 58.641 50.000 0.00 0.00 0.00 2.90
5695 5765 0.247814 CGCACATTTCACGGATCTGC 60.248 55.000 0.00 0.00 0.00 4.26
5696 5766 1.089920 GCACATTTCACGGATCTGCT 58.910 50.000 0.00 0.00 0.00 4.24
5697 5767 1.063174 GCACATTTCACGGATCTGCTC 59.937 52.381 0.00 0.00 0.00 4.26
5698 5768 2.349590 CACATTTCACGGATCTGCTCA 58.650 47.619 0.00 0.00 0.00 4.26
5699 5769 2.743664 CACATTTCACGGATCTGCTCAA 59.256 45.455 0.00 0.00 0.00 3.02
5700 5770 3.005554 ACATTTCACGGATCTGCTCAAG 58.994 45.455 0.00 0.00 0.00 3.02
5701 5771 2.099141 TTTCACGGATCTGCTCAAGG 57.901 50.000 0.00 0.00 0.00 3.61
5702 5772 1.266178 TTCACGGATCTGCTCAAGGA 58.734 50.000 0.00 0.00 0.00 3.36
5703 5773 0.820226 TCACGGATCTGCTCAAGGAG 59.180 55.000 0.00 0.00 34.56 3.69
5712 5782 2.438075 CTCAAGGAGCTGCAGCCC 60.438 66.667 34.39 31.14 43.38 5.19
5713 5783 4.399395 TCAAGGAGCTGCAGCCCG 62.399 66.667 34.39 21.05 43.38 6.13
5714 5784 4.711949 CAAGGAGCTGCAGCCCGT 62.712 66.667 34.39 27.40 43.38 5.28
5715 5785 4.711949 AAGGAGCTGCAGCCCGTG 62.712 66.667 34.39 0.00 43.38 4.94
5729 5799 2.104331 CGTGCTCCGGCGTTAGAT 59.896 61.111 6.01 0.00 42.25 1.98
5730 5800 1.357690 CGTGCTCCGGCGTTAGATA 59.642 57.895 6.01 0.00 42.25 1.98
5731 5801 0.660595 CGTGCTCCGGCGTTAGATAG 60.661 60.000 6.01 0.00 42.25 2.08
5732 5802 0.318784 GTGCTCCGGCGTTAGATAGG 60.319 60.000 6.01 0.00 42.25 2.57
5733 5803 1.289380 GCTCCGGCGTTAGATAGGG 59.711 63.158 6.01 0.00 0.00 3.53
5734 5804 1.461911 GCTCCGGCGTTAGATAGGGT 61.462 60.000 6.01 0.00 0.00 4.34
5735 5805 1.901591 CTCCGGCGTTAGATAGGGTA 58.098 55.000 6.01 0.00 0.00 3.69
5736 5806 1.811359 CTCCGGCGTTAGATAGGGTAG 59.189 57.143 6.01 0.00 0.00 3.18
5737 5807 1.143684 TCCGGCGTTAGATAGGGTAGT 59.856 52.381 6.01 0.00 0.00 2.73
5738 5808 1.959282 CCGGCGTTAGATAGGGTAGTT 59.041 52.381 6.01 0.00 0.00 2.24
5739 5809 2.030451 CCGGCGTTAGATAGGGTAGTTC 60.030 54.545 6.01 0.00 0.00 3.01
5740 5810 2.030451 CGGCGTTAGATAGGGTAGTTCC 60.030 54.545 0.00 0.00 0.00 3.62
5741 5811 3.229293 GGCGTTAGATAGGGTAGTTCCT 58.771 50.000 0.00 0.00 40.79 3.36
5742 5812 3.640498 GGCGTTAGATAGGGTAGTTCCTT 59.360 47.826 0.00 0.00 38.30 3.36
5743 5813 4.829492 GGCGTTAGATAGGGTAGTTCCTTA 59.171 45.833 0.00 0.00 38.30 2.69
5744 5814 5.278709 GGCGTTAGATAGGGTAGTTCCTTAC 60.279 48.000 0.00 0.00 38.30 2.34
5745 5815 5.278709 GCGTTAGATAGGGTAGTTCCTTACC 60.279 48.000 0.00 0.00 41.98 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 8.877864 TTTGTACTGAATTCTATGGGAATGTT 57.122 30.769 7.05 0.00 43.17 2.71
11 12 7.995488 AGGGATTCCTTTGTACTGAATTCTATG 59.005 37.037 7.05 0.00 41.56 2.23
36 37 7.331934 TGAATCACATCGGAAGACTTTTTCTAG 59.668 37.037 0.00 0.00 46.97 2.43
45 46 7.867909 TCATAGTATTGAATCACATCGGAAGAC 59.132 37.037 0.00 0.00 46.97 3.01
47 48 8.593492 TTCATAGTATTGAATCACATCGGAAG 57.407 34.615 0.00 0.00 30.82 3.46
93 94 7.882755 TGGAGGATGGGAATACTTAGAATTTT 58.117 34.615 0.00 0.00 0.00 1.82
98 99 7.350921 AGAAATTGGAGGATGGGAATACTTAGA 59.649 37.037 0.00 0.00 0.00 2.10
101 102 6.347061 AGAAATTGGAGGATGGGAATACTT 57.653 37.500 0.00 0.00 0.00 2.24
108 109 7.422465 TTTCATAAAGAAATTGGAGGATGGG 57.578 36.000 0.00 0.00 41.17 4.00
109 110 9.538508 GATTTTCATAAAGAAATTGGAGGATGG 57.461 33.333 0.00 0.00 45.15 3.51
145 146 2.991540 GGCTTTCAGGGCCGCTTT 60.992 61.111 0.00 0.00 40.19 3.51
186 187 1.891919 TGTCGTTGTGAGCCTTGCC 60.892 57.895 0.00 0.00 0.00 4.52
189 190 1.014352 GTTGTGTCGTTGTGAGCCTT 58.986 50.000 0.00 0.00 0.00 4.35
191 192 0.730265 TTGTTGTGTCGTTGTGAGCC 59.270 50.000 0.00 0.00 0.00 4.70
227 228 0.179000 AATTCAGCTCGCCCTACTGG 59.821 55.000 0.00 0.00 32.19 4.00
229 230 2.359900 CAAAATTCAGCTCGCCCTACT 58.640 47.619 0.00 0.00 0.00 2.57
231 232 1.094785 GCAAAATTCAGCTCGCCCTA 58.905 50.000 0.00 0.00 0.00 3.53
248 249 2.698274 TGTTTAGAGAGTGTCACTGGCA 59.302 45.455 11.04 0.00 0.00 4.92
249 250 3.386768 TGTTTAGAGAGTGTCACTGGC 57.613 47.619 11.04 1.77 0.00 4.85
251 252 4.310769 CCCTTGTTTAGAGAGTGTCACTG 58.689 47.826 11.04 0.00 0.00 3.66
252 253 3.325135 CCCCTTGTTTAGAGAGTGTCACT 59.675 47.826 4.81 4.81 0.00 3.41
253 254 3.665190 CCCCTTGTTTAGAGAGTGTCAC 58.335 50.000 0.00 0.00 0.00 3.67
254 255 2.038557 GCCCCTTGTTTAGAGAGTGTCA 59.961 50.000 0.00 0.00 0.00 3.58
255 256 2.701107 GCCCCTTGTTTAGAGAGTGTC 58.299 52.381 0.00 0.00 0.00 3.67
256 257 1.002087 CGCCCCTTGTTTAGAGAGTGT 59.998 52.381 0.00 0.00 0.00 3.55
257 258 1.676014 CCGCCCCTTGTTTAGAGAGTG 60.676 57.143 0.00 0.00 0.00 3.51
258 259 0.613777 CCGCCCCTTGTTTAGAGAGT 59.386 55.000 0.00 0.00 0.00 3.24
259 260 0.744771 GCCGCCCCTTGTTTAGAGAG 60.745 60.000 0.00 0.00 0.00 3.20
261 262 1.749258 GGCCGCCCCTTGTTTAGAG 60.749 63.158 0.00 0.00 0.00 2.43
262 263 2.353573 GGCCGCCCCTTGTTTAGA 59.646 61.111 0.00 0.00 0.00 2.10
263 264 2.034999 TGGCCGCCCCTTGTTTAG 59.965 61.111 7.03 0.00 0.00 1.85
264 265 2.282603 GTGGCCGCCCCTTGTTTA 60.283 61.111 4.45 0.00 0.00 2.01
295 296 4.299586 TGTGAAAGCCCACTAATGATGA 57.700 40.909 0.00 0.00 37.89 2.92
297 298 4.460382 CAGTTGTGAAAGCCCACTAATGAT 59.540 41.667 7.28 0.00 39.10 2.45
298 299 3.820467 CAGTTGTGAAAGCCCACTAATGA 59.180 43.478 7.28 0.00 39.10 2.57
299 300 3.569701 ACAGTTGTGAAAGCCCACTAATG 59.430 43.478 10.08 10.08 41.20 1.90
300 301 3.832527 ACAGTTGTGAAAGCCCACTAAT 58.167 40.909 0.00 0.00 37.89 1.73
301 302 3.290948 ACAGTTGTGAAAGCCCACTAA 57.709 42.857 0.00 0.00 37.89 2.24
302 303 3.244422 CCTACAGTTGTGAAAGCCCACTA 60.244 47.826 0.00 0.00 37.89 2.74
303 304 2.487265 CCTACAGTTGTGAAAGCCCACT 60.487 50.000 0.00 0.00 37.89 4.00
304 305 1.880027 CCTACAGTTGTGAAAGCCCAC 59.120 52.381 0.00 0.00 37.55 4.61
305 306 1.202879 CCCTACAGTTGTGAAAGCCCA 60.203 52.381 0.00 0.00 0.00 5.36
306 307 1.534729 CCCTACAGTTGTGAAAGCCC 58.465 55.000 0.00 0.00 0.00 5.19
307 308 0.881796 GCCCTACAGTTGTGAAAGCC 59.118 55.000 0.00 0.00 0.00 4.35
308 309 0.517316 CGCCCTACAGTTGTGAAAGC 59.483 55.000 0.00 0.00 0.00 3.51
309 310 1.156736 CCGCCCTACAGTTGTGAAAG 58.843 55.000 0.00 0.00 0.00 2.62
310 311 0.887387 GCCGCCCTACAGTTGTGAAA 60.887 55.000 0.00 0.00 0.00 2.69
311 312 1.302192 GCCGCCCTACAGTTGTGAA 60.302 57.895 0.00 0.00 0.00 3.18
312 313 2.345991 GCCGCCCTACAGTTGTGA 59.654 61.111 0.00 0.00 0.00 3.58
313 314 2.746277 GGCCGCCCTACAGTTGTG 60.746 66.667 0.00 0.00 0.00 3.33
314 315 2.602676 ATGGCCGCCCTACAGTTGT 61.603 57.895 7.03 0.00 0.00 3.32
315 316 2.114670 CATGGCCGCCCTACAGTTG 61.115 63.158 7.03 0.00 0.00 3.16
316 317 1.847798 TTCATGGCCGCCCTACAGTT 61.848 55.000 7.03 0.00 0.00 3.16
317 318 1.635817 ATTCATGGCCGCCCTACAGT 61.636 55.000 7.03 0.00 0.00 3.55
318 319 0.466189 AATTCATGGCCGCCCTACAG 60.466 55.000 7.03 0.00 0.00 2.74
319 320 0.033601 AAATTCATGGCCGCCCTACA 60.034 50.000 7.03 0.00 0.00 2.74
320 321 0.385390 CAAATTCATGGCCGCCCTAC 59.615 55.000 7.03 0.00 0.00 3.18
321 322 1.391157 GCAAATTCATGGCCGCCCTA 61.391 55.000 7.03 0.00 0.00 3.53
322 323 2.724273 GCAAATTCATGGCCGCCCT 61.724 57.895 7.03 0.00 0.00 5.19
323 324 2.202919 GCAAATTCATGGCCGCCC 60.203 61.111 7.03 0.00 0.00 6.13
324 325 2.202919 GGCAAATTCATGGCCGCC 60.203 61.111 1.04 1.04 39.79 6.13
328 329 3.446507 CCACTGGCAAATTCATGGC 57.553 52.632 0.00 0.00 45.44 4.40
339 340 1.375268 GAGAGAGTGTGCCACTGGC 60.375 63.158 13.68 13.68 45.44 4.85
340 341 0.612229 ATGAGAGAGTGTGCCACTGG 59.388 55.000 11.89 0.00 45.44 4.00
341 342 3.599730 TTATGAGAGAGTGTGCCACTG 57.400 47.619 11.89 0.00 45.44 3.66
343 344 3.620374 CACATTATGAGAGAGTGTGCCAC 59.380 47.826 0.00 0.00 34.50 5.01
344 345 3.369787 CCACATTATGAGAGAGTGTGCCA 60.370 47.826 0.00 0.00 38.97 4.92
345 346 3.201290 CCACATTATGAGAGAGTGTGCC 58.799 50.000 0.00 0.00 38.97 5.01
346 347 3.118629 TCCCACATTATGAGAGAGTGTGC 60.119 47.826 0.00 0.00 38.97 4.57
347 348 4.743057 TCCCACATTATGAGAGAGTGTG 57.257 45.455 0.00 0.00 39.76 3.82
348 349 5.013079 TGTTTCCCACATTATGAGAGAGTGT 59.987 40.000 0.00 0.00 0.00 3.55
349 350 5.352569 GTGTTTCCCACATTATGAGAGAGTG 59.647 44.000 0.00 0.00 43.92 3.51
350 351 5.491982 GTGTTTCCCACATTATGAGAGAGT 58.508 41.667 0.00 0.00 43.92 3.24
425 426 5.750524 AGAAGAAAATAGAGAAGAAGGGGC 58.249 41.667 0.00 0.00 0.00 5.80
459 460 3.460648 AGCTAACGCTGGGAACATC 57.539 52.632 0.00 0.00 46.86 3.06
506 508 3.197790 CATTGGACCAGCTCGGCG 61.198 66.667 0.00 0.00 39.03 6.46
583 585 3.071206 GGCTGCACGGGAGAGAGA 61.071 66.667 0.50 0.00 0.00 3.10
585 587 3.385384 CTGGCTGCACGGGAGAGA 61.385 66.667 0.50 0.00 0.00 3.10
752 762 2.100879 CTATAGTGGTGGCGAGGGGC 62.101 65.000 0.00 0.00 42.51 5.80
815 825 2.034376 AGCGGAGAGTGACGAGGT 59.966 61.111 0.00 0.00 0.00 3.85
816 826 2.766400 GGAGCGGAGAGTGACGAGG 61.766 68.421 0.00 0.00 0.00 4.63
818 828 2.033602 TGGAGCGGAGAGTGACGA 59.966 61.111 0.00 0.00 0.00 4.20
820 830 0.109039 GAAGTGGAGCGGAGAGTGAC 60.109 60.000 0.00 0.00 0.00 3.67
821 831 1.251527 GGAAGTGGAGCGGAGAGTGA 61.252 60.000 0.00 0.00 0.00 3.41
822 832 1.216710 GGAAGTGGAGCGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
823 833 1.985116 GGGAAGTGGAGCGGAGAGT 60.985 63.158 0.00 0.00 0.00 3.24
824 834 2.726351 GGGGAAGTGGAGCGGAGAG 61.726 68.421 0.00 0.00 0.00 3.20
825 835 2.683933 GGGGAAGTGGAGCGGAGA 60.684 66.667 0.00 0.00 0.00 3.71
826 836 2.685380 AGGGGAAGTGGAGCGGAG 60.685 66.667 0.00 0.00 0.00 4.63
827 837 2.683933 GAGGGGAAGTGGAGCGGA 60.684 66.667 0.00 0.00 0.00 5.54
842 852 2.689573 TATGGGTGGGGATCCGGGAG 62.690 65.000 5.45 0.00 35.24 4.30
847 857 0.328258 CGGAATATGGGTGGGGATCC 59.672 60.000 1.92 1.92 0.00 3.36
981 991 4.006319 CCATTGTTCCTCCTTCTCAAGAC 58.994 47.826 0.00 0.00 0.00 3.01
995 1005 1.710339 GACGAGAGCGCCATTGTTC 59.290 57.895 2.29 0.00 42.48 3.18
1110 1123 1.457643 AGGAGGCGTATGCTGGCTA 60.458 57.895 6.92 0.00 42.99 3.93
1113 1126 1.068753 CAGAGGAGGCGTATGCTGG 59.931 63.158 6.92 0.00 42.25 4.85
1277 1290 0.880278 GCCTGCTCGCCAAATCGATA 60.880 55.000 0.00 0.00 37.87 2.92
1310 1323 1.369091 GACGCAGAAATGCCGGATGT 61.369 55.000 5.05 0.00 0.00 3.06
1312 1325 2.173669 CGACGCAGAAATGCCGGAT 61.174 57.895 5.05 0.00 0.00 4.18
1381 1394 0.677842 GGTAGTTGACGGTGTCCAGT 59.322 55.000 0.00 0.00 0.00 4.00
1605 1618 5.402270 GTGCATTGTTAATTTGTCGAGCTTT 59.598 36.000 0.00 0.00 0.00 3.51
1720 1733 2.509336 GCACGGTCCATCAGTCGG 60.509 66.667 0.00 0.00 0.00 4.79
1825 1838 2.357034 TTGACGAAGCCGGACAGC 60.357 61.111 5.05 0.00 40.78 4.40
1876 1889 4.269523 GTGGTGGAGCTGTGGCCA 62.270 66.667 0.00 0.00 39.73 5.36
1916 1929 5.366477 TCATAATCAGATGCAGAGGTGGTTA 59.634 40.000 0.00 0.00 0.00 2.85
1953 1967 1.798223 CACCGCAGATTTTTCACGAGA 59.202 47.619 0.00 0.00 0.00 4.04
1970 1984 1.353076 GATTACCACGTCCGTTCACC 58.647 55.000 0.00 0.00 0.00 4.02
1993 2007 4.059459 GAGAACCACGCGCACACG 62.059 66.667 5.73 0.00 44.07 4.49
2001 2015 1.450312 GCCATCCCTGAGAACCACG 60.450 63.158 0.00 0.00 0.00 4.94
2008 2022 4.227134 CCGACGGCCATCCCTGAG 62.227 72.222 2.24 0.00 0.00 3.35
2316 2330 3.506455 CCGTACTATCTATGGAGTGTGGG 59.494 52.174 0.00 0.00 0.00 4.61
2317 2331 3.057456 GCCGTACTATCTATGGAGTGTGG 60.057 52.174 0.00 0.00 0.00 4.17
2413 2428 3.234386 GCACACGACTTGCTATTTTTCC 58.766 45.455 0.00 0.00 37.00 3.13
2422 2442 2.500369 CATGCGCACACGACTTGC 60.500 61.111 14.90 0.00 43.93 4.01
2513 2543 6.805271 TGACACGTTTGGTTCGATTTTAAAAA 59.195 30.769 4.44 0.00 0.00 1.94
2580 2610 6.587990 CGATTTTGGCATGTACCATACAAAAA 59.412 34.615 16.16 7.31 42.76 1.94
2666 2697 1.345741 TGGTGGATGCATAGCTAGAGC 59.654 52.381 12.66 12.66 42.49 4.09
2699 2730 7.925043 GCACTAGATATGCTACTCTAGGTTA 57.075 40.000 16.25 0.00 43.42 2.85
2761 2792 7.374975 TGTTATGATACTCCCTTCCCTTAAG 57.625 40.000 0.00 0.00 34.73 1.85
2764 2795 5.398012 GCTTGTTATGATACTCCCTTCCCTT 60.398 44.000 0.00 0.00 0.00 3.95
2843 2876 8.794335 AGAAAAGAAATACACCTATGTCCTTC 57.206 34.615 0.00 0.00 40.48 3.46
2986 3019 1.870064 AGTTAGGGCCGCCTAGTTTA 58.130 50.000 9.86 0.00 0.00 2.01
2987 3020 1.870064 TAGTTAGGGCCGCCTAGTTT 58.130 50.000 9.86 0.00 0.00 2.66
2988 3021 1.483827 GTTAGTTAGGGCCGCCTAGTT 59.516 52.381 9.86 0.00 0.00 2.24
2989 3022 1.117994 GTTAGTTAGGGCCGCCTAGT 58.882 55.000 9.86 1.12 0.00 2.57
3012 3045 1.735360 CCGGCCCAGCAATGTAATG 59.265 57.895 0.00 0.00 0.00 1.90
3030 3063 3.068691 GGCCCTTTTCCTTCCGCC 61.069 66.667 0.00 0.00 0.00 6.13
3068 3101 0.110419 TGAGCATACAAAACACGCGC 60.110 50.000 5.73 0.00 0.00 6.86
3081 3114 0.463204 CGTCACTCCCTGATGAGCAT 59.537 55.000 0.00 0.00 38.06 3.79
3370 3403 7.503230 TGGTGCTTGATGATTCATGTATGTTAT 59.497 33.333 3.32 0.00 31.38 1.89
3382 3419 1.647545 CGCGGTGGTGCTTGATGATT 61.648 55.000 0.00 0.00 0.00 2.57
3385 3422 3.027170 GACGCGGTGGTGCTTGATG 62.027 63.158 12.47 0.00 0.00 3.07
3386 3423 2.731691 AAGACGCGGTGGTGCTTGAT 62.732 55.000 12.47 0.00 0.00 2.57
3387 3424 2.933878 AAAGACGCGGTGGTGCTTGA 62.934 55.000 12.47 0.00 0.00 3.02
3388 3425 2.443957 GAAAGACGCGGTGGTGCTTG 62.444 60.000 12.47 0.00 0.00 4.01
3389 3426 2.203153 AAAGACGCGGTGGTGCTT 60.203 55.556 12.47 0.81 0.00 3.91
3391 3428 2.251642 AAGAAAGACGCGGTGGTGC 61.252 57.895 12.47 0.00 0.00 5.01
3392 3429 1.569493 CAAGAAAGACGCGGTGGTG 59.431 57.895 12.47 0.00 0.00 4.17
3393 3430 2.251642 GCAAGAAAGACGCGGTGGT 61.252 57.895 12.47 0.00 0.00 4.16
3394 3431 1.577328 ATGCAAGAAAGACGCGGTGG 61.577 55.000 12.47 0.00 0.00 4.61
3396 3433 0.951558 AAATGCAAGAAAGACGCGGT 59.048 45.000 12.47 0.00 0.00 5.68
3397 3434 1.069296 TGAAATGCAAGAAAGACGCGG 60.069 47.619 12.47 0.00 0.00 6.46
3398 3435 2.314561 TGAAATGCAAGAAAGACGCG 57.685 45.000 3.53 3.53 0.00 6.01
3399 3436 2.919229 CCATGAAATGCAAGAAAGACGC 59.081 45.455 0.00 0.00 44.97 5.19
3400 3437 4.424061 TCCATGAAATGCAAGAAAGACG 57.576 40.909 0.00 0.00 44.97 4.18
3401 3438 5.957798 TCATCCATGAAATGCAAGAAAGAC 58.042 37.500 0.00 0.00 44.97 3.01
3402 3439 6.593268 TTCATCCATGAAATGCAAGAAAGA 57.407 33.333 0.00 0.00 44.97 2.52
3422 3459 8.087750 TGTATGATAGTGCATATGAACGATTCA 58.912 33.333 10.47 12.95 45.01 2.57
3423 3460 8.466086 TGTATGATAGTGCATATGAACGATTC 57.534 34.615 10.47 8.37 33.67 2.52
3425 3462 9.741647 CTATGTATGATAGTGCATATGAACGAT 57.258 33.333 9.05 9.05 33.67 3.73
3426 3463 8.190784 CCTATGTATGATAGTGCATATGAACGA 58.809 37.037 6.97 2.39 33.67 3.85
3427 3464 7.436376 CCCTATGTATGATAGTGCATATGAACG 59.564 40.741 6.97 0.00 33.67 3.95
3428 3465 7.712639 CCCCTATGTATGATAGTGCATATGAAC 59.287 40.741 6.97 6.25 33.67 3.18
3429 3466 7.623278 TCCCCTATGTATGATAGTGCATATGAA 59.377 37.037 6.97 0.00 33.67 2.57
3430 3467 7.132128 TCCCCTATGTATGATAGTGCATATGA 58.868 38.462 6.97 0.00 33.67 2.15
3431 3468 7.070447 ACTCCCCTATGTATGATAGTGCATATG 59.930 40.741 0.00 0.00 33.67 1.78
3432 3469 7.070447 CACTCCCCTATGTATGATAGTGCATAT 59.930 40.741 0.00 0.00 33.67 1.78
3433 3470 6.381133 CACTCCCCTATGTATGATAGTGCATA 59.619 42.308 0.00 0.00 0.00 3.14
3434 3471 5.188555 CACTCCCCTATGTATGATAGTGCAT 59.811 44.000 0.00 0.00 0.00 3.96
3435 3472 4.528206 CACTCCCCTATGTATGATAGTGCA 59.472 45.833 0.00 0.00 0.00 4.57
3436 3473 4.528596 ACACTCCCCTATGTATGATAGTGC 59.471 45.833 0.00 0.00 37.25 4.40
3437 3474 7.776618 TTACACTCCCCTATGTATGATAGTG 57.223 40.000 0.00 0.00 39.14 2.74
3438 3475 8.974292 AATTACACTCCCCTATGTATGATAGT 57.026 34.615 0.00 0.00 31.55 2.12
3440 3477 8.978472 GCTAATTACACTCCCCTATGTATGATA 58.022 37.037 0.00 0.00 31.55 2.15
3447 3484 5.552870 ACAGCTAATTACACTCCCCTATG 57.447 43.478 0.00 0.00 0.00 2.23
3457 3494 8.625651 ACACACAACAATTAACAGCTAATTACA 58.374 29.630 0.00 0.00 38.00 2.41
3458 3495 8.901748 CACACACAACAATTAACAGCTAATTAC 58.098 33.333 0.00 0.00 38.00 1.89
3466 3503 5.984627 TCGATCACACACAACAATTAACAG 58.015 37.500 0.00 0.00 0.00 3.16
3467 3504 5.993106 TCGATCACACACAACAATTAACA 57.007 34.783 0.00 0.00 0.00 2.41
3468 3505 6.021596 GGATCGATCACACACAACAATTAAC 58.978 40.000 25.93 0.00 0.00 2.01
3469 3506 5.703130 TGGATCGATCACACACAACAATTAA 59.297 36.000 25.93 0.00 0.00 1.40
3470 3507 5.241662 TGGATCGATCACACACAACAATTA 58.758 37.500 25.93 0.00 0.00 1.40
3471 3508 4.071423 TGGATCGATCACACACAACAATT 58.929 39.130 25.93 0.00 0.00 2.32
3472 3509 3.673902 TGGATCGATCACACACAACAAT 58.326 40.909 25.93 0.00 0.00 2.71
3473 3510 3.118905 TGGATCGATCACACACAACAA 57.881 42.857 25.93 0.00 0.00 2.83
3474 3511 2.829741 TGGATCGATCACACACAACA 57.170 45.000 25.93 9.85 0.00 3.33
3475 3512 2.352651 CCATGGATCGATCACACACAAC 59.647 50.000 25.93 7.35 0.00 3.32
3476 3513 2.631267 CCATGGATCGATCACACACAA 58.369 47.619 25.93 3.68 0.00 3.33
3551 3588 3.420397 GGTGTAGGACAGCGTCTTC 57.580 57.895 8.26 1.95 36.84 2.87
3767 3804 1.320344 ACGAGGAGTAGATGGCGCAA 61.320 55.000 10.83 0.00 0.00 4.85
4067 4104 1.873863 GGCGGTGCCTTTGTAGTTC 59.126 57.895 0.00 0.00 46.69 3.01
4110 4147 4.582701 AATCTGCTCTCGGAGTTATGAG 57.417 45.455 4.69 0.00 31.39 2.90
4149 4186 2.223363 ACATGCGTAGATCAGTCGTCAG 60.223 50.000 0.00 0.00 0.00 3.51
4151 4188 2.476873 ACATGCGTAGATCAGTCGTC 57.523 50.000 0.00 0.00 0.00 4.20
4166 4216 3.499737 GCCGACCTGCCGAACATG 61.500 66.667 0.00 0.00 0.00 3.21
4477 4532 7.010367 TGTCTGAAAAATTGACAATGTTGCTTC 59.990 33.333 9.99 3.24 37.71 3.86
4507 4562 1.348036 TCTCTGAGTCTCTGTCCGTCA 59.652 52.381 4.32 0.00 0.00 4.35
4520 4575 3.057596 GTGTTGGTCTCTGACTCTCTGAG 60.058 52.174 0.00 0.00 41.87 3.35
4521 4576 2.887783 GTGTTGGTCTCTGACTCTCTGA 59.112 50.000 0.00 0.00 32.47 3.27
4522 4577 2.890311 AGTGTTGGTCTCTGACTCTCTG 59.110 50.000 0.00 0.00 32.47 3.35
4524 4579 2.887783 TCAGTGTTGGTCTCTGACTCTC 59.112 50.000 0.00 0.00 40.35 3.20
4534 4589 2.279918 ACGCCGTCAGTGTTGGTC 60.280 61.111 5.51 0.00 34.89 4.02
4537 4592 1.591594 ACTCACGCCGTCAGTGTTG 60.592 57.895 0.00 0.00 36.98 3.33
4546 4613 0.179127 ATCATCAGTCACTCACGCCG 60.179 55.000 0.00 0.00 0.00 6.46
4552 4619 9.125906 CAAAGAAAAATTCATCATCAGTCACTC 57.874 33.333 0.00 0.00 0.00 3.51
4603 4671 0.815734 CGATGTACTTGTCGGGGAGT 59.184 55.000 0.00 0.00 34.39 3.85
4758 4826 1.342819 CTCTATAGGAGGCAGCACACC 59.657 57.143 0.00 0.00 38.35 4.16
4803 4871 4.208047 CGCGGACTAATCTTTCTGAATCAG 59.792 45.833 3.38 3.38 0.00 2.90
4813 4881 3.587797 TTTCTGACGCGGACTAATCTT 57.412 42.857 12.47 0.00 0.00 2.40
4823 4891 5.810525 AGGATCATTTAATTTTCTGACGCG 58.189 37.500 3.53 3.53 0.00 6.01
4860 4928 4.261447 GCACCAAAGAACGAAAACTACCAT 60.261 41.667 0.00 0.00 0.00 3.55
4910 4980 3.070446 ACGTATGTGTCCACTCCAAGAAA 59.930 43.478 0.00 0.00 0.00 2.52
4914 4984 2.103432 ACAACGTATGTGTCCACTCCAA 59.897 45.455 0.00 0.00 41.93 3.53
4953 5023 8.367911 TCCGATTGTAGATGCTCTTATAAACAT 58.632 33.333 0.00 0.00 0.00 2.71
4957 5027 7.526142 AGTCCGATTGTAGATGCTCTTATAA 57.474 36.000 0.00 0.00 0.00 0.98
4958 5028 7.526142 AAGTCCGATTGTAGATGCTCTTATA 57.474 36.000 0.00 0.00 0.00 0.98
4959 5029 6.412362 AAGTCCGATTGTAGATGCTCTTAT 57.588 37.500 0.00 0.00 0.00 1.73
4960 5030 5.854010 AAGTCCGATTGTAGATGCTCTTA 57.146 39.130 0.00 0.00 0.00 2.10
4961 5031 4.744795 AAGTCCGATTGTAGATGCTCTT 57.255 40.909 0.00 0.00 0.00 2.85
4962 5032 4.890581 ACTAAGTCCGATTGTAGATGCTCT 59.109 41.667 0.00 0.00 0.00 4.09
4963 5033 5.189659 ACTAAGTCCGATTGTAGATGCTC 57.810 43.478 0.00 0.00 0.00 4.26
4964 5034 6.710597 TTACTAAGTCCGATTGTAGATGCT 57.289 37.500 0.00 0.00 0.00 3.79
4965 5035 7.116519 GGATTTACTAAGTCCGATTGTAGATGC 59.883 40.741 0.00 0.00 0.00 3.91
4966 5036 8.522178 GGATTTACTAAGTCCGATTGTAGATG 57.478 38.462 0.00 0.00 0.00 2.90
4977 5047 1.202734 GGGGCCGGATTTACTAAGTCC 60.203 57.143 5.05 1.03 0.00 3.85
4978 5048 1.767088 AGGGGCCGGATTTACTAAGTC 59.233 52.381 5.05 0.00 0.00 3.01
4979 5049 1.767088 GAGGGGCCGGATTTACTAAGT 59.233 52.381 5.05 0.00 0.00 2.24
4980 5050 1.766496 TGAGGGGCCGGATTTACTAAG 59.234 52.381 5.05 0.00 0.00 2.18
4981 5051 1.882308 TGAGGGGCCGGATTTACTAA 58.118 50.000 5.05 0.00 0.00 2.24
4982 5052 1.882308 TTGAGGGGCCGGATTTACTA 58.118 50.000 5.05 0.00 0.00 1.82
4983 5053 0.996583 TTTGAGGGGCCGGATTTACT 59.003 50.000 5.05 0.00 0.00 2.24
4984 5054 1.100510 GTTTGAGGGGCCGGATTTAC 58.899 55.000 5.05 0.00 0.00 2.01
4985 5055 0.393267 CGTTTGAGGGGCCGGATTTA 60.393 55.000 5.05 0.00 0.00 1.40
4986 5056 1.677633 CGTTTGAGGGGCCGGATTT 60.678 57.895 5.05 0.00 0.00 2.17
4987 5057 2.045340 CGTTTGAGGGGCCGGATT 60.045 61.111 5.05 0.00 0.00 3.01
4988 5058 4.796495 GCGTTTGAGGGGCCGGAT 62.796 66.667 5.05 0.00 0.00 4.18
4996 5066 4.430423 GTCTGCGCGCGTTTGAGG 62.430 66.667 32.35 14.49 0.00 3.86
4997 5067 4.759893 CGTCTGCGCGCGTTTGAG 62.760 66.667 32.35 20.74 0.00 3.02
5018 5088 4.700365 TGTCTGGTCGCGCGTCTG 62.700 66.667 30.98 23.97 0.00 3.51
5019 5089 4.702081 GTGTCTGGTCGCGCGTCT 62.702 66.667 30.98 0.00 0.00 4.18
5026 5096 4.039357 AGCGGACGTGTCTGGTCG 62.039 66.667 7.68 0.40 42.46 4.79
5027 5097 2.430921 CAGCGGACGTGTCTGGTC 60.431 66.667 10.41 0.00 44.06 4.02
5028 5098 3.991051 CCAGCGGACGTGTCTGGT 61.991 66.667 15.47 7.68 46.53 4.00
5030 5100 4.662961 TGCCAGCGGACGTGTCTG 62.663 66.667 0.00 4.43 38.96 3.51
5031 5101 4.664677 GTGCCAGCGGACGTGTCT 62.665 66.667 0.00 0.00 0.00 3.41
5032 5102 4.664677 AGTGCCAGCGGACGTGTC 62.665 66.667 0.00 0.00 0.00 3.67
5033 5103 4.969196 CAGTGCCAGCGGACGTGT 62.969 66.667 0.00 0.00 0.00 4.49
5034 5104 4.662961 TCAGTGCCAGCGGACGTG 62.663 66.667 0.00 0.00 0.00 4.49
5035 5105 4.664677 GTCAGTGCCAGCGGACGT 62.665 66.667 0.00 0.00 0.00 4.34
5039 5109 4.457496 ATCGGTCAGTGCCAGCGG 62.457 66.667 3.93 0.00 35.47 5.52
5040 5110 2.887568 GATCGGTCAGTGCCAGCG 60.888 66.667 0.00 1.35 36.08 5.18
5041 5111 2.103042 GTGATCGGTCAGTGCCAGC 61.103 63.158 0.00 0.00 34.36 4.85
5042 5112 1.016130 GTGTGATCGGTCAGTGCCAG 61.016 60.000 0.00 0.00 34.36 4.85
5043 5113 1.005037 GTGTGATCGGTCAGTGCCA 60.005 57.895 0.00 0.00 34.36 4.92
5044 5114 1.741770 GGTGTGATCGGTCAGTGCC 60.742 63.158 0.00 0.00 34.36 5.01
5045 5115 0.737715 GAGGTGTGATCGGTCAGTGC 60.738 60.000 0.00 0.00 34.36 4.40
5046 5116 0.603065 TGAGGTGTGATCGGTCAGTG 59.397 55.000 0.00 0.00 34.36 3.66
5047 5117 1.205655 CATGAGGTGTGATCGGTCAGT 59.794 52.381 0.00 0.00 34.36 3.41
5048 5118 1.931906 CATGAGGTGTGATCGGTCAG 58.068 55.000 0.00 0.00 34.36 3.51
5049 5119 0.108186 GCATGAGGTGTGATCGGTCA 60.108 55.000 0.00 0.00 0.00 4.02
5050 5120 0.176680 AGCATGAGGTGTGATCGGTC 59.823 55.000 0.00 0.00 0.00 4.79
5051 5121 0.615331 AAGCATGAGGTGTGATCGGT 59.385 50.000 0.00 0.00 0.00 4.69
5052 5122 1.012086 CAAGCATGAGGTGTGATCGG 58.988 55.000 0.00 0.00 0.00 4.18
5053 5123 2.014335 TCAAGCATGAGGTGTGATCG 57.986 50.000 0.00 0.00 0.00 3.69
5054 5124 2.033049 GCATCAAGCATGAGGTGTGATC 59.967 50.000 5.43 0.00 44.79 2.92
5055 5125 2.022195 GCATCAAGCATGAGGTGTGAT 58.978 47.619 5.43 0.00 44.79 3.06
5056 5126 1.456296 GCATCAAGCATGAGGTGTGA 58.544 50.000 5.43 0.00 44.79 3.58
5073 5143 4.882842 TTAGGTATTCGGATGCATAGCA 57.117 40.909 0.00 0.00 44.86 3.49
5074 5144 8.438676 AAATATTAGGTATTCGGATGCATAGC 57.561 34.615 0.00 0.00 31.79 2.97
5075 5145 9.599866 TGAAATATTAGGTATTCGGATGCATAG 57.400 33.333 0.00 0.00 31.79 2.23
5077 5147 9.113838 GATGAAATATTAGGTATTCGGATGCAT 57.886 33.333 0.00 0.00 31.79 3.96
5078 5148 7.552687 GGATGAAATATTAGGTATTCGGATGCA 59.447 37.037 0.00 0.00 31.79 3.96
5079 5149 7.770897 AGGATGAAATATTAGGTATTCGGATGC 59.229 37.037 0.00 0.00 31.79 3.91
5080 5150 9.672673 AAGGATGAAATATTAGGTATTCGGATG 57.327 33.333 0.00 0.00 31.79 3.51
5096 5166 9.442047 GATTCGTATGGATCTAAAGGATGAAAT 57.558 33.333 0.00 0.00 34.33 2.17
5097 5167 8.428852 TGATTCGTATGGATCTAAAGGATGAAA 58.571 33.333 4.82 0.00 34.33 2.69
5098 5168 7.962441 TGATTCGTATGGATCTAAAGGATGAA 58.038 34.615 4.82 0.00 34.33 2.57
5099 5169 7.539034 TGATTCGTATGGATCTAAAGGATGA 57.461 36.000 4.82 0.00 34.33 2.92
5100 5170 9.875691 TTATGATTCGTATGGATCTAAAGGATG 57.124 33.333 4.82 0.00 34.33 3.51
5102 5172 9.929180 CTTTATGATTCGTATGGATCTAAAGGA 57.071 33.333 17.35 0.00 0.00 3.36
5103 5173 9.155975 CCTTTATGATTCGTATGGATCTAAAGG 57.844 37.037 23.18 23.18 37.43 3.11
5104 5174 9.929180 TCCTTTATGATTCGTATGGATCTAAAG 57.071 33.333 17.76 17.76 0.00 1.85
5106 5176 9.929180 CTTCCTTTATGATTCGTATGGATCTAA 57.071 33.333 4.82 0.00 0.00 2.10
5107 5177 9.090103 ACTTCCTTTATGATTCGTATGGATCTA 57.910 33.333 4.82 0.00 0.00 1.98
5108 5178 7.967908 ACTTCCTTTATGATTCGTATGGATCT 58.032 34.615 4.82 0.00 0.00 2.75
5109 5179 8.608844 AACTTCCTTTATGATTCGTATGGATC 57.391 34.615 0.00 0.00 0.00 3.36
5110 5180 7.661847 GGAACTTCCTTTATGATTCGTATGGAT 59.338 37.037 0.00 0.00 32.53 3.41
5111 5181 6.990349 GGAACTTCCTTTATGATTCGTATGGA 59.010 38.462 0.00 4.83 32.53 3.41
5112 5182 6.992715 AGGAACTTCCTTTATGATTCGTATGG 59.007 38.462 4.29 0.00 46.91 2.74
5113 5183 9.712305 ATAGGAACTTCCTTTATGATTCGTATG 57.288 33.333 15.78 0.00 46.91 2.39
5114 5184 9.712305 CATAGGAACTTCCTTTATGATTCGTAT 57.288 33.333 15.78 0.00 46.91 3.06
5115 5185 8.701895 ACATAGGAACTTCCTTTATGATTCGTA 58.298 33.333 20.73 0.66 46.91 3.43
5116 5186 7.565680 ACATAGGAACTTCCTTTATGATTCGT 58.434 34.615 20.73 4.31 46.91 3.85
5117 5187 8.979574 GTACATAGGAACTTCCTTTATGATTCG 58.020 37.037 20.73 3.82 46.91 3.34
5121 5191 9.483489 TGTAGTACATAGGAACTTCCTTTATGA 57.517 33.333 20.73 4.17 46.91 2.15
5125 5195 9.263446 TGTATGTAGTACATAGGAACTTCCTTT 57.737 33.333 20.90 5.30 41.03 3.11
5126 5196 8.834004 TGTATGTAGTACATAGGAACTTCCTT 57.166 34.615 20.90 0.79 41.03 3.36
5139 5209 5.833667 AGGCTAGCTTGATGTATGTAGTACA 59.166 40.000 15.72 5.24 46.73 2.90
5140 5210 6.334102 AGGCTAGCTTGATGTATGTAGTAC 57.666 41.667 15.72 0.00 0.00 2.73
5141 5211 8.358148 GTTTAGGCTAGCTTGATGTATGTAGTA 58.642 37.037 15.72 0.00 0.00 1.82
5142 5212 6.978674 TTAGGCTAGCTTGATGTATGTAGT 57.021 37.500 15.72 0.00 0.00 2.73
5143 5213 7.437748 AGTTTAGGCTAGCTTGATGTATGTAG 58.562 38.462 15.72 0.00 0.00 2.74
5144 5214 7.361457 AGTTTAGGCTAGCTTGATGTATGTA 57.639 36.000 15.72 0.00 0.00 2.29
5145 5215 6.240549 AGTTTAGGCTAGCTTGATGTATGT 57.759 37.500 15.72 0.00 0.00 2.29
5146 5216 8.552034 GTTTAGTTTAGGCTAGCTTGATGTATG 58.448 37.037 15.72 0.00 0.00 2.39
5147 5217 8.487028 AGTTTAGTTTAGGCTAGCTTGATGTAT 58.513 33.333 15.72 0.00 0.00 2.29
5148 5218 7.848128 AGTTTAGTTTAGGCTAGCTTGATGTA 58.152 34.615 15.72 0.00 0.00 2.29
5149 5219 6.712276 AGTTTAGTTTAGGCTAGCTTGATGT 58.288 36.000 15.72 0.00 0.00 3.06
5150 5220 7.464710 CGAAGTTTAGTTTAGGCTAGCTTGATG 60.465 40.741 15.72 0.00 0.00 3.07
5151 5221 6.535508 CGAAGTTTAGTTTAGGCTAGCTTGAT 59.464 38.462 15.72 1.13 0.00 2.57
5152 5222 5.867716 CGAAGTTTAGTTTAGGCTAGCTTGA 59.132 40.000 15.72 0.00 0.00 3.02
5153 5223 5.638234 ACGAAGTTTAGTTTAGGCTAGCTTG 59.362 40.000 15.72 0.00 37.78 4.01
5154 5224 5.638234 CACGAAGTTTAGTTTAGGCTAGCTT 59.362 40.000 15.72 10.11 41.61 3.74
5155 5225 5.169295 CACGAAGTTTAGTTTAGGCTAGCT 58.831 41.667 15.72 3.22 41.61 3.32
5156 5226 4.329256 CCACGAAGTTTAGTTTAGGCTAGC 59.671 45.833 6.04 6.04 41.61 3.42
5157 5227 5.476614 ACCACGAAGTTTAGTTTAGGCTAG 58.523 41.667 0.00 0.00 41.61 3.42
5158 5228 5.473039 GACCACGAAGTTTAGTTTAGGCTA 58.527 41.667 0.00 0.00 41.61 3.93
5159 5229 4.313282 GACCACGAAGTTTAGTTTAGGCT 58.687 43.478 0.00 0.00 41.61 4.58
5160 5230 3.122445 CGACCACGAAGTTTAGTTTAGGC 59.878 47.826 0.00 0.00 41.61 3.93
5161 5231 3.676646 CCGACCACGAAGTTTAGTTTAGG 59.323 47.826 0.00 0.00 41.61 2.69
5162 5232 4.549458 TCCGACCACGAAGTTTAGTTTAG 58.451 43.478 0.00 0.00 41.61 1.85
5163 5233 4.278170 TCTCCGACCACGAAGTTTAGTTTA 59.722 41.667 0.00 0.00 41.61 2.01
5164 5234 3.068590 TCTCCGACCACGAAGTTTAGTTT 59.931 43.478 0.00 0.00 41.61 2.66
5165 5235 2.624838 TCTCCGACCACGAAGTTTAGTT 59.375 45.455 0.00 0.00 41.61 2.24
5166 5236 2.233271 TCTCCGACCACGAAGTTTAGT 58.767 47.619 0.00 0.00 41.61 2.24
5167 5237 3.179830 CATCTCCGACCACGAAGTTTAG 58.820 50.000 0.00 0.00 41.61 1.85
5168 5238 2.559668 ACATCTCCGACCACGAAGTTTA 59.440 45.455 0.00 0.00 41.61 2.01
5169 5239 1.343465 ACATCTCCGACCACGAAGTTT 59.657 47.619 0.00 0.00 41.61 2.66
5170 5240 0.966920 ACATCTCCGACCACGAAGTT 59.033 50.000 0.00 0.00 41.61 2.66
5172 5242 1.078759 GCACATCTCCGACCACGAAG 61.079 60.000 0.00 0.00 42.66 3.79
5173 5243 1.080093 GCACATCTCCGACCACGAA 60.080 57.895 0.00 0.00 42.66 3.85
5174 5244 2.272447 TGCACATCTCCGACCACGA 61.272 57.895 0.00 0.00 42.66 4.35
5175 5245 2.094659 GTGCACATCTCCGACCACG 61.095 63.158 13.17 0.00 39.43 4.94
5176 5246 0.530744 TAGTGCACATCTCCGACCAC 59.469 55.000 21.04 0.00 0.00 4.16
5177 5247 0.530744 GTAGTGCACATCTCCGACCA 59.469 55.000 21.04 0.00 0.00 4.02
5178 5248 0.530744 TGTAGTGCACATCTCCGACC 59.469 55.000 21.04 0.00 30.04 4.79
5179 5249 2.586258 ATGTAGTGCACATCTCCGAC 57.414 50.000 21.04 5.55 44.99 4.79
5203 5273 4.029809 AACTACCCAGCACCCGGC 62.030 66.667 0.00 0.00 45.30 6.13
5204 5274 2.046314 CAACTACCCAGCACCCGG 60.046 66.667 0.00 0.00 0.00 5.73
5205 5275 2.046314 CCAACTACCCAGCACCCG 60.046 66.667 0.00 0.00 0.00 5.28
5206 5276 1.002502 GTCCAACTACCCAGCACCC 60.003 63.158 0.00 0.00 0.00 4.61
5207 5277 1.375523 CGTCCAACTACCCAGCACC 60.376 63.158 0.00 0.00 0.00 5.01
5208 5278 2.033194 GCGTCCAACTACCCAGCAC 61.033 63.158 0.00 0.00 0.00 4.40
5209 5279 2.345991 GCGTCCAACTACCCAGCA 59.654 61.111 0.00 0.00 0.00 4.41
5210 5280 2.813908 CGCGTCCAACTACCCAGC 60.814 66.667 0.00 0.00 0.00 4.85
5211 5281 1.445582 GACGCGTCCAACTACCCAG 60.446 63.158 28.61 0.00 0.00 4.45
5212 5282 2.652530 GACGCGTCCAACTACCCA 59.347 61.111 28.61 0.00 0.00 4.51
5213 5283 2.505557 CGACGCGTCCAACTACCC 60.506 66.667 31.84 6.18 0.00 3.69
5214 5284 3.177249 GCGACGCGTCCAACTACC 61.177 66.667 31.84 6.96 0.00 3.18
5215 5285 2.429571 TGCGACGCGTCCAACTAC 60.430 61.111 31.84 15.26 0.00 2.73
5216 5286 2.126618 CTGCGACGCGTCCAACTA 60.127 61.111 31.84 13.43 0.00 2.24
5230 5300 4.847444 GAGGAGCCGAAGCCCTGC 62.847 72.222 0.00 0.00 39.09 4.85
5231 5301 4.168291 GGAGGAGCCGAAGCCCTG 62.168 72.222 0.00 0.00 39.09 4.45
5232 5302 4.406763 AGGAGGAGCCGAAGCCCT 62.407 66.667 0.00 0.00 43.43 5.19
5233 5303 3.855853 GAGGAGGAGCCGAAGCCC 61.856 72.222 0.00 0.00 43.43 5.19
5234 5304 3.855853 GGAGGAGGAGCCGAAGCC 61.856 72.222 0.00 0.00 43.43 4.35
5235 5305 2.762043 AGGAGGAGGAGCCGAAGC 60.762 66.667 0.00 0.00 43.43 3.86
5236 5306 0.758685 ATGAGGAGGAGGAGCCGAAG 60.759 60.000 0.00 0.00 43.43 3.79
5237 5307 0.757188 GATGAGGAGGAGGAGCCGAA 60.757 60.000 0.00 0.00 43.43 4.30
5238 5308 1.152652 GATGAGGAGGAGGAGCCGA 60.153 63.158 0.00 0.00 43.43 5.54
5239 5309 2.206536 GGATGAGGAGGAGGAGCCG 61.207 68.421 0.00 0.00 43.43 5.52
5240 5310 0.473501 ATGGATGAGGAGGAGGAGCC 60.474 60.000 0.00 0.00 0.00 4.70
5241 5311 2.317371 TATGGATGAGGAGGAGGAGC 57.683 55.000 0.00 0.00 0.00 4.70
5242 5312 3.951037 CGTATATGGATGAGGAGGAGGAG 59.049 52.174 0.00 0.00 0.00 3.69
5243 5313 3.878131 GCGTATATGGATGAGGAGGAGGA 60.878 52.174 0.00 0.00 0.00 3.71
5244 5314 2.428890 GCGTATATGGATGAGGAGGAGG 59.571 54.545 0.00 0.00 0.00 4.30
5245 5315 3.092301 TGCGTATATGGATGAGGAGGAG 58.908 50.000 0.00 0.00 0.00 3.69
5246 5316 3.169512 TGCGTATATGGATGAGGAGGA 57.830 47.619 0.00 0.00 0.00 3.71
5247 5317 3.854666 CTTGCGTATATGGATGAGGAGG 58.145 50.000 0.00 0.00 0.00 4.30
5248 5318 3.257393 GCTTGCGTATATGGATGAGGAG 58.743 50.000 3.86 0.00 0.00 3.69
5249 5319 2.352715 CGCTTGCGTATATGGATGAGGA 60.353 50.000 6.86 0.00 0.00 3.71
5250 5320 1.995484 CGCTTGCGTATATGGATGAGG 59.005 52.381 6.86 0.00 0.00 3.86
5251 5321 2.663602 GACGCTTGCGTATATGGATGAG 59.336 50.000 20.67 3.15 0.00 2.90
5252 5322 2.296190 AGACGCTTGCGTATATGGATGA 59.704 45.455 20.67 0.00 0.00 2.92
5253 5323 2.663602 GAGACGCTTGCGTATATGGATG 59.336 50.000 20.67 0.00 0.00 3.51
5254 5324 2.668556 CGAGACGCTTGCGTATATGGAT 60.669 50.000 20.67 1.61 0.00 3.41
5255 5325 1.334689 CGAGACGCTTGCGTATATGGA 60.335 52.381 20.67 0.00 0.00 3.41
5256 5326 1.053048 CGAGACGCTTGCGTATATGG 58.947 55.000 20.67 7.04 0.00 2.74
5257 5327 1.709203 GACGAGACGCTTGCGTATATG 59.291 52.381 20.67 15.11 38.51 1.78
5258 5328 1.659491 CGACGAGACGCTTGCGTATAT 60.659 52.381 20.67 9.45 38.51 0.86
5259 5329 0.315625 CGACGAGACGCTTGCGTATA 60.316 55.000 20.67 0.00 38.51 1.47
5260 5330 1.582937 CGACGAGACGCTTGCGTAT 60.583 57.895 20.67 17.88 38.51 3.06
5261 5331 1.974249 ATCGACGAGACGCTTGCGTA 61.974 55.000 20.67 3.82 38.51 4.42
5262 5332 3.324099 ATCGACGAGACGCTTGCGT 62.324 57.895 20.76 20.76 41.45 5.24
5263 5333 2.577112 ATCGACGAGACGCTTGCG 60.577 61.111 13.70 13.70 0.00 4.85
5264 5334 2.990735 CATCGACGAGACGCTTGC 59.009 61.111 3.01 0.00 0.00 4.01
5265 5335 2.508891 GGCATCGACGAGACGCTTG 61.509 63.158 14.07 3.59 38.28 4.01
5266 5336 1.374343 TAGGCATCGACGAGACGCTT 61.374 55.000 14.07 10.38 38.28 4.68
5267 5337 1.818363 TAGGCATCGACGAGACGCT 60.818 57.895 14.07 6.45 38.28 5.07
5268 5338 1.654743 GTAGGCATCGACGAGACGC 60.655 63.158 3.01 5.93 37.33 5.19
5269 5339 1.367782 CGTAGGCATCGACGAGACG 60.368 63.158 3.01 4.37 43.10 4.18
5270 5340 1.009900 CCGTAGGCATCGACGAGAC 60.010 63.158 3.01 0.00 46.14 3.36
5271 5341 3.417601 CCGTAGGCATCGACGAGA 58.582 61.111 3.01 0.00 46.14 4.04
5288 5358 2.047179 GGTGGAGGTGGAGAACGC 60.047 66.667 0.00 0.00 0.00 4.84
5289 5359 1.592223 GAGGTGGAGGTGGAGAACG 59.408 63.158 0.00 0.00 0.00 3.95
5290 5360 0.545548 AGGAGGTGGAGGTGGAGAAC 60.546 60.000 0.00 0.00 0.00 3.01
5291 5361 0.545309 CAGGAGGTGGAGGTGGAGAA 60.545 60.000 0.00 0.00 0.00 2.87
5292 5362 1.079256 CAGGAGGTGGAGGTGGAGA 59.921 63.158 0.00 0.00 0.00 3.71
5293 5363 2.664081 GCAGGAGGTGGAGGTGGAG 61.664 68.421 0.00 0.00 0.00 3.86
5294 5364 2.607750 GCAGGAGGTGGAGGTGGA 60.608 66.667 0.00 0.00 0.00 4.02
5295 5365 2.067932 TTTGCAGGAGGTGGAGGTGG 62.068 60.000 0.00 0.00 0.00 4.61
5296 5366 0.038744 ATTTGCAGGAGGTGGAGGTG 59.961 55.000 0.00 0.00 0.00 4.00
5297 5367 0.038744 CATTTGCAGGAGGTGGAGGT 59.961 55.000 0.00 0.00 0.00 3.85
5298 5368 0.329261 TCATTTGCAGGAGGTGGAGG 59.671 55.000 0.00 0.00 0.00 4.30
5299 5369 1.271543 TGTCATTTGCAGGAGGTGGAG 60.272 52.381 0.00 0.00 0.00 3.86
5300 5370 0.770499 TGTCATTTGCAGGAGGTGGA 59.230 50.000 0.00 0.00 0.00 4.02
5301 5371 1.171308 CTGTCATTTGCAGGAGGTGG 58.829 55.000 0.00 0.00 0.00 4.61
5302 5372 1.538512 CACTGTCATTTGCAGGAGGTG 59.461 52.381 0.00 0.00 38.22 4.00
5303 5373 1.143684 ACACTGTCATTTGCAGGAGGT 59.856 47.619 0.00 0.00 38.22 3.85
5304 5374 1.901591 ACACTGTCATTTGCAGGAGG 58.098 50.000 0.00 0.00 38.22 4.30
5305 5375 3.551454 CCAAACACTGTCATTTGCAGGAG 60.551 47.826 8.04 0.00 38.22 3.69
5306 5376 2.361757 CCAAACACTGTCATTTGCAGGA 59.638 45.455 8.04 0.00 38.22 3.86
5307 5377 2.746269 CCAAACACTGTCATTTGCAGG 58.254 47.619 8.04 0.00 38.22 4.85
5308 5378 2.129607 GCCAAACACTGTCATTTGCAG 58.870 47.619 8.04 0.00 39.67 4.41
5309 5379 1.202510 GGCCAAACACTGTCATTTGCA 60.203 47.619 0.00 0.00 34.99 4.08
5310 5380 1.069049 AGGCCAAACACTGTCATTTGC 59.931 47.619 5.01 0.75 34.99 3.68
5311 5381 2.288395 GGAGGCCAAACACTGTCATTTG 60.288 50.000 5.01 6.95 35.89 2.32
5312 5382 1.963515 GGAGGCCAAACACTGTCATTT 59.036 47.619 5.01 0.00 0.00 2.32
5313 5383 1.620822 GGAGGCCAAACACTGTCATT 58.379 50.000 5.01 0.00 0.00 2.57
5314 5384 0.606401 CGGAGGCCAAACACTGTCAT 60.606 55.000 5.01 0.00 0.00 3.06
5315 5385 1.227823 CGGAGGCCAAACACTGTCA 60.228 57.895 5.01 0.00 0.00 3.58
5316 5386 1.070786 TCGGAGGCCAAACACTGTC 59.929 57.895 5.01 0.00 0.00 3.51
5317 5387 1.227853 GTCGGAGGCCAAACACTGT 60.228 57.895 5.01 0.00 0.00 3.55
5318 5388 2.317609 CGTCGGAGGCCAAACACTG 61.318 63.158 5.01 0.00 0.00 3.66
5319 5389 2.030562 CGTCGGAGGCCAAACACT 59.969 61.111 5.01 0.00 0.00 3.55
5320 5390 3.723348 GCGTCGGAGGCCAAACAC 61.723 66.667 5.01 0.00 0.00 3.32
5327 5397 4.208686 AGAATCGGCGTCGGAGGC 62.209 66.667 10.62 13.96 36.95 4.70
5328 5398 2.076622 ATCAGAATCGGCGTCGGAGG 62.077 60.000 10.62 0.00 36.95 4.30
5329 5399 0.661780 GATCAGAATCGGCGTCGGAG 60.662 60.000 10.62 0.00 36.95 4.63
5330 5400 1.359117 GATCAGAATCGGCGTCGGA 59.641 57.895 10.62 4.66 36.95 4.55
5331 5401 3.923614 GATCAGAATCGGCGTCGG 58.076 61.111 10.62 0.00 36.95 4.79
5339 5409 2.558795 TCGATTCCCTCCGATCAGAATC 59.441 50.000 0.00 0.00 40.67 2.52
5340 5410 2.560542 CTCGATTCCCTCCGATCAGAAT 59.439 50.000 0.00 0.00 34.08 2.40
5341 5411 1.957177 CTCGATTCCCTCCGATCAGAA 59.043 52.381 0.00 0.00 34.08 3.02
5342 5412 1.133761 ACTCGATTCCCTCCGATCAGA 60.134 52.381 0.00 0.00 34.08 3.27
5343 5413 1.323412 ACTCGATTCCCTCCGATCAG 58.677 55.000 0.00 0.00 34.08 2.90
5344 5414 2.651382 TACTCGATTCCCTCCGATCA 57.349 50.000 0.00 0.00 34.08 2.92
5345 5415 2.096174 CGATACTCGATTCCCTCCGATC 59.904 54.545 0.00 0.00 43.74 3.69
5346 5416 2.085320 CGATACTCGATTCCCTCCGAT 58.915 52.381 0.00 0.00 43.74 4.18
5347 5417 1.520494 CGATACTCGATTCCCTCCGA 58.480 55.000 0.00 0.00 43.74 4.55
5348 5418 0.109689 GCGATACTCGATTCCCTCCG 60.110 60.000 0.00 0.00 43.74 4.63
5349 5419 0.244178 GGCGATACTCGATTCCCTCC 59.756 60.000 0.00 0.00 43.74 4.30
5350 5420 1.068194 CAGGCGATACTCGATTCCCTC 60.068 57.143 0.00 0.00 43.74 4.30
5351 5421 0.962489 CAGGCGATACTCGATTCCCT 59.038 55.000 0.00 0.00 43.74 4.20
5352 5422 0.667792 GCAGGCGATACTCGATTCCC 60.668 60.000 0.00 0.00 43.74 3.97
5353 5423 0.315568 AGCAGGCGATACTCGATTCC 59.684 55.000 0.00 0.00 43.74 3.01
5354 5424 1.413382 CAGCAGGCGATACTCGATTC 58.587 55.000 0.00 0.00 43.74 2.52
5355 5425 0.598680 GCAGCAGGCGATACTCGATT 60.599 55.000 0.00 0.00 43.74 3.34
5356 5426 1.006805 GCAGCAGGCGATACTCGAT 60.007 57.895 0.00 0.00 43.74 3.59
5357 5427 2.413351 GCAGCAGGCGATACTCGA 59.587 61.111 0.00 0.00 43.74 4.04
5374 5444 3.344215 GCGGATCTGCATGCGGAG 61.344 66.667 31.39 20.22 43.67 4.63
5628 5698 0.035458 GGATGCGGTGGATCTTAGGG 59.965 60.000 0.00 0.00 0.00 3.53
5629 5699 0.319900 CGGATGCGGTGGATCTTAGG 60.320 60.000 0.00 0.00 0.00 2.69
5630 5700 0.319900 CCGGATGCGGTGGATCTTAG 60.320 60.000 18.74 0.00 0.00 2.18
5631 5701 0.757561 TCCGGATGCGGTGGATCTTA 60.758 55.000 25.75 0.00 0.00 2.10
5632 5702 2.032860 CTCCGGATGCGGTGGATCTT 62.033 60.000 25.75 0.00 0.00 2.40
5633 5703 2.443952 TCCGGATGCGGTGGATCT 60.444 61.111 25.75 0.00 0.00 2.75
5634 5704 2.029666 CTCCGGATGCGGTGGATC 59.970 66.667 25.75 0.00 0.00 3.36
5635 5705 2.939760 TACCTCCGGATGCGGTGGAT 62.940 60.000 41.56 29.64 43.25 3.41
5636 5706 3.665515 TACCTCCGGATGCGGTGGA 62.666 63.158 41.56 26.63 43.25 4.02
5637 5707 3.151710 TACCTCCGGATGCGGTGG 61.152 66.667 35.94 35.94 45.29 4.61
5638 5708 2.417516 CTACCTCCGGATGCGGTG 59.582 66.667 25.75 22.41 32.36 4.94
5639 5709 3.537874 GCTACCTCCGGATGCGGT 61.538 66.667 25.75 17.23 34.86 5.68
5640 5710 4.301027 GGCTACCTCCGGATGCGG 62.301 72.222 21.08 21.08 0.00 5.69
5641 5711 4.301027 GGGCTACCTCCGGATGCG 62.301 72.222 3.57 0.00 0.00 4.73
5642 5712 3.942439 GGGGCTACCTCCGGATGC 61.942 72.222 3.57 7.49 36.80 3.91
5643 5713 3.616721 CGGGGCTACCTCCGGATG 61.617 72.222 3.57 4.42 42.32 3.51
5651 5721 4.971125 GATCGCTGCGGGGCTACC 62.971 72.222 23.03 0.28 0.00 3.18
5652 5722 4.971125 GGATCGCTGCGGGGCTAC 62.971 72.222 23.03 7.25 0.00 3.58
5658 5728 4.880537 AAGCTCGGATCGCTGCGG 62.881 66.667 23.03 5.91 37.87 5.69
5659 5729 3.326210 GAAGCTCGGATCGCTGCG 61.326 66.667 17.25 17.25 37.87 5.18
5660 5730 3.326210 CGAAGCTCGGATCGCTGC 61.326 66.667 0.00 0.00 37.87 5.25
5673 5743 2.002586 AGATCCGTGAAATGTGCGAAG 58.997 47.619 0.00 0.00 0.00 3.79
5674 5744 1.731709 CAGATCCGTGAAATGTGCGAA 59.268 47.619 0.00 0.00 0.00 4.70
5675 5745 1.358877 CAGATCCGTGAAATGTGCGA 58.641 50.000 0.00 0.00 0.00 5.10
5676 5746 0.247814 GCAGATCCGTGAAATGTGCG 60.248 55.000 0.00 0.00 34.30 5.34
5677 5747 1.063174 GAGCAGATCCGTGAAATGTGC 59.937 52.381 0.00 0.00 42.13 4.57
5678 5748 2.349590 TGAGCAGATCCGTGAAATGTG 58.650 47.619 0.00 0.00 0.00 3.21
5679 5749 2.768253 TGAGCAGATCCGTGAAATGT 57.232 45.000 0.00 0.00 0.00 2.71
5680 5750 2.353889 CCTTGAGCAGATCCGTGAAATG 59.646 50.000 0.00 0.00 0.00 2.32
5681 5751 2.237143 TCCTTGAGCAGATCCGTGAAAT 59.763 45.455 0.00 0.00 0.00 2.17
5682 5752 1.623311 TCCTTGAGCAGATCCGTGAAA 59.377 47.619 0.00 0.00 0.00 2.69
5683 5753 1.205655 CTCCTTGAGCAGATCCGTGAA 59.794 52.381 0.00 0.00 0.00 3.18
5684 5754 0.820226 CTCCTTGAGCAGATCCGTGA 59.180 55.000 0.00 0.00 0.00 4.35
5685 5755 3.359194 CTCCTTGAGCAGATCCGTG 57.641 57.895 0.00 0.00 0.00 4.94
5695 5765 2.438075 GGGCTGCAGCTCCTTGAG 60.438 66.667 35.82 0.00 41.70 3.02
5696 5766 4.399395 CGGGCTGCAGCTCCTTGA 62.399 66.667 35.82 0.00 38.61 3.02
5697 5767 4.711949 ACGGGCTGCAGCTCCTTG 62.712 66.667 35.82 22.94 38.61 3.61
5698 5768 4.711949 CACGGGCTGCAGCTCCTT 62.712 66.667 35.82 25.06 38.61 3.36
5712 5782 0.660595 CTATCTAACGCCGGAGCACG 60.661 60.000 5.05 0.27 39.83 5.34
5713 5783 0.318784 CCTATCTAACGCCGGAGCAC 60.319 60.000 5.05 0.00 39.83 4.40
5714 5784 1.461091 CCCTATCTAACGCCGGAGCA 61.461 60.000 5.05 0.00 39.83 4.26
5715 5785 1.289380 CCCTATCTAACGCCGGAGC 59.711 63.158 5.05 0.00 0.00 4.70
5716 5786 1.811359 CTACCCTATCTAACGCCGGAG 59.189 57.143 5.05 3.72 0.00 4.63
5717 5787 1.143684 ACTACCCTATCTAACGCCGGA 59.856 52.381 5.05 0.00 0.00 5.14
5718 5788 1.613836 ACTACCCTATCTAACGCCGG 58.386 55.000 0.00 0.00 0.00 6.13
5719 5789 2.030451 GGAACTACCCTATCTAACGCCG 60.030 54.545 0.00 0.00 0.00 6.46
5720 5790 3.229293 AGGAACTACCCTATCTAACGCC 58.771 50.000 0.00 0.00 36.02 5.68
5721 5791 4.933505 AAGGAACTACCCTATCTAACGC 57.066 45.455 0.00 0.00 38.49 4.84
5722 5792 5.242615 GGGTAAGGAACTACCCTATCTAACG 59.757 48.000 10.96 0.00 43.86 3.18
5723 5793 5.242615 CGGGTAAGGAACTACCCTATCTAAC 59.757 48.000 15.18 0.00 44.53 2.34
5724 5794 5.134339 TCGGGTAAGGAACTACCCTATCTAA 59.866 44.000 15.18 0.00 44.53 2.10
5725 5795 4.665009 TCGGGTAAGGAACTACCCTATCTA 59.335 45.833 15.18 0.00 44.53 1.98
5726 5796 3.464833 TCGGGTAAGGAACTACCCTATCT 59.535 47.826 15.18 0.00 44.53 1.98
5727 5797 3.571828 GTCGGGTAAGGAACTACCCTATC 59.428 52.174 15.18 3.99 44.53 2.08
5728 5798 3.570540 GTCGGGTAAGGAACTACCCTAT 58.429 50.000 15.18 0.00 44.53 2.57
5729 5799 2.683742 CGTCGGGTAAGGAACTACCCTA 60.684 54.545 15.18 3.50 44.53 3.53
5730 5800 1.857965 GTCGGGTAAGGAACTACCCT 58.142 55.000 15.18 0.00 44.53 4.34
5731 5801 0.457443 CGTCGGGTAAGGAACTACCC 59.543 60.000 8.54 8.54 43.82 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.