Multiple sequence alignment - TraesCS1A01G250700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G250700 chr1A 100.000 3826 0 0 1 3826 442473348 442477173 0.000000e+00 7066.0
1 TraesCS1A01G250700 chr1A 100.000 84 0 0 3743 3826 525140801 525140884 5.120000e-34 156.0
2 TraesCS1A01G250700 chr1A 94.845 97 3 2 3731 3826 3675309 3675214 2.380000e-32 150.0
3 TraesCS1A01G250700 chr1A 97.333 75 2 0 2420 2494 320769575 320769501 1.120000e-25 128.0
4 TraesCS1A01G250700 chr1B 94.216 2455 100 14 1 2421 459812568 459815014 0.000000e+00 3709.0
5 TraesCS1A01G250700 chr1B 91.250 320 14 5 2605 2924 459815012 459815317 1.270000e-114 424.0
6 TraesCS1A01G250700 chr1D 94.269 2443 100 17 1 2421 342847793 342850217 0.000000e+00 3699.0
7 TraesCS1A01G250700 chr1D 89.934 457 22 11 2605 3061 342850215 342850647 5.550000e-158 568.0
8 TraesCS1A01G250700 chr1D 88.611 360 27 6 3249 3596 342852121 342852478 3.530000e-115 425.0
9 TraesCS1A01G250700 chr1D 96.581 117 4 0 2491 2607 27881774 27881890 1.080000e-45 195.0
10 TraesCS1A01G250700 chr1D 96.581 117 4 0 2491 2607 34643831 34643947 1.080000e-45 195.0
11 TraesCS1A01G250700 chr1D 87.425 167 12 4 3045 3211 342850663 342850820 2.350000e-42 183.0
12 TraesCS1A01G250700 chr1D 98.214 56 1 0 3136 3191 105352525 105352470 8.750000e-17 99.0
13 TraesCS1A01G250700 chr2A 89.305 187 19 1 2421 2607 721866658 721866843 2.300000e-57 233.0
14 TraesCS1A01G250700 chr2A 97.436 117 3 0 2491 2607 362446010 362445894 2.330000e-47 200.0
15 TraesCS1A01G250700 chr2A 95.789 95 2 2 3732 3826 644083300 644083392 6.620000e-33 152.0
16 TraesCS1A01G250700 chr2A 98.667 75 1 0 2421 2495 433415268 433415342 2.400000e-27 134.0
17 TraesCS1A01G250700 chr2A 96.104 77 3 0 2418 2494 53618820 53618744 4.010000e-25 126.0
18 TraesCS1A01G250700 chr2A 96.154 78 2 1 2418 2494 753568846 753568769 4.010000e-25 126.0
19 TraesCS1A01G250700 chr7D 97.436 117 3 0 2491 2607 31061957 31061841 2.330000e-47 200.0
20 TraesCS1A01G250700 chr2D 97.436 117 3 0 2491 2607 295166518 295166402 2.330000e-47 200.0
21 TraesCS1A01G250700 chr2D 96.581 117 4 0 2491 2607 305074740 305074856 1.080000e-45 195.0
22 TraesCS1A01G250700 chr2D 93.902 82 5 0 2413 2494 25754517 25754436 1.440000e-24 124.0
23 TraesCS1A01G250700 chr6B 96.581 117 4 0 2491 2607 523343762 523343878 1.080000e-45 195.0
24 TraesCS1A01G250700 chr6B 100.000 85 0 0 3742 3826 197767626 197767542 1.420000e-34 158.0
25 TraesCS1A01G250700 chr6B 97.753 89 1 1 3738 3826 88917217 88917304 6.620000e-33 152.0
26 TraesCS1A01G250700 chr4A 95.833 120 4 1 2491 2610 669647523 669647641 3.900000e-45 193.0
27 TraesCS1A01G250700 chr4A 96.104 77 3 0 2418 2494 14165408 14165332 4.010000e-25 126.0
28 TraesCS1A01G250700 chr4B 100.000 85 0 0 3742 3826 249050045 249050129 1.420000e-34 158.0
29 TraesCS1A01G250700 chr4B 100.000 84 0 0 3743 3826 516505978 516506061 5.120000e-34 156.0
30 TraesCS1A01G250700 chr3B 97.753 89 0 2 3738 3826 129725031 129724945 6.620000e-33 152.0
31 TraesCS1A01G250700 chr7B 95.789 95 0 3 3736 3826 245858343 245858249 2.380000e-32 150.0
32 TraesCS1A01G250700 chr7B 100.000 56 0 0 3136 3191 123782862 123782917 1.880000e-18 104.0
33 TraesCS1A01G250700 chr3A 93.976 83 5 0 2412 2494 659427956 659427874 4.010000e-25 126.0
34 TraesCS1A01G250700 chr3A 92.857 84 5 1 2420 2502 91031364 91031281 1.870000e-23 121.0
35 TraesCS1A01G250700 chr3A 100.000 54 0 0 3138 3191 599863804 599863751 2.430000e-17 100.0
36 TraesCS1A01G250700 chr3A 98.182 55 1 0 3137 3191 686191211 686191265 3.150000e-16 97.1
37 TraesCS1A01G250700 chr3A 90.278 72 6 1 3140 3210 518486780 518486709 4.070000e-15 93.5
38 TraesCS1A01G250700 chr4D 95.000 60 3 0 3132 3191 339060453 339060394 1.130000e-15 95.3
39 TraesCS1A01G250700 chr4D 88.000 75 6 3 3139 3210 508676162 508676088 6.810000e-13 86.1
40 TraesCS1A01G250700 chrUn 96.491 57 1 1 3135 3191 476757111 476757056 4.070000e-15 93.5
41 TraesCS1A01G250700 chr6D 96.491 57 1 1 3135 3191 327006608 327006553 4.070000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G250700 chr1A 442473348 442477173 3825 False 7066.00 7066 100.00000 1 3826 1 chr1A.!!$F1 3825
1 TraesCS1A01G250700 chr1B 459812568 459815317 2749 False 2066.50 3709 92.73300 1 2924 2 chr1B.!!$F1 2923
2 TraesCS1A01G250700 chr1D 342847793 342852478 4685 False 1218.75 3699 90.05975 1 3596 4 chr1D.!!$F3 3595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
220 221 0.601311 GGCAACGCTCTCTCACACTT 60.601 55.000 0.0 0.0 0.0 3.16 F
1408 1431 1.134670 AGATTGCCTCGCTTCTGTACC 60.135 52.381 0.0 0.0 0.0 3.34 F
2055 2090 0.798771 GGCTCGTCTCTGTGTTAGCG 60.799 60.000 0.0 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1654 1678 0.109272 GAGTCCACAAGATCGACGCA 60.109 55.0 0.0 0.0 0.0 5.24 R
2452 2500 0.035458 AAGTTGGACCTCAGGAAGCG 59.965 55.0 0.0 0.0 0.0 4.68 R
3693 5047 0.035458 AGGAGTAGCACACAACAGGC 59.965 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
173 174 4.489810 CTCTGCGCTTTCTTTTCTCTCTA 58.510 43.478 9.73 0.00 0.00 2.43
220 221 0.601311 GGCAACGCTCTCTCACACTT 60.601 55.000 0.00 0.00 0.00 3.16
262 263 1.283321 AGCCACCTTCTCCTCCAATTC 59.717 52.381 0.00 0.00 0.00 2.17
300 301 5.542779 ACAGACAAGATTATATCTTCCGCC 58.457 41.667 0.00 0.00 46.17 6.13
381 382 1.205893 GATGAGGTTCTCGCCTGTCTT 59.794 52.381 0.00 0.00 39.34 3.01
448 449 1.521906 TTACTGCCGTGTGTTGCGT 60.522 52.632 0.00 0.00 0.00 5.24
577 584 1.336240 CCTGCTTAGGTTGTTGCTTGC 60.336 52.381 0.00 0.00 0.00 4.01
702 714 7.861372 GCTCTTTTTGTCCTGAATCATCATATG 59.139 37.037 0.00 0.00 34.37 1.78
740 752 4.299155 TGTAAGCAGAAAGTGTTCGAGAG 58.701 43.478 0.00 0.00 38.90 3.20
953 965 4.082845 TCTCAATGAGGACGAAGACTTCT 58.917 43.478 10.71 0.68 0.00 2.85
982 994 6.073331 CGCAAATGTGGAAACCAATTAACATT 60.073 34.615 0.00 0.00 38.82 2.71
1027 1047 7.183580 TTGCAAGCAAAAATGGTAACATAAC 57.816 32.000 4.79 0.00 44.78 1.89
1092 1112 5.416326 TGCATCATGTGATCACTGAATTTCA 59.584 36.000 25.55 17.01 31.21 2.69
1095 1115 8.297426 GCATCATGTGATCACTGAATTTCATAT 58.703 33.333 25.55 4.90 31.21 1.78
1100 1120 9.617523 ATGTGATCACTGAATTTCATATGTACA 57.382 29.630 25.55 0.00 0.00 2.90
1143 1163 4.081322 TCTAAAAGCTCAAAGGGAACGT 57.919 40.909 0.00 0.00 0.00 3.99
1193 1213 7.115378 GTCTTCTTCATTGCACTATTTGGTTTG 59.885 37.037 0.00 0.00 0.00 2.93
1198 1218 6.098679 TCATTGCACTATTTGGTTTGTATGC 58.901 36.000 0.00 0.00 0.00 3.14
1398 1421 2.263077 GTACACAGACAGATTGCCTCG 58.737 52.381 0.00 0.00 0.00 4.63
1408 1431 1.134670 AGATTGCCTCGCTTCTGTACC 60.135 52.381 0.00 0.00 0.00 3.34
1535 1559 1.902765 ATGTACCCCGGTCCGTTTCC 61.903 60.000 11.06 0.00 0.00 3.13
1544 1568 1.135315 CGGTCCGTTTCCTCGTCATTA 60.135 52.381 2.08 0.00 0.00 1.90
1654 1678 0.972883 GGGAGCGCAGAGAGGATATT 59.027 55.000 11.47 0.00 0.00 1.28
1986 2021 8.512956 CCAGATGAGATTGTGGATTATTTGATC 58.487 37.037 0.00 0.00 31.04 2.92
2052 2087 1.174783 GGAGGCTCGTCTCTGTGTTA 58.825 55.000 8.69 0.00 34.39 2.41
2055 2090 0.798771 GGCTCGTCTCTGTGTTAGCG 60.799 60.000 0.00 0.00 0.00 4.26
2073 2108 2.032030 AGCGAACGACCATGACAAAAAG 60.032 45.455 0.00 0.00 0.00 2.27
2074 2109 2.916111 CGAACGACCATGACAAAAAGG 58.084 47.619 0.00 0.00 0.00 3.11
2075 2110 2.546368 CGAACGACCATGACAAAAAGGA 59.454 45.455 0.00 0.00 0.00 3.36
2109 2144 1.372004 CACCCACAAAGCGCATGTG 60.372 57.895 28.99 28.99 46.05 3.21
2144 2181 1.362768 GTGACTCTCGCATGCAATCA 58.637 50.000 19.57 10.08 0.00 2.57
2157 2201 4.218635 GCATGCAATCATCTCAGATCCATT 59.781 41.667 14.21 0.00 0.00 3.16
2185 2232 4.816385 TGTTCTTGTTGCCTAGAGTGAAAG 59.184 41.667 0.00 0.00 0.00 2.62
2418 2466 7.827729 CCGGCCATATCAATCATATCATATCAT 59.172 37.037 2.24 0.00 0.00 2.45
2419 2467 9.880157 CGGCCATATCAATCATATCATATCATA 57.120 33.333 2.24 0.00 0.00 2.15
2447 2495 8.960591 ACTCCCTTCATTTCAAAATATAGTGTG 58.039 33.333 0.00 0.00 0.00 3.82
2448 2496 7.771183 TCCCTTCATTTCAAAATATAGTGTGC 58.229 34.615 0.00 0.00 0.00 4.57
2449 2497 6.980397 CCCTTCATTTCAAAATATAGTGTGCC 59.020 38.462 0.00 0.00 0.00 5.01
2450 2498 6.980397 CCTTCATTTCAAAATATAGTGTGCCC 59.020 38.462 0.00 0.00 0.00 5.36
2451 2499 6.130298 TCATTTCAAAATATAGTGTGCCCG 57.870 37.500 0.00 0.00 0.00 6.13
2452 2500 4.364415 TTTCAAAATATAGTGTGCCCGC 57.636 40.909 0.00 0.00 0.00 6.13
2453 2501 1.937223 TCAAAATATAGTGTGCCCGCG 59.063 47.619 0.00 0.00 0.00 6.46
2454 2502 0.661020 AAAATATAGTGTGCCCGCGC 59.339 50.000 0.00 0.00 0.00 6.86
2455 2503 0.179056 AAATATAGTGTGCCCGCGCT 60.179 50.000 5.56 0.34 35.36 5.92
2456 2504 0.179056 AATATAGTGTGCCCGCGCTT 60.179 50.000 5.56 0.00 35.36 4.68
2457 2505 0.600255 ATATAGTGTGCCCGCGCTTC 60.600 55.000 5.56 0.00 35.36 3.86
2458 2506 2.638330 TATAGTGTGCCCGCGCTTCC 62.638 60.000 5.56 0.00 35.36 3.46
2465 2513 4.821589 CCCGCGCTTCCTGAGGTC 62.822 72.222 5.56 0.00 0.00 3.85
2466 2514 4.821589 CCGCGCTTCCTGAGGTCC 62.822 72.222 5.56 0.00 0.00 4.46
2467 2515 4.069232 CGCGCTTCCTGAGGTCCA 62.069 66.667 5.56 0.00 0.00 4.02
2468 2516 2.347490 GCGCTTCCTGAGGTCCAA 59.653 61.111 0.00 0.00 0.00 3.53
2469 2517 2.035442 GCGCTTCCTGAGGTCCAAC 61.035 63.158 0.00 0.00 0.00 3.77
2470 2518 1.674057 CGCTTCCTGAGGTCCAACT 59.326 57.895 0.00 0.00 0.00 3.16
2471 2519 0.035458 CGCTTCCTGAGGTCCAACTT 59.965 55.000 0.00 0.00 0.00 2.66
2472 2520 1.543429 CGCTTCCTGAGGTCCAACTTT 60.543 52.381 0.00 0.00 0.00 2.66
2473 2521 1.882623 GCTTCCTGAGGTCCAACTTTG 59.117 52.381 0.00 0.00 0.00 2.77
2474 2522 2.487265 GCTTCCTGAGGTCCAACTTTGA 60.487 50.000 0.00 0.00 0.00 2.69
2475 2523 2.930826 TCCTGAGGTCCAACTTTGAC 57.069 50.000 0.00 0.00 0.00 3.18
2476 2524 1.420138 TCCTGAGGTCCAACTTTGACC 59.580 52.381 0.00 4.16 39.18 4.02
2477 2525 1.142870 CCTGAGGTCCAACTTTGACCA 59.857 52.381 13.24 0.00 41.22 4.02
2478 2526 2.224867 CCTGAGGTCCAACTTTGACCAT 60.225 50.000 13.24 0.72 41.22 3.55
2479 2527 3.009033 CCTGAGGTCCAACTTTGACCATA 59.991 47.826 13.24 2.61 41.22 2.74
2480 2528 4.506625 CCTGAGGTCCAACTTTGACCATAA 60.507 45.833 13.24 0.00 41.22 1.90
2481 2529 5.055265 TGAGGTCCAACTTTGACCATAAA 57.945 39.130 13.24 0.00 41.22 1.40
2482 2530 5.640147 TGAGGTCCAACTTTGACCATAAAT 58.360 37.500 13.24 0.00 41.22 1.40
2483 2531 6.074648 TGAGGTCCAACTTTGACCATAAATT 58.925 36.000 13.24 0.00 41.22 1.82
2484 2532 6.553100 TGAGGTCCAACTTTGACCATAAATTT 59.447 34.615 13.24 0.00 41.22 1.82
2485 2533 7.726291 TGAGGTCCAACTTTGACCATAAATTTA 59.274 33.333 13.24 0.00 41.22 1.40
2486 2534 8.485578 AGGTCCAACTTTGACCATAAATTTAA 57.514 30.769 13.24 0.00 41.22 1.52
2487 2535 8.364894 AGGTCCAACTTTGACCATAAATTTAAC 58.635 33.333 13.24 0.00 41.22 2.01
2488 2536 7.601130 GGTCCAACTTTGACCATAAATTTAACC 59.399 37.037 1.21 0.00 38.76 2.85
2489 2537 8.145122 GTCCAACTTTGACCATAAATTTAACCA 58.855 33.333 1.21 0.00 0.00 3.67
2490 2538 8.705594 TCCAACTTTGACCATAAATTTAACCAA 58.294 29.630 1.21 2.19 0.00 3.67
2491 2539 8.769891 CCAACTTTGACCATAAATTTAACCAAC 58.230 33.333 1.21 0.00 0.00 3.77
2492 2540 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
2493 2541 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
2494 2542 8.414778 ACTTTGACCATAAATTTAACCAACGAA 58.585 29.630 1.21 0.22 0.00 3.85
2495 2543 9.418045 CTTTGACCATAAATTTAACCAACGAAT 57.582 29.630 1.21 0.00 0.00 3.34
2496 2544 9.765795 TTTGACCATAAATTTAACCAACGAATT 57.234 25.926 1.21 0.00 0.00 2.17
2497 2545 8.973835 TGACCATAAATTTAACCAACGAATTC 57.026 30.769 1.21 0.00 0.00 2.17
2498 2546 8.577296 TGACCATAAATTTAACCAACGAATTCA 58.423 29.630 6.22 0.00 0.00 2.57
2499 2547 8.751302 ACCATAAATTTAACCAACGAATTCAC 57.249 30.769 6.22 0.00 0.00 3.18
2500 2548 8.581578 ACCATAAATTTAACCAACGAATTCACT 58.418 29.630 6.22 0.00 0.00 3.41
2501 2549 8.859156 CCATAAATTTAACCAACGAATTCACTG 58.141 33.333 6.22 1.63 0.00 3.66
2502 2550 8.859156 CATAAATTTAACCAACGAATTCACTGG 58.141 33.333 17.39 17.39 34.95 4.00
2503 2551 6.399639 AATTTAACCAACGAATTCACTGGT 57.600 33.333 18.46 18.46 44.12 4.00
2504 2552 7.513371 AATTTAACCAACGAATTCACTGGTA 57.487 32.000 22.46 11.98 41.36 3.25
2505 2553 7.696992 ATTTAACCAACGAATTCACTGGTAT 57.303 32.000 22.46 16.37 41.36 2.73
2506 2554 8.795842 ATTTAACCAACGAATTCACTGGTATA 57.204 30.769 22.46 15.67 41.36 1.47
2507 2555 8.618702 TTTAACCAACGAATTCACTGGTATAA 57.381 30.769 22.46 18.86 41.36 0.98
2508 2556 6.490566 AACCAACGAATTCACTGGTATAAC 57.509 37.500 22.46 0.00 41.36 1.89
2509 2557 5.801380 ACCAACGAATTCACTGGTATAACT 58.199 37.500 21.38 2.29 40.42 2.24
2510 2558 6.235664 ACCAACGAATTCACTGGTATAACTT 58.764 36.000 21.38 1.71 40.42 2.66
2511 2559 6.713450 ACCAACGAATTCACTGGTATAACTTT 59.287 34.615 21.38 1.12 40.42 2.66
2512 2560 7.229907 ACCAACGAATTCACTGGTATAACTTTT 59.770 33.333 21.38 0.54 40.42 2.27
2513 2561 7.537306 CCAACGAATTCACTGGTATAACTTTTG 59.463 37.037 12.67 0.00 0.00 2.44
2514 2562 6.608610 ACGAATTCACTGGTATAACTTTTGC 58.391 36.000 6.22 0.00 0.00 3.68
2515 2563 6.430000 ACGAATTCACTGGTATAACTTTTGCT 59.570 34.615 6.22 0.00 0.00 3.91
2516 2564 6.961554 CGAATTCACTGGTATAACTTTTGCTC 59.038 38.462 6.22 0.00 0.00 4.26
2517 2565 6.759497 ATTCACTGGTATAACTTTTGCTCC 57.241 37.500 0.00 0.00 0.00 4.70
2518 2566 4.585879 TCACTGGTATAACTTTTGCTCCC 58.414 43.478 0.00 0.00 0.00 4.30
2519 2567 3.374058 CACTGGTATAACTTTTGCTCCCG 59.626 47.826 0.00 0.00 0.00 5.14
2520 2568 2.354821 CTGGTATAACTTTTGCTCCCGC 59.645 50.000 0.00 0.00 0.00 6.13
2521 2569 1.674441 GGTATAACTTTTGCTCCCGCC 59.326 52.381 0.00 0.00 34.43 6.13
2522 2570 1.329599 GTATAACTTTTGCTCCCGCCG 59.670 52.381 0.00 0.00 34.43 6.46
2523 2571 1.654023 ATAACTTTTGCTCCCGCCGC 61.654 55.000 0.00 0.00 34.43 6.53
2524 2572 4.887932 TATAACTTTTGCTCCCGCCGCA 62.888 50.000 0.00 0.00 35.22 5.69
2525 2573 4.107051 CTTTTGCTCCCGCCGCAG 62.107 66.667 0.00 0.00 38.80 5.18
2526 2574 4.947147 TTTTGCTCCCGCCGCAGT 62.947 61.111 0.00 0.00 38.80 4.40
2538 2586 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
2539 2587 2.338984 GCAGTCGGTCTCGTTGGT 59.661 61.111 0.00 0.00 37.69 3.67
2540 2588 1.300697 GCAGTCGGTCTCGTTGGTT 60.301 57.895 0.00 0.00 37.69 3.67
2541 2589 0.038892 GCAGTCGGTCTCGTTGGTTA 60.039 55.000 0.00 0.00 37.69 2.85
2542 2590 1.603678 GCAGTCGGTCTCGTTGGTTAA 60.604 52.381 0.00 0.00 37.69 2.01
2543 2591 2.746269 CAGTCGGTCTCGTTGGTTAAA 58.254 47.619 0.00 0.00 37.69 1.52
2544 2592 3.323243 CAGTCGGTCTCGTTGGTTAAAT 58.677 45.455 0.00 0.00 37.69 1.40
2545 2593 3.744426 CAGTCGGTCTCGTTGGTTAAATT 59.256 43.478 0.00 0.00 37.69 1.82
2546 2594 4.212636 CAGTCGGTCTCGTTGGTTAAATTT 59.787 41.667 0.00 0.00 37.69 1.82
2547 2595 5.406175 CAGTCGGTCTCGTTGGTTAAATTTA 59.594 40.000 0.00 0.00 37.69 1.40
2548 2596 6.091713 CAGTCGGTCTCGTTGGTTAAATTTAT 59.908 38.462 0.00 0.00 37.69 1.40
2549 2597 6.091713 AGTCGGTCTCGTTGGTTAAATTTATG 59.908 38.462 0.00 0.00 37.69 1.90
2550 2598 5.352016 TCGGTCTCGTTGGTTAAATTTATGG 59.648 40.000 0.00 0.00 37.69 2.74
2551 2599 5.122711 CGGTCTCGTTGGTTAAATTTATGGT 59.877 40.000 0.00 0.00 0.00 3.55
2552 2600 6.549061 GGTCTCGTTGGTTAAATTTATGGTC 58.451 40.000 0.00 0.00 0.00 4.02
2553 2601 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
2554 2602 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
2555 2603 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
2556 2604 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
2557 2605 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
2558 2606 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
2559 2607 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
2560 2608 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
2562 2610 9.757227 TGGTTAAATTTATGGTCAAAGTTGAAG 57.243 29.630 0.00 0.00 39.21 3.02
2563 2611 8.708742 GGTTAAATTTATGGTCAAAGTTGAAGC 58.291 33.333 0.00 0.00 39.21 3.86
2564 2612 9.255304 GTTAAATTTATGGTCAAAGTTGAAGCA 57.745 29.630 0.00 0.00 39.21 3.91
2565 2613 7.713764 AAATTTATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
2566 2614 4.481930 TTATGGTCAAAGTTGAAGCACG 57.518 40.909 0.00 0.00 39.21 5.34
2567 2615 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
2568 2616 0.310854 GGTCAAAGTTGAAGCACGGG 59.689 55.000 0.00 0.00 39.21 5.28
2569 2617 1.305201 GTCAAAGTTGAAGCACGGGA 58.695 50.000 0.00 0.00 39.21 5.14
2570 2618 1.673920 GTCAAAGTTGAAGCACGGGAA 59.326 47.619 0.00 0.00 39.21 3.97
2571 2619 2.293399 GTCAAAGTTGAAGCACGGGAAT 59.707 45.455 0.00 0.00 39.21 3.01
2572 2620 3.500680 GTCAAAGTTGAAGCACGGGAATA 59.499 43.478 0.00 0.00 39.21 1.75
2573 2621 3.751175 TCAAAGTTGAAGCACGGGAATAG 59.249 43.478 0.00 0.00 33.55 1.73
2574 2622 3.695830 AAGTTGAAGCACGGGAATAGA 57.304 42.857 0.00 0.00 0.00 1.98
2575 2623 3.252974 AGTTGAAGCACGGGAATAGAG 57.747 47.619 0.00 0.00 0.00 2.43
2576 2624 2.093447 AGTTGAAGCACGGGAATAGAGG 60.093 50.000 0.00 0.00 0.00 3.69
2577 2625 1.860641 TGAAGCACGGGAATAGAGGA 58.139 50.000 0.00 0.00 0.00 3.71
2578 2626 2.184533 TGAAGCACGGGAATAGAGGAA 58.815 47.619 0.00 0.00 0.00 3.36
2579 2627 2.168521 TGAAGCACGGGAATAGAGGAAG 59.831 50.000 0.00 0.00 0.00 3.46
2580 2628 0.466124 AGCACGGGAATAGAGGAAGC 59.534 55.000 0.00 0.00 0.00 3.86
2581 2629 0.178068 GCACGGGAATAGAGGAAGCA 59.822 55.000 0.00 0.00 0.00 3.91
2582 2630 1.941325 CACGGGAATAGAGGAAGCAC 58.059 55.000 0.00 0.00 0.00 4.40
2583 2631 1.482593 CACGGGAATAGAGGAAGCACT 59.517 52.381 0.00 0.00 0.00 4.40
2584 2632 2.693591 CACGGGAATAGAGGAAGCACTA 59.306 50.000 0.00 0.00 0.00 2.74
2585 2633 3.322254 CACGGGAATAGAGGAAGCACTAT 59.678 47.826 0.00 0.00 0.00 2.12
2586 2634 4.523173 CACGGGAATAGAGGAAGCACTATA 59.477 45.833 0.00 0.00 0.00 1.31
2587 2635 5.010719 CACGGGAATAGAGGAAGCACTATAA 59.989 44.000 0.00 0.00 0.00 0.98
2588 2636 5.780793 ACGGGAATAGAGGAAGCACTATAAT 59.219 40.000 0.00 0.00 0.00 1.28
2589 2637 6.270231 ACGGGAATAGAGGAAGCACTATAATT 59.730 38.462 0.00 0.00 0.00 1.40
2590 2638 7.162082 CGGGAATAGAGGAAGCACTATAATTT 58.838 38.462 0.00 0.00 0.00 1.82
2591 2639 7.118390 CGGGAATAGAGGAAGCACTATAATTTG 59.882 40.741 0.00 0.00 0.00 2.32
2592 2640 7.391833 GGGAATAGAGGAAGCACTATAATTTGG 59.608 40.741 0.00 0.00 0.00 3.28
2593 2641 8.157476 GGAATAGAGGAAGCACTATAATTTGGA 58.843 37.037 0.00 0.00 0.00 3.53
2594 2642 9.561069 GAATAGAGGAAGCACTATAATTTGGAA 57.439 33.333 0.00 0.00 0.00 3.53
2596 2644 7.814264 AGAGGAAGCACTATAATTTGGAATG 57.186 36.000 0.00 0.00 0.00 2.67
2597 2645 7.577303 AGAGGAAGCACTATAATTTGGAATGA 58.423 34.615 0.00 0.00 0.00 2.57
2598 2646 8.055181 AGAGGAAGCACTATAATTTGGAATGAA 58.945 33.333 0.00 0.00 0.00 2.57
2599 2647 8.230472 AGGAAGCACTATAATTTGGAATGAAG 57.770 34.615 0.00 0.00 0.00 3.02
2600 2648 7.286316 AGGAAGCACTATAATTTGGAATGAAGG 59.714 37.037 0.00 0.00 0.00 3.46
2601 2649 6.966534 AGCACTATAATTTGGAATGAAGGG 57.033 37.500 0.00 0.00 0.00 3.95
2602 2650 6.672593 AGCACTATAATTTGGAATGAAGGGA 58.327 36.000 0.00 0.00 0.00 4.20
2603 2651 6.774656 AGCACTATAATTTGGAATGAAGGGAG 59.225 38.462 0.00 0.00 0.00 4.30
2643 2691 0.951558 GGGTGACGAAGCATTGTTGT 59.048 50.000 0.00 0.00 0.00 3.32
2738 2786 0.602638 GGCACGTCAAGATCCACACA 60.603 55.000 0.00 0.00 0.00 3.72
2813 2861 0.234884 CCACGGAGTTTGCTCGTTTC 59.765 55.000 0.00 0.00 41.61 2.78
2832 2880 1.544691 TCCTTGACGGCTGAAGACTAC 59.455 52.381 0.00 0.00 0.00 2.73
2833 2881 1.546476 CCTTGACGGCTGAAGACTACT 59.454 52.381 0.00 0.00 0.00 2.57
2834 2882 2.753452 CCTTGACGGCTGAAGACTACTA 59.247 50.000 0.00 0.00 0.00 1.82
2835 2883 3.181495 CCTTGACGGCTGAAGACTACTAG 60.181 52.174 0.00 0.00 0.00 2.57
2836 2884 3.069079 TGACGGCTGAAGACTACTAGT 57.931 47.619 0.00 0.00 0.00 2.57
2837 2885 4.212143 TGACGGCTGAAGACTACTAGTA 57.788 45.455 0.00 1.89 0.00 1.82
2838 2886 4.190001 TGACGGCTGAAGACTACTAGTAG 58.810 47.826 25.30 25.30 39.04 2.57
2839 2887 4.081254 TGACGGCTGAAGACTACTAGTAGA 60.081 45.833 31.93 11.71 36.97 2.59
2840 2888 4.190772 ACGGCTGAAGACTACTAGTAGAC 58.809 47.826 31.93 26.01 36.97 2.59
2841 2889 4.190001 CGGCTGAAGACTACTAGTAGACA 58.810 47.826 31.93 22.47 36.97 3.41
2842 2890 4.271533 CGGCTGAAGACTACTAGTAGACAG 59.728 50.000 31.93 28.39 36.97 3.51
2843 2891 5.430007 GGCTGAAGACTACTAGTAGACAGA 58.570 45.833 31.93 14.65 36.97 3.41
2844 2892 5.881443 GGCTGAAGACTACTAGTAGACAGAA 59.119 44.000 31.93 15.64 36.97 3.02
2845 2893 6.183360 GGCTGAAGACTACTAGTAGACAGAAC 60.183 46.154 31.93 22.51 36.97 3.01
2867 2915 5.156355 ACATGTCGATTCATCTGTTTTTGC 58.844 37.500 0.00 0.00 0.00 3.68
2869 2917 6.149308 ACATGTCGATTCATCTGTTTTTGCTA 59.851 34.615 0.00 0.00 0.00 3.49
2899 2947 4.740205 GCCCTTCTGTTTTCTTTTCTTTCG 59.260 41.667 0.00 0.00 0.00 3.46
2917 2965 1.978617 GTGGGACTGCACAATGGGG 60.979 63.158 0.00 0.00 0.00 4.96
2930 2978 2.433970 ACAATGGGGTTGGAAGTTGTTG 59.566 45.455 0.00 0.00 42.28 3.33
2931 2979 2.433970 CAATGGGGTTGGAAGTTGTTGT 59.566 45.455 0.00 0.00 34.06 3.32
2932 2980 2.239681 TGGGGTTGGAAGTTGTTGTT 57.760 45.000 0.00 0.00 0.00 2.83
2944 2992 4.110036 AGTTGTTGTTCAGCTGTTTTCC 57.890 40.909 14.67 1.15 36.30 3.13
2946 2994 4.220602 AGTTGTTGTTCAGCTGTTTTCCTT 59.779 37.500 14.67 0.00 36.30 3.36
2950 2998 3.884895 TGTTCAGCTGTTTTCCTTCTCA 58.115 40.909 14.67 0.00 0.00 3.27
2971 3019 5.245531 TCAAAGGTAGGTGTAGCATTCTTG 58.754 41.667 0.00 0.00 0.00 3.02
3000 3048 7.507733 AAGGATGAAGCAAATATCATGAGAC 57.492 36.000 0.09 0.00 36.45 3.36
3019 3067 7.566760 TGAGACTGAATAAGTTTGCTTTTCA 57.433 32.000 0.00 0.00 40.07 2.69
3100 3180 8.677300 GTTTCAGGAATGAATGATACTAGCAAA 58.323 33.333 0.00 0.00 0.00 3.68
3101 3181 8.806429 TTCAGGAATGAATGATACTAGCAAAA 57.194 30.769 0.00 0.00 0.00 2.44
3102 3182 8.806429 TCAGGAATGAATGATACTAGCAAAAA 57.194 30.769 0.00 0.00 0.00 1.94
3149 3229 8.118976 TCATCTACAGGTAAATATTACCTCCG 57.881 38.462 16.87 10.72 45.55 4.63
3154 3234 4.345837 CAGGTAAATATTACCTCCGTCCCA 59.654 45.833 16.87 0.00 45.55 4.37
3155 3235 4.970640 AGGTAAATATTACCTCCGTCCCAA 59.029 41.667 14.55 0.00 44.10 4.12
3156 3236 5.429435 AGGTAAATATTACCTCCGTCCCAAA 59.571 40.000 14.55 0.00 44.10 3.28
3160 3240 7.812690 AAATATTACCTCCGTCCCAAATTAC 57.187 36.000 0.00 0.00 0.00 1.89
3162 3242 4.914177 TTACCTCCGTCCCAAATTACTT 57.086 40.909 0.00 0.00 0.00 2.24
3163 3243 3.067684 ACCTCCGTCCCAAATTACTTG 57.932 47.619 0.00 0.00 34.52 3.16
3164 3244 2.374170 ACCTCCGTCCCAAATTACTTGT 59.626 45.455 0.00 0.00 32.65 3.16
3165 3245 3.007635 CCTCCGTCCCAAATTACTTGTC 58.992 50.000 0.00 0.00 32.65 3.18
3166 3246 3.307480 CCTCCGTCCCAAATTACTTGTCT 60.307 47.826 0.00 0.00 32.65 3.41
3167 3247 4.324267 CTCCGTCCCAAATTACTTGTCTT 58.676 43.478 0.00 0.00 32.65 3.01
3168 3248 5.484715 CTCCGTCCCAAATTACTTGTCTTA 58.515 41.667 0.00 0.00 32.65 2.10
3169 3249 5.484715 TCCGTCCCAAATTACTTGTCTTAG 58.515 41.667 0.00 0.00 32.65 2.18
3202 3282 3.662759 ACGGATGTAATTTGGGTGGAT 57.337 42.857 0.00 0.00 0.00 3.41
3204 3284 2.034558 CGGATGTAATTTGGGTGGATGC 59.965 50.000 0.00 0.00 0.00 3.91
3211 4481 0.323360 TTTGGGTGGATGCAGTAGGC 60.323 55.000 0.00 0.00 45.13 3.93
3243 4513 4.285020 TGCTCTGAATCTGATCAGGTACT 58.715 43.478 22.42 0.74 45.55 2.73
3244 4514 4.340666 TGCTCTGAATCTGATCAGGTACTC 59.659 45.833 22.42 11.47 45.55 2.59
3245 4515 4.340666 GCTCTGAATCTGATCAGGTACTCA 59.659 45.833 22.42 15.35 45.55 3.41
3247 4517 4.892345 TCTGAATCTGATCAGGTACTCAGG 59.108 45.833 26.62 14.71 45.55 3.86
3248 4518 4.614475 TGAATCTGATCAGGTACTCAGGT 58.386 43.478 22.42 0.00 39.48 4.00
3249 4519 5.766590 TGAATCTGATCAGGTACTCAGGTA 58.233 41.667 22.42 0.00 39.48 3.08
3251 4521 3.542648 TCTGATCAGGTACTCAGGTACG 58.457 50.000 22.42 0.00 46.62 3.67
3252 4522 3.054582 TCTGATCAGGTACTCAGGTACGT 60.055 47.826 22.42 0.00 46.62 3.57
3305 4647 8.492673 TGTTCAGTTATTTAGCTCGAAATCAT 57.507 30.769 0.00 0.00 31.51 2.45
3336 4679 8.316214 AGCTCATTTTGATGAATTTTATGGTGT 58.684 29.630 0.00 0.00 0.00 4.16
3377 4720 9.516314 AATCAAAAGCTACTTCAAGTTACAAAC 57.484 29.630 0.00 0.00 0.00 2.93
3383 4726 4.976224 ACTTCAAGTTACAAACACCCAC 57.024 40.909 0.00 0.00 0.00 4.61
3386 4729 3.283751 TCAAGTTACAAACACCCACCTG 58.716 45.455 0.00 0.00 0.00 4.00
3387 4730 3.020984 CAAGTTACAAACACCCACCTGT 58.979 45.455 0.00 0.00 0.00 4.00
3391 4734 0.106719 ACAAACACCCACCTGTCAGG 60.107 55.000 17.88 17.88 42.49 3.86
3446 4789 4.410555 TGAATAAAAGGCCACCAAGGTTTT 59.589 37.500 5.01 3.50 40.61 2.43
3465 4808 8.762481 AGGTTTTTAAGTTTTAGACCTGACAT 57.238 30.769 0.00 0.00 34.90 3.06
3466 4809 9.197306 AGGTTTTTAAGTTTTAGACCTGACATT 57.803 29.630 0.00 0.00 34.90 2.71
3467 4810 9.244799 GGTTTTTAAGTTTTAGACCTGACATTG 57.755 33.333 0.00 0.00 0.00 2.82
3475 4818 3.864789 AGACCTGACATTGGTGTTCTT 57.135 42.857 0.00 0.00 39.09 2.52
3476 4819 4.170468 AGACCTGACATTGGTGTTCTTT 57.830 40.909 0.00 0.00 39.09 2.52
3513 4856 1.656095 GAGGCTCTTCGACGATGTTTG 59.344 52.381 7.40 4.39 0.00 2.93
3514 4857 1.000955 AGGCTCTTCGACGATGTTTGT 59.999 47.619 10.18 0.00 0.00 2.83
3522 4865 2.542178 TCGACGATGTTTGTTTCAGTGG 59.458 45.455 0.00 0.00 0.00 4.00
3523 4866 2.349438 CGACGATGTTTGTTTCAGTGGG 60.349 50.000 0.00 0.00 0.00 4.61
3527 4870 3.058914 CGATGTTTGTTTCAGTGGGAGAC 60.059 47.826 0.00 0.00 0.00 3.36
3531 4874 2.455674 TGTTTCAGTGGGAGACGATG 57.544 50.000 0.00 0.00 33.44 3.84
3546 4900 3.306917 ACGATGTTTCCGTCATGTGTA 57.693 42.857 0.00 0.00 34.97 2.90
3547 4901 3.655486 ACGATGTTTCCGTCATGTGTAA 58.345 40.909 0.00 0.00 34.97 2.41
3561 4915 7.121911 CGTCATGTGTAATGACTTCATCAATC 58.878 38.462 14.59 0.00 44.50 2.67
3574 4928 9.681692 TGACTTCATCAATCTTAAAATGTGTTG 57.318 29.630 0.00 0.00 33.02 3.33
3596 4950 5.674525 TGGCTCAATCTCTCGAATATGTTT 58.325 37.500 0.00 0.00 0.00 2.83
3597 4951 6.816136 TGGCTCAATCTCTCGAATATGTTTA 58.184 36.000 0.00 0.00 0.00 2.01
3598 4952 7.445121 TGGCTCAATCTCTCGAATATGTTTAT 58.555 34.615 0.00 0.00 0.00 1.40
3599 4953 8.585018 TGGCTCAATCTCTCGAATATGTTTATA 58.415 33.333 0.00 0.00 0.00 0.98
3600 4954 9.081997 GGCTCAATCTCTCGAATATGTTTATAG 57.918 37.037 0.00 0.00 0.00 1.31
3601 4955 9.081997 GCTCAATCTCTCGAATATGTTTATAGG 57.918 37.037 0.00 0.00 0.00 2.57
3602 4956 9.579768 CTCAATCTCTCGAATATGTTTATAGGG 57.420 37.037 0.00 0.00 0.00 3.53
3603 4957 9.309224 TCAATCTCTCGAATATGTTTATAGGGA 57.691 33.333 0.00 0.00 0.00 4.20
3618 4972 9.884636 TGTTTATAGGGATATGTATGTATGTGC 57.115 33.333 0.00 0.00 0.00 4.57
3621 4975 7.978099 ATAGGGATATGTATGTATGTGCTCA 57.022 36.000 0.00 0.00 0.00 4.26
3622 4976 6.881067 AGGGATATGTATGTATGTGCTCAT 57.119 37.500 6.50 6.50 38.00 2.90
3623 4977 7.978099 AGGGATATGTATGTATGTGCTCATA 57.022 36.000 4.38 4.38 35.70 2.15
3624 4978 8.016301 AGGGATATGTATGTATGTGCTCATAG 57.984 38.462 8.69 0.00 37.23 2.23
3625 4979 7.070447 AGGGATATGTATGTATGTGCTCATAGG 59.930 40.741 8.69 0.00 37.23 2.57
3626 4980 7.147655 GGGATATGTATGTATGTGCTCATAGGT 60.148 40.741 8.69 3.92 37.23 3.08
3627 4981 8.914011 GGATATGTATGTATGTGCTCATAGGTA 58.086 37.037 8.69 3.06 37.23 3.08
3630 4984 7.775053 TGTATGTATGTGCTCATAGGTATGA 57.225 36.000 8.69 0.00 40.19 2.15
3645 4999 9.981114 TCATAGGTATGAGTATATGTGTTTGTG 57.019 33.333 0.00 0.00 37.76 3.33
3646 5000 9.764363 CATAGGTATGAGTATATGTGTTTGTGT 57.236 33.333 0.00 0.00 35.75 3.72
3647 5001 9.764363 ATAGGTATGAGTATATGTGTTTGTGTG 57.236 33.333 0.00 0.00 0.00 3.82
3648 5002 7.620880 AGGTATGAGTATATGTGTTTGTGTGT 58.379 34.615 0.00 0.00 0.00 3.72
3649 5003 8.755028 AGGTATGAGTATATGTGTTTGTGTGTA 58.245 33.333 0.00 0.00 0.00 2.90
3650 5004 9.542462 GGTATGAGTATATGTGTTTGTGTGTAT 57.458 33.333 0.00 0.00 0.00 2.29
3653 5007 8.702163 TGAGTATATGTGTTTGTGTGTATGAG 57.298 34.615 0.00 0.00 0.00 2.90
3654 5008 8.311109 TGAGTATATGTGTTTGTGTGTATGAGT 58.689 33.333 0.00 0.00 0.00 3.41
3655 5009 9.797556 GAGTATATGTGTTTGTGTGTATGAGTA 57.202 33.333 0.00 0.00 0.00 2.59
3660 5014 7.302350 TGTGTTTGTGTGTATGAGTATATGC 57.698 36.000 0.00 0.00 0.00 3.14
3661 5015 6.876257 TGTGTTTGTGTGTATGAGTATATGCA 59.124 34.615 0.00 0.00 0.00 3.96
3662 5016 7.148490 TGTGTTTGTGTGTATGAGTATATGCAC 60.148 37.037 0.00 0.00 41.96 4.57
3663 5017 6.315144 TGTTTGTGTGTATGAGTATATGCACC 59.685 38.462 0.00 0.00 41.24 5.01
3664 5018 4.616953 TGTGTGTATGAGTATATGCACCG 58.383 43.478 0.00 0.00 41.24 4.94
3665 5019 3.987868 GTGTGTATGAGTATATGCACCGG 59.012 47.826 0.00 0.00 41.24 5.28
3666 5020 3.639561 TGTGTATGAGTATATGCACCGGT 59.360 43.478 0.00 0.00 41.24 5.28
3667 5021 3.987868 GTGTATGAGTATATGCACCGGTG 59.012 47.826 30.66 30.66 37.60 4.94
3668 5022 2.839486 ATGAGTATATGCACCGGTGG 57.161 50.000 34.58 17.30 0.00 4.61
3669 5023 1.783071 TGAGTATATGCACCGGTGGA 58.217 50.000 34.58 33.26 34.81 4.02
3670 5024 2.112190 TGAGTATATGCACCGGTGGAA 58.888 47.619 33.22 21.20 33.77 3.53
3671 5025 2.502130 TGAGTATATGCACCGGTGGAAA 59.498 45.455 33.22 18.16 33.77 3.13
3672 5026 3.055021 TGAGTATATGCACCGGTGGAAAA 60.055 43.478 33.22 23.37 33.77 2.29
3673 5027 4.134563 GAGTATATGCACCGGTGGAAAAT 58.865 43.478 33.22 27.75 33.77 1.82
3674 5028 4.134563 AGTATATGCACCGGTGGAAAATC 58.865 43.478 33.22 21.55 33.77 2.17
3675 5029 2.498644 TATGCACCGGTGGAAAATCA 57.501 45.000 33.22 21.66 33.77 2.57
3676 5030 1.626686 ATGCACCGGTGGAAAATCAA 58.373 45.000 33.22 7.45 33.77 2.57
3677 5031 0.671251 TGCACCGGTGGAAAATCAAC 59.329 50.000 34.58 15.63 0.00 3.18
3678 5032 0.958822 GCACCGGTGGAAAATCAACT 59.041 50.000 34.58 0.00 0.00 3.16
3679 5033 1.339929 GCACCGGTGGAAAATCAACTT 59.660 47.619 34.58 0.00 0.00 2.66
3680 5034 2.607038 GCACCGGTGGAAAATCAACTTC 60.607 50.000 34.58 10.35 0.00 3.01
3681 5035 2.030274 CACCGGTGGAAAATCAACTTCC 60.030 50.000 27.57 0.00 42.41 3.46
3682 5036 2.158519 ACCGGTGGAAAATCAACTTCCT 60.159 45.455 6.12 0.00 42.52 3.36
3683 5037 2.488153 CCGGTGGAAAATCAACTTCCTC 59.512 50.000 0.00 0.00 42.52 3.71
3684 5038 3.412386 CGGTGGAAAATCAACTTCCTCT 58.588 45.455 3.45 0.00 42.52 3.69
3685 5039 3.821033 CGGTGGAAAATCAACTTCCTCTT 59.179 43.478 3.45 0.00 42.52 2.85
3686 5040 5.001232 CGGTGGAAAATCAACTTCCTCTTA 58.999 41.667 3.45 0.00 42.52 2.10
3687 5041 5.106673 CGGTGGAAAATCAACTTCCTCTTAC 60.107 44.000 3.45 0.00 42.52 2.34
3688 5042 5.183331 GGTGGAAAATCAACTTCCTCTTACC 59.817 44.000 3.45 0.00 42.52 2.85
3689 5043 5.768164 GTGGAAAATCAACTTCCTCTTACCA 59.232 40.000 3.45 0.00 42.52 3.25
3690 5044 6.434340 GTGGAAAATCAACTTCCTCTTACCAT 59.566 38.462 3.45 0.00 42.52 3.55
3691 5045 6.434028 TGGAAAATCAACTTCCTCTTACCATG 59.566 38.462 3.45 0.00 42.52 3.66
3692 5046 6.434340 GGAAAATCAACTTCCTCTTACCATGT 59.566 38.462 0.00 0.00 39.49 3.21
3693 5047 6.824305 AAATCAACTTCCTCTTACCATGTG 57.176 37.500 0.00 0.00 0.00 3.21
3694 5048 3.674997 TCAACTTCCTCTTACCATGTGC 58.325 45.455 0.00 0.00 0.00 4.57
3695 5049 2.749621 CAACTTCCTCTTACCATGTGCC 59.250 50.000 0.00 0.00 0.00 5.01
3696 5050 2.269940 ACTTCCTCTTACCATGTGCCT 58.730 47.619 0.00 0.00 0.00 4.75
3697 5051 2.026822 ACTTCCTCTTACCATGTGCCTG 60.027 50.000 0.00 0.00 0.00 4.85
3698 5052 1.656587 TCCTCTTACCATGTGCCTGT 58.343 50.000 0.00 0.00 0.00 4.00
3699 5053 1.985159 TCCTCTTACCATGTGCCTGTT 59.015 47.619 0.00 0.00 0.00 3.16
3700 5054 2.086869 CCTCTTACCATGTGCCTGTTG 58.913 52.381 0.00 0.00 0.00 3.33
3701 5055 2.553028 CCTCTTACCATGTGCCTGTTGT 60.553 50.000 0.00 0.00 0.00 3.32
3702 5056 2.485426 CTCTTACCATGTGCCTGTTGTG 59.515 50.000 0.00 0.00 0.00 3.33
3703 5057 2.158682 TCTTACCATGTGCCTGTTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
3704 5058 1.603456 TACCATGTGCCTGTTGTGTG 58.397 50.000 0.00 0.00 0.00 3.82
3705 5059 1.007038 CCATGTGCCTGTTGTGTGC 60.007 57.895 0.00 0.00 0.00 4.57
3706 5060 1.457823 CCATGTGCCTGTTGTGTGCT 61.458 55.000 0.00 0.00 0.00 4.40
3707 5061 1.237533 CATGTGCCTGTTGTGTGCTA 58.762 50.000 0.00 0.00 0.00 3.49
3708 5062 1.069022 CATGTGCCTGTTGTGTGCTAC 60.069 52.381 0.00 0.00 0.00 3.58
3709 5063 0.180171 TGTGCCTGTTGTGTGCTACT 59.820 50.000 0.00 0.00 0.00 2.57
3710 5064 0.868406 GTGCCTGTTGTGTGCTACTC 59.132 55.000 0.00 0.00 0.00 2.59
3711 5065 0.250295 TGCCTGTTGTGTGCTACTCC 60.250 55.000 0.00 0.00 0.00 3.85
3712 5066 0.035458 GCCTGTTGTGTGCTACTCCT 59.965 55.000 0.00 0.00 0.00 3.69
3713 5067 1.275291 GCCTGTTGTGTGCTACTCCTA 59.725 52.381 0.00 0.00 0.00 2.94
3714 5068 2.931320 GCCTGTTGTGTGCTACTCCTAC 60.931 54.545 0.00 0.00 0.00 3.18
3715 5069 2.299013 CCTGTTGTGTGCTACTCCTACA 59.701 50.000 0.00 0.00 0.00 2.74
3716 5070 3.055819 CCTGTTGTGTGCTACTCCTACAT 60.056 47.826 0.00 0.00 0.00 2.29
3717 5071 4.563580 CCTGTTGTGTGCTACTCCTACATT 60.564 45.833 0.00 0.00 0.00 2.71
3718 5072 5.337250 CCTGTTGTGTGCTACTCCTACATTA 60.337 44.000 0.00 0.00 0.00 1.90
3719 5073 5.720202 TGTTGTGTGCTACTCCTACATTAG 58.280 41.667 0.00 0.00 0.00 1.73
3721 5075 4.350245 TGTGTGCTACTCCTACATTAGGT 58.650 43.478 0.00 0.00 46.32 3.08
3722 5076 4.159693 TGTGTGCTACTCCTACATTAGGTG 59.840 45.833 0.00 0.00 46.32 4.00
3728 5082 3.914426 CTCCTACATTAGGTGTGGCTT 57.086 47.619 0.00 0.00 46.32 4.35
3729 5083 3.798202 CTCCTACATTAGGTGTGGCTTC 58.202 50.000 0.00 0.00 46.32 3.86
3730 5084 3.450904 TCCTACATTAGGTGTGGCTTCT 58.549 45.455 0.00 0.00 46.32 2.85
3731 5085 3.844211 TCCTACATTAGGTGTGGCTTCTT 59.156 43.478 0.00 0.00 46.32 2.52
3732 5086 4.081087 TCCTACATTAGGTGTGGCTTCTTC 60.081 45.833 0.00 0.00 46.32 2.87
3733 5087 4.080863 CCTACATTAGGTGTGGCTTCTTCT 60.081 45.833 0.00 0.00 42.24 2.85
3734 5088 4.373156 ACATTAGGTGTGGCTTCTTCTT 57.627 40.909 0.00 0.00 40.28 2.52
3735 5089 4.729868 ACATTAGGTGTGGCTTCTTCTTT 58.270 39.130 0.00 0.00 40.28 2.52
3736 5090 5.140454 ACATTAGGTGTGGCTTCTTCTTTT 58.860 37.500 0.00 0.00 40.28 2.27
3737 5091 5.598417 ACATTAGGTGTGGCTTCTTCTTTTT 59.402 36.000 0.00 0.00 40.28 1.94
3773 5127 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
3774 5128 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
3775 5129 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
3776 5130 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
3777 5131 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
3783 5137 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3784 5138 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3785 5139 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3786 5140 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3789 5143 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3801 5155 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
3802 5156 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
3803 5157 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
3804 5158 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
3805 5159 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
3806 5160 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
3807 5161 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
3808 5162 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
3809 5163 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
3810 5164 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
3811 5165 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
3812 5166 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
3813 5167 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3814 5168 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3815 5169 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3816 5170 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3817 5171 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3818 5172 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3819 5173 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 2.113807 TGGAGCAGCAGATATGACAGT 58.886 47.619 0.00 0.00 0.00 3.55
173 174 5.546621 TGTTTGCTTGGAACTACTAGACT 57.453 39.130 0.00 0.00 0.00 3.24
211 212 3.325135 GGAGGGAGAGAAAAAGTGTGAGA 59.675 47.826 0.00 0.00 0.00 3.27
262 263 0.884514 TCTGTCGGTTCTGCTCTCAG 59.115 55.000 0.00 0.00 41.67 3.35
300 301 3.429141 CTGCTTCCAGTGCGGCTG 61.429 66.667 0.00 1.55 44.63 4.85
358 359 1.556911 ACAGGCGAGAACCTCATCAAT 59.443 47.619 0.00 0.00 38.26 2.57
381 382 0.108186 AGAATGCTCGATCAACCGCA 60.108 50.000 0.00 0.00 36.75 5.69
478 479 1.660575 GCAGCAGCAGCAACAACAG 60.661 57.895 4.63 0.00 45.49 3.16
577 584 1.154093 CAGTGCAGGCTTGATTGCG 60.154 57.895 0.00 0.00 43.13 4.85
623 630 6.567050 GCTGTACCATTGATTGATTGTGAAT 58.433 36.000 0.00 0.00 0.00 2.57
655 662 6.929606 AGAGCAAAGTACACTAAGAAAATCGT 59.070 34.615 0.00 0.00 0.00 3.73
702 714 4.451096 TGCTTACAACAATCGGAAAGAGTC 59.549 41.667 0.00 0.00 0.00 3.36
740 752 5.160641 TGTTTCTGCTGACAACACTTTTTC 58.839 37.500 13.33 0.00 0.00 2.29
747 759 4.717233 AAACATGTTTCTGCTGACAACA 57.283 36.364 18.13 17.05 34.97 3.33
847 859 8.314751 AGCTAGATATACAGATATTGCGGTTTT 58.685 33.333 0.00 0.00 30.79 2.43
870 882 6.898521 AGGATTAGTAAGTTAGGTCTTCAGCT 59.101 38.462 0.00 0.00 0.00 4.24
953 965 0.249657 GGTTTCCACATTTGCGCCAA 60.250 50.000 4.18 0.00 0.00 4.52
982 994 5.404096 CAACATTTATGCTGCATCAACTGA 58.596 37.500 19.90 0.00 0.00 3.41
1092 1112 9.140286 GTACACGATCTGCAAATATGTACATAT 57.860 33.333 20.49 20.49 40.27 1.78
1095 1115 6.569780 AGTACACGATCTGCAAATATGTACA 58.430 36.000 20.87 0.00 42.05 2.90
1100 1120 6.753180 AGATGAGTACACGATCTGCAAATAT 58.247 36.000 0.00 0.00 0.00 1.28
1106 1126 5.051374 GCTTTTAGATGAGTACACGATCTGC 60.051 44.000 10.14 3.66 0.00 4.26
1143 1163 4.323417 AGCATTGATCGTACAGGAAACAA 58.677 39.130 0.00 0.00 0.00 2.83
1193 1213 3.133003 TGAAGGAGAAGTAGCAGGCATAC 59.867 47.826 0.00 0.00 0.00 2.39
1198 1218 2.828520 TGAGTGAAGGAGAAGTAGCAGG 59.171 50.000 0.00 0.00 0.00 4.85
1398 1421 0.977395 ACAGGGTCAGGTACAGAAGC 59.023 55.000 0.00 0.00 0.00 3.86
1408 1431 3.476552 TGCTCTACAAAAACAGGGTCAG 58.523 45.455 0.00 0.00 0.00 3.51
1535 1559 9.578439 TGATCTTTGCATAGATATAATGACGAG 57.422 33.333 18.16 0.00 35.06 4.18
1544 1568 5.938710 CACTGCCTGATCTTTGCATAGATAT 59.061 40.000 18.16 0.00 35.06 1.63
1654 1678 0.109272 GAGTCCACAAGATCGACGCA 60.109 55.000 0.00 0.00 0.00 5.24
1796 1820 6.477688 GTCGGTTTAATAGCAACAGCAGTATA 59.522 38.462 0.00 0.00 0.00 1.47
1986 2021 5.920193 ATATCACCATCACACCCTTTTTG 57.080 39.130 0.00 0.00 0.00 2.44
2052 2087 1.588674 TTTTGTCATGGTCGTTCGCT 58.411 45.000 0.00 0.00 0.00 4.93
2055 2090 3.813166 TCTCCTTTTTGTCATGGTCGTTC 59.187 43.478 0.00 0.00 0.00 3.95
2073 2108 0.884704 TGCCGTTCAACTGCTTCTCC 60.885 55.000 5.47 0.00 0.00 3.71
2074 2109 0.235926 GTGCCGTTCAACTGCTTCTC 59.764 55.000 5.47 0.00 0.00 2.87
2075 2110 1.166531 GGTGCCGTTCAACTGCTTCT 61.167 55.000 5.47 0.00 0.00 2.85
2109 2144 0.681733 TCACCTCCTCTTGTGAGTGC 59.318 55.000 0.00 0.00 36.62 4.40
2157 2201 4.284490 ACTCTAGGCAACAAGAACAGATGA 59.716 41.667 0.00 0.00 41.41 2.92
2206 2253 2.480587 CCTGCATGCACACCACATAATG 60.481 50.000 18.46 1.92 0.00 1.90
2365 2412 4.436317 GCTTACATTGTTGTCGCGGATTAA 60.436 41.667 6.13 0.00 37.28 1.40
2377 2424 0.679960 GCCGGGGAGCTTACATTGTT 60.680 55.000 2.18 0.00 0.00 2.83
2421 2469 8.960591 CACACTATATTTTGAAATGAAGGGAGT 58.039 33.333 8.31 0.00 0.00 3.85
2422 2470 7.917505 GCACACTATATTTTGAAATGAAGGGAG 59.082 37.037 8.31 3.68 0.00 4.30
2423 2471 7.147915 GGCACACTATATTTTGAAATGAAGGGA 60.148 37.037 8.31 0.00 0.00 4.20
2424 2472 6.980397 GGCACACTATATTTTGAAATGAAGGG 59.020 38.462 0.00 1.18 0.00 3.95
2425 2473 6.980397 GGGCACACTATATTTTGAAATGAAGG 59.020 38.462 0.00 0.00 0.00 3.46
2426 2474 6.692681 CGGGCACACTATATTTTGAAATGAAG 59.307 38.462 0.00 0.28 0.00 3.02
2427 2475 6.559810 CGGGCACACTATATTTTGAAATGAA 58.440 36.000 0.00 0.00 0.00 2.57
2428 2476 5.449862 GCGGGCACACTATATTTTGAAATGA 60.450 40.000 0.00 0.00 0.00 2.57
2429 2477 4.739716 GCGGGCACACTATATTTTGAAATG 59.260 41.667 0.00 0.00 0.00 2.32
2430 2478 4.497340 CGCGGGCACACTATATTTTGAAAT 60.497 41.667 0.00 0.00 0.00 2.17
2431 2479 3.181505 CGCGGGCACACTATATTTTGAAA 60.182 43.478 0.00 0.00 0.00 2.69
2432 2480 2.353269 CGCGGGCACACTATATTTTGAA 59.647 45.455 0.00 0.00 0.00 2.69
2433 2481 1.937223 CGCGGGCACACTATATTTTGA 59.063 47.619 0.00 0.00 0.00 2.69
2434 2482 1.596954 GCGCGGGCACACTATATTTTG 60.597 52.381 20.76 0.00 39.62 2.44
2435 2483 0.661020 GCGCGGGCACACTATATTTT 59.339 50.000 20.76 0.00 39.62 1.82
2436 2484 0.179056 AGCGCGGGCACACTATATTT 60.179 50.000 27.20 0.00 43.41 1.40
2437 2485 0.179056 AAGCGCGGGCACACTATATT 60.179 50.000 27.20 6.36 43.41 1.28
2438 2486 0.600255 GAAGCGCGGGCACACTATAT 60.600 55.000 27.20 0.00 43.41 0.86
2439 2487 1.227147 GAAGCGCGGGCACACTATA 60.227 57.895 27.20 0.00 43.41 1.31
2440 2488 2.511600 GAAGCGCGGGCACACTAT 60.512 61.111 27.20 0.84 43.41 2.12
2441 2489 4.752879 GGAAGCGCGGGCACACTA 62.753 66.667 27.20 0.00 43.41 2.74
2448 2496 4.821589 GACCTCAGGAAGCGCGGG 62.822 72.222 8.83 0.00 0.00 6.13
2449 2497 4.821589 GGACCTCAGGAAGCGCGG 62.822 72.222 8.83 0.00 0.00 6.46
2450 2498 3.589654 TTGGACCTCAGGAAGCGCG 62.590 63.158 0.00 0.00 0.00 6.86
2451 2499 2.035442 GTTGGACCTCAGGAAGCGC 61.035 63.158 0.00 0.00 0.00 5.92
2452 2500 0.035458 AAGTTGGACCTCAGGAAGCG 59.965 55.000 0.00 0.00 0.00 4.68
2453 2501 1.882623 CAAAGTTGGACCTCAGGAAGC 59.117 52.381 0.00 0.00 0.00 3.86
2454 2502 3.142174 GTCAAAGTTGGACCTCAGGAAG 58.858 50.000 0.00 0.00 0.00 3.46
2455 2503 3.208747 GTCAAAGTTGGACCTCAGGAA 57.791 47.619 0.00 0.00 0.00 3.36
2456 2504 2.930826 GTCAAAGTTGGACCTCAGGA 57.069 50.000 0.00 0.00 0.00 3.86
2463 2511 8.145122 TGGTTAAATTTATGGTCAAAGTTGGAC 58.855 33.333 1.31 1.31 29.44 4.02
2464 2512 8.251383 TGGTTAAATTTATGGTCAAAGTTGGA 57.749 30.769 0.00 0.00 29.44 3.53
2465 2513 8.769891 GTTGGTTAAATTTATGGTCAAAGTTGG 58.230 33.333 0.00 0.00 29.44 3.77
2466 2514 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
2467 2515 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
2468 2516 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
2469 2517 8.804688 TTCGTTGGTTAAATTTATGGTCAAAG 57.195 30.769 0.00 4.88 0.00 2.77
2470 2518 9.765795 AATTCGTTGGTTAAATTTATGGTCAAA 57.234 25.926 0.00 0.00 0.00 2.69
2471 2519 9.413048 GAATTCGTTGGTTAAATTTATGGTCAA 57.587 29.630 0.00 0.00 0.00 3.18
2472 2520 8.577296 TGAATTCGTTGGTTAAATTTATGGTCA 58.423 29.630 0.00 0.00 0.00 4.02
2473 2521 8.856247 GTGAATTCGTTGGTTAAATTTATGGTC 58.144 33.333 0.00 0.00 0.00 4.02
2474 2522 8.581578 AGTGAATTCGTTGGTTAAATTTATGGT 58.418 29.630 0.00 0.00 0.00 3.55
2475 2523 8.859156 CAGTGAATTCGTTGGTTAAATTTATGG 58.141 33.333 0.00 0.00 0.00 2.74
2476 2524 8.859156 CCAGTGAATTCGTTGGTTAAATTTATG 58.141 33.333 16.15 0.00 0.00 1.90
2477 2525 8.581578 ACCAGTGAATTCGTTGGTTAAATTTAT 58.418 29.630 21.60 3.21 40.94 1.40
2478 2526 7.942990 ACCAGTGAATTCGTTGGTTAAATTTA 58.057 30.769 21.60 0.00 40.94 1.40
2479 2527 6.811954 ACCAGTGAATTCGTTGGTTAAATTT 58.188 32.000 21.60 0.00 40.94 1.82
2480 2528 6.399639 ACCAGTGAATTCGTTGGTTAAATT 57.600 33.333 21.60 4.89 40.94 1.82
2481 2529 7.696992 ATACCAGTGAATTCGTTGGTTAAAT 57.303 32.000 28.22 17.98 40.94 1.40
2482 2530 8.505625 GTTATACCAGTGAATTCGTTGGTTAAA 58.494 33.333 28.22 21.44 40.94 1.52
2483 2531 7.879160 AGTTATACCAGTGAATTCGTTGGTTAA 59.121 33.333 28.22 22.59 40.94 2.01
2484 2532 7.388437 AGTTATACCAGTGAATTCGTTGGTTA 58.612 34.615 28.22 19.75 40.94 2.85
2485 2533 6.235664 AGTTATACCAGTGAATTCGTTGGTT 58.764 36.000 28.22 20.44 40.94 3.67
2486 2534 5.801380 AGTTATACCAGTGAATTCGTTGGT 58.199 37.500 26.97 26.97 45.42 3.67
2487 2535 6.737254 AAGTTATACCAGTGAATTCGTTGG 57.263 37.500 20.56 20.56 36.76 3.77
2488 2536 7.060633 GCAAAAGTTATACCAGTGAATTCGTTG 59.939 37.037 0.04 1.67 0.00 4.10
2489 2537 7.040686 AGCAAAAGTTATACCAGTGAATTCGTT 60.041 33.333 0.04 0.00 0.00 3.85
2490 2538 6.430000 AGCAAAAGTTATACCAGTGAATTCGT 59.570 34.615 0.04 0.00 0.00 3.85
2491 2539 6.842163 AGCAAAAGTTATACCAGTGAATTCG 58.158 36.000 0.04 0.00 0.00 3.34
2492 2540 7.251281 GGAGCAAAAGTTATACCAGTGAATTC 58.749 38.462 0.00 0.00 0.00 2.17
2493 2541 6.152831 GGGAGCAAAAGTTATACCAGTGAATT 59.847 38.462 0.00 0.00 0.00 2.17
2494 2542 5.652452 GGGAGCAAAAGTTATACCAGTGAAT 59.348 40.000 0.00 0.00 0.00 2.57
2495 2543 5.007682 GGGAGCAAAAGTTATACCAGTGAA 58.992 41.667 0.00 0.00 0.00 3.18
2496 2544 4.585879 GGGAGCAAAAGTTATACCAGTGA 58.414 43.478 0.00 0.00 0.00 3.41
2497 2545 3.374058 CGGGAGCAAAAGTTATACCAGTG 59.626 47.826 0.00 0.00 0.00 3.66
2498 2546 3.606687 CGGGAGCAAAAGTTATACCAGT 58.393 45.455 0.00 0.00 0.00 4.00
2521 2569 2.805353 CCAACGAGACCGACTGCG 60.805 66.667 0.00 0.00 39.50 5.18
2522 2570 0.038892 TAACCAACGAGACCGACTGC 60.039 55.000 0.00 0.00 39.50 4.40
2523 2571 2.427232 TTAACCAACGAGACCGACTG 57.573 50.000 0.00 0.00 39.50 3.51
2524 2572 3.672767 ATTTAACCAACGAGACCGACT 57.327 42.857 0.00 0.00 39.50 4.18
2525 2573 4.737353 AAATTTAACCAACGAGACCGAC 57.263 40.909 0.00 0.00 39.50 4.79
2526 2574 5.352016 CCATAAATTTAACCAACGAGACCGA 59.648 40.000 1.21 0.00 39.50 4.69
2527 2575 5.122711 ACCATAAATTTAACCAACGAGACCG 59.877 40.000 1.21 0.00 42.50 4.79
2528 2576 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
2529 2577 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
2530 2578 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
2531 2579 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
2532 2580 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
2533 2581 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
2534 2582 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
2536 2584 9.757227 CTTCAACTTTGACCATAAATTTAACCA 57.243 29.630 1.21 0.00 36.83 3.67
2537 2585 8.708742 GCTTCAACTTTGACCATAAATTTAACC 58.291 33.333 1.21 0.00 36.83 2.85
2538 2586 9.255304 TGCTTCAACTTTGACCATAAATTTAAC 57.745 29.630 1.21 0.00 36.83 2.01
2539 2587 9.255304 GTGCTTCAACTTTGACCATAAATTTAA 57.745 29.630 1.21 0.00 36.83 1.52
2540 2588 7.593273 CGTGCTTCAACTTTGACCATAAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
2541 2589 6.420604 CGTGCTTCAACTTTGACCATAAATTT 59.579 34.615 0.00 0.00 36.83 1.82
2542 2590 5.920273 CGTGCTTCAACTTTGACCATAAATT 59.080 36.000 0.00 0.00 36.83 1.82
2543 2591 5.460646 CGTGCTTCAACTTTGACCATAAAT 58.539 37.500 0.00 0.00 36.83 1.40
2544 2592 4.261405 CCGTGCTTCAACTTTGACCATAAA 60.261 41.667 0.00 0.00 36.83 1.40
2545 2593 3.252215 CCGTGCTTCAACTTTGACCATAA 59.748 43.478 0.00 0.00 36.83 1.90
2546 2594 2.811431 CCGTGCTTCAACTTTGACCATA 59.189 45.455 0.00 0.00 36.83 2.74
2547 2595 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
2548 2596 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
2549 2597 0.310854 CCCGTGCTTCAACTTTGACC 59.689 55.000 0.00 0.00 36.83 4.02
2550 2598 1.305201 TCCCGTGCTTCAACTTTGAC 58.695 50.000 0.00 0.00 36.83 3.18
2551 2599 2.045561 TTCCCGTGCTTCAACTTTGA 57.954 45.000 0.00 0.00 34.92 2.69
2552 2600 3.751175 TCTATTCCCGTGCTTCAACTTTG 59.249 43.478 0.00 0.00 0.00 2.77
2553 2601 4.003648 CTCTATTCCCGTGCTTCAACTTT 58.996 43.478 0.00 0.00 0.00 2.66
2554 2602 3.600388 CTCTATTCCCGTGCTTCAACTT 58.400 45.455 0.00 0.00 0.00 2.66
2555 2603 2.093447 CCTCTATTCCCGTGCTTCAACT 60.093 50.000 0.00 0.00 0.00 3.16
2556 2604 2.093658 TCCTCTATTCCCGTGCTTCAAC 60.094 50.000 0.00 0.00 0.00 3.18
2557 2605 2.184533 TCCTCTATTCCCGTGCTTCAA 58.815 47.619 0.00 0.00 0.00 2.69
2558 2606 1.860641 TCCTCTATTCCCGTGCTTCA 58.139 50.000 0.00 0.00 0.00 3.02
2559 2607 2.827652 CTTCCTCTATTCCCGTGCTTC 58.172 52.381 0.00 0.00 0.00 3.86
2560 2608 1.134371 GCTTCCTCTATTCCCGTGCTT 60.134 52.381 0.00 0.00 0.00 3.91
2561 2609 0.466124 GCTTCCTCTATTCCCGTGCT 59.534 55.000 0.00 0.00 0.00 4.40
2562 2610 0.178068 TGCTTCCTCTATTCCCGTGC 59.822 55.000 0.00 0.00 0.00 5.34
2563 2611 1.482593 AGTGCTTCCTCTATTCCCGTG 59.517 52.381 0.00 0.00 0.00 4.94
2564 2612 1.867363 AGTGCTTCCTCTATTCCCGT 58.133 50.000 0.00 0.00 0.00 5.28
2565 2613 5.723672 TTATAGTGCTTCCTCTATTCCCG 57.276 43.478 0.00 0.00 31.97 5.14
2566 2614 7.391833 CCAAATTATAGTGCTTCCTCTATTCCC 59.608 40.741 0.00 0.00 31.97 3.97
2567 2615 8.157476 TCCAAATTATAGTGCTTCCTCTATTCC 58.843 37.037 0.00 0.00 31.97 3.01
2568 2616 9.561069 TTCCAAATTATAGTGCTTCCTCTATTC 57.439 33.333 0.00 0.00 31.97 1.75
2570 2618 9.512588 CATTCCAAATTATAGTGCTTCCTCTAT 57.487 33.333 0.00 0.00 33.61 1.98
2571 2619 8.713971 TCATTCCAAATTATAGTGCTTCCTCTA 58.286 33.333 0.00 0.00 0.00 2.43
2572 2620 7.577303 TCATTCCAAATTATAGTGCTTCCTCT 58.423 34.615 0.00 0.00 0.00 3.69
2573 2621 7.807977 TCATTCCAAATTATAGTGCTTCCTC 57.192 36.000 0.00 0.00 0.00 3.71
2574 2622 7.286316 CCTTCATTCCAAATTATAGTGCTTCCT 59.714 37.037 0.00 0.00 0.00 3.36
2575 2623 7.428826 CCTTCATTCCAAATTATAGTGCTTCC 58.571 38.462 0.00 0.00 0.00 3.46
2576 2624 7.285401 TCCCTTCATTCCAAATTATAGTGCTTC 59.715 37.037 0.00 0.00 0.00 3.86
2577 2625 7.125391 TCCCTTCATTCCAAATTATAGTGCTT 58.875 34.615 0.00 0.00 0.00 3.91
2578 2626 6.672593 TCCCTTCATTCCAAATTATAGTGCT 58.327 36.000 0.00 0.00 0.00 4.40
2579 2627 6.547510 ACTCCCTTCATTCCAAATTATAGTGC 59.452 38.462 0.00 0.00 0.00 4.40
2580 2628 9.799106 ATACTCCCTTCATTCCAAATTATAGTG 57.201 33.333 0.00 0.00 0.00 2.74
2584 2632 9.525826 GATGATACTCCCTTCATTCCAAATTAT 57.474 33.333 0.00 0.00 32.84 1.28
2585 2633 7.944554 GGATGATACTCCCTTCATTCCAAATTA 59.055 37.037 0.00 0.00 32.84 1.40
2586 2634 6.779539 GGATGATACTCCCTTCATTCCAAATT 59.220 38.462 0.00 0.00 32.84 1.82
2587 2635 6.126097 TGGATGATACTCCCTTCATTCCAAAT 60.126 38.462 0.00 0.00 32.84 2.32
2588 2636 5.193527 TGGATGATACTCCCTTCATTCCAAA 59.806 40.000 0.00 0.00 32.84 3.28
2589 2637 4.726317 TGGATGATACTCCCTTCATTCCAA 59.274 41.667 0.00 0.00 32.84 3.53
2590 2638 4.306391 TGGATGATACTCCCTTCATTCCA 58.694 43.478 0.00 0.00 32.84 3.53
2591 2639 4.982241 TGGATGATACTCCCTTCATTCC 57.018 45.455 0.00 0.00 32.84 3.01
2592 2640 5.174395 CGATGGATGATACTCCCTTCATTC 58.826 45.833 0.00 0.00 32.84 2.67
2593 2641 4.019860 CCGATGGATGATACTCCCTTCATT 60.020 45.833 0.00 0.00 32.84 2.57
2594 2642 3.517100 CCGATGGATGATACTCCCTTCAT 59.483 47.826 0.00 0.00 35.33 2.57
2595 2643 2.899900 CCGATGGATGATACTCCCTTCA 59.100 50.000 0.00 0.00 34.12 3.02
2596 2644 2.234908 CCCGATGGATGATACTCCCTTC 59.765 54.545 0.00 0.00 34.12 3.46
2597 2645 2.260822 CCCGATGGATGATACTCCCTT 58.739 52.381 0.00 0.00 34.12 3.95
2598 2646 1.553417 CCCCGATGGATGATACTCCCT 60.553 57.143 0.00 0.00 35.39 4.20
2599 2647 0.905357 CCCCGATGGATGATACTCCC 59.095 60.000 0.00 0.00 35.39 4.30
2600 2648 1.645710 ACCCCGATGGATGATACTCC 58.354 55.000 0.00 0.00 38.00 3.85
2601 2649 3.833070 ACTTACCCCGATGGATGATACTC 59.167 47.826 0.00 0.00 38.00 2.59
2602 2650 3.578716 CACTTACCCCGATGGATGATACT 59.421 47.826 0.00 0.00 38.00 2.12
2603 2651 3.306780 CCACTTACCCCGATGGATGATAC 60.307 52.174 0.00 0.00 38.00 2.24
2643 2691 2.158842 CCTGCAAACCAAACCATTCCAA 60.159 45.455 0.00 0.00 0.00 3.53
2738 2786 4.658786 AGGTCCGGGAGTGGGCTT 62.659 66.667 0.00 0.00 32.87 4.35
2813 2861 1.546476 AGTAGTCTTCAGCCGTCAAGG 59.454 52.381 0.00 0.00 44.97 3.61
2839 2887 4.825422 ACAGATGAATCGACATGTTCTGT 58.175 39.130 17.37 17.37 42.15 3.41
2840 2888 5.791367 AACAGATGAATCGACATGTTCTG 57.209 39.130 16.31 16.31 0.00 3.02
2841 2889 6.808008 AAAACAGATGAATCGACATGTTCT 57.192 33.333 0.00 0.00 0.00 3.01
2842 2890 6.183359 GCAAAAACAGATGAATCGACATGTTC 60.183 38.462 0.00 0.00 0.00 3.18
2843 2891 5.630680 GCAAAAACAGATGAATCGACATGTT 59.369 36.000 0.00 0.00 0.00 2.71
2844 2892 5.048504 AGCAAAAACAGATGAATCGACATGT 60.049 36.000 0.00 0.00 0.00 3.21
2845 2893 5.396484 AGCAAAAACAGATGAATCGACATG 58.604 37.500 0.00 0.00 0.00 3.21
2867 2915 2.185310 AACAGAAGGGCCTGCCGTAG 62.185 60.000 6.92 0.00 37.68 3.51
2869 2917 2.640581 AAAACAGAAGGGCCTGCCGT 62.641 55.000 6.92 0.00 37.68 5.68
2899 2947 1.978617 CCCCATTGTGCAGTCCCAC 60.979 63.158 0.00 0.00 36.28 4.61
2917 2965 3.119495 ACAGCTGAACAACAACTTCCAAC 60.119 43.478 23.35 0.00 0.00 3.77
2930 2978 4.900635 TTGAGAAGGAAAACAGCTGAAC 57.099 40.909 23.35 8.10 0.00 3.18
2931 2979 5.505173 CTTTGAGAAGGAAAACAGCTGAA 57.495 39.130 23.35 0.00 0.00 3.02
2944 2992 4.537135 TGCTACACCTACCTTTGAGAAG 57.463 45.455 0.00 0.00 0.00 2.85
2946 2994 4.777896 AGAATGCTACACCTACCTTTGAGA 59.222 41.667 0.00 0.00 0.00 3.27
2950 2998 5.003804 CACAAGAATGCTACACCTACCTTT 58.996 41.667 0.00 0.00 0.00 3.11
2971 3019 5.653507 TGATATTTGCTTCATCCTTTGCAC 58.346 37.500 0.00 0.00 35.01 4.57
2976 3024 7.228906 CAGTCTCATGATATTTGCTTCATCCTT 59.771 37.037 0.00 0.00 30.24 3.36
2977 3025 6.711194 CAGTCTCATGATATTTGCTTCATCCT 59.289 38.462 0.00 0.00 30.24 3.24
2979 3027 7.725818 TCAGTCTCATGATATTTGCTTCATC 57.274 36.000 0.00 0.00 30.24 2.92
2981 3029 9.617523 TTATTCAGTCTCATGATATTTGCTTCA 57.382 29.630 0.00 0.00 0.00 3.02
3000 3048 9.055248 CGTTATCTGAAAAGCAAACTTATTCAG 57.945 33.333 16.24 16.24 43.38 3.02
3019 3067 2.032620 CTGGGCACTACTCCGTTATCT 58.967 52.381 0.00 0.00 0.00 1.98
3108 3188 4.822685 AGATGAGAATCTGTGCAAGTCT 57.177 40.909 0.00 0.00 34.92 3.24
3144 3224 3.007635 GACAAGTAATTTGGGACGGAGG 58.992 50.000 0.00 0.00 41.25 4.30
3149 3229 8.793592 ACAAATCTAAGACAAGTAATTTGGGAC 58.206 33.333 9.60 0.00 41.25 4.46
3160 3240 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
3162 3242 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
3163 3243 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
3164 3244 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
3194 3274 2.998097 GCCTACTGCATCCACCCA 59.002 61.111 0.00 0.00 40.77 4.51
3211 4481 5.824429 TCAGATTCAGAGCAAAAACAGTTG 58.176 37.500 0.00 0.00 0.00 3.16
3217 4487 5.319453 ACCTGATCAGATTCAGAGCAAAAA 58.681 37.500 24.62 0.00 44.88 1.94
3221 4491 4.285020 AGTACCTGATCAGATTCAGAGCA 58.715 43.478 24.62 0.00 44.88 4.26
3225 4495 4.648762 ACCTGAGTACCTGATCAGATTCAG 59.351 45.833 24.62 22.39 44.68 3.02
3226 4496 4.614475 ACCTGAGTACCTGATCAGATTCA 58.386 43.478 24.62 15.30 44.68 2.57
3243 4513 0.687920 TGGATTGCCAACGTACCTGA 59.312 50.000 0.00 0.00 42.49 3.86
3244 4514 3.241493 TGGATTGCCAACGTACCTG 57.759 52.632 0.00 0.00 42.49 4.00
3325 4668 8.538701 TGGCTAAAATGAATGACACCATAAAAT 58.461 29.630 0.00 0.00 31.59 1.82
3336 4679 7.388437 AGCTTTTGATTGGCTAAAATGAATGA 58.612 30.769 0.00 0.00 34.31 2.57
3377 4720 1.956477 CTTTTTCCTGACAGGTGGGTG 59.044 52.381 21.06 6.76 36.53 4.61
3383 4726 5.532406 TGTGATCTTTCTTTTTCCTGACAGG 59.468 40.000 15.99 15.99 36.46 4.00
3418 4761 6.443527 ACCTTGGTGGCCTTTTATTCATTTAT 59.556 34.615 3.32 0.00 40.22 1.40
3446 4789 7.057894 ACACCAATGTCAGGTCTAAAACTTAA 58.942 34.615 0.00 0.00 37.23 1.85
3475 4818 6.725834 AGAGCCTCAAATAAATCCAGGAAAAA 59.274 34.615 0.00 0.00 0.00 1.94
3476 4819 6.256053 AGAGCCTCAAATAAATCCAGGAAAA 58.744 36.000 0.00 0.00 0.00 2.29
3481 4824 5.007136 GTCGAAGAGCCTCAAATAAATCCAG 59.993 44.000 0.00 0.00 36.95 3.86
3513 4856 2.457366 ACATCGTCTCCCACTGAAAC 57.543 50.000 0.00 0.00 0.00 2.78
3514 4857 3.399330 GAAACATCGTCTCCCACTGAAA 58.601 45.455 0.00 0.00 0.00 2.69
3527 4870 4.328712 TCATTACACATGACGGAAACATCG 59.671 41.667 0.00 0.00 0.00 3.84
3561 4915 6.917533 AGAGATTGAGCCAACACATTTTAAG 58.082 36.000 0.00 0.00 0.00 1.85
3571 4925 5.053145 ACATATTCGAGAGATTGAGCCAAC 58.947 41.667 0.00 0.00 41.60 3.77
3573 4927 4.944619 ACATATTCGAGAGATTGAGCCA 57.055 40.909 0.00 0.00 41.60 4.75
3574 4928 7.897575 ATAAACATATTCGAGAGATTGAGCC 57.102 36.000 0.00 0.00 41.60 4.70
3596 4950 9.660544 ATGAGCACATACATACATATCCCTATA 57.339 33.333 0.00 0.00 34.71 1.31
3597 4951 7.978099 TGAGCACATACATACATATCCCTAT 57.022 36.000 0.00 0.00 0.00 2.57
3598 4952 7.978099 ATGAGCACATACATACATATCCCTA 57.022 36.000 0.00 0.00 34.71 3.53
3599 4953 6.881067 ATGAGCACATACATACATATCCCT 57.119 37.500 0.00 0.00 34.71 4.20
3600 4954 7.147655 ACCTATGAGCACATACATACATATCCC 60.148 40.741 0.00 0.00 37.87 3.85
3601 4955 7.786030 ACCTATGAGCACATACATACATATCC 58.214 38.462 0.00 0.00 37.87 2.59
3604 4958 9.474313 TCATACCTATGAGCACATACATACATA 57.526 33.333 0.00 0.00 37.76 2.29
3605 4959 8.366359 TCATACCTATGAGCACATACATACAT 57.634 34.615 0.00 0.00 37.76 2.29
3606 4960 7.775053 TCATACCTATGAGCACATACATACA 57.225 36.000 0.00 0.00 37.76 2.29
3619 4973 9.981114 CACAAACACATATACTCATACCTATGA 57.019 33.333 0.00 0.00 40.19 2.15
3620 4974 9.764363 ACACAAACACATATACTCATACCTATG 57.236 33.333 0.00 0.00 35.04 2.23
3621 4975 9.764363 CACACAAACACATATACTCATACCTAT 57.236 33.333 0.00 0.00 0.00 2.57
3622 4976 8.755028 ACACACAAACACATATACTCATACCTA 58.245 33.333 0.00 0.00 0.00 3.08
3623 4977 7.620880 ACACACAAACACATATACTCATACCT 58.379 34.615 0.00 0.00 0.00 3.08
3624 4978 7.843490 ACACACAAACACATATACTCATACC 57.157 36.000 0.00 0.00 0.00 2.73
3627 4981 9.317936 CTCATACACACAAACACATATACTCAT 57.682 33.333 0.00 0.00 0.00 2.90
3628 4982 8.311109 ACTCATACACACAAACACATATACTCA 58.689 33.333 0.00 0.00 0.00 3.41
3629 4983 8.703604 ACTCATACACACAAACACATATACTC 57.296 34.615 0.00 0.00 0.00 2.59
3634 4988 9.040939 GCATATACTCATACACACAAACACATA 57.959 33.333 0.00 0.00 0.00 2.29
3635 4989 7.552330 TGCATATACTCATACACACAAACACAT 59.448 33.333 0.00 0.00 0.00 3.21
3636 4990 6.876257 TGCATATACTCATACACACAAACACA 59.124 34.615 0.00 0.00 0.00 3.72
3637 4991 7.180079 GTGCATATACTCATACACACAAACAC 58.820 38.462 0.00 0.00 31.00 3.32
3638 4992 6.315144 GGTGCATATACTCATACACACAAACA 59.685 38.462 0.00 0.00 31.71 2.83
3639 4993 6.509517 CGGTGCATATACTCATACACACAAAC 60.510 42.308 0.00 0.00 31.71 2.93
3640 4994 5.522097 CGGTGCATATACTCATACACACAAA 59.478 40.000 0.00 0.00 31.71 2.83
3641 4995 5.047188 CGGTGCATATACTCATACACACAA 58.953 41.667 0.00 0.00 31.71 3.33
3642 4996 4.500716 CCGGTGCATATACTCATACACACA 60.501 45.833 0.00 0.00 31.71 3.72
3643 4997 3.987868 CCGGTGCATATACTCATACACAC 59.012 47.826 0.00 0.00 0.00 3.82
3644 4998 3.639561 ACCGGTGCATATACTCATACACA 59.360 43.478 6.12 0.00 0.00 3.72
3645 4999 3.987868 CACCGGTGCATATACTCATACAC 59.012 47.826 24.02 0.00 0.00 2.90
3646 5000 3.006430 CCACCGGTGCATATACTCATACA 59.994 47.826 29.75 0.00 0.00 2.29
3647 5001 3.257375 TCCACCGGTGCATATACTCATAC 59.743 47.826 29.75 0.00 0.00 2.39
3648 5002 3.502356 TCCACCGGTGCATATACTCATA 58.498 45.455 29.75 0.00 0.00 2.15
3649 5003 2.325484 TCCACCGGTGCATATACTCAT 58.675 47.619 29.75 0.00 0.00 2.90
3650 5004 1.783071 TCCACCGGTGCATATACTCA 58.217 50.000 29.75 0.45 0.00 3.41
3651 5005 2.902705 TTCCACCGGTGCATATACTC 57.097 50.000 29.75 0.00 0.00 2.59
3652 5006 3.637911 TTTTCCACCGGTGCATATACT 57.362 42.857 29.75 0.00 0.00 2.12
3653 5007 3.880490 TGATTTTCCACCGGTGCATATAC 59.120 43.478 29.75 17.50 0.00 1.47
3654 5008 4.157849 TGATTTTCCACCGGTGCATATA 57.842 40.909 29.75 12.63 0.00 0.86
3655 5009 3.011566 TGATTTTCCACCGGTGCATAT 57.988 42.857 29.75 17.73 0.00 1.78
3656 5010 2.490115 GTTGATTTTCCACCGGTGCATA 59.510 45.455 29.75 13.61 0.00 3.14
3657 5011 1.272212 GTTGATTTTCCACCGGTGCAT 59.728 47.619 29.75 16.74 0.00 3.96
3658 5012 0.671251 GTTGATTTTCCACCGGTGCA 59.329 50.000 29.75 12.97 0.00 4.57
3659 5013 0.958822 AGTTGATTTTCCACCGGTGC 59.041 50.000 29.75 14.67 0.00 5.01
3660 5014 2.030274 GGAAGTTGATTTTCCACCGGTG 60.030 50.000 28.26 28.26 42.93 4.94
3661 5015 2.158519 AGGAAGTTGATTTTCCACCGGT 60.159 45.455 0.00 0.00 45.28 5.28
3662 5016 2.488153 GAGGAAGTTGATTTTCCACCGG 59.512 50.000 0.00 0.00 45.28 5.28
3663 5017 3.412386 AGAGGAAGTTGATTTTCCACCG 58.588 45.455 6.77 0.00 45.28 4.94
3664 5018 5.183331 GGTAAGAGGAAGTTGATTTTCCACC 59.817 44.000 6.77 2.07 45.28 4.61
3665 5019 5.768164 TGGTAAGAGGAAGTTGATTTTCCAC 59.232 40.000 6.77 0.69 45.28 4.02
3666 5020 5.947663 TGGTAAGAGGAAGTTGATTTTCCA 58.052 37.500 6.77 0.00 45.28 3.53
3667 5021 6.434340 ACATGGTAAGAGGAAGTTGATTTTCC 59.566 38.462 0.00 0.00 43.59 3.13
3668 5022 7.308435 CACATGGTAAGAGGAAGTTGATTTTC 58.692 38.462 0.00 0.00 0.00 2.29
3669 5023 6.294731 GCACATGGTAAGAGGAAGTTGATTTT 60.295 38.462 0.00 0.00 0.00 1.82
3670 5024 5.183904 GCACATGGTAAGAGGAAGTTGATTT 59.816 40.000 0.00 0.00 0.00 2.17
3671 5025 4.702131 GCACATGGTAAGAGGAAGTTGATT 59.298 41.667 0.00 0.00 0.00 2.57
3672 5026 4.265073 GCACATGGTAAGAGGAAGTTGAT 58.735 43.478 0.00 0.00 0.00 2.57
3673 5027 3.559171 GGCACATGGTAAGAGGAAGTTGA 60.559 47.826 0.00 0.00 0.00 3.18
3674 5028 2.749621 GGCACATGGTAAGAGGAAGTTG 59.250 50.000 0.00 0.00 0.00 3.16
3675 5029 2.644798 AGGCACATGGTAAGAGGAAGTT 59.355 45.455 0.00 0.00 0.00 2.66
3676 5030 2.026822 CAGGCACATGGTAAGAGGAAGT 60.027 50.000 0.00 0.00 0.00 3.01
3677 5031 2.026822 ACAGGCACATGGTAAGAGGAAG 60.027 50.000 0.00 0.00 0.00 3.46
3678 5032 1.985159 ACAGGCACATGGTAAGAGGAA 59.015 47.619 0.00 0.00 0.00 3.36
3679 5033 1.656587 ACAGGCACATGGTAAGAGGA 58.343 50.000 0.00 0.00 0.00 3.71
3680 5034 2.086869 CAACAGGCACATGGTAAGAGG 58.913 52.381 0.00 0.00 0.00 3.69
3681 5035 2.485426 CACAACAGGCACATGGTAAGAG 59.515 50.000 0.00 0.00 0.00 2.85
3682 5036 2.158682 ACACAACAGGCACATGGTAAGA 60.159 45.455 0.00 0.00 0.00 2.10
3683 5037 2.030893 CACACAACAGGCACATGGTAAG 60.031 50.000 0.00 0.00 0.00 2.34
3684 5038 1.952990 CACACAACAGGCACATGGTAA 59.047 47.619 0.00 0.00 0.00 2.85
3685 5039 1.603456 CACACAACAGGCACATGGTA 58.397 50.000 0.00 0.00 0.00 3.25
3686 5040 1.737355 GCACACAACAGGCACATGGT 61.737 55.000 0.00 0.00 0.00 3.55
3687 5041 1.007038 GCACACAACAGGCACATGG 60.007 57.895 0.00 0.00 0.00 3.66
3688 5042 1.069022 GTAGCACACAACAGGCACATG 60.069 52.381 0.00 0.00 0.00 3.21
3689 5043 1.202806 AGTAGCACACAACAGGCACAT 60.203 47.619 0.00 0.00 0.00 3.21
3690 5044 0.180171 AGTAGCACACAACAGGCACA 59.820 50.000 0.00 0.00 0.00 4.57
3691 5045 0.868406 GAGTAGCACACAACAGGCAC 59.132 55.000 0.00 0.00 0.00 5.01
3692 5046 0.250295 GGAGTAGCACACAACAGGCA 60.250 55.000 0.00 0.00 0.00 4.75
3693 5047 0.035458 AGGAGTAGCACACAACAGGC 59.965 55.000 0.00 0.00 0.00 4.85
3694 5048 2.299013 TGTAGGAGTAGCACACAACAGG 59.701 50.000 0.00 0.00 0.00 4.00
3695 5049 3.660501 TGTAGGAGTAGCACACAACAG 57.339 47.619 0.00 0.00 0.00 3.16
3696 5050 4.617253 AATGTAGGAGTAGCACACAACA 57.383 40.909 0.00 0.00 0.00 3.33
3702 5056 7.914079 GCCACACCTAATGTAGGAGTAGCAC 62.914 52.000 14.14 0.00 46.97 4.40
3703 5057 5.954223 GCCACACCTAATGTAGGAGTAGCA 61.954 50.000 14.14 0.00 46.97 3.49
3711 5065 5.091261 AGAAGAAGCCACACCTAATGTAG 57.909 43.478 0.00 0.00 40.64 2.74
3712 5066 5.499004 AAGAAGAAGCCACACCTAATGTA 57.501 39.130 0.00 0.00 40.64 2.29
3713 5067 4.373156 AAGAAGAAGCCACACCTAATGT 57.627 40.909 0.00 0.00 44.81 2.71
3714 5068 5.712152 AAAAGAAGAAGCCACACCTAATG 57.288 39.130 0.00 0.00 0.00 1.90
3750 5104 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
3751 5105 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
3752 5106 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
3753 5107 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
3754 5108 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
3755 5109 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
3756 5110 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
3757 5111 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
3758 5112 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
3759 5113 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
3784 5138 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
3785 5139 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
3786 5140 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
3787 5141 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
3788 5142 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
3789 5143 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
3790 5144 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
3791 5145 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
3792 5146 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
3793 5147 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
3794 5148 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
3795 5149 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
3796 5150 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3797 5151 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3798 5152 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3799 5153 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3800 5154 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3801 5155 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3802 5156 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3803 5157 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.