Multiple sequence alignment - TraesCS1A01G253800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G253800 chr1A 100.000 3248 0 0 1 3248 445536315 445533068 0.000000e+00 5999
1 TraesCS1A01G253800 chr1A 87.665 1362 111 20 403 1750 445543626 445542308 0.000000e+00 1531
2 TraesCS1A01G253800 chr1A 79.112 1216 194 43 556 1750 445655666 445654490 0.000000e+00 784
3 TraesCS1A01G253800 chr1A 88.046 527 55 6 1748 2270 445654455 445653933 4.600000e-173 617
4 TraesCS1A01G253800 chr1A 87.335 529 58 7 1750 2272 445542271 445541746 6.000000e-167 597
5 TraesCS1A01G253800 chr1A 83.931 641 76 16 1763 2381 445547485 445546850 3.610000e-164 588
6 TraesCS1A01G253800 chr1A 87.032 401 51 1 1348 1748 445547934 445547535 4.940000e-123 451
7 TraesCS1A01G253800 chr1A 85.294 340 43 3 947 1283 445548464 445548129 8.630000e-91 344
8 TraesCS1A01G253800 chr1A 81.931 321 58 0 6 326 99180976 99181296 4.130000e-69 272
9 TraesCS1A01G253800 chr1D 86.867 1363 130 17 406 1748 345432960 345431627 0.000000e+00 1480
10 TraesCS1A01G253800 chr1D 94.048 924 40 9 1748 2664 345416239 345415324 0.000000e+00 1387
11 TraesCS1A01G253800 chr1D 96.459 593 18 3 1159 1750 345416864 345416274 0.000000e+00 976
12 TraesCS1A01G253800 chr1D 90.625 736 63 6 367 1098 345425438 345424705 0.000000e+00 972
13 TraesCS1A01G253800 chr1D 87.335 529 59 7 1748 2272 345431591 345431067 1.670000e-167 599
14 TraesCS1A01G253800 chr1D 87.146 529 59 7 1748 2270 345479881 345479356 2.790000e-165 592
15 TraesCS1A01G253800 chr1D 84.880 582 67 11 1814 2379 345435809 345435233 4.700000e-158 568
16 TraesCS1A01G253800 chr1D 88.542 384 43 1 1367 1750 345480298 345479916 6.350000e-127 464
17 TraesCS1A01G253800 chr1D 76.203 748 127 37 534 1268 345481066 345480357 6.670000e-92 348
18 TraesCS1A01G253800 chr1D 94.040 151 8 1 2668 2818 345415289 345415140 9.070000e-56 228
19 TraesCS1A01G253800 chr1B 88.298 1034 85 22 733 1750 465244641 465245654 0.000000e+00 1206
20 TraesCS1A01G253800 chr1B 88.445 701 75 5 367 1063 465269339 465270037 0.000000e+00 841
21 TraesCS1A01G253800 chr1B 83.991 887 122 11 873 1748 465240522 465241399 0.000000e+00 833
22 TraesCS1A01G253800 chr1B 99.076 433 3 1 2817 3248 681100707 681101139 0.000000e+00 776
23 TraesCS1A01G253800 chr1B 98.614 433 5 1 2817 3248 649327671 649327239 0.000000e+00 765
24 TraesCS1A01G253800 chr1B 78.808 1208 192 43 556 1744 465097731 465098893 0.000000e+00 754
25 TraesCS1A01G253800 chr1B 87.287 527 58 6 1750 2270 465098936 465099459 7.760000e-166 593
26 TraesCS1A01G253800 chr1B 85.592 583 65 11 1814 2381 465241513 465242091 7.760000e-166 593
27 TraesCS1A01G253800 chr1B 93.300 403 20 2 1355 1750 465362622 465363024 3.610000e-164 588
28 TraesCS1A01G253800 chr1B 91.008 367 18 5 2303 2666 465364549 465364903 6.300000e-132 481
29 TraesCS1A01G253800 chr1B 92.989 271 19 0 1059 1329 465270357 465270627 2.350000e-106 396
30 TraesCS1A01G253800 chr1B 93.919 148 8 1 2668 2815 465364936 465365082 4.220000e-54 222
31 TraesCS1A01G253800 chr6A 99.076 433 3 1 2817 3248 573434299 573433867 0.000000e+00 776
32 TraesCS1A01G253800 chr4A 97.978 445 8 1 2805 3248 220054279 220053835 0.000000e+00 771
33 TraesCS1A01G253800 chr3A 98.845 433 4 1 2817 3248 691646039 691645607 0.000000e+00 771
34 TraesCS1A01G253800 chr7B 98.614 433 5 1 2817 3248 15796302 15795870 0.000000e+00 765
35 TraesCS1A01G253800 chr5B 98.614 433 5 1 2817 3248 230433236 230432804 0.000000e+00 765
36 TraesCS1A01G253800 chr4B 98.614 433 5 1 2817 3248 371020481 371020049 0.000000e+00 765
37 TraesCS1A01G253800 chr4B 98.614 433 4 2 2817 3248 624644805 624644374 0.000000e+00 765
38 TraesCS1A01G253800 chr4B 81.651 327 56 3 4 326 182671132 182671458 5.340000e-68 268
39 TraesCS1A01G253800 chr2D 89.646 367 38 0 1 367 558772554 558772920 4.910000e-128 468
40 TraesCS1A01G253800 chr2D 80.163 368 66 6 1 367 594588128 594587767 5.340000e-68 268
41 TraesCS1A01G253800 chr3D 84.239 368 53 3 1 367 290213279 290212916 1.430000e-93 353
42 TraesCS1A01G253800 chr7A 81.944 360 63 2 4 362 287546459 287546101 1.460000e-78 303
43 TraesCS1A01G253800 chr5D 80.548 365 65 5 1 362 100113883 100114244 3.190000e-70 276
44 TraesCS1A01G253800 chr4D 80.601 366 63 7 1 362 2852918 2853279 3.190000e-70 276
45 TraesCS1A01G253800 chr6B 81.734 323 55 4 6 326 51956896 51956576 1.920000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G253800 chr1A 445533068 445536315 3247 True 5999.000000 5999 100.000000 1 3248 1 chr1A.!!$R1 3247
1 TraesCS1A01G253800 chr1A 445541746 445548464 6718 True 702.200000 1531 86.251400 403 2381 5 chr1A.!!$R2 1978
2 TraesCS1A01G253800 chr1A 445653933 445655666 1733 True 700.500000 784 83.579000 556 2270 2 chr1A.!!$R3 1714
3 TraesCS1A01G253800 chr1D 345424705 345425438 733 True 972.000000 972 90.625000 367 1098 1 chr1D.!!$R1 731
4 TraesCS1A01G253800 chr1D 345431067 345435809 4742 True 882.333333 1480 86.360667 406 2379 3 chr1D.!!$R3 1973
5 TraesCS1A01G253800 chr1D 345415140 345416864 1724 True 863.666667 1387 94.849000 1159 2818 3 chr1D.!!$R2 1659
6 TraesCS1A01G253800 chr1D 345479356 345481066 1710 True 468.000000 592 83.963667 534 2270 3 chr1D.!!$R4 1736
7 TraesCS1A01G253800 chr1B 465240522 465245654 5132 False 877.333333 1206 85.960333 733 2381 3 chr1B.!!$F3 1648
8 TraesCS1A01G253800 chr1B 465097731 465099459 1728 False 673.500000 754 83.047500 556 2270 2 chr1B.!!$F2 1714
9 TraesCS1A01G253800 chr1B 465269339 465270627 1288 False 618.500000 841 90.717000 367 1329 2 chr1B.!!$F4 962
10 TraesCS1A01G253800 chr1B 465362622 465365082 2460 False 430.333333 588 92.742333 1355 2815 3 chr1B.!!$F5 1460

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.034186 TTTGCCAGGATGCGGAAGAT 60.034 50.0 0.00 0.00 31.97 2.40 F
233 234 0.036294 GGAAGAACTTCACCGGGAGG 60.036 60.0 6.32 3.23 45.46 4.30 F
1996 7126 0.177836 TGTCGACATATGGGGTGCTG 59.822 55.0 15.76 0.00 0.00 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1037 5755 0.036875 GTGGGTTCCTCCTTGGACTG 59.963 60.0 0.00 0.0 46.14 3.51 R
2033 7164 0.461961 GCCGAGGTGATAGCTCTTGT 59.538 55.0 0.00 0.0 40.38 3.16 R
2938 9582 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.0 17.81 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.212327 AGCGAGGTCACCCTATTGG 58.788 57.895 0.00 0.00 42.86 3.16
19 20 1.523938 GCGAGGTCACCCTATTGGC 60.524 63.158 0.00 0.00 42.86 4.52
20 21 1.227263 CGAGGTCACCCTATTGGCG 60.227 63.158 0.00 0.00 42.86 5.69
21 22 1.905512 GAGGTCACCCTATTGGCGT 59.094 57.895 0.00 0.00 42.86 5.68
22 23 1.117150 GAGGTCACCCTATTGGCGTA 58.883 55.000 0.00 0.00 42.86 4.42
23 24 0.828677 AGGTCACCCTATTGGCGTAC 59.171 55.000 0.00 0.00 40.19 3.67
24 25 0.179065 GGTCACCCTATTGGCGTACC 60.179 60.000 0.00 0.00 37.83 3.34
26 27 1.147600 CACCCTATTGGCGTACCCC 59.852 63.158 0.00 0.00 37.83 4.95
27 28 1.003835 ACCCTATTGGCGTACCCCT 59.996 57.895 0.00 0.00 37.83 4.79
28 29 0.622446 ACCCTATTGGCGTACCCCTT 60.622 55.000 0.00 0.00 37.83 3.95
29 30 0.549469 CCCTATTGGCGTACCCCTTT 59.451 55.000 0.00 0.00 33.59 3.11
30 31 1.675552 CCTATTGGCGTACCCCTTTG 58.324 55.000 0.00 0.00 33.59 2.77
31 32 1.021968 CTATTGGCGTACCCCTTTGC 58.978 55.000 0.00 0.00 33.59 3.68
34 35 2.750237 GGCGTACCCCTTTGCCAG 60.750 66.667 2.70 0.00 46.76 4.85
35 36 2.750237 GCGTACCCCTTTGCCAGG 60.750 66.667 0.00 0.00 43.49 4.45
43 44 4.001248 CTTTGCCAGGATGCGGAA 57.999 55.556 0.00 0.00 31.97 4.30
45 46 0.677731 CTTTGCCAGGATGCGGAAGA 60.678 55.000 0.00 0.00 32.13 2.87
46 47 0.034186 TTTGCCAGGATGCGGAAGAT 60.034 50.000 0.00 0.00 31.97 2.40
47 48 0.464373 TTGCCAGGATGCGGAAGATC 60.464 55.000 0.00 0.00 31.97 2.75
48 49 1.146930 GCCAGGATGCGGAAGATCA 59.853 57.895 0.00 0.00 31.97 2.92
50 51 0.178767 CCAGGATGCGGAAGATCACA 59.821 55.000 0.00 0.00 31.97 3.58
51 52 1.202734 CCAGGATGCGGAAGATCACAT 60.203 52.381 0.00 0.00 31.97 3.21
52 53 2.569059 CAGGATGCGGAAGATCACATT 58.431 47.619 0.00 0.00 0.00 2.71
53 54 2.289820 CAGGATGCGGAAGATCACATTG 59.710 50.000 0.00 0.00 0.00 2.82
55 56 3.144506 GGATGCGGAAGATCACATTGAT 58.855 45.455 0.00 0.00 40.34 2.57
70 71 2.658593 GATCACGGTGATCGGGCG 60.659 66.667 29.27 0.00 43.11 6.13
71 72 3.133767 GATCACGGTGATCGGGCGA 62.134 63.158 29.27 0.00 43.11 5.54
73 74 2.233605 ATCACGGTGATCGGGCGAAA 62.234 55.000 17.62 0.00 43.08 3.46
75 76 2.125673 CGGTGATCGGGCGAAACT 60.126 61.111 0.00 0.00 34.75 2.66
76 77 2.452813 CGGTGATCGGGCGAAACTG 61.453 63.158 0.00 0.00 34.75 3.16
77 78 2.106683 GGTGATCGGGCGAAACTGG 61.107 63.158 0.00 0.00 0.00 4.00
78 79 2.435938 TGATCGGGCGAAACTGGC 60.436 61.111 0.00 0.00 0.00 4.85
79 80 3.564027 GATCGGGCGAAACTGGCG 61.564 66.667 0.00 0.00 34.76 5.69
83 84 3.508840 GGGCGAAACTGGCGGATG 61.509 66.667 0.00 0.00 34.76 3.51
85 86 2.750888 GGCGAAACTGGCGGATGTC 61.751 63.158 0.00 0.00 0.00 3.06
86 87 2.750888 GCGAAACTGGCGGATGTCC 61.751 63.158 0.00 0.00 0.00 4.02
96 97 3.866582 GGATGTCCGAGGCCCCAG 61.867 72.222 0.00 0.00 0.00 4.45
97 98 3.866582 GATGTCCGAGGCCCCAGG 61.867 72.222 0.00 0.00 0.00 4.45
100 101 4.097361 GTCCGAGGCCCCAGGAAC 62.097 72.222 12.38 4.79 35.60 3.62
103 104 3.330720 CGAGGCCCCAGGAACCTT 61.331 66.667 0.00 0.00 32.67 3.50
104 105 2.356667 GAGGCCCCAGGAACCTTG 59.643 66.667 0.00 0.00 32.67 3.61
105 106 3.268032 AGGCCCCAGGAACCTTGG 61.268 66.667 0.00 4.23 0.00 3.61
116 117 3.261354 ACCTTGGGGTTGAGGGTG 58.739 61.111 0.00 0.00 44.73 4.61
117 118 1.386772 ACCTTGGGGTTGAGGGTGA 60.387 57.895 0.00 0.00 44.73 4.02
119 120 0.323725 CCTTGGGGTTGAGGGTGATG 60.324 60.000 0.00 0.00 0.00 3.07
120 121 0.698238 CTTGGGGTTGAGGGTGATGA 59.302 55.000 0.00 0.00 0.00 2.92
121 122 1.285962 CTTGGGGTTGAGGGTGATGAT 59.714 52.381 0.00 0.00 0.00 2.45
122 123 0.918983 TGGGGTTGAGGGTGATGATC 59.081 55.000 0.00 0.00 0.00 2.92
123 124 0.183731 GGGGTTGAGGGTGATGATCC 59.816 60.000 0.00 0.00 0.00 3.36
124 125 0.183731 GGGTTGAGGGTGATGATCCC 59.816 60.000 0.00 0.00 44.90 3.85
133 134 3.991367 GGGTGATGATCCCGTAGTTAAG 58.009 50.000 0.00 0.00 35.27 1.85
134 135 3.391049 GGTGATGATCCCGTAGTTAAGC 58.609 50.000 0.00 0.00 0.00 3.09
135 136 3.391049 GTGATGATCCCGTAGTTAAGCC 58.609 50.000 0.00 0.00 0.00 4.35
136 137 2.035449 TGATGATCCCGTAGTTAAGCCG 59.965 50.000 0.00 0.00 0.00 5.52
137 138 0.748450 TGATCCCGTAGTTAAGCCGG 59.252 55.000 0.00 0.00 41.37 6.13
140 141 4.821177 CCGTAGTTAAGCCGGGTC 57.179 61.111 6.62 0.00 38.09 4.46
142 143 0.247185 CCGTAGTTAAGCCGGGTCAA 59.753 55.000 6.62 0.00 38.09 3.18
143 144 1.636988 CGTAGTTAAGCCGGGTCAAG 58.363 55.000 6.62 0.00 0.00 3.02
144 145 1.067354 CGTAGTTAAGCCGGGTCAAGT 60.067 52.381 6.62 3.83 0.00 3.16
147 148 1.418637 AGTTAAGCCGGGTCAAGTCAA 59.581 47.619 6.62 0.00 0.00 3.18
148 149 2.039879 AGTTAAGCCGGGTCAAGTCAAT 59.960 45.455 6.62 0.00 0.00 2.57
149 150 2.107950 TAAGCCGGGTCAAGTCAATG 57.892 50.000 6.62 0.00 0.00 2.82
150 151 0.609131 AAGCCGGGTCAAGTCAATGG 60.609 55.000 6.62 0.00 0.00 3.16
151 152 1.002624 GCCGGGTCAAGTCAATGGA 60.003 57.895 2.18 0.00 0.00 3.41
152 153 1.026718 GCCGGGTCAAGTCAATGGAG 61.027 60.000 2.18 0.00 0.00 3.86
153 154 1.026718 CCGGGTCAAGTCAATGGAGC 61.027 60.000 0.00 0.00 0.00 4.70
154 155 1.026718 CGGGTCAAGTCAATGGAGCC 61.027 60.000 0.00 0.00 43.85 4.70
155 156 0.329596 GGGTCAAGTCAATGGAGCCT 59.670 55.000 0.00 0.00 43.91 4.58
156 157 1.559682 GGGTCAAGTCAATGGAGCCTA 59.440 52.381 0.00 0.00 43.91 3.93
157 158 2.633488 GGTCAAGTCAATGGAGCCTAC 58.367 52.381 0.00 0.00 0.00 3.18
158 159 2.271800 GTCAAGTCAATGGAGCCTACG 58.728 52.381 0.00 0.00 0.00 3.51
159 160 1.899814 TCAAGTCAATGGAGCCTACGT 59.100 47.619 0.00 0.00 0.00 3.57
160 161 3.093814 TCAAGTCAATGGAGCCTACGTA 58.906 45.455 0.00 0.00 0.00 3.57
161 162 3.130516 TCAAGTCAATGGAGCCTACGTAG 59.869 47.826 15.92 15.92 0.00 3.51
162 163 3.014304 AGTCAATGGAGCCTACGTAGA 57.986 47.619 24.15 3.63 0.00 2.59
163 164 3.362706 AGTCAATGGAGCCTACGTAGAA 58.637 45.455 24.15 4.46 0.00 2.10
164 165 3.130693 AGTCAATGGAGCCTACGTAGAAC 59.869 47.826 24.15 14.89 0.00 3.01
165 166 3.130693 GTCAATGGAGCCTACGTAGAACT 59.869 47.826 24.15 19.23 0.00 3.01
166 167 3.380637 TCAATGGAGCCTACGTAGAACTC 59.619 47.826 24.15 25.00 0.00 3.01
167 168 1.376543 TGGAGCCTACGTAGAACTCG 58.623 55.000 24.15 7.75 31.28 4.18
169 170 1.330213 GGAGCCTACGTAGAACTCGTC 59.670 57.143 24.15 13.16 41.72 4.20
170 171 1.005137 GAGCCTACGTAGAACTCGTCG 60.005 57.143 24.15 5.55 41.72 5.12
171 172 1.002366 GCCTACGTAGAACTCGTCGA 58.998 55.000 24.15 0.00 41.72 4.20
172 173 1.394917 GCCTACGTAGAACTCGTCGAA 59.605 52.381 24.15 0.00 41.72 3.71
174 175 2.926200 CCTACGTAGAACTCGTCGAAGA 59.074 50.000 24.15 0.03 41.72 2.87
175 176 3.000122 CCTACGTAGAACTCGTCGAAGAG 60.000 52.174 24.15 24.21 41.72 2.85
176 177 2.681706 ACGTAGAACTCGTCGAAGAGA 58.318 47.619 30.95 9.17 40.57 3.10
177 178 2.667481 ACGTAGAACTCGTCGAAGAGAG 59.333 50.000 30.95 20.48 40.57 3.20
178 179 2.535335 CGTAGAACTCGTCGAAGAGAGC 60.535 54.545 30.95 21.38 40.57 4.09
182 183 0.736053 ACTCGTCGAAGAGAGCCATC 59.264 55.000 30.95 0.00 40.57 3.51
183 184 0.735471 CTCGTCGAAGAGAGCCATCA 59.265 55.000 21.96 0.00 40.57 3.07
184 185 0.452184 TCGTCGAAGAGAGCCATCAC 59.548 55.000 0.00 0.00 36.95 3.06
185 186 0.453793 CGTCGAAGAGAGCCATCACT 59.546 55.000 0.00 0.00 36.95 3.41
186 187 1.135257 CGTCGAAGAGAGCCATCACTT 60.135 52.381 0.00 0.00 38.82 3.16
187 188 2.535331 GTCGAAGAGAGCCATCACTTC 58.465 52.381 5.64 5.64 44.83 3.01
190 191 2.903798 GAAGAGAGCCATCACTTCAGG 58.096 52.381 9.59 0.00 46.46 3.86
191 192 1.949799 AGAGAGCCATCACTTCAGGT 58.050 50.000 0.00 0.00 0.00 4.00
192 193 2.264455 AGAGAGCCATCACTTCAGGTT 58.736 47.619 0.00 0.00 0.00 3.50
194 195 2.746362 GAGAGCCATCACTTCAGGTTTG 59.254 50.000 0.00 0.00 0.00 2.93
195 196 2.373169 AGAGCCATCACTTCAGGTTTGA 59.627 45.455 0.00 0.00 0.00 2.69
196 197 3.009916 AGAGCCATCACTTCAGGTTTGAT 59.990 43.478 0.00 0.00 32.27 2.57
197 198 3.087031 AGCCATCACTTCAGGTTTGATG 58.913 45.455 4.18 4.18 44.20 3.07
198 199 3.084039 GCCATCACTTCAGGTTTGATGA 58.916 45.455 11.49 0.00 46.45 2.92
199 200 3.119708 GCCATCACTTCAGGTTTGATGAC 60.120 47.826 11.49 0.00 46.45 3.06
201 202 4.083110 CCATCACTTCAGGTTTGATGACAC 60.083 45.833 11.49 0.00 46.45 3.67
202 203 4.422073 TCACTTCAGGTTTGATGACACT 57.578 40.909 0.00 0.00 33.81 3.55
203 204 4.380531 TCACTTCAGGTTTGATGACACTC 58.619 43.478 0.00 0.00 33.81 3.51
204 205 3.499918 CACTTCAGGTTTGATGACACTCC 59.500 47.826 0.00 0.00 33.81 3.85
206 207 3.407424 TCAGGTTTGATGACACTCCAG 57.593 47.619 0.00 0.00 0.00 3.86
207 208 2.972021 TCAGGTTTGATGACACTCCAGA 59.028 45.455 0.00 0.00 0.00 3.86
208 209 3.390967 TCAGGTTTGATGACACTCCAGAA 59.609 43.478 0.00 0.00 0.00 3.02
209 210 3.499918 CAGGTTTGATGACACTCCAGAAC 59.500 47.826 0.00 0.00 0.00 3.01
210 211 2.480419 GGTTTGATGACACTCCAGAACG 59.520 50.000 0.00 0.00 0.00 3.95
211 212 3.131396 GTTTGATGACACTCCAGAACGT 58.869 45.455 0.00 0.00 0.00 3.99
212 213 2.724977 TGATGACACTCCAGAACGTC 57.275 50.000 0.00 0.00 0.00 4.34
214 215 2.029918 TGATGACACTCCAGAACGTCTG 60.030 50.000 7.72 7.72 43.91 3.51
230 231 0.685097 TCTGGAAGAACTTCACCGGG 59.315 55.000 6.32 0.00 42.31 5.73
232 233 0.685097 TGGAAGAACTTCACCGGGAG 59.315 55.000 6.32 2.95 41.20 4.30
233 234 0.036294 GGAAGAACTTCACCGGGAGG 60.036 60.000 6.32 3.23 45.46 4.30
234 235 3.979902 GGAAGAACTTCACCGGGAGGC 62.980 61.905 6.32 0.00 44.56 4.70
261 262 3.470888 CTGGGGCGGAAGTCGGAT 61.471 66.667 0.00 0.00 39.69 4.18
262 263 3.006728 TGGGGCGGAAGTCGGATT 61.007 61.111 0.00 0.00 39.69 3.01
264 265 2.582436 GGGCGGAAGTCGGATTCA 59.418 61.111 3.49 0.00 39.69 2.57
266 267 1.160329 GGGCGGAAGTCGGATTCATG 61.160 60.000 3.49 0.00 39.69 3.07
268 269 1.776034 GCGGAAGTCGGATTCATGCC 61.776 60.000 0.00 0.00 39.69 4.40
269 270 1.160329 CGGAAGTCGGATTCATGCCC 61.160 60.000 0.00 0.00 34.75 5.36
270 271 0.181350 GGAAGTCGGATTCATGCCCT 59.819 55.000 0.00 0.00 0.00 5.19
272 273 1.672881 GAAGTCGGATTCATGCCCTTG 59.327 52.381 0.00 0.00 0.00 3.61
273 274 0.911769 AGTCGGATTCATGCCCTTGA 59.088 50.000 0.00 0.00 0.00 3.02
274 275 1.492176 AGTCGGATTCATGCCCTTGAT 59.508 47.619 0.00 0.00 0.00 2.57
275 276 1.605710 GTCGGATTCATGCCCTTGATG 59.394 52.381 0.00 0.00 0.00 3.07
276 277 0.956633 CGGATTCATGCCCTTGATGG 59.043 55.000 0.00 0.00 0.00 3.51
292 293 2.300996 TGGCCATCCAGACTTCCTC 58.699 57.895 0.00 0.00 37.47 3.71
293 294 0.252881 TGGCCATCCAGACTTCCTCT 60.253 55.000 0.00 0.00 37.47 3.69
294 295 0.915364 GGCCATCCAGACTTCCTCTT 59.085 55.000 0.00 0.00 0.00 2.85
296 297 1.134250 GCCATCCAGACTTCCTCTTCC 60.134 57.143 0.00 0.00 0.00 3.46
297 298 1.137872 CCATCCAGACTTCCTCTTCCG 59.862 57.143 0.00 0.00 0.00 4.30
298 299 2.103373 CATCCAGACTTCCTCTTCCGA 58.897 52.381 0.00 0.00 0.00 4.55
299 300 1.840737 TCCAGACTTCCTCTTCCGAG 58.159 55.000 0.00 0.00 37.01 4.63
301 302 2.171840 CCAGACTTCCTCTTCCGAGAA 58.828 52.381 0.00 0.00 39.74 2.87
302 303 2.094442 CCAGACTTCCTCTTCCGAGAAC 60.094 54.545 0.00 0.00 39.74 3.01
303 304 2.558795 CAGACTTCCTCTTCCGAGAACA 59.441 50.000 0.00 0.00 39.74 3.18
304 305 3.005897 CAGACTTCCTCTTCCGAGAACAA 59.994 47.826 0.00 0.00 39.74 2.83
305 306 3.257127 AGACTTCCTCTTCCGAGAACAAG 59.743 47.826 0.00 0.00 39.74 3.16
306 307 2.300437 ACTTCCTCTTCCGAGAACAAGG 59.700 50.000 0.00 0.00 39.74 3.61
307 308 0.608640 TCCTCTTCCGAGAACAAGGC 59.391 55.000 0.00 0.00 39.74 4.35
308 309 0.391793 CCTCTTCCGAGAACAAGGCC 60.392 60.000 0.00 0.00 39.74 5.19
311 312 1.291877 CTTCCGAGAACAAGGCCGTG 61.292 60.000 17.83 17.83 0.00 4.94
313 314 1.738099 CCGAGAACAAGGCCGTGAG 60.738 63.158 26.25 10.16 0.00 3.51
335 336 3.499737 GCGTTCTCGGCCACCATG 61.500 66.667 2.24 0.00 37.56 3.66
336 337 2.264480 CGTTCTCGGCCACCATGA 59.736 61.111 2.24 0.00 0.00 3.07
338 339 1.431488 CGTTCTCGGCCACCATGATG 61.431 60.000 2.24 0.00 0.00 3.07
339 340 1.451927 TTCTCGGCCACCATGATGC 60.452 57.895 2.24 0.00 0.00 3.91
340 341 3.274586 CTCGGCCACCATGATGCG 61.275 66.667 2.24 0.00 0.00 4.73
343 344 3.896133 GGCCACCATGATGCGCTG 61.896 66.667 9.73 0.00 0.00 5.18
344 345 3.896133 GCCACCATGATGCGCTGG 61.896 66.667 9.73 10.81 38.55 4.85
345 346 2.438975 CCACCATGATGCGCTGGT 60.439 61.111 12.90 12.90 46.68 4.00
347 348 2.352422 ACCATGATGCGCTGGTGT 59.648 55.556 17.37 0.44 44.06 4.16
348 349 1.303561 ACCATGATGCGCTGGTGTT 60.304 52.632 17.37 0.00 44.06 3.32
349 350 1.308069 ACCATGATGCGCTGGTGTTC 61.308 55.000 17.37 1.82 44.06 3.18
350 351 1.061411 CATGATGCGCTGGTGTTCG 59.939 57.895 9.73 0.00 0.00 3.95
351 352 2.108514 ATGATGCGCTGGTGTTCGG 61.109 57.895 9.73 0.00 0.00 4.30
358 359 2.275380 GCTGGTGTTCGGCCCAAAT 61.275 57.895 0.00 0.00 41.83 2.32
359 360 0.963355 GCTGGTGTTCGGCCCAAATA 60.963 55.000 0.00 0.00 41.83 1.40
360 361 1.762708 CTGGTGTTCGGCCCAAATAT 58.237 50.000 0.00 0.00 0.00 1.28
361 362 1.676006 CTGGTGTTCGGCCCAAATATC 59.324 52.381 0.00 0.00 0.00 1.63
362 363 0.661020 GGTGTTCGGCCCAAATATCG 59.339 55.000 0.00 0.00 0.00 2.92
365 366 1.149627 TTCGGCCCAAATATCGGGG 59.850 57.895 11.27 9.28 44.67 5.73
379 380 2.413310 TCGGGGGTCTTGCTAAAATC 57.587 50.000 0.00 0.00 0.00 2.17
388 389 4.021981 GGTCTTGCTAAAATCTTGGTTGCT 60.022 41.667 0.00 0.00 0.00 3.91
389 390 4.919754 GTCTTGCTAAAATCTTGGTTGCTG 59.080 41.667 0.00 0.00 0.00 4.41
394 395 3.733443 AAAATCTTGGTTGCTGTGGAC 57.267 42.857 0.00 0.00 0.00 4.02
395 396 2.664402 AATCTTGGTTGCTGTGGACT 57.336 45.000 0.00 0.00 0.00 3.85
396 397 3.788227 AATCTTGGTTGCTGTGGACTA 57.212 42.857 0.00 0.00 0.00 2.59
399 400 4.901197 TCTTGGTTGCTGTGGACTATTA 57.099 40.909 0.00 0.00 0.00 0.98
402 403 6.346096 TCTTGGTTGCTGTGGACTATTATAC 58.654 40.000 0.00 0.00 0.00 1.47
403 404 5.950544 TGGTTGCTGTGGACTATTATACT 57.049 39.130 0.00 0.00 0.00 2.12
404 405 5.670485 TGGTTGCTGTGGACTATTATACTG 58.330 41.667 0.00 0.00 0.00 2.74
406 407 6.070481 TGGTTGCTGTGGACTATTATACTGAA 60.070 38.462 0.00 0.00 0.00 3.02
407 408 6.992715 GGTTGCTGTGGACTATTATACTGAAT 59.007 38.462 0.00 0.00 0.00 2.57
408 409 7.041780 GGTTGCTGTGGACTATTATACTGAATG 60.042 40.741 0.00 0.00 0.00 2.67
413 5103 9.579768 CTGTGGACTATTATACTGAATGCTATC 57.420 37.037 0.00 0.00 0.00 2.08
451 5141 5.769835 TCTTCTCATAGGGCCAATGAAAAT 58.230 37.500 17.83 0.00 33.13 1.82
575 5271 6.042143 GCTCTTTTCACTGGTTTGAATTTGA 58.958 36.000 0.00 0.00 35.42 2.69
639 5339 7.231317 AGCAATTCTTTCCTGAAAGTGACATTA 59.769 33.333 16.82 0.00 45.88 1.90
726 5429 7.406553 TCTGAATTGCTTAACATATACGCAAC 58.593 34.615 2.12 0.00 42.52 4.17
727 5430 6.491394 TGAATTGCTTAACATATACGCAACC 58.509 36.000 2.12 0.00 42.52 3.77
846 5552 4.478206 AGTTCATGGTCTATGGTGTCTG 57.522 45.455 0.00 0.00 37.39 3.51
859 5565 4.015872 TGGTGTCTGTGGTCCTTTATTC 57.984 45.455 0.00 0.00 0.00 1.75
864 5570 6.349363 GGTGTCTGTGGTCCTTTATTCATTTC 60.349 42.308 0.00 0.00 0.00 2.17
928 5645 6.765512 TGATGTGATCAACAGTTGTGTTCTAA 59.234 34.615 13.14 0.00 43.88 2.10
929 5646 6.603237 TGTGATCAACAGTTGTGTTCTAAG 57.397 37.500 13.14 0.00 43.88 2.18
936 5653 8.500753 TCAACAGTTGTGTTCTAAGTAACATT 57.499 30.769 13.14 0.00 43.88 2.71
986 5704 7.839680 AACTCATTTTGGATTCTTTGTAGGT 57.160 32.000 0.00 0.00 0.00 3.08
1037 5755 0.971959 TCCATGCTGGACAAATGGGC 60.972 55.000 11.61 0.00 42.67 5.36
1084 6126 7.939782 TGAGTTTGAGATTGATGCAAGTAAAA 58.060 30.769 0.00 0.00 0.00 1.52
1305 6360 6.607019 ACAATTAGTTTCCCCTACTTGTTCA 58.393 36.000 0.00 0.00 37.46 3.18
1351 6418 2.423446 TGCTTCAGCCATTCATGCTA 57.577 45.000 0.00 0.00 41.18 3.49
1526 6595 3.966665 AGGACTCCAAAAATTTGCTTGGA 59.033 39.130 18.86 18.86 46.99 3.53
1659 6728 5.321102 TGTTAACATGGGCAACACTTCTAT 58.679 37.500 3.59 0.00 39.74 1.98
1660 6729 5.414454 TGTTAACATGGGCAACACTTCTATC 59.586 40.000 3.59 0.00 39.74 2.08
1676 6745 5.468072 ACTTCTATCGGCATTGCATAAAGAG 59.532 40.000 11.39 2.72 0.00 2.85
1759 6870 2.159517 CGGAAAACCTGAATGCTACAGC 60.160 50.000 0.00 0.00 42.50 4.40
1761 6872 2.887151 AAACCTGAATGCTACAGCCT 57.113 45.000 0.00 0.00 41.18 4.58
1819 6942 5.801350 GTGAATAACACTAGCAATGCTGA 57.199 39.130 19.25 1.14 45.13 4.26
1922 7045 0.244721 GATGTCAAGCTGGGCAAACC 59.755 55.000 0.00 0.00 40.81 3.27
1992 7122 2.038952 CCATGATGTCGACATATGGGGT 59.961 50.000 32.84 17.63 36.57 4.95
1996 7126 0.177836 TGTCGACATATGGGGTGCTG 59.822 55.000 15.76 0.00 0.00 4.41
2007 7138 2.268920 GGTGCTGATGCGGAGGAA 59.731 61.111 0.00 0.00 43.34 3.36
2033 7164 0.389817 CCGTCGAGGTTTGCAGATGA 60.390 55.000 4.18 0.00 34.51 2.92
2101 7232 3.003394 CCATCTGTGTTGGCCAGAATA 57.997 47.619 5.11 0.00 41.93 1.75
2155 7286 1.070786 GTCCTCCAGCGGTTTGTGA 59.929 57.895 0.00 0.00 0.00 3.58
2279 7683 3.499918 GGCTCTGTATATGGACAACATGC 59.500 47.826 0.00 0.00 40.82 4.06
2280 7684 4.384056 GCTCTGTATATGGACAACATGCT 58.616 43.478 0.00 0.00 40.82 3.79
2281 7685 5.511373 GGCTCTGTATATGGACAACATGCTA 60.511 44.000 0.00 0.00 40.82 3.49
2285 8168 8.245195 TCTGTATATGGACAACATGCTAAGTA 57.755 34.615 0.00 0.00 40.82 2.24
2316 8375 8.964533 ATGTTCTATCCTGTATCTCCTGTATT 57.035 34.615 0.00 0.00 0.00 1.89
2346 8405 1.301677 GCGAGCAACTTGGAAGAGGG 61.302 60.000 0.00 0.00 0.00 4.30
2584 8708 5.016051 TCAGATTCAGTTAGCCACATCTC 57.984 43.478 0.00 0.00 0.00 2.75
2629 9239 6.127535 GCCATTTCATCATTTCTTCTTCCTCA 60.128 38.462 0.00 0.00 0.00 3.86
2657 9269 1.823041 CCCTCTCCTACGACGGGTC 60.823 68.421 0.00 0.00 0.00 4.46
2791 9435 2.475111 CCACACGTACATCTTGACACAC 59.525 50.000 0.00 0.00 0.00 3.82
2794 9438 1.968493 ACGTACATCTTGACACACCCT 59.032 47.619 0.00 0.00 0.00 4.34
2801 9445 4.339247 ACATCTTGACACACCCTTTTCTTG 59.661 41.667 0.00 0.00 0.00 3.02
2815 9459 0.756294 TTCTTGGTTCGCTGAGTCCA 59.244 50.000 0.00 0.00 0.00 4.02
2818 9462 0.396435 TTGGTTCGCTGAGTCCATGT 59.604 50.000 0.00 0.00 0.00 3.21
2819 9463 0.396435 TGGTTCGCTGAGTCCATGTT 59.604 50.000 0.00 0.00 0.00 2.71
2820 9464 1.621317 TGGTTCGCTGAGTCCATGTTA 59.379 47.619 0.00 0.00 0.00 2.41
2821 9465 2.271800 GGTTCGCTGAGTCCATGTTAG 58.728 52.381 0.00 0.00 0.00 2.34
2822 9466 2.094182 GGTTCGCTGAGTCCATGTTAGA 60.094 50.000 0.00 0.00 0.00 2.10
2823 9467 2.924290 GTTCGCTGAGTCCATGTTAGAC 59.076 50.000 0.00 0.00 34.31 2.59
2825 9469 3.617284 TCGCTGAGTCCATGTTAGACTA 58.383 45.455 3.43 0.00 44.55 2.59
2826 9470 4.207955 TCGCTGAGTCCATGTTAGACTAT 58.792 43.478 3.43 0.00 44.55 2.12
2827 9471 4.036852 TCGCTGAGTCCATGTTAGACTATG 59.963 45.833 3.43 2.00 44.55 2.23
2828 9472 4.202060 CGCTGAGTCCATGTTAGACTATGT 60.202 45.833 3.43 0.00 44.55 2.29
2829 9473 5.008712 CGCTGAGTCCATGTTAGACTATGTA 59.991 44.000 3.43 0.00 44.55 2.29
2830 9474 6.294231 CGCTGAGTCCATGTTAGACTATGTAT 60.294 42.308 3.43 0.00 44.55 2.29
2831 9475 7.094762 CGCTGAGTCCATGTTAGACTATGTATA 60.095 40.741 3.43 0.00 44.55 1.47
2832 9476 8.240682 GCTGAGTCCATGTTAGACTATGTATAG 58.759 40.741 3.43 0.00 44.55 1.31
2833 9477 8.112016 TGAGTCCATGTTAGACTATGTATAGC 57.888 38.462 3.43 0.00 44.55 2.97
2834 9478 7.945109 TGAGTCCATGTTAGACTATGTATAGCT 59.055 37.037 3.43 0.00 44.55 3.32
2835 9479 8.713708 AGTCCATGTTAGACTATGTATAGCTT 57.286 34.615 0.00 0.00 42.76 3.74
2836 9480 8.798402 AGTCCATGTTAGACTATGTATAGCTTC 58.202 37.037 0.00 0.00 42.76 3.86
2837 9481 8.798402 GTCCATGTTAGACTATGTATAGCTTCT 58.202 37.037 0.00 0.00 33.68 2.85
2838 9482 8.797438 TCCATGTTAGACTATGTATAGCTTCTG 58.203 37.037 0.00 0.00 33.68 3.02
2839 9483 8.580720 CCATGTTAGACTATGTATAGCTTCTGT 58.419 37.037 0.00 0.00 33.68 3.41
2842 9486 9.848710 TGTTAGACTATGTATAGCTTCTGTACT 57.151 33.333 0.00 0.00 33.68 2.73
2865 9509 8.243289 ACTTATGTACGTATTGTAACACAACC 57.757 34.615 0.00 0.00 41.40 3.77
2866 9510 7.871973 ACTTATGTACGTATTGTAACACAACCA 59.128 33.333 0.00 0.00 41.40 3.67
2867 9511 8.774890 TTATGTACGTATTGTAACACAACCAT 57.225 30.769 0.00 0.00 41.40 3.55
2868 9512 7.675962 ATGTACGTATTGTAACACAACCATT 57.324 32.000 0.00 0.00 41.40 3.16
2869 9513 8.774890 ATGTACGTATTGTAACACAACCATTA 57.225 30.769 0.00 0.00 41.40 1.90
2870 9514 8.774890 TGTACGTATTGTAACACAACCATTAT 57.225 30.769 0.00 0.00 41.40 1.28
2871 9515 9.866798 TGTACGTATTGTAACACAACCATTATA 57.133 29.630 0.00 0.00 41.40 0.98
2893 9537 9.744125 TTATATATAATGAGATAAGCCACCCCT 57.256 33.333 0.81 0.00 0.00 4.79
2895 9539 7.682787 ATATAATGAGATAAGCCACCCCTAG 57.317 40.000 0.00 0.00 0.00 3.02
2896 9540 3.637821 ATGAGATAAGCCACCCCTAGA 57.362 47.619 0.00 0.00 0.00 2.43
2897 9541 2.964209 TGAGATAAGCCACCCCTAGAG 58.036 52.381 0.00 0.00 0.00 2.43
2898 9542 2.252714 GAGATAAGCCACCCCTAGAGG 58.747 57.143 0.00 0.00 0.00 3.69
2911 9555 2.911484 CCTAGAGGGTTGTGCTGATTC 58.089 52.381 0.00 0.00 0.00 2.52
2912 9556 2.420687 CCTAGAGGGTTGTGCTGATTCC 60.421 54.545 0.00 0.00 0.00 3.01
2917 9561 1.337118 GGTTGTGCTGATTCCCCAAA 58.663 50.000 0.00 0.00 0.00 3.28
2919 9563 2.302733 GGTTGTGCTGATTCCCCAAAAT 59.697 45.455 0.00 0.00 0.00 1.82
2931 9575 9.586435 CTGATTCCCCAAAATTTATTGTCTTAC 57.414 33.333 0.00 0.00 0.00 2.34
2935 9579 7.846066 TCCCCAAAATTTATTGTCTTACATGG 58.154 34.615 0.00 0.00 0.00 3.66
2936 9580 7.456269 TCCCCAAAATTTATTGTCTTACATGGT 59.544 33.333 0.00 0.00 0.00 3.55
2937 9581 8.754080 CCCCAAAATTTATTGTCTTACATGGTA 58.246 33.333 0.00 0.00 0.00 3.25
2944 9588 4.465632 TTGTCTTACATGGTATCACGCT 57.534 40.909 0.00 0.00 0.00 5.07
2946 9590 5.183014 TGTCTTACATGGTATCACGCTAG 57.817 43.478 0.00 0.00 0.00 3.42
2947 9591 4.037565 TGTCTTACATGGTATCACGCTAGG 59.962 45.833 0.00 0.00 0.00 3.02
2949 9593 4.647853 TCTTACATGGTATCACGCTAGGTT 59.352 41.667 0.00 0.00 0.00 3.50
2950 9594 5.829391 TCTTACATGGTATCACGCTAGGTTA 59.171 40.000 0.00 0.00 0.00 2.85
2951 9595 4.317671 ACATGGTATCACGCTAGGTTAC 57.682 45.455 0.00 0.00 0.00 2.50
2952 9596 3.243301 ACATGGTATCACGCTAGGTTACG 60.243 47.826 0.00 0.00 0.00 3.18
2953 9597 2.642427 TGGTATCACGCTAGGTTACGA 58.358 47.619 0.00 0.00 0.00 3.43
2954 9598 3.216800 TGGTATCACGCTAGGTTACGAT 58.783 45.455 0.00 0.00 0.00 3.73
2956 9600 2.682952 ATCACGCTAGGTTACGATCG 57.317 50.000 14.88 14.88 0.00 3.69
2957 9601 0.028505 TCACGCTAGGTTACGATCGC 59.971 55.000 16.60 0.00 0.00 4.58
2958 9602 0.029035 CACGCTAGGTTACGATCGCT 59.971 55.000 16.60 6.62 0.00 4.93
2959 9603 0.737219 ACGCTAGGTTACGATCGCTT 59.263 50.000 16.60 0.00 0.00 4.68
2960 9604 1.268437 ACGCTAGGTTACGATCGCTTC 60.268 52.381 16.60 5.25 0.00 3.86
2961 9605 1.768510 GCTAGGTTACGATCGCTTCC 58.231 55.000 16.60 14.35 0.00 3.46
2962 9606 1.925068 GCTAGGTTACGATCGCTTCCG 60.925 57.143 16.60 4.59 0.00 4.30
2963 9607 0.029834 TAGGTTACGATCGCTTCCGC 59.970 55.000 16.60 0.00 0.00 5.54
2964 9608 1.226888 GGTTACGATCGCTTCCGCT 60.227 57.895 16.60 0.00 0.00 5.52
2965 9609 0.804933 GGTTACGATCGCTTCCGCTT 60.805 55.000 16.60 0.00 0.00 4.68
2966 9610 0.571197 GTTACGATCGCTTCCGCTTC 59.429 55.000 16.60 0.00 0.00 3.86
2967 9611 0.454600 TTACGATCGCTTCCGCTTCT 59.545 50.000 16.60 0.00 0.00 2.85
2969 9613 0.454600 ACGATCGCTTCCGCTTCTAA 59.545 50.000 16.60 0.00 0.00 2.10
2970 9614 1.135199 ACGATCGCTTCCGCTTCTAAA 60.135 47.619 16.60 0.00 0.00 1.85
2971 9615 1.255600 CGATCGCTTCCGCTTCTAAAC 59.744 52.381 0.26 0.00 0.00 2.01
2972 9616 1.593469 GATCGCTTCCGCTTCTAAACC 59.407 52.381 0.00 0.00 0.00 3.27
2973 9617 0.390735 TCGCTTCCGCTTCTAAACCC 60.391 55.000 0.00 0.00 0.00 4.11
2974 9618 0.391263 CGCTTCCGCTTCTAAACCCT 60.391 55.000 0.00 0.00 0.00 4.34
2976 9620 2.675889 CGCTTCCGCTTCTAAACCCTAA 60.676 50.000 0.00 0.00 0.00 2.69
2978 9622 4.700700 GCTTCCGCTTCTAAACCCTAATA 58.299 43.478 0.00 0.00 0.00 0.98
2979 9623 4.510711 GCTTCCGCTTCTAAACCCTAATAC 59.489 45.833 0.00 0.00 0.00 1.89
2980 9624 4.677673 TCCGCTTCTAAACCCTAATACC 57.322 45.455 0.00 0.00 0.00 2.73
2981 9625 3.389002 TCCGCTTCTAAACCCTAATACCC 59.611 47.826 0.00 0.00 0.00 3.69
2982 9626 3.387397 CGCTTCTAAACCCTAATACCCG 58.613 50.000 0.00 0.00 0.00 5.28
2983 9627 3.068590 CGCTTCTAAACCCTAATACCCGA 59.931 47.826 0.00 0.00 0.00 5.14
2984 9628 4.375272 GCTTCTAAACCCTAATACCCGAC 58.625 47.826 0.00 0.00 0.00 4.79
2990 10054 2.355481 CTAATACCCGACCGCCGC 60.355 66.667 0.00 0.00 36.84 6.53
3074 10159 4.265056 GCCACCACCGGTTCCACT 62.265 66.667 2.97 0.00 31.02 4.00
3077 10162 3.168528 ACCACCGGTTCCACTGCT 61.169 61.111 2.97 0.00 27.29 4.24
3078 10163 2.669569 CCACCGGTTCCACTGCTG 60.670 66.667 2.97 0.00 0.00 4.41
3079 10164 3.357079 CACCGGTTCCACTGCTGC 61.357 66.667 2.97 0.00 0.00 5.25
3080 10165 4.988598 ACCGGTTCCACTGCTGCG 62.989 66.667 0.00 0.00 0.00 5.18
3085 10170 4.269523 TTCCACTGCTGCGGGCTT 62.270 61.111 13.87 0.00 42.39 4.35
3088 10173 4.711949 CACTGCTGCGGGCTTCCT 62.712 66.667 13.87 0.00 42.39 3.36
3100 10185 2.042435 CTTCCTCCCGGCCTCTCT 60.042 66.667 0.00 0.00 0.00 3.10
3101 10186 1.687493 CTTCCTCCCGGCCTCTCTT 60.687 63.158 0.00 0.00 0.00 2.85
3102 10187 1.965754 CTTCCTCCCGGCCTCTCTTG 61.966 65.000 0.00 0.00 0.00 3.02
3103 10188 4.168291 CCTCCCGGCCTCTCTTGC 62.168 72.222 0.00 0.00 0.00 4.01
3104 10189 4.521062 CTCCCGGCCTCTCTTGCG 62.521 72.222 0.00 0.00 0.00 4.85
3109 10194 3.780173 GGCCTCTCTTGCGGCTCT 61.780 66.667 0.00 0.00 43.22 4.09
3111 10196 2.511145 CCTCTCTTGCGGCTCTGC 60.511 66.667 0.00 0.00 0.00 4.26
3112 10197 2.578128 CTCTCTTGCGGCTCTGCT 59.422 61.111 0.00 0.00 35.36 4.24
3113 10198 1.519013 CTCTCTTGCGGCTCTGCTC 60.519 63.158 0.00 0.00 35.36 4.26
3114 10199 2.223200 CTCTCTTGCGGCTCTGCTCA 62.223 60.000 0.00 0.00 35.36 4.26
3115 10200 1.375140 CTCTTGCGGCTCTGCTCAA 60.375 57.895 0.00 0.00 35.36 3.02
3117 10202 2.669569 TTGCGGCTCTGCTCAACC 60.670 61.111 0.00 0.00 35.36 3.77
3118 10203 3.182590 TTGCGGCTCTGCTCAACCT 62.183 57.895 0.00 0.00 35.36 3.50
3119 10204 2.817396 GCGGCTCTGCTCAACCTC 60.817 66.667 0.00 0.00 0.00 3.85
3123 10216 2.125350 CTCTGCTCAACCTCCCGC 60.125 66.667 0.00 0.00 0.00 6.13
3124 10217 2.604686 TCTGCTCAACCTCCCGCT 60.605 61.111 0.00 0.00 0.00 5.52
3127 10220 3.760035 GCTCAACCTCCCGCTCGA 61.760 66.667 0.00 0.00 0.00 4.04
3129 10222 1.227089 CTCAACCTCCCGCTCGATG 60.227 63.158 0.00 0.00 0.00 3.84
3130 10223 2.892425 CAACCTCCCGCTCGATGC 60.892 66.667 0.00 0.00 38.57 3.91
3131 10224 4.162690 AACCTCCCGCTCGATGCC 62.163 66.667 0.00 0.00 38.78 4.40
3134 10227 4.933064 CTCCCGCTCGATGCCGTC 62.933 72.222 0.00 0.00 38.78 4.79
3136 10229 4.933064 CCCGCTCGATGCCGTCTC 62.933 72.222 0.00 0.00 38.78 3.36
3137 10230 4.933064 CCGCTCGATGCCGTCTCC 62.933 72.222 0.00 0.00 38.78 3.71
3142 10235 2.582498 CGATGCCGTCTCCGTTCC 60.582 66.667 0.00 0.00 0.00 3.62
3154 10247 4.925576 CGTTCCGGCTCCGATCGG 62.926 72.222 28.62 28.62 46.89 4.18
3156 10249 4.826404 TTCCGGCTCCGATCGGGA 62.826 66.667 32.79 19.13 45.69 5.14
3159 10252 3.833645 CGGCTCCGATCGGGACAA 61.834 66.667 32.79 13.65 40.94 3.18
3161 10254 2.107141 GCTCCGATCGGGACAAGG 59.893 66.667 32.79 16.51 40.94 3.61
3162 10255 2.423898 GCTCCGATCGGGACAAGGA 61.424 63.158 32.79 11.72 40.94 3.36
3163 10256 1.736586 CTCCGATCGGGACAAGGAG 59.263 63.158 32.79 17.47 40.94 3.69
3164 10257 2.107141 CCGATCGGGACAAGGAGC 59.893 66.667 26.95 0.00 38.47 4.70
3165 10258 2.721167 CCGATCGGGACAAGGAGCA 61.721 63.158 26.95 0.00 38.47 4.26
3168 10261 0.598680 GATCGGGACAAGGAGCATCG 60.599 60.000 0.00 0.00 34.37 3.84
3169 10262 2.032860 ATCGGGACAAGGAGCATCGG 62.033 60.000 0.00 0.00 34.37 4.18
3170 10263 2.514824 GGGACAAGGAGCATCGGC 60.515 66.667 0.00 0.00 41.61 5.54
3180 10273 2.496817 GCATCGGCTCCGTCTTCT 59.503 61.111 8.28 0.00 40.74 2.85
3181 10274 1.590259 GCATCGGCTCCGTCTTCTC 60.590 63.158 8.28 0.00 40.74 2.87
3183 10276 1.379977 ATCGGCTCCGTCTTCTCCA 60.380 57.895 8.28 0.00 40.74 3.86
3184 10277 1.668101 ATCGGCTCCGTCTTCTCCAC 61.668 60.000 8.28 0.00 40.74 4.02
3185 10278 2.182030 GGCTCCGTCTTCTCCACG 59.818 66.667 0.00 0.00 36.99 4.94
3186 10279 2.507324 GCTCCGTCTTCTCCACGC 60.507 66.667 0.00 0.00 35.87 5.34
3187 10280 2.182030 CTCCGTCTTCTCCACGCC 59.818 66.667 0.00 0.00 35.87 5.68
3188 10281 3.685214 CTCCGTCTTCTCCACGCCG 62.685 68.421 0.00 0.00 35.87 6.46
3217 10310 4.681978 GCTTGGGCGTGACCTCGT 62.682 66.667 0.00 0.00 39.10 4.18
3219 10312 1.153823 CTTGGGCGTGACCTCGTAG 60.154 63.158 0.00 0.00 39.10 3.51
3220 10313 1.874345 CTTGGGCGTGACCTCGTAGT 61.874 60.000 0.00 0.00 39.10 2.73
3221 10314 1.870055 TTGGGCGTGACCTCGTAGTC 61.870 60.000 0.00 1.35 39.10 2.59
3222 10315 2.488820 GGCGTGACCTCGTAGTCC 59.511 66.667 5.37 0.00 35.83 3.85
3223 10316 2.338015 GGCGTGACCTCGTAGTCCA 61.338 63.158 5.37 0.00 35.83 4.02
3225 10318 1.859427 GCGTGACCTCGTAGTCCACA 61.859 60.000 5.37 0.00 35.83 4.17
3226 10319 0.109873 CGTGACCTCGTAGTCCACAC 60.110 60.000 5.37 0.00 35.83 3.82
3227 10320 0.243095 GTGACCTCGTAGTCCACACC 59.757 60.000 5.37 0.00 35.83 4.16
3228 10321 1.239296 TGACCTCGTAGTCCACACCG 61.239 60.000 5.37 0.00 35.83 4.94
3229 10322 2.181021 CCTCGTAGTCCACACCGC 59.819 66.667 0.00 0.00 0.00 5.68
3230 10323 2.202440 CTCGTAGTCCACACCGCG 60.202 66.667 0.00 0.00 0.00 6.46
3231 10324 3.678717 CTCGTAGTCCACACCGCGG 62.679 68.421 26.86 26.86 0.00 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.021968 GCAAAGGGGTACGCCAATAG 58.978 55.000 28.77 16.63 44.92 1.73
13 14 0.394625 GGCAAAGGGGTACGCCAATA 60.395 55.000 28.77 0.00 44.25 1.90
14 15 1.680989 GGCAAAGGGGTACGCCAAT 60.681 57.895 28.77 15.52 44.25 3.16
15 16 2.282603 GGCAAAGGGGTACGCCAA 60.283 61.111 28.77 0.00 44.25 4.52
17 18 2.750237 CTGGCAAAGGGGTACGCC 60.750 66.667 20.94 20.94 44.92 5.68
18 19 2.750237 CCTGGCAAAGGGGTACGC 60.750 66.667 0.29 0.29 43.15 4.42
26 27 0.677731 TCTTCCGCATCCTGGCAAAG 60.678 55.000 0.00 0.00 0.00 2.77
27 28 0.034186 ATCTTCCGCATCCTGGCAAA 60.034 50.000 0.00 0.00 0.00 3.68
28 29 0.464373 GATCTTCCGCATCCTGGCAA 60.464 55.000 0.00 0.00 0.00 4.52
29 30 1.146930 GATCTTCCGCATCCTGGCA 59.853 57.895 0.00 0.00 0.00 4.92
30 31 1.146930 TGATCTTCCGCATCCTGGC 59.853 57.895 0.00 0.00 0.00 4.85
31 32 0.178767 TGTGATCTTCCGCATCCTGG 59.821 55.000 0.00 0.00 0.00 4.45
32 33 2.251409 ATGTGATCTTCCGCATCCTG 57.749 50.000 0.00 0.00 32.31 3.86
33 34 2.171237 TCAATGTGATCTTCCGCATCCT 59.829 45.455 0.00 0.00 36.37 3.24
34 35 2.564771 TCAATGTGATCTTCCGCATCC 58.435 47.619 0.00 0.00 36.37 3.51
55 56 2.933401 TTTCGCCCGATCACCGTGA 61.933 57.895 3.10 3.10 36.31 4.35
56 57 2.433491 TTTCGCCCGATCACCGTG 60.433 61.111 0.00 0.00 36.31 4.94
58 59 2.125673 AGTTTCGCCCGATCACCG 60.126 61.111 0.00 0.00 38.18 4.94
59 60 2.106683 CCAGTTTCGCCCGATCACC 61.107 63.158 0.00 0.00 0.00 4.02
60 61 2.750888 GCCAGTTTCGCCCGATCAC 61.751 63.158 0.00 0.00 0.00 3.06
61 62 2.435938 GCCAGTTTCGCCCGATCA 60.436 61.111 0.00 0.00 0.00 2.92
62 63 3.564027 CGCCAGTTTCGCCCGATC 61.564 66.667 0.00 0.00 0.00 3.69
66 67 3.508840 CATCCGCCAGTTTCGCCC 61.509 66.667 0.00 0.00 0.00 6.13
67 68 2.746277 ACATCCGCCAGTTTCGCC 60.746 61.111 0.00 0.00 0.00 5.54
68 69 2.750888 GGACATCCGCCAGTTTCGC 61.751 63.158 0.00 0.00 0.00 4.70
69 70 3.486263 GGACATCCGCCAGTTTCG 58.514 61.111 0.00 0.00 0.00 3.46
79 80 3.866582 CTGGGGCCTCGGACATCC 61.867 72.222 5.06 0.00 0.00 3.51
80 81 3.866582 CCTGGGGCCTCGGACATC 61.867 72.222 15.09 0.00 0.00 3.06
81 82 3.943137 TTCCTGGGGCCTCGGACAT 62.943 63.158 15.09 0.00 0.00 3.06
82 83 4.649705 TTCCTGGGGCCTCGGACA 62.650 66.667 15.09 3.87 0.00 4.02
83 84 4.097361 GTTCCTGGGGCCTCGGAC 62.097 72.222 15.09 0.00 0.00 4.79
86 87 3.330720 AAGGTTCCTGGGGCCTCG 61.331 66.667 0.84 0.00 0.00 4.63
87 88 2.356667 CAAGGTTCCTGGGGCCTC 59.643 66.667 0.84 0.00 0.00 4.70
88 89 3.268032 CCAAGGTTCCTGGGGCCT 61.268 66.667 0.84 4.49 0.00 5.19
100 101 0.323725 CATCACCCTCAACCCCAAGG 60.324 60.000 0.00 0.00 40.04 3.61
101 102 0.698238 TCATCACCCTCAACCCCAAG 59.302 55.000 0.00 0.00 0.00 3.61
102 103 1.284785 GATCATCACCCTCAACCCCAA 59.715 52.381 0.00 0.00 0.00 4.12
103 104 0.918983 GATCATCACCCTCAACCCCA 59.081 55.000 0.00 0.00 0.00 4.96
104 105 0.183731 GGATCATCACCCTCAACCCC 59.816 60.000 0.00 0.00 0.00 4.95
105 106 0.183731 GGGATCATCACCCTCAACCC 59.816 60.000 0.00 0.00 43.65 4.11
106 107 0.179045 CGGGATCATCACCCTCAACC 60.179 60.000 0.00 0.00 44.72 3.77
107 108 0.541863 ACGGGATCATCACCCTCAAC 59.458 55.000 0.00 0.00 44.72 3.18
108 109 2.039418 CTACGGGATCATCACCCTCAA 58.961 52.381 0.00 0.00 44.72 3.02
109 110 1.063190 ACTACGGGATCATCACCCTCA 60.063 52.381 0.00 0.00 44.72 3.86
111 112 2.176247 AACTACGGGATCATCACCCT 57.824 50.000 0.00 0.00 44.72 4.34
113 114 3.391049 GCTTAACTACGGGATCATCACC 58.609 50.000 0.00 0.00 0.00 4.02
114 115 3.391049 GGCTTAACTACGGGATCATCAC 58.609 50.000 0.00 0.00 0.00 3.06
115 116 2.035449 CGGCTTAACTACGGGATCATCA 59.965 50.000 0.00 0.00 0.00 3.07
116 117 2.609737 CCGGCTTAACTACGGGATCATC 60.610 54.545 0.00 0.00 43.69 2.92
117 118 1.343465 CCGGCTTAACTACGGGATCAT 59.657 52.381 0.00 0.00 43.69 2.45
119 120 3.582743 CCGGCTTAACTACGGGATC 57.417 57.895 0.00 0.00 43.69 3.36
123 124 0.247185 TTGACCCGGCTTAACTACGG 59.753 55.000 0.00 0.00 46.79 4.02
124 125 1.067354 ACTTGACCCGGCTTAACTACG 60.067 52.381 0.00 0.00 0.00 3.51
125 126 2.028748 TGACTTGACCCGGCTTAACTAC 60.029 50.000 0.00 0.00 0.00 2.73
127 128 1.053424 TGACTTGACCCGGCTTAACT 58.947 50.000 0.00 0.00 0.00 2.24
128 129 1.886886 TTGACTTGACCCGGCTTAAC 58.113 50.000 0.00 0.00 0.00 2.01
130 131 1.339631 CCATTGACTTGACCCGGCTTA 60.340 52.381 0.00 0.00 0.00 3.09
131 132 0.609131 CCATTGACTTGACCCGGCTT 60.609 55.000 0.00 0.00 0.00 4.35
133 134 1.002624 TCCATTGACTTGACCCGGC 60.003 57.895 0.00 0.00 0.00 6.13
134 135 1.026718 GCTCCATTGACTTGACCCGG 61.027 60.000 0.00 0.00 0.00 5.73
135 136 1.026718 GGCTCCATTGACTTGACCCG 61.027 60.000 0.00 0.00 0.00 5.28
136 137 0.329596 AGGCTCCATTGACTTGACCC 59.670 55.000 0.00 0.00 0.00 4.46
137 138 2.633488 GTAGGCTCCATTGACTTGACC 58.367 52.381 0.00 0.00 0.00 4.02
138 139 2.271800 CGTAGGCTCCATTGACTTGAC 58.728 52.381 0.00 0.00 0.00 3.18
139 140 1.899814 ACGTAGGCTCCATTGACTTGA 59.100 47.619 0.00 0.00 0.00 3.02
140 141 2.386661 ACGTAGGCTCCATTGACTTG 57.613 50.000 0.00 0.00 0.00 3.16
142 143 3.014304 TCTACGTAGGCTCCATTGACT 57.986 47.619 22.01 0.00 0.00 3.41
143 144 3.130693 AGTTCTACGTAGGCTCCATTGAC 59.869 47.826 22.01 7.53 0.00 3.18
144 145 3.362706 AGTTCTACGTAGGCTCCATTGA 58.637 45.455 22.01 0.00 0.00 2.57
147 148 1.948145 CGAGTTCTACGTAGGCTCCAT 59.052 52.381 26.85 10.91 0.00 3.41
148 149 1.339438 ACGAGTTCTACGTAGGCTCCA 60.339 52.381 26.85 8.95 42.17 3.86
149 150 1.330213 GACGAGTTCTACGTAGGCTCC 59.670 57.143 26.85 17.53 43.97 4.70
150 151 1.005137 CGACGAGTTCTACGTAGGCTC 60.005 57.143 24.97 24.97 43.97 4.70
151 152 1.005340 CGACGAGTTCTACGTAGGCT 58.995 55.000 22.01 18.94 43.97 4.58
152 153 1.002366 TCGACGAGTTCTACGTAGGC 58.998 55.000 22.01 14.85 43.97 3.93
153 154 2.926200 TCTTCGACGAGTTCTACGTAGG 59.074 50.000 22.01 8.37 43.97 3.18
154 155 3.856521 TCTCTTCGACGAGTTCTACGTAG 59.143 47.826 16.73 16.73 43.97 3.51
155 156 3.838120 TCTCTTCGACGAGTTCTACGTA 58.162 45.455 17.45 0.00 43.97 3.57
156 157 2.667481 CTCTCTTCGACGAGTTCTACGT 59.333 50.000 17.45 0.00 46.58 3.57
157 158 2.535335 GCTCTCTTCGACGAGTTCTACG 60.535 54.545 17.45 0.00 32.83 3.51
158 159 2.223089 GGCTCTCTTCGACGAGTTCTAC 60.223 54.545 17.45 5.21 32.83 2.59
159 160 2.008329 GGCTCTCTTCGACGAGTTCTA 58.992 52.381 17.45 0.00 32.83 2.10
160 161 0.806241 GGCTCTCTTCGACGAGTTCT 59.194 55.000 17.45 0.00 32.83 3.01
161 162 0.522180 TGGCTCTCTTCGACGAGTTC 59.478 55.000 17.45 10.64 32.83 3.01
162 163 1.133407 GATGGCTCTCTTCGACGAGTT 59.867 52.381 17.45 0.93 32.83 3.01
163 164 0.736053 GATGGCTCTCTTCGACGAGT 59.264 55.000 17.45 0.00 32.83 4.18
164 165 0.735471 TGATGGCTCTCTTCGACGAG 59.265 55.000 12.50 12.50 0.00 4.18
165 166 0.452184 GTGATGGCTCTCTTCGACGA 59.548 55.000 0.00 0.00 0.00 4.20
166 167 0.453793 AGTGATGGCTCTCTTCGACG 59.546 55.000 0.00 0.00 0.00 5.12
167 168 2.535331 GAAGTGATGGCTCTCTTCGAC 58.465 52.381 10.66 0.00 40.32 4.20
170 171 2.235898 ACCTGAAGTGATGGCTCTCTTC 59.764 50.000 15.56 15.56 45.69 2.87
171 172 2.264455 ACCTGAAGTGATGGCTCTCTT 58.736 47.619 0.00 0.00 37.79 2.85
172 173 1.949799 ACCTGAAGTGATGGCTCTCT 58.050 50.000 0.00 0.00 0.00 3.10
174 175 2.373169 TCAAACCTGAAGTGATGGCTCT 59.627 45.455 0.00 0.00 0.00 4.09
175 176 2.783135 TCAAACCTGAAGTGATGGCTC 58.217 47.619 0.00 0.00 0.00 4.70
176 177 2.957402 TCAAACCTGAAGTGATGGCT 57.043 45.000 0.00 0.00 0.00 4.75
177 178 3.084039 TCATCAAACCTGAAGTGATGGC 58.916 45.455 11.74 0.00 45.67 4.40
178 179 4.074259 TGTCATCAAACCTGAAGTGATGG 58.926 43.478 11.74 0.00 45.67 3.51
182 183 3.499918 GGAGTGTCATCAAACCTGAAGTG 59.500 47.826 0.00 0.00 34.49 3.16
183 184 3.136443 TGGAGTGTCATCAAACCTGAAGT 59.864 43.478 0.00 0.00 34.49 3.01
184 185 3.743521 TGGAGTGTCATCAAACCTGAAG 58.256 45.455 0.00 0.00 34.49 3.02
185 186 3.390967 TCTGGAGTGTCATCAAACCTGAA 59.609 43.478 0.00 0.00 34.49 3.02
186 187 2.972021 TCTGGAGTGTCATCAAACCTGA 59.028 45.455 0.00 0.00 35.56 3.86
187 188 3.407424 TCTGGAGTGTCATCAAACCTG 57.593 47.619 0.00 0.00 0.00 4.00
188 189 3.744660 GTTCTGGAGTGTCATCAAACCT 58.255 45.455 0.00 0.00 0.00 3.50
189 190 2.480419 CGTTCTGGAGTGTCATCAAACC 59.520 50.000 0.00 0.00 0.00 3.27
190 191 3.131396 ACGTTCTGGAGTGTCATCAAAC 58.869 45.455 0.00 0.00 0.00 2.93
191 192 3.069586 AGACGTTCTGGAGTGTCATCAAA 59.930 43.478 0.00 0.00 33.83 2.69
192 193 2.628178 AGACGTTCTGGAGTGTCATCAA 59.372 45.455 0.00 0.00 33.83 2.57
194 195 2.600731 CAGACGTTCTGGAGTGTCATC 58.399 52.381 0.00 0.00 40.71 2.92
195 196 2.732412 CAGACGTTCTGGAGTGTCAT 57.268 50.000 0.00 0.00 40.71 3.06
204 205 3.491267 GTGAAGTTCTTCCAGACGTTCTG 59.509 47.826 4.17 7.72 43.91 3.02
206 207 2.801111 GGTGAAGTTCTTCCAGACGTTC 59.199 50.000 4.17 0.00 0.00 3.95
207 208 2.802057 CGGTGAAGTTCTTCCAGACGTT 60.802 50.000 4.17 0.00 0.00 3.99
208 209 1.269621 CGGTGAAGTTCTTCCAGACGT 60.270 52.381 4.17 0.00 0.00 4.34
209 210 1.419374 CGGTGAAGTTCTTCCAGACG 58.581 55.000 4.17 5.78 0.00 4.18
210 211 1.608283 CCCGGTGAAGTTCTTCCAGAC 60.608 57.143 0.00 2.48 0.00 3.51
211 212 0.685097 CCCGGTGAAGTTCTTCCAGA 59.315 55.000 0.00 0.00 0.00 3.86
212 213 0.685097 TCCCGGTGAAGTTCTTCCAG 59.315 55.000 0.00 0.00 0.00 3.86
214 215 0.036294 CCTCCCGGTGAAGTTCTTCC 60.036 60.000 0.00 6.08 0.00 3.46
215 216 0.673956 GCCTCCCGGTGAAGTTCTTC 60.674 60.000 0.00 5.70 0.00 2.87
216 217 1.128188 AGCCTCCCGGTGAAGTTCTT 61.128 55.000 0.00 0.00 0.00 2.52
217 218 1.536662 AGCCTCCCGGTGAAGTTCT 60.537 57.895 0.00 0.00 0.00 3.01
218 219 1.376037 CAGCCTCCCGGTGAAGTTC 60.376 63.158 0.00 0.00 42.92 3.01
220 221 2.526873 ACAGCCTCCCGGTGAAGT 60.527 61.111 0.00 0.00 42.92 3.01
221 222 2.266055 GACAGCCTCCCGGTGAAG 59.734 66.667 0.00 0.00 42.92 3.02
222 223 3.319198 GGACAGCCTCCCGGTGAA 61.319 66.667 0.00 0.00 42.92 3.18
244 245 2.925162 GAATCCGACTTCCGCCCCAG 62.925 65.000 0.00 0.00 36.84 4.45
245 246 3.006728 AATCCGACTTCCGCCCCA 61.007 61.111 0.00 0.00 36.84 4.96
246 247 2.203029 GAATCCGACTTCCGCCCC 60.203 66.667 0.00 0.00 36.84 5.80
247 248 1.146263 ATGAATCCGACTTCCGCCC 59.854 57.895 0.00 0.00 36.84 6.13
248 249 1.776034 GCATGAATCCGACTTCCGCC 61.776 60.000 0.00 0.00 36.84 6.13
249 250 1.643832 GCATGAATCCGACTTCCGC 59.356 57.895 0.00 0.00 36.84 5.54
251 252 0.181350 AGGGCATGAATCCGACTTCC 59.819 55.000 0.00 0.00 0.00 3.46
252 253 1.672881 CAAGGGCATGAATCCGACTTC 59.327 52.381 0.00 0.00 0.00 3.01
253 254 1.281867 TCAAGGGCATGAATCCGACTT 59.718 47.619 0.00 0.00 0.00 3.01
254 255 0.911769 TCAAGGGCATGAATCCGACT 59.088 50.000 0.00 0.00 0.00 4.18
255 256 1.605710 CATCAAGGGCATGAATCCGAC 59.394 52.381 0.00 0.00 32.06 4.79
256 257 1.477377 CCATCAAGGGCATGAATCCGA 60.477 52.381 0.00 0.00 32.06 4.55
257 258 0.956633 CCATCAAGGGCATGAATCCG 59.043 55.000 0.00 0.00 32.06 4.18
268 269 0.549950 AGTCTGGATGGCCATCAAGG 59.450 55.000 38.69 28.60 44.91 3.61
269 270 2.295885 GAAGTCTGGATGGCCATCAAG 58.704 52.381 39.50 37.73 44.91 3.02
270 271 1.064463 GGAAGTCTGGATGGCCATCAA 60.064 52.381 39.50 31.58 44.91 2.57
272 273 0.842635 AGGAAGTCTGGATGGCCATC 59.157 55.000 33.90 33.90 44.91 3.51
273 274 0.842635 GAGGAAGTCTGGATGGCCAT 59.157 55.000 20.96 20.96 44.91 4.40
274 275 0.252881 AGAGGAAGTCTGGATGGCCA 60.253 55.000 8.56 8.56 43.47 5.36
275 276 0.915364 AAGAGGAAGTCTGGATGGCC 59.085 55.000 0.00 0.00 34.84 5.36
276 277 1.134250 GGAAGAGGAAGTCTGGATGGC 60.134 57.143 0.00 0.00 34.84 4.40
277 278 1.137872 CGGAAGAGGAAGTCTGGATGG 59.862 57.143 0.00 0.00 34.84 3.51
278 279 2.103373 TCGGAAGAGGAAGTCTGGATG 58.897 52.381 0.00 0.00 34.84 3.51
292 293 1.004918 ACGGCCTTGTTCTCGGAAG 60.005 57.895 0.00 0.00 0.00 3.46
293 294 1.301401 CACGGCCTTGTTCTCGGAA 60.301 57.895 0.00 0.00 0.00 4.30
294 295 2.154798 CTCACGGCCTTGTTCTCGGA 62.155 60.000 9.36 0.00 0.00 4.55
296 297 1.738099 CCTCACGGCCTTGTTCTCG 60.738 63.158 9.36 0.00 0.00 4.04
297 298 1.376037 CCCTCACGGCCTTGTTCTC 60.376 63.158 9.36 0.00 0.00 2.87
298 299 2.750350 CCCTCACGGCCTTGTTCT 59.250 61.111 9.36 0.00 0.00 3.01
318 319 3.499737 CATGGTGGCCGAGAACGC 61.500 66.667 0.00 0.00 38.29 4.84
319 320 1.153369 ATCATGGTGGCCGAGAACG 60.153 57.895 0.00 0.00 39.43 3.95
320 321 1.718757 GCATCATGGTGGCCGAGAAC 61.719 60.000 8.33 0.00 0.00 3.01
322 323 2.190313 GCATCATGGTGGCCGAGA 59.810 61.111 8.33 0.00 0.00 4.04
323 324 3.274586 CGCATCATGGTGGCCGAG 61.275 66.667 8.33 0.00 0.00 4.63
326 327 3.896133 CAGCGCATCATGGTGGCC 61.896 66.667 11.47 0.00 0.00 5.36
327 328 3.896133 CCAGCGCATCATGGTGGC 61.896 66.667 11.47 9.57 46.72 5.01
331 332 1.430632 GAACACCAGCGCATCATGG 59.569 57.895 11.47 11.53 42.60 3.66
332 333 1.061411 CGAACACCAGCGCATCATG 59.939 57.895 11.47 4.64 0.00 3.07
334 335 2.741985 CCGAACACCAGCGCATCA 60.742 61.111 11.47 0.00 0.00 3.07
335 336 4.166011 GCCGAACACCAGCGCATC 62.166 66.667 11.47 0.00 0.00 3.91
340 341 0.963355 TATTTGGGCCGAACACCAGC 60.963 55.000 8.77 0.00 38.16 4.85
343 344 0.661020 CGATATTTGGGCCGAACACC 59.339 55.000 8.77 0.00 0.00 4.16
344 345 0.661020 CCGATATTTGGGCCGAACAC 59.339 55.000 8.77 2.52 0.00 3.32
345 346 0.464735 CCCGATATTTGGGCCGAACA 60.465 55.000 8.77 0.00 40.47 3.18
346 347 1.170290 CCCCGATATTTGGGCCGAAC 61.170 60.000 8.77 0.00 45.95 3.95
347 348 1.149627 CCCCGATATTTGGGCCGAA 59.850 57.895 9.06 9.06 45.95 4.30
348 349 2.824880 CCCCCGATATTTGGGCCGA 61.825 63.158 8.19 0.00 45.95 5.54
349 350 2.282180 CCCCCGATATTTGGGCCG 60.282 66.667 8.19 0.00 45.95 6.13
350 351 1.228459 GACCCCCGATATTTGGGCC 60.228 63.158 8.19 0.00 45.95 5.80
351 352 0.185175 AAGACCCCCGATATTTGGGC 59.815 55.000 8.19 0.00 45.95 5.36
353 354 1.133792 AGCAAGACCCCCGATATTTGG 60.134 52.381 0.00 0.00 0.00 3.28
354 355 2.348411 AGCAAGACCCCCGATATTTG 57.652 50.000 0.00 0.00 0.00 2.32
358 359 3.714798 AGATTTTAGCAAGACCCCCGATA 59.285 43.478 0.00 0.00 0.00 2.92
359 360 2.509964 AGATTTTAGCAAGACCCCCGAT 59.490 45.455 0.00 0.00 0.00 4.18
360 361 1.913419 AGATTTTAGCAAGACCCCCGA 59.087 47.619 0.00 0.00 0.00 5.14
361 362 2.420058 AGATTTTAGCAAGACCCCCG 57.580 50.000 0.00 0.00 0.00 5.73
362 363 2.760650 CCAAGATTTTAGCAAGACCCCC 59.239 50.000 0.00 0.00 0.00 5.40
364 365 4.809673 CAACCAAGATTTTAGCAAGACCC 58.190 43.478 0.00 0.00 0.00 4.46
365 366 4.021981 AGCAACCAAGATTTTAGCAAGACC 60.022 41.667 0.00 0.00 0.00 3.85
379 380 6.258727 CAGTATAATAGTCCACAGCAACCAAG 59.741 42.308 0.00 0.00 0.00 3.61
388 389 8.531982 GGATAGCATTCAGTATAATAGTCCACA 58.468 37.037 0.00 0.00 0.00 4.17
389 390 8.754080 AGGATAGCATTCAGTATAATAGTCCAC 58.246 37.037 0.00 0.00 0.00 4.02
399 400 9.284131 TCCCAATTATAGGATAGCATTCAGTAT 57.716 33.333 0.00 0.00 0.00 2.12
402 403 8.105829 AGTTCCCAATTATAGGATAGCATTCAG 58.894 37.037 0.00 0.00 30.55 3.02
403 404 7.988937 AGTTCCCAATTATAGGATAGCATTCA 58.011 34.615 0.00 0.00 30.55 2.57
404 405 8.325046 AGAGTTCCCAATTATAGGATAGCATTC 58.675 37.037 0.00 0.00 30.55 2.67
406 407 7.821134 AGAGTTCCCAATTATAGGATAGCAT 57.179 36.000 0.00 0.00 30.55 3.79
407 408 7.514127 AGAAGAGTTCCCAATTATAGGATAGCA 59.486 37.037 0.00 0.00 30.55 3.49
408 409 7.912719 AGAAGAGTTCCCAATTATAGGATAGC 58.087 38.462 0.00 0.00 30.55 2.97
413 5103 8.317679 CCTATGAGAAGAGTTCCCAATTATAGG 58.682 40.741 0.00 0.00 0.00 2.57
417 5107 5.163195 GCCCTATGAGAAGAGTTCCCAATTA 60.163 44.000 0.00 0.00 0.00 1.40
451 5141 3.290710 GCTCTGGGCAAAGATTTGGATA 58.709 45.455 7.38 0.00 41.35 2.59
541 5231 6.769512 ACCAGTGAAAAGAGCAATAGTTCTA 58.230 36.000 0.00 0.00 33.87 2.10
575 5271 3.118408 TGCGGCCTCTTCACTAATAACAT 60.118 43.478 0.00 0.00 0.00 2.71
639 5339 9.428097 GGAATTCAAATCAAAGTTAGCTGAAAT 57.572 29.630 7.93 0.00 0.00 2.17
721 5422 5.150342 TCAATCAATATACAACGGTTGCG 57.850 39.130 20.20 0.00 0.00 4.85
881 5587 8.693504 CATCAACAACATGTCATTAGAAACAAC 58.306 33.333 0.00 0.00 0.00 3.32
891 5604 6.578163 TTGATCACATCAACAACATGTCAT 57.422 33.333 0.00 0.00 43.84 3.06
960 5677 8.143835 ACCTACAAAGAATCCAAAATGAGTTTG 58.856 33.333 0.00 0.00 45.36 2.93
1029 5747 1.180029 CTCCTTGGACTGCCCATTTG 58.820 55.000 0.00 0.00 46.10 2.32
1037 5755 0.036875 GTGGGTTCCTCCTTGGACTG 59.963 60.000 0.00 0.00 46.14 3.51
1084 6126 7.785033 ACATCAGAACTCAAAGTTTGGAATTT 58.215 30.769 15.47 4.09 38.80 1.82
1351 6418 7.505585 TCCCTCAACTGTAAAGTTTGATTGAAT 59.494 33.333 0.00 0.00 0.00 2.57
1526 6595 2.651382 TGCTGGCTGATAGCATCAAT 57.349 45.000 2.99 0.00 45.52 2.57
1659 6728 2.016318 CCACTCTTTATGCAATGCCGA 58.984 47.619 1.53 0.00 0.00 5.54
1660 6729 1.534595 GCCACTCTTTATGCAATGCCG 60.535 52.381 1.53 0.00 0.00 5.69
1676 6745 0.521242 CGCGTGCTTTATCTTGCCAC 60.521 55.000 0.00 0.00 0.00 5.01
1685 6754 1.337354 TGGACTTCATCGCGTGCTTTA 60.337 47.619 5.77 0.00 0.00 1.85
1768 6879 9.636789 TGTTCCAATGAGATATCATTCAGAATT 57.363 29.630 20.00 0.00 38.16 2.17
1774 6885 8.843262 TCACAATGTTCCAATGAGATATCATTC 58.157 33.333 12.58 2.94 38.16 2.67
1775 6886 8.756486 TCACAATGTTCCAATGAGATATCATT 57.244 30.769 9.77 9.77 40.59 2.57
1816 6939 9.159364 CACCATATTTACCTGATATCATGTCAG 57.841 37.037 15.83 4.41 42.11 3.51
1819 6942 7.609146 CAGCACCATATTTACCTGATATCATGT 59.391 37.037 16.47 16.47 0.00 3.21
1992 7122 0.811219 CGAATTCCTCCGCATCAGCA 60.811 55.000 0.00 0.00 42.27 4.41
1996 7126 1.433534 GGATCGAATTCCTCCGCATC 58.566 55.000 0.00 0.00 32.68 3.91
2033 7164 0.461961 GCCGAGGTGATAGCTCTTGT 59.538 55.000 0.00 0.00 40.38 3.16
2101 7232 1.203052 CTTTGCCTCAACCATCGCAAT 59.797 47.619 0.00 0.00 40.63 3.56
2260 7664 7.124573 ACTTAGCATGTTGTCCATATACAGA 57.875 36.000 0.00 0.00 30.71 3.41
2316 8375 1.301322 TTGCTCGCAATCCACACGA 60.301 52.632 0.00 0.00 0.00 4.35
2346 8405 0.321298 TCAGACAAGTTAAGCGCCCC 60.321 55.000 2.29 0.00 0.00 5.80
2575 8699 1.825090 TGATGTGGTTGAGATGTGGC 58.175 50.000 0.00 0.00 0.00 5.01
2584 8708 2.415893 GCGGGAAGATTTGATGTGGTTG 60.416 50.000 0.00 0.00 0.00 3.77
2629 9239 2.479340 GTAGGAGAGGGGGCTAAACTT 58.521 52.381 0.00 0.00 0.00 2.66
2662 9274 0.108019 GTCAAGGACCGAGGGTTTGT 59.892 55.000 0.00 0.00 35.25 2.83
2666 9278 0.841289 TTTTGTCAAGGACCGAGGGT 59.159 50.000 0.00 0.00 39.44 4.34
2733 9377 2.530958 TTTCCGGTCAATCTCCGCCC 62.531 60.000 0.00 0.00 45.71 6.13
2735 9379 0.108329 TCTTTCCGGTCAATCTCCGC 60.108 55.000 0.00 0.00 45.71 5.54
2749 9393 5.124617 GTGGGTCTCTTCCATTGATTCTTTC 59.875 44.000 0.00 0.00 36.58 2.62
2791 9435 1.537202 CTCAGCGAACCAAGAAAAGGG 59.463 52.381 0.00 0.00 0.00 3.95
2794 9438 2.218603 GGACTCAGCGAACCAAGAAAA 58.781 47.619 0.00 0.00 0.00 2.29
2801 9445 2.094182 TCTAACATGGACTCAGCGAACC 60.094 50.000 0.00 0.00 0.00 3.62
2837 9481 9.905171 TTGTGTTACAATACGTACATAAGTACA 57.095 29.630 8.82 3.51 40.77 2.90
2839 9483 9.352784 GGTTGTGTTACAATACGTACATAAGTA 57.647 33.333 0.00 0.00 40.59 2.24
2840 9484 7.871973 TGGTTGTGTTACAATACGTACATAAGT 59.128 33.333 0.00 0.00 40.59 2.24
2841 9485 8.242085 TGGTTGTGTTACAATACGTACATAAG 57.758 34.615 0.00 0.00 40.59 1.73
2842 9486 8.774890 ATGGTTGTGTTACAATACGTACATAA 57.225 30.769 0.00 0.00 40.59 1.90
2843 9487 8.774890 AATGGTTGTGTTACAATACGTACATA 57.225 30.769 0.00 0.00 40.59 2.29
2844 9488 7.675962 AATGGTTGTGTTACAATACGTACAT 57.324 32.000 0.00 0.00 40.59 2.29
2845 9489 8.774890 ATAATGGTTGTGTTACAATACGTACA 57.225 30.769 0.00 0.00 40.59 2.90
2867 9511 9.744125 AGGGGTGGCTTATCTCATTATATATAA 57.256 33.333 7.62 7.62 0.00 0.98
2869 9513 9.386122 CTAGGGGTGGCTTATCTCATTATATAT 57.614 37.037 0.00 0.00 0.00 0.86
2870 9514 8.574853 TCTAGGGGTGGCTTATCTCATTATATA 58.425 37.037 0.00 0.00 0.00 0.86
2871 9515 7.430844 TCTAGGGGTGGCTTATCTCATTATAT 58.569 38.462 0.00 0.00 0.00 0.86
2872 9516 6.811574 TCTAGGGGTGGCTTATCTCATTATA 58.188 40.000 0.00 0.00 0.00 0.98
2873 9517 5.665701 TCTAGGGGTGGCTTATCTCATTAT 58.334 41.667 0.00 0.00 0.00 1.28
2874 9518 5.087323 CTCTAGGGGTGGCTTATCTCATTA 58.913 45.833 0.00 0.00 0.00 1.90
2875 9519 3.906846 CTCTAGGGGTGGCTTATCTCATT 59.093 47.826 0.00 0.00 0.00 2.57
2876 9520 3.515562 CTCTAGGGGTGGCTTATCTCAT 58.484 50.000 0.00 0.00 0.00 2.90
2877 9521 2.426414 CCTCTAGGGGTGGCTTATCTCA 60.426 54.545 0.00 0.00 0.00 3.27
2878 9522 2.252714 CCTCTAGGGGTGGCTTATCTC 58.747 57.143 0.00 0.00 0.00 2.75
2879 9523 2.407340 CCTCTAGGGGTGGCTTATCT 57.593 55.000 0.00 0.00 0.00 1.98
2891 9535 2.420687 GGAATCAGCACAACCCTCTAGG 60.421 54.545 0.00 0.00 43.78 3.02
2892 9536 2.420687 GGGAATCAGCACAACCCTCTAG 60.421 54.545 0.00 0.00 37.75 2.43
2893 9537 1.559682 GGGAATCAGCACAACCCTCTA 59.440 52.381 0.00 0.00 37.75 2.43
2894 9538 0.329596 GGGAATCAGCACAACCCTCT 59.670 55.000 0.00 0.00 37.75 3.69
2895 9539 0.681243 GGGGAATCAGCACAACCCTC 60.681 60.000 0.00 0.00 40.31 4.30
2896 9540 1.384191 GGGGAATCAGCACAACCCT 59.616 57.895 0.00 0.00 40.31 4.34
2897 9541 0.541764 TTGGGGAATCAGCACAACCC 60.542 55.000 0.00 0.00 39.79 4.11
2898 9542 1.337118 TTTGGGGAATCAGCACAACC 58.663 50.000 0.00 0.00 0.00 3.77
2899 9543 3.683365 ATTTTGGGGAATCAGCACAAC 57.317 42.857 0.00 0.00 0.00 3.32
2900 9544 4.703379 AAATTTTGGGGAATCAGCACAA 57.297 36.364 0.00 0.00 0.00 3.33
2901 9545 6.171921 CAATAAATTTTGGGGAATCAGCACA 58.828 36.000 0.00 0.00 0.00 4.57
2902 9546 6.172630 ACAATAAATTTTGGGGAATCAGCAC 58.827 36.000 0.00 0.00 0.00 4.40
2903 9547 6.213195 AGACAATAAATTTTGGGGAATCAGCA 59.787 34.615 0.00 0.00 0.00 4.41
2904 9548 6.643388 AGACAATAAATTTTGGGGAATCAGC 58.357 36.000 0.00 0.00 0.00 4.26
2905 9549 9.586435 GTAAGACAATAAATTTTGGGGAATCAG 57.414 33.333 0.00 0.00 0.00 2.90
2906 9550 9.094578 TGTAAGACAATAAATTTTGGGGAATCA 57.905 29.630 0.00 0.00 0.00 2.57
2911 9555 7.619965 ACCATGTAAGACAATAAATTTTGGGG 58.380 34.615 0.00 0.00 0.00 4.96
2917 9561 8.342634 GCGTGATACCATGTAAGACAATAAATT 58.657 33.333 0.00 0.00 0.00 1.82
2919 9563 7.045416 AGCGTGATACCATGTAAGACAATAAA 58.955 34.615 0.00 0.00 0.00 1.40
2931 9575 3.004002 TCGTAACCTAGCGTGATACCATG 59.996 47.826 0.00 0.00 0.00 3.66
2935 9579 3.477122 CGATCGTAACCTAGCGTGATAC 58.523 50.000 7.03 0.00 0.00 2.24
2936 9580 2.096069 GCGATCGTAACCTAGCGTGATA 60.096 50.000 17.81 0.00 0.00 2.15
2937 9581 1.334779 GCGATCGTAACCTAGCGTGAT 60.335 52.381 17.81 0.00 0.00 3.06
2938 9582 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.000 17.81 0.00 0.00 4.35
2939 9583 0.029035 AGCGATCGTAACCTAGCGTG 59.971 55.000 17.81 0.00 0.00 5.34
2941 9585 1.396644 GAAGCGATCGTAACCTAGCG 58.603 55.000 17.81 0.00 0.00 4.26
2957 9601 5.055144 GGTATTAGGGTTTAGAAGCGGAAG 58.945 45.833 0.00 0.00 0.00 3.46
2958 9602 4.141642 GGGTATTAGGGTTTAGAAGCGGAA 60.142 45.833 0.00 0.00 0.00 4.30
2959 9603 3.389002 GGGTATTAGGGTTTAGAAGCGGA 59.611 47.826 0.00 0.00 0.00 5.54
2960 9604 3.736720 GGGTATTAGGGTTTAGAAGCGG 58.263 50.000 0.00 0.00 0.00 5.52
2961 9605 3.068590 TCGGGTATTAGGGTTTAGAAGCG 59.931 47.826 0.00 0.00 0.00 4.68
2962 9606 4.375272 GTCGGGTATTAGGGTTTAGAAGC 58.625 47.826 0.00 0.00 0.00 3.86
2963 9607 4.500375 CGGTCGGGTATTAGGGTTTAGAAG 60.500 50.000 0.00 0.00 0.00 2.85
2964 9608 3.384467 CGGTCGGGTATTAGGGTTTAGAA 59.616 47.826 0.00 0.00 0.00 2.10
2965 9609 2.958355 CGGTCGGGTATTAGGGTTTAGA 59.042 50.000 0.00 0.00 0.00 2.10
2966 9610 2.546584 GCGGTCGGGTATTAGGGTTTAG 60.547 54.545 0.00 0.00 0.00 1.85
2967 9611 1.412343 GCGGTCGGGTATTAGGGTTTA 59.588 52.381 0.00 0.00 0.00 2.01
2969 9613 1.689243 GGCGGTCGGGTATTAGGGTT 61.689 60.000 0.00 0.00 0.00 4.11
2970 9614 2.136229 GGCGGTCGGGTATTAGGGT 61.136 63.158 0.00 0.00 0.00 4.34
2971 9615 2.739132 GGCGGTCGGGTATTAGGG 59.261 66.667 0.00 0.00 0.00 3.53
2972 9616 2.337532 CGGCGGTCGGGTATTAGG 59.662 66.667 0.00 0.00 34.75 2.69
2973 9617 2.355481 GCGGCGGTCGGGTATTAG 60.355 66.667 9.78 0.00 39.69 1.73
2974 9618 3.915330 GGCGGCGGTCGGGTATTA 61.915 66.667 9.78 0.00 39.69 0.98
3057 10142 4.265056 AGTGGAACCGGTGGTGGC 62.265 66.667 8.52 0.00 37.80 5.01
3058 10143 2.281484 CAGTGGAACCGGTGGTGG 60.281 66.667 8.52 0.00 37.80 4.61
3059 10144 2.978010 GCAGTGGAACCGGTGGTG 60.978 66.667 8.52 2.41 37.80 4.17
3060 10145 3.168528 AGCAGTGGAACCGGTGGT 61.169 61.111 8.52 0.00 37.80 4.16
3063 10148 4.988598 CGCAGCAGTGGAACCGGT 62.989 66.667 0.00 0.00 37.80 5.28
3095 10180 1.519013 GAGCAGAGCCGCAAGAGAG 60.519 63.158 0.00 0.00 43.02 3.20
3096 10181 1.820010 TTGAGCAGAGCCGCAAGAGA 61.820 55.000 0.00 0.00 43.02 3.10
3098 10183 1.669115 GTTGAGCAGAGCCGCAAGA 60.669 57.895 0.00 0.00 43.02 3.02
3100 10185 2.669569 GGTTGAGCAGAGCCGCAA 60.670 61.111 0.00 0.00 0.00 4.85
3101 10186 3.596066 GAGGTTGAGCAGAGCCGCA 62.596 63.158 0.00 0.00 0.00 5.69
3102 10187 2.817396 GAGGTTGAGCAGAGCCGC 60.817 66.667 0.00 0.00 0.00 6.53
3103 10188 2.125350 GGAGGTTGAGCAGAGCCG 60.125 66.667 0.00 0.00 0.00 5.52
3104 10189 2.270527 GGGAGGTTGAGCAGAGCC 59.729 66.667 0.00 0.00 0.00 4.70
3105 10190 2.125350 CGGGAGGTTGAGCAGAGC 60.125 66.667 0.00 0.00 0.00 4.09
3106 10191 2.125350 GCGGGAGGTTGAGCAGAG 60.125 66.667 0.00 0.00 0.00 3.35
3107 10192 2.604686 AGCGGGAGGTTGAGCAGA 60.605 61.111 0.00 0.00 37.18 4.26
3108 10193 2.125350 GAGCGGGAGGTTGAGCAG 60.125 66.667 0.00 0.00 43.00 4.24
3109 10194 4.069232 CGAGCGGGAGGTTGAGCA 62.069 66.667 0.00 0.00 44.43 4.26
3113 10198 2.892425 GCATCGAGCGGGAGGTTG 60.892 66.667 0.00 0.00 43.00 3.77
3117 10202 4.933064 GACGGCATCGAGCGGGAG 62.933 72.222 15.12 4.89 46.82 4.30
3119 10204 4.933064 GAGACGGCATCGAGCGGG 62.933 72.222 15.12 7.01 46.82 6.13
3137 10230 4.925576 CCGATCGGAGCCGGAACG 62.926 72.222 30.62 6.00 46.16 3.95
3142 10235 3.774959 CTTGTCCCGATCGGAGCCG 62.775 68.421 35.42 18.37 43.19 5.52
3146 10239 2.423898 GCTCCTTGTCCCGATCGGA 61.424 63.158 35.42 18.23 38.83 4.55
3150 10243 1.443407 CGATGCTCCTTGTCCCGAT 59.557 57.895 0.00 0.00 0.00 4.18
3163 10256 1.590259 GAGAAGACGGAGCCGATGC 60.590 63.158 16.83 2.40 42.83 3.91
3164 10257 1.066587 GGAGAAGACGGAGCCGATG 59.933 63.158 16.83 0.00 42.83 3.84
3165 10258 1.379977 TGGAGAAGACGGAGCCGAT 60.380 57.895 16.83 0.54 42.83 4.18
3168 10261 2.182030 CGTGGAGAAGACGGAGCC 59.818 66.667 0.00 0.00 33.08 4.70
3169 10262 2.507324 GCGTGGAGAAGACGGAGC 60.507 66.667 0.00 0.00 37.30 4.70
3170 10263 2.182030 GGCGTGGAGAAGACGGAG 59.818 66.667 0.00 0.00 37.30 4.63
3171 10264 3.744719 CGGCGTGGAGAAGACGGA 61.745 66.667 0.00 0.00 37.30 4.69
3200 10293 3.291101 TACGAGGTCACGCCCAAGC 62.291 63.158 0.00 0.00 38.26 4.01
3203 10296 2.282674 ACTACGAGGTCACGCCCA 60.283 61.111 0.00 0.00 38.26 5.36
3204 10297 2.488820 GACTACGAGGTCACGCCC 59.511 66.667 0.00 0.00 38.26 6.13
3205 10298 2.338015 TGGACTACGAGGTCACGCC 61.338 63.158 12.63 0.00 37.91 5.68
3206 10299 1.154073 GTGGACTACGAGGTCACGC 60.154 63.158 12.63 6.76 37.91 5.34
3207 10300 0.109873 GTGTGGACTACGAGGTCACG 60.110 60.000 12.63 0.00 37.91 4.35
3209 10302 1.239296 CGGTGTGGACTACGAGGTCA 61.239 60.000 12.63 0.16 37.91 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.