Multiple sequence alignment - TraesCS1A01G249900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G249900 chr1A 100.000 4997 0 0 1 4997 441834270 441839266 0.000000e+00 9228
1 TraesCS1A01G249900 chr1A 96.273 483 17 1 1 483 23066586 23067067 0.000000e+00 791
2 TraesCS1A01G249900 chr1A 94.595 185 9 1 523 706 97849628 97849444 8.190000e-73 285
3 TraesCS1A01G249900 chr1A 88.830 188 13 8 523 706 418096954 418097137 1.810000e-54 224
4 TraesCS1A01G249900 chr1A 87.978 183 13 8 998 1176 441797782 441797959 1.820000e-49 207
5 TraesCS1A01G249900 chr1A 89.222 167 14 3 998 1164 441768098 441768260 6.560000e-49 206
6 TraesCS1A01G249900 chr1A 83.333 204 31 3 1538 1739 441768870 441769072 8.540000e-43 185
7 TraesCS1A01G249900 chr1A 82.192 219 36 3 1541 1758 441798591 441798807 8.540000e-43 185
8 TraesCS1A01G249900 chr1A 100.000 58 0 0 2846 2903 441837080 441837137 1.900000e-19 108
9 TraesCS1A01G249900 chr1A 100.000 58 0 0 2811 2868 441837115 441837172 1.900000e-19 108
10 TraesCS1A01G249900 chr3A 95.771 733 22 3 2907 3638 437990607 437989883 0.000000e+00 1173
11 TraesCS1A01G249900 chr3A 97.517 604 15 0 4206 4809 742374404 742373801 0.000000e+00 1033
12 TraesCS1A01G249900 chr3A 94.224 554 31 1 4256 4809 584003553 584003001 0.000000e+00 845
13 TraesCS1A01G249900 chr3A 86.476 525 39 3 2907 3425 572542460 572542958 9.460000e-152 547
14 TraesCS1A01G249900 chr3A 97.396 192 5 0 4806 4997 742371309 742371118 1.340000e-85 327
15 TraesCS1A01G249900 chr3A 94.271 192 11 0 4806 4997 584000501 584000310 1.360000e-75 294
16 TraesCS1A01G249900 chr3A 90.950 221 15 3 3423 3638 572548723 572548943 4.890000e-75 292
17 TraesCS1A01G249900 chr3A 82.796 186 23 7 3461 3642 545282782 545282602 1.860000e-34 158
18 TraesCS1A01G249900 chr3A 96.104 77 3 0 2906 2982 545289939 545289863 5.250000e-25 126
19 TraesCS1A01G249900 chr2A 98.675 604 7 1 4206 4809 770268896 770269498 0.000000e+00 1070
20 TraesCS1A01G249900 chr2A 98.020 606 12 0 4204 4809 526736558 526735953 0.000000e+00 1053
21 TraesCS1A01G249900 chr2A 98.179 604 10 1 4206 4809 770281073 770281675 0.000000e+00 1053
22 TraesCS1A01G249900 chr2A 94.203 483 27 1 1 482 115806080 115805598 0.000000e+00 736
23 TraesCS1A01G249900 chr2A 83.196 726 77 22 2946 3641 640273976 640273266 1.530000e-174 623
24 TraesCS1A01G249900 chr2A 97.917 192 4 0 4806 4997 526733394 526733203 2.880000e-87 333
25 TraesCS1A01G249900 chr2A 95.455 198 9 0 4800 4997 770284177 770284374 2.900000e-82 316
26 TraesCS1A01G249900 chr1D 86.887 938 70 27 1956 2868 342167947 342168856 0.000000e+00 1002
27 TraesCS1A01G249900 chr1D 93.110 566 29 7 3640 4205 342168851 342169406 0.000000e+00 821
28 TraesCS1A01G249900 chr1D 85.020 761 70 15 2907 3638 474732842 474732097 0.000000e+00 734
29 TraesCS1A01G249900 chr1D 80.546 586 43 28 741 1271 342165546 342166115 7.850000e-103 385
30 TraesCS1A01G249900 chr1D 96.602 206 7 0 1534 1739 342166286 342166491 4.790000e-90 342
31 TraesCS1A01G249900 chr1D 88.043 184 15 5 998 1178 342072937 342073116 1.410000e-50 211
32 TraesCS1A01G249900 chr1D 87.845 181 15 6 998 1175 342126290 342126466 6.560000e-49 206
33 TraesCS1A01G249900 chr1D 86.842 190 16 5 1782 1971 342167750 342167930 2.360000e-48 204
34 TraesCS1A01G249900 chr1D 83.568 213 30 5 1538 1747 342076613 342076823 1.420000e-45 195
35 TraesCS1A01G249900 chr1D 82.648 219 37 1 1541 1758 342129041 342129259 5.110000e-45 193
36 TraesCS1A01G249900 chr1D 84.568 162 22 2 998 1159 342068822 342068980 1.860000e-34 158
37 TraesCS1A01G249900 chr1D 85.714 112 16 0 4059 4170 468265379 468265268 8.790000e-23 119
38 TraesCS1A01G249900 chr4A 90.848 743 57 5 2907 3638 682992472 682993214 0.000000e+00 985
39 TraesCS1A01G249900 chr5A 96.026 604 24 0 4206 4809 577788152 577787549 0.000000e+00 983
40 TraesCS1A01G249900 chr5A 94.792 192 10 0 4806 4997 577785050 577784859 2.920000e-77 300
41 TraesCS1A01G249900 chr5A 91.667 192 16 0 4806 4997 335263472 335263281 2.970000e-67 267
42 TraesCS1A01G249900 chr5A 91.503 153 11 2 555 706 493618505 493618656 5.070000e-50 209
43 TraesCS1A01G249900 chr5A 87.755 98 12 0 4073 4170 246820165 246820068 1.140000e-21 115
44 TraesCS1A01G249900 chr6A 90.431 742 59 5 2907 3638 553765337 553764598 0.000000e+00 966
45 TraesCS1A01G249900 chr6A 95.652 483 21 0 1 483 85581081 85581563 0.000000e+00 776
46 TraesCS1A01G249900 chr7D 92.733 633 42 2 3010 3638 599196461 599195829 0.000000e+00 911
47 TraesCS1A01G249900 chr1B 85.683 901 80 21 1956 2811 458165499 458166395 0.000000e+00 904
48 TraesCS1A01G249900 chr1B 94.649 542 24 3 3639 4177 458080004 458080543 0.000000e+00 835
49 TraesCS1A01G249900 chr1B 90.702 570 51 2 2178 2746 458059390 458059958 0.000000e+00 758
50 TraesCS1A01G249900 chr1B 94.387 481 26 1 1 480 279906209 279905729 0.000000e+00 737
51 TraesCS1A01G249900 chr1B 84.514 762 69 14 1781 2523 458124030 458124761 0.000000e+00 708
52 TraesCS1A01G249900 chr1B 89.474 551 49 5 3655 4205 458125780 458126321 0.000000e+00 688
53 TraesCS1A01G249900 chr1B 88.748 551 54 4 3655 4205 458260392 458260934 0.000000e+00 667
54 TraesCS1A01G249900 chr1B 89.665 358 20 11 1438 1784 458012089 458012440 1.650000e-119 440
55 TraesCS1A01G249900 chr1B 88.643 361 18 10 1438 1784 458164884 458165235 7.740000e-113 418
56 TraesCS1A01G249900 chr1B 81.129 567 56 21 741 1271 458011436 458011987 1.670000e-109 407
57 TraesCS1A01G249900 chr1B 87.744 359 28 9 1435 1784 458123611 458123962 6.020000e-109 405
58 TraesCS1A01G249900 chr1B 87.887 355 30 5 1435 1784 458204944 458205290 6.020000e-109 405
59 TraesCS1A01G249900 chr1B 79.239 578 57 24 741 1271 458122267 458122828 1.330000e-90 344
60 TraesCS1A01G249900 chr1B 91.892 185 11 4 523 704 597686510 597686327 6.420000e-64 255
61 TraesCS1A01G249900 chr1B 81.533 287 32 15 998 1271 458005990 458006268 3.030000e-52 217
62 TraesCS1A01G249900 chr1B 92.667 150 11 0 3639 3788 458166568 458166717 3.030000e-52 217
63 TraesCS1A01G249900 chr1B 77.103 428 50 16 741 1145 458163962 458164364 2.360000e-48 204
64 TraesCS1A01G249900 chr1B 96.694 121 4 0 2748 2868 458079890 458080010 8.480000e-48 202
65 TraesCS1A01G249900 chr1B 81.124 249 21 14 1958 2180 458014099 458014347 5.140000e-40 176
66 TraesCS1A01G249900 chr1B 82.723 191 24 5 1781 1971 458165304 458165485 1.440000e-35 161
67 TraesCS1A01G249900 chr1B 85.088 114 15 2 4058 4170 646931222 646931110 1.140000e-21 115
68 TraesCS1A01G249900 chr1B 96.667 60 2 0 2846 2905 458079953 458080012 3.180000e-17 100
69 TraesCS1A01G249900 chr7B 91.598 607 46 4 4206 4809 746799285 746799889 0.000000e+00 833
70 TraesCS1A01G249900 chr7B 96.480 483 16 1 1 483 51061760 51061279 0.000000e+00 797
71 TraesCS1A01G249900 chr7B 89.836 610 52 8 4206 4809 529667917 529667312 0.000000e+00 774
72 TraesCS1A01G249900 chr7B 81.837 479 63 14 2955 3421 608864139 608864605 1.020000e-101 381
73 TraesCS1A01G249900 chr7B 93.229 192 13 0 4806 4997 638494528 638494337 2.940000e-72 283
74 TraesCS1A01G249900 chr7B 92.708 192 14 0 4806 4997 529664822 529664631 1.370000e-70 278
75 TraesCS1A01G249900 chr7B 86.719 128 15 2 3512 3638 608875081 608875207 1.880000e-29 141
76 TraesCS1A01G249900 chr2D 90.894 604 50 1 4206 4809 15968597 15969195 0.000000e+00 806
77 TraesCS1A01G249900 chr2D 91.908 173 10 4 523 692 582496437 582496266 6.470000e-59 239
78 TraesCS1A01G249900 chr2D 86.243 189 15 8 523 709 29520221 29520042 1.420000e-45 195
79 TraesCS1A01G249900 chr2D 87.611 113 4 4 523 634 51074531 51074634 6.790000e-24 122
80 TraesCS1A01G249900 chr5D 90.203 592 38 7 2906 3492 370957070 370956494 0.000000e+00 754
81 TraesCS1A01G249900 chrUn 94.606 482 22 3 1 480 31720525 31720046 0.000000e+00 743
82 TraesCS1A01G249900 chrUn 95.028 181 6 2 523 700 194087048 194087228 1.060000e-71 281
83 TraesCS1A01G249900 chrUn 90.625 192 18 0 4806 4997 87830575 87830384 6.420000e-64 255
84 TraesCS1A01G249900 chr3B 94.154 479 27 1 1 478 426086654 426087132 0.000000e+00 728
85 TraesCS1A01G249900 chr3B 94.154 479 27 1 1 478 428200808 428201286 0.000000e+00 728
86 TraesCS1A01G249900 chr3B 83.607 122 19 1 4058 4178 245946728 245946607 4.090000e-21 113
87 TraesCS1A01G249900 chr5B 93.789 483 29 1 1 482 700598018 700597536 0.000000e+00 725
88 TraesCS1A01G249900 chr5B 85.965 114 15 1 4058 4171 176588343 176588231 2.440000e-23 121
89 TraesCS1A01G249900 chr5B 83.333 132 17 5 3508 3638 545522747 545522874 3.160000e-22 117
90 TraesCS1A01G249900 chr7A 97.253 182 4 1 523 703 677931935 677931754 1.750000e-79 307
91 TraesCS1A01G249900 chr3D 91.071 56 3 2 3584 3638 184141065 184141011 1.930000e-09 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G249900 chr1A 441834270 441839266 4996 False 3148.00 9228 100.000000 1 4997 3 chr1A.!!$F5 4996
1 TraesCS1A01G249900 chr3A 437989883 437990607 724 True 1173.00 1173 95.771000 2907 3638 1 chr3A.!!$R1 731
2 TraesCS1A01G249900 chr3A 742371118 742374404 3286 True 680.00 1033 97.456500 4206 4997 2 chr3A.!!$R5 791
3 TraesCS1A01G249900 chr3A 584000310 584003553 3243 True 569.50 845 94.247500 4256 4997 2 chr3A.!!$R4 741
4 TraesCS1A01G249900 chr2A 770268896 770269498 602 False 1070.00 1070 98.675000 4206 4809 1 chr2A.!!$F1 603
5 TraesCS1A01G249900 chr2A 526733203 526736558 3355 True 693.00 1053 97.968500 4204 4997 2 chr2A.!!$R3 793
6 TraesCS1A01G249900 chr2A 770281073 770284374 3301 False 684.50 1053 96.817000 4206 4997 2 chr2A.!!$F2 791
7 TraesCS1A01G249900 chr2A 640273266 640273976 710 True 623.00 623 83.196000 2946 3641 1 chr2A.!!$R2 695
8 TraesCS1A01G249900 chr1D 474732097 474732842 745 True 734.00 734 85.020000 2907 3638 1 chr1D.!!$R2 731
9 TraesCS1A01G249900 chr1D 342165546 342169406 3860 False 550.80 1002 88.797400 741 4205 5 chr1D.!!$F3 3464
10 TraesCS1A01G249900 chr4A 682992472 682993214 742 False 985.00 985 90.848000 2907 3638 1 chr4A.!!$F1 731
11 TraesCS1A01G249900 chr5A 577784859 577788152 3293 True 641.50 983 95.409000 4206 4997 2 chr5A.!!$R3 791
12 TraesCS1A01G249900 chr6A 553764598 553765337 739 True 966.00 966 90.431000 2907 3638 1 chr6A.!!$R1 731
13 TraesCS1A01G249900 chr7D 599195829 599196461 632 True 911.00 911 92.733000 3010 3638 1 chr7D.!!$R1 628
14 TraesCS1A01G249900 chr1B 458059390 458059958 568 False 758.00 758 90.702000 2178 2746 1 chr1B.!!$F2 568
15 TraesCS1A01G249900 chr1B 458260392 458260934 542 False 667.00 667 88.748000 3655 4205 1 chr1B.!!$F4 550
16 TraesCS1A01G249900 chr1B 458122267 458126321 4054 False 536.25 708 85.242750 741 4205 4 chr1B.!!$F7 3464
17 TraesCS1A01G249900 chr1B 458163962 458166717 2755 False 380.80 904 85.363800 741 3788 5 chr1B.!!$F8 3047
18 TraesCS1A01G249900 chr1B 458079890 458080543 653 False 379.00 835 96.003333 2748 4177 3 chr1B.!!$F6 1429
19 TraesCS1A01G249900 chr1B 458011436 458014347 2911 False 341.00 440 83.972667 741 2180 3 chr1B.!!$F5 1439
20 TraesCS1A01G249900 chr7B 746799285 746799889 604 False 833.00 833 91.598000 4206 4809 1 chr7B.!!$F3 603
21 TraesCS1A01G249900 chr7B 529664631 529667917 3286 True 526.00 774 91.272000 4206 4997 2 chr7B.!!$R3 791
22 TraesCS1A01G249900 chr2D 15968597 15969195 598 False 806.00 806 90.894000 4206 4809 1 chr2D.!!$F1 603
23 TraesCS1A01G249900 chr5D 370956494 370957070 576 True 754.00 754 90.203000 2906 3492 1 chr5D.!!$R1 586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 509 0.034089 GACCCTGTTTATGCCAGGCT 60.034 55.000 14.15 0.35 46.73 4.58 F
1201 1541 0.034670 ATTGCTCCTCTGCTTGGGTC 60.035 55.000 0.00 0.00 0.00 4.46 F
1235 1575 0.250901 AACAGCATTTCGCCTCCTGT 60.251 50.000 0.00 0.00 44.04 4.00 F
1237 1577 0.392193 CAGCATTTCGCCTCCTGTCT 60.392 55.000 0.00 0.00 44.04 3.41 F
1291 1631 0.528017 TGTTTTTGCACTGCCACGAA 59.472 45.000 0.00 0.00 0.00 3.85 F
1426 2458 0.602638 TTAGTGCTGCTGTTCCACCG 60.603 55.000 0.00 0.00 0.00 4.94 F
1505 2545 1.064758 AGCAACCAACAAGTCTCACCA 60.065 47.619 0.00 0.00 0.00 4.17 F
1602 2652 1.298938 GTCGCTTCGTCCGGATACC 60.299 63.158 7.81 0.00 0.00 2.73 F
1923 5583 2.548480 CTCCTGTTCGGTTTCTCCAAAC 59.452 50.000 0.00 0.00 41.22 2.93 F
3860 8397 2.071778 TATTTGGGCCTGCAGATTCC 57.928 50.000 17.39 13.66 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1331 1671 0.593128 GGGTATGTGATGAATGCCGC 59.407 55.000 0.00 0.00 31.07 6.53 R
2153 5875 2.633481 ACGCTCCTTGTTCCTTTAGAGT 59.367 45.455 0.00 0.00 0.00 3.24 R
2305 6027 3.361414 CTTCGCTAACTCGGTAACTAGC 58.639 50.000 0.00 0.00 34.29 3.42 R
2452 6174 3.672397 CGTCTCTGACATATAGCACATGC 59.328 47.826 0.00 0.00 35.32 4.06 R
2858 7279 5.438761 AACAAGTTCATTTGGTCACTAGC 57.561 39.130 0.00 0.00 32.32 3.42 R
2861 7282 6.379988 ACCTAAAACAAGTTCATTTGGTCACT 59.620 34.615 0.00 0.00 32.32 3.41 R
3489 8021 2.661176 TCCCTCCCATTCTACCACTT 57.339 50.000 0.00 0.00 0.00 3.16 R
3641 8178 6.073003 GGTCAGCAGCATAATAACATTAGGTC 60.073 42.308 0.00 0.00 0.00 3.85 R
3956 8496 1.742880 CAGCTGGTCATGTCCACCG 60.743 63.158 7.66 0.89 36.61 4.94 R
4884 12009 4.810790 AGACGATTTGAAGAAGACGACAT 58.189 39.130 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.977244 CAAACACCCTGCCGCCAC 61.977 66.667 0.00 0.00 0.00 5.01
32 33 4.760047 CCGCCACCTCCGAACCAG 62.760 72.222 0.00 0.00 0.00 4.00
35 36 3.636231 CCACCTCCGAACCAGCCA 61.636 66.667 0.00 0.00 0.00 4.75
36 37 2.358737 CACCTCCGAACCAGCCAC 60.359 66.667 0.00 0.00 0.00 5.01
37 38 2.847234 ACCTCCGAACCAGCCACA 60.847 61.111 0.00 0.00 0.00 4.17
38 39 2.224159 ACCTCCGAACCAGCCACAT 61.224 57.895 0.00 0.00 0.00 3.21
39 40 1.450312 CCTCCGAACCAGCCACATC 60.450 63.158 0.00 0.00 0.00 3.06
40 41 1.296392 CTCCGAACCAGCCACATCA 59.704 57.895 0.00 0.00 0.00 3.07
41 42 0.107508 CTCCGAACCAGCCACATCAT 60.108 55.000 0.00 0.00 0.00 2.45
42 43 0.107703 TCCGAACCAGCCACATCATC 60.108 55.000 0.00 0.00 0.00 2.92
43 44 0.392863 CCGAACCAGCCACATCATCA 60.393 55.000 0.00 0.00 0.00 3.07
44 45 1.012086 CGAACCAGCCACATCATCAG 58.988 55.000 0.00 0.00 0.00 2.90
45 46 0.737219 GAACCAGCCACATCATCAGC 59.263 55.000 0.00 0.00 0.00 4.26
46 47 0.038599 AACCAGCCACATCATCAGCA 59.961 50.000 0.00 0.00 0.00 4.41
47 48 0.393944 ACCAGCCACATCATCAGCAG 60.394 55.000 0.00 0.00 0.00 4.24
48 49 1.101635 CCAGCCACATCATCAGCAGG 61.102 60.000 0.00 0.00 0.00 4.85
49 50 1.453379 AGCCACATCATCAGCAGGC 60.453 57.895 0.00 0.00 42.31 4.85
50 51 2.831366 GCCACATCATCAGCAGGCG 61.831 63.158 0.00 0.00 31.88 5.52
51 52 2.713770 CACATCATCAGCAGGCGC 59.286 61.111 0.00 0.00 38.99 6.53
52 53 2.893895 ACATCATCAGCAGGCGCG 60.894 61.111 0.00 0.00 45.49 6.86
53 54 2.893895 CATCATCAGCAGGCGCGT 60.894 61.111 8.43 0.00 45.49 6.01
54 55 2.893895 ATCATCAGCAGGCGCGTG 60.894 61.111 24.99 24.99 45.49 5.34
55 56 3.670637 ATCATCAGCAGGCGCGTGT 62.671 57.895 28.63 14.41 45.49 4.49
56 57 2.296814 ATCATCAGCAGGCGCGTGTA 62.297 55.000 28.63 16.29 45.49 2.90
57 58 2.509336 ATCAGCAGGCGCGTGTAC 60.509 61.111 28.63 14.79 45.49 2.90
58 59 4.735132 TCAGCAGGCGCGTGTACC 62.735 66.667 28.63 14.10 45.49 3.34
66 67 3.524606 CGCGTGTACCCCGGAGAT 61.525 66.667 0.73 0.00 0.00 2.75
67 68 2.416260 GCGTGTACCCCGGAGATC 59.584 66.667 0.73 0.00 0.00 2.75
68 69 3.126528 CGTGTACCCCGGAGATCC 58.873 66.667 0.73 0.00 0.00 3.36
69 70 1.755395 CGTGTACCCCGGAGATCCA 60.755 63.158 0.73 0.00 35.14 3.41
70 71 1.735376 CGTGTACCCCGGAGATCCAG 61.735 65.000 0.73 0.00 35.14 3.86
71 72 1.075525 TGTACCCCGGAGATCCAGG 60.076 63.158 0.73 0.00 35.71 4.45
72 73 2.122989 TACCCCGGAGATCCAGGC 60.123 66.667 0.73 0.00 32.03 4.85
73 74 3.768833 TACCCCGGAGATCCAGGCC 62.769 68.421 0.73 0.00 32.03 5.19
81 82 4.918201 GATCCAGGCCGGCCGAAG 62.918 72.222 38.88 30.27 41.95 3.79
95 96 3.049227 CGAAGGTCATGCATCACGA 57.951 52.632 0.00 0.00 0.00 4.35
96 97 0.926155 CGAAGGTCATGCATCACGAG 59.074 55.000 0.00 0.00 0.00 4.18
97 98 0.654683 GAAGGTCATGCATCACGAGC 59.345 55.000 0.00 0.85 0.00 5.03
98 99 1.086067 AAGGTCATGCATCACGAGCG 61.086 55.000 0.00 0.00 32.52 5.03
99 100 2.528743 GGTCATGCATCACGAGCGG 61.529 63.158 0.00 0.00 33.85 5.52
100 101 1.519234 GTCATGCATCACGAGCGGA 60.519 57.895 0.00 0.00 33.85 5.54
101 102 1.519234 TCATGCATCACGAGCGGAC 60.519 57.895 0.00 0.00 33.85 4.79
102 103 2.202932 ATGCATCACGAGCGGACC 60.203 61.111 0.00 0.00 33.85 4.46
103 104 3.017771 ATGCATCACGAGCGGACCA 62.018 57.895 0.00 0.00 33.85 4.02
104 105 2.887568 GCATCACGAGCGGACCAG 60.888 66.667 0.00 0.00 0.00 4.00
105 106 2.202797 CATCACGAGCGGACCAGG 60.203 66.667 0.00 0.00 0.00 4.45
106 107 2.362503 ATCACGAGCGGACCAGGA 60.363 61.111 0.00 0.00 0.00 3.86
107 108 1.758514 ATCACGAGCGGACCAGGAT 60.759 57.895 0.00 0.00 0.00 3.24
108 109 1.739338 ATCACGAGCGGACCAGGATC 61.739 60.000 0.00 0.00 0.00 3.36
113 114 4.593864 GCGGACCAGGATCGCCTC 62.594 72.222 16.61 0.00 44.80 4.70
114 115 3.917760 CGGACCAGGATCGCCTCC 61.918 72.222 0.00 0.00 44.80 4.30
124 125 2.124860 TCGCCTCCGATCTGACGA 60.125 61.111 0.00 0.00 38.82 4.20
125 126 2.180862 TCGCCTCCGATCTGACGAG 61.181 63.158 0.00 0.00 38.82 4.18
126 127 2.725008 GCCTCCGATCTGACGAGG 59.275 66.667 11.20 11.20 35.43 4.63
127 128 2.851071 GCCTCCGATCTGACGAGGG 61.851 68.421 15.32 10.58 34.11 4.30
128 129 2.196925 CCTCCGATCTGACGAGGGG 61.197 68.421 8.66 0.00 35.09 4.79
129 130 1.152943 CTCCGATCTGACGAGGGGA 60.153 63.158 0.00 0.00 35.09 4.81
130 131 1.152943 TCCGATCTGACGAGGGGAG 60.153 63.158 0.00 0.00 35.09 4.30
131 132 2.725008 CGATCTGACGAGGGGAGC 59.275 66.667 0.00 0.00 35.09 4.70
132 133 2.851071 CGATCTGACGAGGGGAGCC 61.851 68.421 0.00 0.00 35.09 4.70
133 134 2.444895 ATCTGACGAGGGGAGCCC 60.445 66.667 0.00 0.00 45.90 5.19
155 156 4.864334 CCTCCCTGCGCCATGACC 62.864 72.222 4.18 0.00 0.00 4.02
156 157 3.790437 CTCCCTGCGCCATGACCT 61.790 66.667 4.18 0.00 0.00 3.85
157 158 4.100084 TCCCTGCGCCATGACCTG 62.100 66.667 4.18 0.00 0.00 4.00
208 209 2.588439 GGGAAACCGGCCTACCTC 59.412 66.667 0.00 0.00 43.64 3.85
209 210 2.295602 GGGAAACCGGCCTACCTCA 61.296 63.158 0.00 0.00 43.64 3.86
210 211 1.078637 GGAAACCGGCCTACCTCAC 60.079 63.158 0.00 0.00 0.00 3.51
211 212 1.078637 GAAACCGGCCTACCTCACC 60.079 63.158 0.00 0.00 0.00 4.02
212 213 2.847435 GAAACCGGCCTACCTCACCG 62.847 65.000 0.00 0.00 46.50 4.94
216 217 2.753043 GGCCTACCTCACCGACGA 60.753 66.667 0.00 0.00 0.00 4.20
217 218 2.772691 GGCCTACCTCACCGACGAG 61.773 68.421 0.00 0.00 0.00 4.18
218 219 2.799371 CCTACCTCACCGACGAGC 59.201 66.667 0.00 0.00 0.00 5.03
219 220 2.044555 CCTACCTCACCGACGAGCA 61.045 63.158 0.00 0.00 0.00 4.26
220 221 1.136984 CTACCTCACCGACGAGCAC 59.863 63.158 0.00 0.00 0.00 4.40
221 222 1.303074 TACCTCACCGACGAGCACT 60.303 57.895 0.00 0.00 0.00 4.40
222 223 1.303799 TACCTCACCGACGAGCACTC 61.304 60.000 0.00 0.00 0.00 3.51
223 224 2.179517 CTCACCGACGAGCACTCC 59.820 66.667 0.00 0.00 0.00 3.85
224 225 3.343788 CTCACCGACGAGCACTCCC 62.344 68.421 0.00 0.00 0.00 4.30
225 226 4.436998 CACCGACGAGCACTCCCC 62.437 72.222 0.00 0.00 0.00 4.81
246 247 3.491652 GCCGAAGAAGCGCTGTCC 61.492 66.667 12.58 3.21 0.00 4.02
247 248 3.181967 CCGAAGAAGCGCTGTCCG 61.182 66.667 12.58 12.66 40.75 4.79
278 279 4.593864 GGCGCCTCAGATCCGGAC 62.594 72.222 22.15 0.11 0.00 4.79
279 280 4.593864 GCGCCTCAGATCCGGACC 62.594 72.222 6.12 0.00 0.00 4.46
280 281 3.917760 CGCCTCAGATCCGGACCC 61.918 72.222 6.12 0.90 0.00 4.46
281 282 2.444895 GCCTCAGATCCGGACCCT 60.445 66.667 6.12 3.90 0.00 4.34
282 283 2.503382 GCCTCAGATCCGGACCCTC 61.503 68.421 6.12 0.00 0.00 4.30
283 284 1.075970 CCTCAGATCCGGACCCTCA 60.076 63.158 6.12 0.00 0.00 3.86
284 285 1.395826 CCTCAGATCCGGACCCTCAC 61.396 65.000 6.12 0.00 0.00 3.51
285 286 1.381327 TCAGATCCGGACCCTCACC 60.381 63.158 6.12 0.00 0.00 4.02
286 287 1.685765 CAGATCCGGACCCTCACCA 60.686 63.158 6.12 0.00 0.00 4.17
287 288 1.686110 AGATCCGGACCCTCACCAC 60.686 63.158 6.12 0.00 0.00 4.16
288 289 2.687566 ATCCGGACCCTCACCACC 60.688 66.667 6.12 0.00 0.00 4.61
291 292 3.307906 CGGACCCTCACCACCGAA 61.308 66.667 0.00 0.00 46.94 4.30
292 293 2.874664 CGGACCCTCACCACCGAAA 61.875 63.158 0.00 0.00 46.94 3.46
293 294 1.003718 GGACCCTCACCACCGAAAG 60.004 63.158 0.00 0.00 0.00 2.62
307 308 2.604046 CGAAAGGGATCGGTCAGATT 57.396 50.000 0.00 0.00 40.26 2.40
308 309 2.205074 CGAAAGGGATCGGTCAGATTG 58.795 52.381 0.00 0.00 40.26 2.67
309 310 2.565841 GAAAGGGATCGGTCAGATTGG 58.434 52.381 0.00 0.00 40.26 3.16
310 311 0.839946 AAGGGATCGGTCAGATTGGG 59.160 55.000 0.00 0.00 40.26 4.12
311 312 1.056700 AGGGATCGGTCAGATTGGGG 61.057 60.000 0.00 0.00 40.26 4.96
312 313 1.451936 GGATCGGTCAGATTGGGGG 59.548 63.158 0.00 0.00 40.26 5.40
313 314 1.054406 GGATCGGTCAGATTGGGGGA 61.054 60.000 0.00 0.00 40.26 4.81
314 315 0.837272 GATCGGTCAGATTGGGGGAA 59.163 55.000 0.00 0.00 40.26 3.97
315 316 0.839946 ATCGGTCAGATTGGGGGAAG 59.160 55.000 0.00 0.00 35.73 3.46
316 317 0.546747 TCGGTCAGATTGGGGGAAGT 60.547 55.000 0.00 0.00 0.00 3.01
317 318 0.392998 CGGTCAGATTGGGGGAAGTG 60.393 60.000 0.00 0.00 0.00 3.16
318 319 0.681243 GGTCAGATTGGGGGAAGTGC 60.681 60.000 0.00 0.00 0.00 4.40
319 320 0.329596 GTCAGATTGGGGGAAGTGCT 59.670 55.000 0.00 0.00 0.00 4.40
320 321 0.329261 TCAGATTGGGGGAAGTGCTG 59.671 55.000 0.00 0.00 0.00 4.41
321 322 0.682209 CAGATTGGGGGAAGTGCTGG 60.682 60.000 0.00 0.00 0.00 4.85
322 323 0.846427 AGATTGGGGGAAGTGCTGGA 60.846 55.000 0.00 0.00 0.00 3.86
323 324 0.259938 GATTGGGGGAAGTGCTGGAT 59.740 55.000 0.00 0.00 0.00 3.41
324 325 0.259938 ATTGGGGGAAGTGCTGGATC 59.740 55.000 0.00 0.00 0.00 3.36
325 326 1.863155 TTGGGGGAAGTGCTGGATCC 61.863 60.000 4.20 4.20 0.00 3.36
327 328 2.190578 GGGAAGTGCTGGATCCCG 59.809 66.667 9.90 3.53 43.20 5.14
328 329 2.514824 GGAAGTGCTGGATCCCGC 60.515 66.667 20.39 20.39 0.00 6.13
329 330 2.514824 GAAGTGCTGGATCCCGCC 60.515 66.667 23.62 15.24 0.00 6.13
330 331 3.329542 GAAGTGCTGGATCCCGCCA 62.330 63.158 23.62 10.36 36.30 5.69
331 332 2.819984 GAAGTGCTGGATCCCGCCAA 62.820 60.000 23.62 4.92 37.52 4.52
332 333 2.825836 GTGCTGGATCCCGCCAAG 60.826 66.667 23.62 8.59 37.52 3.61
333 334 3.329889 TGCTGGATCCCGCCAAGT 61.330 61.111 23.62 0.00 37.52 3.16
334 335 2.514824 GCTGGATCCCGCCAAGTC 60.515 66.667 16.84 0.00 37.52 3.01
335 336 2.202932 CTGGATCCCGCCAAGTCG 60.203 66.667 9.90 0.00 37.52 4.18
336 337 4.467084 TGGATCCCGCCAAGTCGC 62.467 66.667 9.90 0.00 34.31 5.19
413 414 4.400251 CGAGGTGGGGAGGGAGGT 62.400 72.222 0.00 0.00 0.00 3.85
414 415 2.689034 GAGGTGGGGAGGGAGGTG 60.689 72.222 0.00 0.00 0.00 4.00
415 416 4.354943 AGGTGGGGAGGGAGGTGG 62.355 72.222 0.00 0.00 0.00 4.61
417 418 4.348495 GTGGGGAGGGAGGTGGGA 62.348 72.222 0.00 0.00 0.00 4.37
418 419 3.547737 TGGGGAGGGAGGTGGGAA 61.548 66.667 0.00 0.00 0.00 3.97
419 420 2.692741 GGGGAGGGAGGTGGGAAG 60.693 72.222 0.00 0.00 0.00 3.46
420 421 2.692741 GGGAGGGAGGTGGGAAGG 60.693 72.222 0.00 0.00 0.00 3.46
421 422 2.125225 GGAGGGAGGTGGGAAGGT 59.875 66.667 0.00 0.00 0.00 3.50
422 423 1.541620 GGAGGGAGGTGGGAAGGTT 60.542 63.158 0.00 0.00 0.00 3.50
423 424 1.685820 GAGGGAGGTGGGAAGGTTG 59.314 63.158 0.00 0.00 0.00 3.77
424 425 1.072930 AGGGAGGTGGGAAGGTTGT 60.073 57.895 0.00 0.00 0.00 3.32
425 426 0.195096 AGGGAGGTGGGAAGGTTGTA 59.805 55.000 0.00 0.00 0.00 2.41
426 427 0.618981 GGGAGGTGGGAAGGTTGTAG 59.381 60.000 0.00 0.00 0.00 2.74
427 428 0.618981 GGAGGTGGGAAGGTTGTAGG 59.381 60.000 0.00 0.00 0.00 3.18
428 429 0.035343 GAGGTGGGAAGGTTGTAGGC 60.035 60.000 0.00 0.00 0.00 3.93
429 430 1.001269 GGTGGGAAGGTTGTAGGCC 60.001 63.158 0.00 0.00 0.00 5.19
430 431 1.376812 GTGGGAAGGTTGTAGGCCG 60.377 63.158 0.00 0.00 0.00 6.13
431 432 2.437895 GGGAAGGTTGTAGGCCGC 60.438 66.667 0.00 0.00 0.00 6.53
432 433 2.437895 GGAAGGTTGTAGGCCGCC 60.438 66.667 0.00 0.00 0.00 6.13
433 434 2.818274 GAAGGTTGTAGGCCGCCG 60.818 66.667 3.05 0.00 0.00 6.46
434 435 4.404098 AAGGTTGTAGGCCGCCGG 62.404 66.667 0.00 0.00 0.00 6.13
436 437 4.171103 GGTTGTAGGCCGCCGGAT 62.171 66.667 7.68 0.00 0.00 4.18
437 438 2.588034 GTTGTAGGCCGCCGGATC 60.588 66.667 7.68 0.00 0.00 3.36
438 439 2.762459 TTGTAGGCCGCCGGATCT 60.762 61.111 7.68 5.93 0.00 2.75
439 440 3.088941 TTGTAGGCCGCCGGATCTG 62.089 63.158 7.68 0.00 0.00 2.90
440 441 4.301027 GTAGGCCGCCGGATCTGG 62.301 72.222 16.98 16.98 0.00 3.86
445 446 4.547367 CCGCCGGATCTGGGTTCC 62.547 72.222 22.38 4.30 0.00 3.62
446 447 4.547367 CGCCGGATCTGGGTTCCC 62.547 72.222 22.38 3.92 0.00 3.97
447 448 4.191015 GCCGGATCTGGGTTCCCC 62.191 72.222 22.38 0.06 45.71 4.81
487 488 3.873812 GCGGGGGACGGGAATGAT 61.874 66.667 0.00 0.00 44.51 2.45
488 489 2.111043 CGGGGGACGGGAATGATG 59.889 66.667 0.00 0.00 39.42 3.07
489 490 2.515901 GGGGGACGGGAATGATGG 59.484 66.667 0.00 0.00 0.00 3.51
490 491 2.076184 GGGGGACGGGAATGATGGA 61.076 63.158 0.00 0.00 0.00 3.41
491 492 1.148498 GGGGACGGGAATGATGGAC 59.852 63.158 0.00 0.00 0.00 4.02
492 493 1.148498 GGGACGGGAATGATGGACC 59.852 63.158 0.00 0.00 0.00 4.46
493 494 1.148498 GGACGGGAATGATGGACCC 59.852 63.158 0.00 0.00 40.17 4.46
494 495 1.345715 GGACGGGAATGATGGACCCT 61.346 60.000 0.00 0.00 41.28 4.34
495 496 0.179045 GACGGGAATGATGGACCCTG 60.179 60.000 0.00 0.00 41.28 4.45
496 497 0.914417 ACGGGAATGATGGACCCTGT 60.914 55.000 0.00 0.00 41.28 4.00
497 498 0.255890 CGGGAATGATGGACCCTGTT 59.744 55.000 0.00 0.00 41.28 3.16
498 499 1.340991 CGGGAATGATGGACCCTGTTT 60.341 52.381 0.00 0.00 41.28 2.83
499 500 2.092646 CGGGAATGATGGACCCTGTTTA 60.093 50.000 0.00 0.00 41.28 2.01
500 501 3.435026 CGGGAATGATGGACCCTGTTTAT 60.435 47.826 0.00 0.00 41.28 1.40
501 502 3.891366 GGGAATGATGGACCCTGTTTATG 59.109 47.826 0.00 0.00 40.39 1.90
502 503 3.319122 GGAATGATGGACCCTGTTTATGC 59.681 47.826 0.00 0.00 0.00 3.14
503 504 2.435372 TGATGGACCCTGTTTATGCC 57.565 50.000 0.00 0.00 0.00 4.40
504 505 1.638070 TGATGGACCCTGTTTATGCCA 59.362 47.619 0.00 0.00 0.00 4.92
505 506 2.301346 GATGGACCCTGTTTATGCCAG 58.699 52.381 0.00 0.00 0.00 4.85
507 508 1.037579 GGACCCTGTTTATGCCAGGC 61.038 60.000 3.66 3.66 46.73 4.85
508 509 0.034089 GACCCTGTTTATGCCAGGCT 60.034 55.000 14.15 0.35 46.73 4.58
509 510 0.323725 ACCCTGTTTATGCCAGGCTG 60.324 55.000 14.15 7.75 46.73 4.85
510 511 1.039233 CCCTGTTTATGCCAGGCTGG 61.039 60.000 29.44 29.44 46.73 4.85
511 512 0.323725 CCTGTTTATGCCAGGCTGGT 60.324 55.000 32.80 18.04 42.81 4.00
512 513 1.064758 CCTGTTTATGCCAGGCTGGTA 60.065 52.381 32.80 29.93 42.81 3.25
513 514 2.292267 CTGTTTATGCCAGGCTGGTAG 58.708 52.381 32.80 13.21 40.46 3.18
514 515 1.912731 TGTTTATGCCAGGCTGGTAGA 59.087 47.619 32.80 24.64 40.46 2.59
515 516 2.307392 TGTTTATGCCAGGCTGGTAGAA 59.693 45.455 32.80 28.75 40.46 2.10
516 517 2.945668 GTTTATGCCAGGCTGGTAGAAG 59.054 50.000 32.80 8.60 40.46 2.85
517 518 0.469917 TATGCCAGGCTGGTAGAAGC 59.530 55.000 32.80 18.47 40.46 3.86
518 519 2.512515 GCCAGGCTGGTAGAAGCG 60.513 66.667 32.80 7.08 44.52 4.68
519 520 3.019003 GCCAGGCTGGTAGAAGCGA 62.019 63.158 32.80 0.00 44.52 4.93
520 521 1.142748 CCAGGCTGGTAGAAGCGAG 59.857 63.158 25.74 0.00 44.52 5.03
521 522 1.520342 CAGGCTGGTAGAAGCGAGC 60.520 63.158 6.61 0.00 44.52 5.03
522 523 1.984570 AGGCTGGTAGAAGCGAGCA 60.985 57.895 0.00 0.00 44.52 4.26
523 524 1.144936 GGCTGGTAGAAGCGAGCAT 59.855 57.895 0.00 0.00 44.52 3.79
524 525 0.878086 GGCTGGTAGAAGCGAGCATC 60.878 60.000 0.00 0.00 44.52 3.91
525 526 0.179100 GCTGGTAGAAGCGAGCATCA 60.179 55.000 3.15 0.00 32.56 3.07
526 527 1.740380 GCTGGTAGAAGCGAGCATCAA 60.740 52.381 3.15 0.00 32.56 2.57
527 528 2.831333 CTGGTAGAAGCGAGCATCAAT 58.169 47.619 3.15 0.00 33.17 2.57
528 529 2.543012 CTGGTAGAAGCGAGCATCAATG 59.457 50.000 3.15 0.00 33.17 2.82
567 568 8.647143 TTGAATTTTCTGATTTTCTGTTGACC 57.353 30.769 0.00 0.00 0.00 4.02
568 569 7.780064 TGAATTTTCTGATTTTCTGTTGACCA 58.220 30.769 0.00 0.00 0.00 4.02
569 570 8.256605 TGAATTTTCTGATTTTCTGTTGACCAA 58.743 29.630 0.00 0.00 0.00 3.67
570 571 9.264719 GAATTTTCTGATTTTCTGTTGACCAAT 57.735 29.630 0.00 0.00 0.00 3.16
572 573 9.696917 ATTTTCTGATTTTCTGTTGACCAATAC 57.303 29.630 0.00 0.00 0.00 1.89
573 574 6.480524 TCTGATTTTCTGTTGACCAATACG 57.519 37.500 0.00 0.00 0.00 3.06
574 575 5.995282 TCTGATTTTCTGTTGACCAATACGT 59.005 36.000 0.00 0.00 0.00 3.57
575 576 6.485313 TCTGATTTTCTGTTGACCAATACGTT 59.515 34.615 0.00 0.00 0.00 3.99
576 577 6.434596 TGATTTTCTGTTGACCAATACGTTG 58.565 36.000 0.00 0.00 35.05 4.10
577 578 6.261158 TGATTTTCTGTTGACCAATACGTTGA 59.739 34.615 0.00 0.00 37.53 3.18
578 579 5.666969 TTTCTGTTGACCAATACGTTGAG 57.333 39.130 0.00 0.00 37.53 3.02
579 580 3.064207 TCTGTTGACCAATACGTTGAGC 58.936 45.455 0.00 0.00 37.53 4.26
580 581 2.805671 CTGTTGACCAATACGTTGAGCA 59.194 45.455 0.00 0.00 37.53 4.26
581 582 2.546368 TGTTGACCAATACGTTGAGCAC 59.454 45.455 0.00 0.00 37.53 4.40
582 583 2.535012 TGACCAATACGTTGAGCACA 57.465 45.000 0.00 0.00 37.53 4.57
583 584 2.839975 TGACCAATACGTTGAGCACAA 58.160 42.857 0.00 0.00 37.53 3.33
584 585 3.407698 TGACCAATACGTTGAGCACAAT 58.592 40.909 0.00 0.00 37.53 2.71
585 586 3.818210 TGACCAATACGTTGAGCACAATT 59.182 39.130 0.00 0.00 37.53 2.32
586 587 4.158384 GACCAATACGTTGAGCACAATTG 58.842 43.478 3.24 3.24 37.53 2.32
587 588 3.568007 ACCAATACGTTGAGCACAATTGT 59.432 39.130 4.92 4.92 37.53 2.71
588 589 4.158384 CCAATACGTTGAGCACAATTGTC 58.842 43.478 8.48 4.08 37.53 3.18
589 590 3.722555 ATACGTTGAGCACAATTGTCG 57.277 42.857 8.48 10.67 38.32 4.35
590 591 0.586319 ACGTTGAGCACAATTGTCGG 59.414 50.000 8.48 0.00 38.32 4.79
591 592 0.865111 CGTTGAGCACAATTGTCGGA 59.135 50.000 8.48 0.00 38.32 4.55
592 593 1.262950 CGTTGAGCACAATTGTCGGAA 59.737 47.619 8.48 0.00 38.32 4.30
593 594 2.095768 CGTTGAGCACAATTGTCGGAAT 60.096 45.455 8.48 0.00 38.32 3.01
594 595 3.236816 GTTGAGCACAATTGTCGGAATG 58.763 45.455 8.48 0.00 38.32 2.67
595 596 2.777094 TGAGCACAATTGTCGGAATGA 58.223 42.857 8.48 0.00 0.00 2.57
596 597 3.145286 TGAGCACAATTGTCGGAATGAA 58.855 40.909 8.48 0.00 0.00 2.57
597 598 3.189080 TGAGCACAATTGTCGGAATGAAG 59.811 43.478 8.48 0.00 0.00 3.02
598 599 3.411446 AGCACAATTGTCGGAATGAAGA 58.589 40.909 8.48 0.00 0.00 2.87
599 600 3.438087 AGCACAATTGTCGGAATGAAGAG 59.562 43.478 8.48 0.00 0.00 2.85
600 601 3.436704 GCACAATTGTCGGAATGAAGAGA 59.563 43.478 8.48 0.00 0.00 3.10
601 602 4.083324 GCACAATTGTCGGAATGAAGAGAA 60.083 41.667 8.48 0.00 0.00 2.87
602 603 5.625251 CACAATTGTCGGAATGAAGAGAAG 58.375 41.667 8.48 0.00 0.00 2.85
603 604 5.409520 CACAATTGTCGGAATGAAGAGAAGA 59.590 40.000 8.48 0.00 0.00 2.87
604 605 5.997746 ACAATTGTCGGAATGAAGAGAAGAA 59.002 36.000 4.92 0.00 0.00 2.52
605 606 6.486657 ACAATTGTCGGAATGAAGAGAAGAAA 59.513 34.615 4.92 0.00 0.00 2.52
606 607 7.175641 ACAATTGTCGGAATGAAGAGAAGAAAT 59.824 33.333 4.92 0.00 0.00 2.17
607 608 8.668353 CAATTGTCGGAATGAAGAGAAGAAATA 58.332 33.333 0.00 0.00 0.00 1.40
608 609 8.792830 ATTGTCGGAATGAAGAGAAGAAATAA 57.207 30.769 0.00 0.00 0.00 1.40
609 610 8.615878 TTGTCGGAATGAAGAGAAGAAATAAA 57.384 30.769 0.00 0.00 0.00 1.40
610 611 8.792830 TGTCGGAATGAAGAGAAGAAATAAAT 57.207 30.769 0.00 0.00 0.00 1.40
611 612 8.668353 TGTCGGAATGAAGAGAAGAAATAAATG 58.332 33.333 0.00 0.00 0.00 2.32
612 613 8.883731 GTCGGAATGAAGAGAAGAAATAAATGA 58.116 33.333 0.00 0.00 0.00 2.57
613 614 9.618890 TCGGAATGAAGAGAAGAAATAAATGAT 57.381 29.630 0.00 0.00 0.00 2.45
645 646 9.679661 TTGAATAAATGTGCCTTCTAACTATGA 57.320 29.630 0.00 0.00 0.00 2.15
646 647 9.851686 TGAATAAATGTGCCTTCTAACTATGAT 57.148 29.630 0.00 0.00 0.00 2.45
648 649 9.851686 AATAAATGTGCCTTCTAACTATGATGA 57.148 29.630 0.00 0.00 0.00 2.92
649 650 9.851686 ATAAATGTGCCTTCTAACTATGATGAA 57.148 29.630 0.00 0.00 0.00 2.57
650 651 7.559590 AATGTGCCTTCTAACTATGATGAAC 57.440 36.000 0.00 0.00 0.00 3.18
651 652 6.048732 TGTGCCTTCTAACTATGATGAACA 57.951 37.500 0.00 0.00 0.00 3.18
652 653 6.472016 TGTGCCTTCTAACTATGATGAACAA 58.528 36.000 0.00 0.00 0.00 2.83
653 654 6.595326 TGTGCCTTCTAACTATGATGAACAAG 59.405 38.462 0.00 0.00 0.00 3.16
654 655 6.818644 GTGCCTTCTAACTATGATGAACAAGA 59.181 38.462 0.00 0.00 0.00 3.02
655 656 7.334421 GTGCCTTCTAACTATGATGAACAAGAA 59.666 37.037 0.00 0.00 0.00 2.52
656 657 7.882791 TGCCTTCTAACTATGATGAACAAGAAA 59.117 33.333 0.00 0.00 0.00 2.52
657 658 8.730680 GCCTTCTAACTATGATGAACAAGAAAA 58.269 33.333 0.00 0.00 0.00 2.29
665 666 9.696917 ACTATGATGAACAAGAAAATTTTGGTC 57.303 29.630 8.47 3.76 41.52 4.02
666 667 9.918630 CTATGATGAACAAGAAAATTTTGGTCT 57.081 29.630 8.47 0.00 41.66 3.85
669 670 9.748708 TGATGAACAAGAAAATTTTGGTCTAAG 57.251 29.630 8.47 0.00 41.66 2.18
670 671 9.196552 GATGAACAAGAAAATTTTGGTCTAAGG 57.803 33.333 8.47 0.00 41.66 2.69
671 672 8.073467 TGAACAAGAAAATTTTGGTCTAAGGT 57.927 30.769 8.47 0.00 41.66 3.50
672 673 8.536175 TGAACAAGAAAATTTTGGTCTAAGGTT 58.464 29.630 8.47 5.64 41.66 3.50
675 676 9.416284 ACAAGAAAATTTTGGTCTAAGGTTAGA 57.584 29.630 8.47 0.00 37.44 2.10
676 677 9.899226 CAAGAAAATTTTGGTCTAAGGTTAGAG 57.101 33.333 8.47 0.00 40.23 2.43
677 678 9.642343 AAGAAAATTTTGGTCTAAGGTTAGAGT 57.358 29.630 8.47 0.00 40.23 3.24
678 679 9.067986 AGAAAATTTTGGTCTAAGGTTAGAGTG 57.932 33.333 8.47 0.00 40.23 3.51
679 680 6.819397 AATTTTGGTCTAAGGTTAGAGTGC 57.181 37.500 0.00 0.00 40.23 4.40
680 681 4.967084 TTTGGTCTAAGGTTAGAGTGCA 57.033 40.909 0.00 0.00 40.23 4.57
681 682 5.499004 TTTGGTCTAAGGTTAGAGTGCAT 57.501 39.130 0.00 0.00 40.23 3.96
682 683 5.499004 TTGGTCTAAGGTTAGAGTGCATT 57.501 39.130 0.00 0.00 40.23 3.56
683 684 4.832248 TGGTCTAAGGTTAGAGTGCATTG 58.168 43.478 0.00 0.00 40.23 2.82
684 685 3.623510 GGTCTAAGGTTAGAGTGCATTGC 59.376 47.826 0.46 0.46 40.23 3.56
685 686 4.253685 GTCTAAGGTTAGAGTGCATTGCA 58.746 43.478 7.38 7.38 40.23 4.08
707 708 7.555639 GCACGTGCAAATTTACTTGTATAAA 57.444 32.000 34.52 0.00 41.59 1.40
708 709 7.998141 GCACGTGCAAATTTACTTGTATAAAA 58.002 30.769 34.52 0.00 41.59 1.52
709 710 8.480853 GCACGTGCAAATTTACTTGTATAAAAA 58.519 29.630 34.52 0.00 41.59 1.94
720 721 9.991388 TTTACTTGTATAAAAATATGCCACGTC 57.009 29.630 0.00 0.00 0.00 4.34
721 722 7.859325 ACTTGTATAAAAATATGCCACGTCT 57.141 32.000 0.00 0.00 0.00 4.18
722 723 8.276252 ACTTGTATAAAAATATGCCACGTCTT 57.724 30.769 0.00 0.00 0.00 3.01
723 724 8.736244 ACTTGTATAAAAATATGCCACGTCTTT 58.264 29.630 0.00 0.00 0.00 2.52
724 725 8.903570 TTGTATAAAAATATGCCACGTCTTTG 57.096 30.769 0.00 0.00 0.00 2.77
725 726 8.270080 TGTATAAAAATATGCCACGTCTTTGA 57.730 30.769 0.00 0.00 0.00 2.69
726 727 8.898761 TGTATAAAAATATGCCACGTCTTTGAT 58.101 29.630 0.00 0.00 0.00 2.57
727 728 9.169468 GTATAAAAATATGCCACGTCTTTGATG 57.831 33.333 0.00 0.00 0.00 3.07
728 729 5.643379 AAAATATGCCACGTCTTTGATGT 57.357 34.783 0.00 0.00 31.28 3.06
729 730 6.751514 AAAATATGCCACGTCTTTGATGTA 57.248 33.333 0.00 0.00 29.93 2.29
730 731 5.734855 AATATGCCACGTCTTTGATGTAC 57.265 39.130 0.00 0.00 29.93 2.90
731 732 2.831685 TGCCACGTCTTTGATGTACT 57.168 45.000 0.00 0.00 29.93 2.73
732 733 2.683968 TGCCACGTCTTTGATGTACTC 58.316 47.619 0.00 0.00 29.93 2.59
733 734 2.299013 TGCCACGTCTTTGATGTACTCT 59.701 45.455 0.00 0.00 29.93 3.24
734 735 2.668457 GCCACGTCTTTGATGTACTCTG 59.332 50.000 0.00 0.00 29.93 3.35
735 736 3.254060 CCACGTCTTTGATGTACTCTGG 58.746 50.000 0.00 0.00 29.93 3.86
736 737 3.056821 CCACGTCTTTGATGTACTCTGGA 60.057 47.826 0.00 0.00 29.93 3.86
737 738 4.556233 CACGTCTTTGATGTACTCTGGAA 58.444 43.478 0.00 0.00 29.93 3.53
738 739 4.988540 CACGTCTTTGATGTACTCTGGAAA 59.011 41.667 0.00 0.00 29.93 3.13
739 740 5.465390 CACGTCTTTGATGTACTCTGGAAAA 59.535 40.000 0.00 0.00 29.93 2.29
825 843 1.425428 CCGCGACAAGAAAGCATCC 59.575 57.895 8.23 0.00 0.00 3.51
832 850 1.347707 ACAAGAAAGCATCCGACTCCA 59.652 47.619 0.00 0.00 0.00 3.86
866 894 2.852143 GCATCGCATCAAACGGAATCAG 60.852 50.000 0.00 0.00 0.00 2.90
885 916 2.425592 CGTGAGCTCACCCAACCA 59.574 61.111 35.07 2.05 43.66 3.67
888 919 2.358737 GAGCTCACCCAACCACGG 60.359 66.667 9.40 0.00 0.00 4.94
891 922 4.619227 CTCACCCAACCACGGCGT 62.619 66.667 6.77 6.77 0.00 5.68
892 923 4.920112 TCACCCAACCACGGCGTG 62.920 66.667 31.78 31.78 0.00 5.34
913 944 3.572255 TGAGCAGGTTCCAAACAAATACC 59.428 43.478 0.00 0.00 0.00 2.73
918 949 2.966516 GGTTCCAAACAAATACCCACCA 59.033 45.455 0.00 0.00 0.00 4.17
920 951 4.141688 GGTTCCAAACAAATACCCACCAAA 60.142 41.667 0.00 0.00 0.00 3.28
921 952 4.946478 TCCAAACAAATACCCACCAAAG 57.054 40.909 0.00 0.00 0.00 2.77
922 953 4.290942 TCCAAACAAATACCCACCAAAGT 58.709 39.130 0.00 0.00 0.00 2.66
923 954 4.100189 TCCAAACAAATACCCACCAAAGTG 59.900 41.667 0.00 0.00 44.12 3.16
924 955 3.744238 AACAAATACCCACCAAAGTGC 57.256 42.857 0.00 0.00 43.09 4.40
931 976 2.972505 CACCAAAGTGCTCGCGGT 60.973 61.111 6.13 0.00 37.14 5.68
933 978 3.423154 CCAAAGTGCTCGCGGTCC 61.423 66.667 6.13 0.00 0.00 4.46
951 996 3.717294 GTCTCCCACGCCCCACAT 61.717 66.667 0.00 0.00 0.00 3.21
952 997 2.933287 TCTCCCACGCCCCACATT 60.933 61.111 0.00 0.00 0.00 2.71
953 998 2.035626 CTCCCACGCCCCACATTT 59.964 61.111 0.00 0.00 0.00 2.32
954 999 2.034999 TCCCACGCCCCACATTTC 59.965 61.111 0.00 0.00 0.00 2.17
955 1000 2.035626 CCCACGCCCCACATTTCT 59.964 61.111 0.00 0.00 0.00 2.52
956 1001 2.342650 CCCACGCCCCACATTTCTG 61.343 63.158 0.00 0.00 0.00 3.02
957 1002 1.603455 CCACGCCCCACATTTCTGT 60.603 57.895 0.00 0.00 35.44 3.41
958 1003 1.586154 CCACGCCCCACATTTCTGTC 61.586 60.000 0.00 0.00 31.62 3.51
959 1004 1.671054 ACGCCCCACATTTCTGTCG 60.671 57.895 0.00 0.00 31.62 4.35
981 1026 4.742201 GCAGCCTTCGCCGTCAGA 62.742 66.667 0.00 0.00 34.57 3.27
1008 1054 1.142748 GTGAGTGAGGATGGCGAGG 59.857 63.158 0.00 0.00 0.00 4.63
1131 1177 2.743928 GAGTCCAAGGCCGCAGTG 60.744 66.667 0.00 0.00 0.00 3.66
1174 1510 2.391678 GTAATACCCCCTCGACCAGAA 58.608 52.381 0.00 0.00 0.00 3.02
1179 1515 1.609501 CCCCTCGACCAGAACTCCA 60.610 63.158 0.00 0.00 0.00 3.86
1184 1520 3.412386 CCTCGACCAGAACTCCAAAATT 58.588 45.455 0.00 0.00 0.00 1.82
1185 1521 3.189287 CCTCGACCAGAACTCCAAAATTG 59.811 47.826 0.00 0.00 0.00 2.32
1199 1539 1.553706 AAATTGCTCCTCTGCTTGGG 58.446 50.000 0.00 0.00 0.00 4.12
1201 1541 0.034670 ATTGCTCCTCTGCTTGGGTC 60.035 55.000 0.00 0.00 0.00 4.46
1203 1543 1.078567 GCTCCTCTGCTTGGGTCAG 60.079 63.158 0.00 0.00 0.00 3.51
1209 1549 1.272490 CTCTGCTTGGGTCAGTAACGA 59.728 52.381 0.00 0.00 33.48 3.85
1223 1563 6.534079 GGTCAGTAACGATTAACTAACAGCAT 59.466 38.462 0.00 0.00 0.00 3.79
1226 1566 8.653338 TCAGTAACGATTAACTAACAGCATTTC 58.347 33.333 0.00 0.00 0.00 2.17
1232 1572 1.739067 ACTAACAGCATTTCGCCTCC 58.261 50.000 0.00 0.00 44.04 4.30
1233 1573 1.279271 ACTAACAGCATTTCGCCTCCT 59.721 47.619 0.00 0.00 44.04 3.69
1234 1574 1.667724 CTAACAGCATTTCGCCTCCTG 59.332 52.381 0.00 0.00 44.04 3.86
1235 1575 0.250901 AACAGCATTTCGCCTCCTGT 60.251 50.000 0.00 0.00 44.04 4.00
1236 1576 0.674895 ACAGCATTTCGCCTCCTGTC 60.675 55.000 0.00 0.00 44.04 3.51
1237 1577 0.392193 CAGCATTTCGCCTCCTGTCT 60.392 55.000 0.00 0.00 44.04 3.41
1241 1581 2.154462 CATTTCGCCTCCTGTCTTTGT 58.846 47.619 0.00 0.00 0.00 2.83
1245 1585 0.608640 CGCCTCCTGTCTTTGTAGGT 59.391 55.000 0.00 0.00 35.54 3.08
1257 1597 1.681538 TTGTAGGTTTTGAAGCGCCA 58.318 45.000 2.29 0.00 0.00 5.69
1272 1612 4.357918 AGCGCCAAATCTGAGGTATAAT 57.642 40.909 2.29 0.00 0.00 1.28
1273 1613 4.067896 AGCGCCAAATCTGAGGTATAATG 58.932 43.478 2.29 0.00 0.00 1.90
1276 1616 5.221048 GCGCCAAATCTGAGGTATAATGTTT 60.221 40.000 0.00 0.00 0.00 2.83
1277 1617 6.680378 GCGCCAAATCTGAGGTATAATGTTTT 60.680 38.462 0.00 0.00 0.00 2.43
1278 1618 7.257722 CGCCAAATCTGAGGTATAATGTTTTT 58.742 34.615 0.00 0.00 0.00 1.94
1279 1619 7.220683 CGCCAAATCTGAGGTATAATGTTTTTG 59.779 37.037 0.00 0.00 0.00 2.44
1280 1620 7.010460 GCCAAATCTGAGGTATAATGTTTTTGC 59.990 37.037 0.00 0.00 0.00 3.68
1281 1621 8.034215 CCAAATCTGAGGTATAATGTTTTTGCA 58.966 33.333 0.00 0.00 0.00 4.08
1282 1622 8.863049 CAAATCTGAGGTATAATGTTTTTGCAC 58.137 33.333 0.00 0.00 0.00 4.57
1283 1623 7.944729 ATCTGAGGTATAATGTTTTTGCACT 57.055 32.000 0.00 0.00 0.00 4.40
1284 1624 7.144722 TCTGAGGTATAATGTTTTTGCACTG 57.855 36.000 0.00 0.00 0.00 3.66
1285 1625 5.708948 TGAGGTATAATGTTTTTGCACTGC 58.291 37.500 0.00 0.00 0.00 4.40
1286 1626 5.072040 AGGTATAATGTTTTTGCACTGCC 57.928 39.130 0.00 0.00 0.00 4.85
1287 1627 4.526262 AGGTATAATGTTTTTGCACTGCCA 59.474 37.500 0.00 0.00 0.00 4.92
1288 1628 4.625311 GGTATAATGTTTTTGCACTGCCAC 59.375 41.667 0.00 0.00 0.00 5.01
1289 1629 1.569708 AATGTTTTTGCACTGCCACG 58.430 45.000 0.00 0.00 0.00 4.94
1290 1630 0.743688 ATGTTTTTGCACTGCCACGA 59.256 45.000 0.00 0.00 0.00 4.35
1291 1631 0.528017 TGTTTTTGCACTGCCACGAA 59.472 45.000 0.00 0.00 0.00 3.85
1292 1632 1.135915 TGTTTTTGCACTGCCACGAAT 59.864 42.857 0.00 0.00 0.00 3.34
1293 1633 2.200899 GTTTTTGCACTGCCACGAATT 58.799 42.857 0.00 0.00 0.00 2.17
1294 1634 2.593346 TTTTGCACTGCCACGAATTT 57.407 40.000 0.00 0.00 0.00 1.82
1295 1635 1.850377 TTTGCACTGCCACGAATTTG 58.150 45.000 0.00 0.00 0.00 2.32
1296 1636 1.028130 TTGCACTGCCACGAATTTGA 58.972 45.000 0.00 0.00 0.00 2.69
1297 1637 1.246649 TGCACTGCCACGAATTTGAT 58.753 45.000 0.00 0.00 0.00 2.57
1298 1638 1.612950 TGCACTGCCACGAATTTGATT 59.387 42.857 0.00 0.00 0.00 2.57
1299 1639 2.816672 TGCACTGCCACGAATTTGATTA 59.183 40.909 0.00 0.00 0.00 1.75
1300 1640 3.119884 TGCACTGCCACGAATTTGATTAG 60.120 43.478 0.00 0.00 0.00 1.73
1301 1641 3.429085 CACTGCCACGAATTTGATTAGC 58.571 45.455 0.00 0.00 0.00 3.09
1302 1642 3.081061 ACTGCCACGAATTTGATTAGCA 58.919 40.909 0.00 2.15 0.00 3.49
1303 1643 3.696051 ACTGCCACGAATTTGATTAGCAT 59.304 39.130 0.00 0.00 0.00 3.79
1304 1644 4.881273 ACTGCCACGAATTTGATTAGCATA 59.119 37.500 0.00 0.00 0.00 3.14
1305 1645 5.008019 ACTGCCACGAATTTGATTAGCATAG 59.992 40.000 0.00 0.00 0.00 2.23
1306 1646 5.122519 TGCCACGAATTTGATTAGCATAGA 58.877 37.500 0.00 0.00 0.00 1.98
1307 1647 5.764686 TGCCACGAATTTGATTAGCATAGAT 59.235 36.000 0.00 0.00 0.00 1.98
1308 1648 6.262944 TGCCACGAATTTGATTAGCATAGATT 59.737 34.615 0.00 0.00 0.00 2.40
1309 1649 6.580041 GCCACGAATTTGATTAGCATAGATTG 59.420 38.462 0.00 0.00 0.00 2.67
1310 1650 7.080099 CCACGAATTTGATTAGCATAGATTGG 58.920 38.462 0.00 0.00 0.00 3.16
1311 1651 7.255242 CCACGAATTTGATTAGCATAGATTGGT 60.255 37.037 0.00 0.00 39.88 3.67
1312 1652 7.800380 CACGAATTTGATTAGCATAGATTGGTC 59.200 37.037 0.00 0.00 37.26 4.02
1313 1653 7.716998 ACGAATTTGATTAGCATAGATTGGTCT 59.283 33.333 0.00 0.00 37.26 3.85
1314 1654 8.226448 CGAATTTGATTAGCATAGATTGGTCTC 58.774 37.037 0.00 0.00 37.26 3.36
1315 1655 9.282569 GAATTTGATTAGCATAGATTGGTCTCT 57.717 33.333 0.00 0.00 37.26 3.10
1319 1659 9.770097 TTGATTAGCATAGATTGGTCTCTAAAG 57.230 33.333 0.00 0.00 37.26 1.85
1320 1660 7.875041 TGATTAGCATAGATTGGTCTCTAAAGC 59.125 37.037 0.00 0.00 37.26 3.51
1321 1661 4.967036 AGCATAGATTGGTCTCTAAAGCC 58.033 43.478 0.00 0.00 35.28 4.35
1322 1662 4.068599 GCATAGATTGGTCTCTAAAGCCC 58.931 47.826 0.00 0.00 35.87 5.19
1323 1663 4.646572 CATAGATTGGTCTCTAAAGCCCC 58.353 47.826 0.00 0.00 35.87 5.80
1324 1664 1.847088 AGATTGGTCTCTAAAGCCCCC 59.153 52.381 0.00 0.00 0.00 5.40
1325 1665 1.847088 GATTGGTCTCTAAAGCCCCCT 59.153 52.381 0.00 0.00 0.00 4.79
1326 1666 0.991920 TTGGTCTCTAAAGCCCCCTG 59.008 55.000 0.00 0.00 0.00 4.45
1327 1667 1.224870 GGTCTCTAAAGCCCCCTGC 59.775 63.158 0.00 0.00 41.71 4.85
1341 1681 3.884350 CTGCGCTGCGGCATTCAT 61.884 61.111 24.61 0.00 42.99 2.57
1342 1682 3.802008 CTGCGCTGCGGCATTCATC 62.802 63.158 24.61 4.60 42.99 2.92
1343 1683 3.879682 GCGCTGCGGCATTCATCA 61.880 61.111 24.61 0.00 38.60 3.07
1344 1684 2.023741 CGCTGCGGCATTCATCAC 59.976 61.111 19.50 0.00 38.60 3.06
1345 1685 2.752939 CGCTGCGGCATTCATCACA 61.753 57.895 19.50 0.00 38.60 3.58
1349 1689 1.265095 CTGCGGCATTCATCACATACC 59.735 52.381 1.75 0.00 0.00 2.73
1362 1710 3.119319 TCACATACCCTGGGCAAATAGA 58.881 45.455 14.08 1.21 0.00 1.98
1363 1711 3.721575 TCACATACCCTGGGCAAATAGAT 59.278 43.478 14.08 0.00 0.00 1.98
1365 1713 4.520492 CACATACCCTGGGCAAATAGATTC 59.480 45.833 14.08 0.00 0.00 2.52
1368 1716 2.175715 ACCCTGGGCAAATAGATTCTCC 59.824 50.000 14.08 0.00 0.00 3.71
1369 1717 2.444766 CCCTGGGCAAATAGATTCTCCT 59.555 50.000 0.00 0.00 0.00 3.69
1371 1719 4.540715 CCTGGGCAAATAGATTCTCCTTT 58.459 43.478 0.00 0.00 0.00 3.11
1372 1720 4.582240 CCTGGGCAAATAGATTCTCCTTTC 59.418 45.833 0.00 0.00 0.00 2.62
1373 1721 4.536765 TGGGCAAATAGATTCTCCTTTCC 58.463 43.478 0.00 0.00 0.00 3.13
1374 1722 4.230502 TGGGCAAATAGATTCTCCTTTCCT 59.769 41.667 0.00 0.00 0.00 3.36
1375 1723 4.824537 GGGCAAATAGATTCTCCTTTCCTC 59.175 45.833 0.00 0.00 0.00 3.71
1385 1733 6.498651 AGATTCTCCTTTCCTCAGTGTTCTTA 59.501 38.462 0.00 0.00 0.00 2.10
1403 1751 2.830651 TAACACAGTTTGGGGTTGGT 57.169 45.000 0.00 0.00 0.00 3.67
1411 2443 5.303333 CACAGTTTGGGGTTGGTATTTTAGT 59.697 40.000 0.00 0.00 0.00 2.24
1412 2444 5.303333 ACAGTTTGGGGTTGGTATTTTAGTG 59.697 40.000 0.00 0.00 0.00 2.74
1415 2447 3.426615 TGGGGTTGGTATTTTAGTGCTG 58.573 45.455 0.00 0.00 0.00 4.41
1416 2448 2.165641 GGGGTTGGTATTTTAGTGCTGC 59.834 50.000 0.00 0.00 0.00 5.25
1421 2453 5.154222 GTTGGTATTTTAGTGCTGCTGTTC 58.846 41.667 0.00 0.00 0.00 3.18
1422 2454 3.756434 TGGTATTTTAGTGCTGCTGTTCC 59.244 43.478 0.00 0.00 0.00 3.62
1424 2456 3.923017 ATTTTAGTGCTGCTGTTCCAC 57.077 42.857 0.00 0.00 0.00 4.02
1425 2457 1.604604 TTTAGTGCTGCTGTTCCACC 58.395 50.000 0.00 0.00 0.00 4.61
1426 2458 0.602638 TTAGTGCTGCTGTTCCACCG 60.603 55.000 0.00 0.00 0.00 4.94
1433 2465 1.942657 CTGCTGTTCCACCGGAATATG 59.057 52.381 9.46 0.00 44.04 1.78
1460 2500 9.426837 GTTTTTACCGCCTTTTTATCCTTTTAT 57.573 29.630 0.00 0.00 0.00 1.40
1494 2534 5.116528 GCTACGAAAATTTACAGCAACCAAC 59.883 40.000 0.00 0.00 0.00 3.77
1495 2535 5.000012 ACGAAAATTTACAGCAACCAACA 58.000 34.783 0.00 0.00 0.00 3.33
1498 2538 5.518487 CGAAAATTTACAGCAACCAACAAGT 59.482 36.000 0.00 0.00 0.00 3.16
1499 2539 6.291585 CGAAAATTTACAGCAACCAACAAGTC 60.292 38.462 0.00 0.00 0.00 3.01
1500 2540 5.852282 AATTTACAGCAACCAACAAGTCT 57.148 34.783 0.00 0.00 0.00 3.24
1501 2541 4.893424 TTTACAGCAACCAACAAGTCTC 57.107 40.909 0.00 0.00 0.00 3.36
1502 2542 2.418368 ACAGCAACCAACAAGTCTCA 57.582 45.000 0.00 0.00 0.00 3.27
1505 2545 1.064758 AGCAACCAACAAGTCTCACCA 60.065 47.619 0.00 0.00 0.00 4.17
1528 2574 4.191544 TGAACGGATTCTGATTGCCTAAG 58.808 43.478 0.00 0.00 35.69 2.18
1533 2579 5.710099 ACGGATTCTGATTGCCTAAGAAAAA 59.290 36.000 0.00 0.00 33.86 1.94
1595 2645 1.588861 GCTGATAAAGTCGCTTCGTCC 59.411 52.381 0.00 0.00 0.00 4.79
1602 2652 1.298938 GTCGCTTCGTCCGGATACC 60.299 63.158 7.81 0.00 0.00 2.73
1792 4059 5.527582 ACCTGATTTCAGTTTACACAGTGTC 59.472 40.000 10.23 0.00 42.27 3.67
1799 4066 5.666462 TCAGTTTACACAGTGTCAGCTAAA 58.334 37.500 10.23 1.73 0.00 1.85
1801 4068 5.753438 CAGTTTACACAGTGTCAGCTAAAGA 59.247 40.000 10.23 0.00 0.00 2.52
1802 4069 5.753921 AGTTTACACAGTGTCAGCTAAAGAC 59.246 40.000 10.23 0.00 36.55 3.01
1803 4070 5.531122 TTACACAGTGTCAGCTAAAGACT 57.469 39.130 10.23 0.00 36.94 3.24
1810 5470 7.115095 CACAGTGTCAGCTAAAGACTAAGTAAC 59.885 40.741 0.00 0.00 36.94 2.50
1812 5472 6.267014 AGTGTCAGCTAAAGACTAAGTAACCA 59.733 38.462 4.51 0.00 36.94 3.67
1814 5474 7.116519 GTGTCAGCTAAAGACTAAGTAACCAAG 59.883 40.741 4.51 0.00 36.94 3.61
1817 5477 5.546887 AGCTAAAGACTAAGTAACCAAGGGT 59.453 40.000 0.00 0.00 37.65 4.34
1818 5478 5.642491 GCTAAAGACTAAGTAACCAAGGGTG 59.358 44.000 0.00 0.00 35.34 4.61
1836 5496 7.260603 CAAGGGTGGAGAAATGATGATAAAAC 58.739 38.462 0.00 0.00 0.00 2.43
1843 5503 9.135189 TGGAGAAATGATGATAAAACCAATAGG 57.865 33.333 0.00 0.00 42.21 2.57
1911 5571 8.303156 AGAAGATGTATGATATTCTCCTGTTCG 58.697 37.037 0.00 0.00 0.00 3.95
1923 5583 2.548480 CTCCTGTTCGGTTTCTCCAAAC 59.452 50.000 0.00 0.00 41.22 2.93
1991 5687 4.246458 GAGATGTCACACTTAACCTGTCC 58.754 47.826 0.00 0.00 0.00 4.02
2068 5765 6.239402 CCAGTCCCATTTTGATTCTTCTTTGT 60.239 38.462 0.00 0.00 0.00 2.83
2069 5766 6.865205 CAGTCCCATTTTGATTCTTCTTTGTC 59.135 38.462 0.00 0.00 0.00 3.18
2070 5767 6.550854 AGTCCCATTTTGATTCTTCTTTGTCA 59.449 34.615 0.00 0.00 0.00 3.58
2108 5830 8.833231 ATCTAGTACATGAATAAATTGGTCCG 57.167 34.615 0.00 0.00 0.00 4.79
2223 5945 2.570302 GGGGTGGTAAGCTAAGAACTCA 59.430 50.000 0.00 0.00 0.00 3.41
2227 5949 4.870991 GGTGGTAAGCTAAGAACTCATGTC 59.129 45.833 0.00 0.00 0.00 3.06
2305 6027 9.294030 GTTTATTTTCTCCACATATCAGCAAAG 57.706 33.333 0.00 0.00 0.00 2.77
2341 6063 2.838736 GCGAAGGCTAATGAGATCCAA 58.161 47.619 0.00 0.00 35.83 3.53
2452 6174 6.780706 ACACTTCAAATTCTTACACTACGG 57.219 37.500 0.00 0.00 0.00 4.02
2628 7035 8.367911 TCTATAACATGTGATATGACCAAGACC 58.632 37.037 3.22 0.00 0.00 3.85
2860 7281 7.759489 TGAACTTGTTTTAGGTTCATATGCT 57.241 32.000 0.00 0.00 46.55 3.79
2861 7282 8.856153 TGAACTTGTTTTAGGTTCATATGCTA 57.144 30.769 0.00 0.00 46.55 3.49
2862 7283 8.946085 TGAACTTGTTTTAGGTTCATATGCTAG 58.054 33.333 0.00 0.00 46.55 3.42
2863 7284 8.863872 AACTTGTTTTAGGTTCATATGCTAGT 57.136 30.769 0.00 0.00 0.00 2.57
2864 7285 8.268850 ACTTGTTTTAGGTTCATATGCTAGTG 57.731 34.615 0.00 0.00 0.00 2.74
3227 7739 8.527810 GGGACCATGTTTAATAAAGTTTCATCA 58.472 33.333 0.00 0.00 0.00 3.07
3484 8016 9.295825 AGTAATAAATGGTTGATGTGACAAGAA 57.704 29.630 0.00 0.00 0.00 2.52
3489 8021 5.651387 TGGTTGATGTGACAAGAAACAAA 57.349 34.783 9.54 0.00 0.00 2.83
3507 8040 3.245264 ACAAAAGTGGTAGAATGGGAGGG 60.245 47.826 0.00 0.00 0.00 4.30
3638 8175 5.355071 GTGCATGGTAGAACATCATTTCTCA 59.645 40.000 0.00 0.00 37.09 3.27
3639 8176 5.587443 TGCATGGTAGAACATCATTTCTCAG 59.413 40.000 0.00 0.00 37.09 3.35
3640 8177 5.587844 GCATGGTAGAACATCATTTCTCAGT 59.412 40.000 0.00 0.00 37.09 3.41
3641 8178 6.457934 GCATGGTAGAACATCATTTCTCAGTG 60.458 42.308 0.00 0.00 37.09 3.66
3642 8179 6.358974 TGGTAGAACATCATTTCTCAGTGA 57.641 37.500 0.00 0.00 37.09 3.41
3643 8180 6.166279 TGGTAGAACATCATTTCTCAGTGAC 58.834 40.000 0.00 0.00 37.09 3.67
3644 8181 5.582665 GGTAGAACATCATTTCTCAGTGACC 59.417 44.000 0.00 0.00 37.09 4.02
3645 8182 5.495926 AGAACATCATTTCTCAGTGACCT 57.504 39.130 0.00 0.00 29.24 3.85
3646 8183 6.611613 AGAACATCATTTCTCAGTGACCTA 57.388 37.500 0.00 0.00 29.24 3.08
3647 8184 7.009179 AGAACATCATTTCTCAGTGACCTAA 57.991 36.000 0.00 0.00 29.24 2.69
3852 8389 6.469782 ACTTGACATTAATATTTGGGCCTG 57.530 37.500 4.53 0.00 0.00 4.85
3860 8397 2.071778 TATTTGGGCCTGCAGATTCC 57.928 50.000 17.39 13.66 0.00 3.01
4039 8579 6.539826 TCTGCTTATGTATCCACTGAAATGTG 59.460 38.462 0.00 0.00 37.66 3.21
4054 8594 1.794714 ATGTGCTCCCTCCGTTCTAT 58.205 50.000 0.00 0.00 0.00 1.98
4055 8595 1.568504 TGTGCTCCCTCCGTTCTATT 58.431 50.000 0.00 0.00 0.00 1.73
4125 8665 4.458989 TCACTTACTTTGGTCCGTACGTAT 59.541 41.667 15.21 0.00 0.00 3.06
4417 8963 8.368668 GCCTAGTTTTCTACATGGTATACAGAT 58.631 37.037 5.01 0.00 0.00 2.90
4869 11994 2.768527 TCTCAAGGATCTTCTGCGGATT 59.231 45.455 0.00 0.00 0.00 3.01
4884 12009 1.746861 CGGATTATTCTGGTGCAGCCA 60.747 52.381 14.36 10.47 46.95 4.75
4927 12052 4.218635 TCTTCTACAGCAACTTGATCGACT 59.781 41.667 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.977244 GTGGCGGCAGGGTGTTTG 61.977 66.667 13.91 0.00 0.00 2.93
15 16 4.760047 CTGGTTCGGAGGTGGCGG 62.760 72.222 0.00 0.00 0.00 6.13
18 19 3.636231 TGGCTGGTTCGGAGGTGG 61.636 66.667 0.00 0.00 0.00 4.61
19 20 2.358737 GTGGCTGGTTCGGAGGTG 60.359 66.667 0.00 0.00 0.00 4.00
20 21 2.185310 GATGTGGCTGGTTCGGAGGT 62.185 60.000 0.00 0.00 0.00 3.85
21 22 1.450312 GATGTGGCTGGTTCGGAGG 60.450 63.158 0.00 0.00 0.00 4.30
22 23 0.107508 ATGATGTGGCTGGTTCGGAG 60.108 55.000 0.00 0.00 0.00 4.63
23 24 0.107703 GATGATGTGGCTGGTTCGGA 60.108 55.000 0.00 0.00 0.00 4.55
24 25 0.392863 TGATGATGTGGCTGGTTCGG 60.393 55.000 0.00 0.00 0.00 4.30
25 26 1.012086 CTGATGATGTGGCTGGTTCG 58.988 55.000 0.00 0.00 0.00 3.95
26 27 0.737219 GCTGATGATGTGGCTGGTTC 59.263 55.000 0.00 0.00 0.00 3.62
27 28 0.038599 TGCTGATGATGTGGCTGGTT 59.961 50.000 0.00 0.00 0.00 3.67
28 29 0.393944 CTGCTGATGATGTGGCTGGT 60.394 55.000 0.00 0.00 0.00 4.00
29 30 1.101635 CCTGCTGATGATGTGGCTGG 61.102 60.000 0.00 0.00 37.43 4.85
30 31 1.725557 GCCTGCTGATGATGTGGCTG 61.726 60.000 0.00 0.00 37.58 4.85
31 32 1.453379 GCCTGCTGATGATGTGGCT 60.453 57.895 0.00 0.00 37.58 4.75
32 33 2.831366 CGCCTGCTGATGATGTGGC 61.831 63.158 0.00 0.00 37.24 5.01
33 34 2.831366 GCGCCTGCTGATGATGTGG 61.831 63.158 0.00 0.00 38.39 4.17
34 35 2.713770 GCGCCTGCTGATGATGTG 59.286 61.111 0.00 0.00 38.39 3.21
35 36 2.893895 CGCGCCTGCTGATGATGT 60.894 61.111 0.00 0.00 39.65 3.06
36 37 2.893895 ACGCGCCTGCTGATGATG 60.894 61.111 5.73 0.00 39.65 3.07
37 38 2.296814 TACACGCGCCTGCTGATGAT 62.297 55.000 5.73 0.00 39.65 2.45
38 39 3.000693 TACACGCGCCTGCTGATGA 62.001 57.895 5.73 0.00 39.65 2.92
39 40 2.509111 TACACGCGCCTGCTGATG 60.509 61.111 5.73 0.00 39.65 3.07
40 41 2.509336 GTACACGCGCCTGCTGAT 60.509 61.111 5.73 0.00 39.65 2.90
41 42 4.735132 GGTACACGCGCCTGCTGA 62.735 66.667 5.73 0.00 39.65 4.26
50 51 2.416260 GATCTCCGGGGTACACGC 59.584 66.667 0.00 0.00 0.00 5.34
51 52 1.735376 CTGGATCTCCGGGGTACACG 61.735 65.000 0.00 0.00 38.76 4.49
52 53 2.125178 CTGGATCTCCGGGGTACAC 58.875 63.158 0.00 0.00 38.76 2.90
53 54 4.699192 CTGGATCTCCGGGGTACA 57.301 61.111 0.00 0.00 38.76 2.90
64 65 4.918201 CTTCGGCCGGCCTGGATC 62.918 72.222 41.01 16.13 42.00 3.36
72 73 4.776322 TGCATGACCTTCGGCCGG 62.776 66.667 27.83 12.37 0.00 6.13
73 74 2.514592 ATGCATGACCTTCGGCCG 60.515 61.111 22.12 22.12 0.00 6.13
74 75 1.451927 TGATGCATGACCTTCGGCC 60.452 57.895 2.46 0.00 0.00 6.13
75 76 1.723870 GTGATGCATGACCTTCGGC 59.276 57.895 2.46 0.00 0.00 5.54
76 77 0.460109 TCGTGATGCATGACCTTCGG 60.460 55.000 10.86 0.00 0.00 4.30
77 78 0.926155 CTCGTGATGCATGACCTTCG 59.074 55.000 10.86 0.00 0.00 3.79
78 79 0.654683 GCTCGTGATGCATGACCTTC 59.345 55.000 10.86 0.00 0.00 3.46
79 80 1.086067 CGCTCGTGATGCATGACCTT 61.086 55.000 10.86 0.00 0.00 3.50
80 81 1.520120 CGCTCGTGATGCATGACCT 60.520 57.895 10.86 0.00 0.00 3.85
81 82 2.528743 CCGCTCGTGATGCATGACC 61.529 63.158 10.86 0.00 0.00 4.02
82 83 1.519234 TCCGCTCGTGATGCATGAC 60.519 57.895 2.46 4.63 0.00 3.06
83 84 1.519234 GTCCGCTCGTGATGCATGA 60.519 57.895 2.46 0.00 0.00 3.07
84 85 2.528743 GGTCCGCTCGTGATGCATG 61.529 63.158 2.46 0.00 0.00 4.06
85 86 2.202932 GGTCCGCTCGTGATGCAT 60.203 61.111 0.00 0.00 0.00 3.96
86 87 3.647649 CTGGTCCGCTCGTGATGCA 62.648 63.158 0.00 0.00 0.00 3.96
87 88 2.887568 CTGGTCCGCTCGTGATGC 60.888 66.667 0.00 0.00 0.00 3.91
88 89 2.021068 ATCCTGGTCCGCTCGTGATG 62.021 60.000 0.00 0.00 0.00 3.07
89 90 1.739338 GATCCTGGTCCGCTCGTGAT 61.739 60.000 0.00 0.00 0.00 3.06
90 91 2.362503 ATCCTGGTCCGCTCGTGA 60.363 61.111 0.00 0.00 0.00 4.35
91 92 2.105128 GATCCTGGTCCGCTCGTG 59.895 66.667 0.00 0.00 0.00 4.35
92 93 3.518998 CGATCCTGGTCCGCTCGT 61.519 66.667 0.00 0.00 0.00 4.18
93 94 4.933064 GCGATCCTGGTCCGCTCG 62.933 72.222 21.36 12.14 44.83 5.03
96 97 4.593864 GAGGCGATCCTGGTCCGC 62.594 72.222 20.82 20.82 44.46 5.54
97 98 3.917760 GGAGGCGATCCTGGTCCG 61.918 72.222 0.00 0.00 44.46 4.79
104 105 1.287503 GTCAGATCGGAGGCGATCC 59.712 63.158 2.08 0.00 44.03 3.36
105 106 1.081774 CGTCAGATCGGAGGCGATC 60.082 63.158 0.00 0.00 43.50 3.69
106 107 1.511318 CTCGTCAGATCGGAGGCGAT 61.511 60.000 11.74 0.00 0.00 4.58
107 108 2.124860 TCGTCAGATCGGAGGCGA 60.125 61.111 10.24 9.17 0.00 5.54
108 109 2.329690 CTCGTCAGATCGGAGGCG 59.670 66.667 10.24 7.04 0.00 5.52
109 110 2.725008 CCTCGTCAGATCGGAGGC 59.275 66.667 10.24 0.00 0.00 4.70
110 111 2.196925 CCCCTCGTCAGATCGGAGG 61.197 68.421 8.98 8.98 0.00 4.30
111 112 1.152943 TCCCCTCGTCAGATCGGAG 60.153 63.158 0.00 0.00 0.00 4.63
112 113 1.152943 CTCCCCTCGTCAGATCGGA 60.153 63.158 0.00 0.00 0.00 4.55
113 114 2.851071 GCTCCCCTCGTCAGATCGG 61.851 68.421 0.00 0.00 0.00 4.18
114 115 2.725008 GCTCCCCTCGTCAGATCG 59.275 66.667 0.00 0.00 0.00 3.69
115 116 2.503382 GGGCTCCCCTCGTCAGATC 61.503 68.421 0.00 0.00 41.34 2.75
116 117 2.444895 GGGCTCCCCTCGTCAGAT 60.445 66.667 0.00 0.00 41.34 2.90
138 139 4.864334 GGTCATGGCGCAGGGAGG 62.864 72.222 10.83 0.00 0.00 4.30
139 140 3.790437 AGGTCATGGCGCAGGGAG 61.790 66.667 10.83 0.00 0.00 4.30
140 141 4.100084 CAGGTCATGGCGCAGGGA 62.100 66.667 10.83 0.00 0.00 4.20
188 189 2.186125 GTAGGCCGGTTTCCCTCG 59.814 66.667 1.90 0.00 32.65 4.63
189 190 1.969200 GAGGTAGGCCGGTTTCCCTC 61.969 65.000 13.97 13.97 40.50 4.30
190 191 1.993948 GAGGTAGGCCGGTTTCCCT 60.994 63.158 1.90 2.96 40.50 4.20
191 192 2.295602 TGAGGTAGGCCGGTTTCCC 61.296 63.158 1.90 0.00 40.50 3.97
192 193 1.078637 GTGAGGTAGGCCGGTTTCC 60.079 63.158 1.90 0.00 40.50 3.13
193 194 1.078637 GGTGAGGTAGGCCGGTTTC 60.079 63.158 1.90 0.00 40.50 2.78
194 195 2.951101 CGGTGAGGTAGGCCGGTTT 61.951 63.158 1.90 0.00 41.60 3.27
195 196 3.387947 CGGTGAGGTAGGCCGGTT 61.388 66.667 1.90 0.00 41.60 4.44
196 197 4.371417 TCGGTGAGGTAGGCCGGT 62.371 66.667 1.90 0.00 44.97 5.28
197 198 3.834799 GTCGGTGAGGTAGGCCGG 61.835 72.222 0.00 0.00 44.97 6.13
198 199 4.189188 CGTCGGTGAGGTAGGCCG 62.189 72.222 0.00 0.00 46.12 6.13
199 200 2.753043 TCGTCGGTGAGGTAGGCC 60.753 66.667 0.00 0.00 0.00 5.19
200 201 2.799371 CTCGTCGGTGAGGTAGGC 59.201 66.667 0.00 0.00 32.18 3.93
201 202 2.044555 TGCTCGTCGGTGAGGTAGG 61.045 63.158 6.90 0.00 36.47 3.18
202 203 1.136984 GTGCTCGTCGGTGAGGTAG 59.863 63.158 6.90 0.00 36.47 3.18
203 204 1.303074 AGTGCTCGTCGGTGAGGTA 60.303 57.895 6.90 0.00 36.47 3.08
204 205 2.597805 AGTGCTCGTCGGTGAGGT 60.598 61.111 6.90 0.00 36.47 3.85
205 206 2.179517 GAGTGCTCGTCGGTGAGG 59.820 66.667 6.90 0.00 36.47 3.86
206 207 2.179517 GGAGTGCTCGTCGGTGAG 59.820 66.667 0.00 1.05 39.05 3.51
207 208 3.371063 GGGAGTGCTCGTCGGTGA 61.371 66.667 0.00 0.00 0.00 4.02
208 209 4.436998 GGGGAGTGCTCGTCGGTG 62.437 72.222 0.00 0.00 0.00 4.94
229 230 3.491652 GGACAGCGCTTCTTCGGC 61.492 66.667 7.50 0.00 0.00 5.54
230 231 3.181967 CGGACAGCGCTTCTTCGG 61.182 66.667 7.50 5.35 0.00 4.30
231 232 3.843240 GCGGACAGCGCTTCTTCG 61.843 66.667 7.50 7.82 35.41 3.79
261 262 4.593864 GTCCGGATCTGAGGCGCC 62.594 72.222 21.89 21.89 0.00 6.53
262 263 4.593864 GGTCCGGATCTGAGGCGC 62.594 72.222 7.81 0.00 0.00 6.53
263 264 3.917760 GGGTCCGGATCTGAGGCG 61.918 72.222 15.87 0.00 0.00 5.52
264 265 2.444895 AGGGTCCGGATCTGAGGC 60.445 66.667 15.87 0.00 0.00 4.70
265 266 1.075970 TGAGGGTCCGGATCTGAGG 60.076 63.158 15.87 0.00 0.00 3.86
266 267 1.395826 GGTGAGGGTCCGGATCTGAG 61.396 65.000 15.87 0.00 0.00 3.35
267 268 1.381327 GGTGAGGGTCCGGATCTGA 60.381 63.158 15.87 3.63 0.00 3.27
268 269 1.685765 TGGTGAGGGTCCGGATCTG 60.686 63.158 15.87 0.00 0.00 2.90
269 270 1.686110 GTGGTGAGGGTCCGGATCT 60.686 63.158 15.87 12.36 0.00 2.75
270 271 2.732619 GGTGGTGAGGGTCCGGATC 61.733 68.421 7.81 6.88 0.00 3.36
271 272 2.687566 GGTGGTGAGGGTCCGGAT 60.688 66.667 7.81 0.00 0.00 4.18
274 275 2.781595 CTTTCGGTGGTGAGGGTCCG 62.782 65.000 0.00 0.00 43.65 4.79
275 276 1.003718 CTTTCGGTGGTGAGGGTCC 60.004 63.158 0.00 0.00 0.00 4.46
276 277 1.003718 CCTTTCGGTGGTGAGGGTC 60.004 63.158 0.00 0.00 0.00 4.46
277 278 2.526046 CCCTTTCGGTGGTGAGGGT 61.526 63.158 0.00 0.00 43.18 4.34
278 279 2.351276 CCCTTTCGGTGGTGAGGG 59.649 66.667 0.00 0.00 42.66 4.30
279 280 0.107654 GATCCCTTTCGGTGGTGAGG 60.108 60.000 0.00 0.00 0.00 3.86
280 281 0.460284 CGATCCCTTTCGGTGGTGAG 60.460 60.000 0.00 0.00 35.50 3.51
281 282 1.594833 CGATCCCTTTCGGTGGTGA 59.405 57.895 0.00 0.00 35.50 4.02
282 283 4.201951 CGATCCCTTTCGGTGGTG 57.798 61.111 0.00 0.00 35.50 4.17
288 289 2.205074 CAATCTGACCGATCCCTTTCG 58.795 52.381 0.00 0.00 38.83 3.46
289 290 2.565841 CCAATCTGACCGATCCCTTTC 58.434 52.381 0.00 0.00 0.00 2.62
290 291 1.212935 CCCAATCTGACCGATCCCTTT 59.787 52.381 0.00 0.00 0.00 3.11
291 292 0.839946 CCCAATCTGACCGATCCCTT 59.160 55.000 0.00 0.00 0.00 3.95
292 293 1.056700 CCCCAATCTGACCGATCCCT 61.057 60.000 0.00 0.00 0.00 4.20
293 294 1.451936 CCCCAATCTGACCGATCCC 59.548 63.158 0.00 0.00 0.00 3.85
294 295 1.054406 TCCCCCAATCTGACCGATCC 61.054 60.000 0.00 0.00 0.00 3.36
295 296 0.837272 TTCCCCCAATCTGACCGATC 59.163 55.000 0.00 0.00 0.00 3.69
296 297 0.839946 CTTCCCCCAATCTGACCGAT 59.160 55.000 0.00 0.00 0.00 4.18
297 298 0.546747 ACTTCCCCCAATCTGACCGA 60.547 55.000 0.00 0.00 0.00 4.69
298 299 0.392998 CACTTCCCCCAATCTGACCG 60.393 60.000 0.00 0.00 0.00 4.79
299 300 0.681243 GCACTTCCCCCAATCTGACC 60.681 60.000 0.00 0.00 0.00 4.02
300 301 0.329596 AGCACTTCCCCCAATCTGAC 59.670 55.000 0.00 0.00 0.00 3.51
301 302 0.329261 CAGCACTTCCCCCAATCTGA 59.671 55.000 0.00 0.00 0.00 3.27
302 303 0.682209 CCAGCACTTCCCCCAATCTG 60.682 60.000 0.00 0.00 0.00 2.90
303 304 0.846427 TCCAGCACTTCCCCCAATCT 60.846 55.000 0.00 0.00 0.00 2.40
304 305 0.259938 ATCCAGCACTTCCCCCAATC 59.740 55.000 0.00 0.00 0.00 2.67
305 306 0.259938 GATCCAGCACTTCCCCCAAT 59.740 55.000 0.00 0.00 0.00 3.16
306 307 1.691219 GATCCAGCACTTCCCCCAA 59.309 57.895 0.00 0.00 0.00 4.12
307 308 2.308722 GGATCCAGCACTTCCCCCA 61.309 63.158 6.95 0.00 0.00 4.96
308 309 2.597903 GGATCCAGCACTTCCCCC 59.402 66.667 6.95 0.00 0.00 5.40
309 310 2.597903 GGGATCCAGCACTTCCCC 59.402 66.667 15.23 0.00 42.88 4.81
310 311 2.190578 CGGGATCCAGCACTTCCC 59.809 66.667 15.23 4.43 44.83 3.97
311 312 2.514824 GCGGGATCCAGCACTTCC 60.515 66.667 29.20 1.07 0.00 3.46
312 313 2.514824 GGCGGGATCCAGCACTTC 60.515 66.667 33.41 15.81 34.54 3.01
313 314 2.826777 CTTGGCGGGATCCAGCACTT 62.827 60.000 33.41 0.00 37.44 3.16
314 315 3.329889 TTGGCGGGATCCAGCACT 61.330 61.111 33.41 0.00 37.44 4.40
315 316 2.825836 CTTGGCGGGATCCAGCAC 60.826 66.667 33.41 23.68 37.44 4.40
316 317 3.329542 GACTTGGCGGGATCCAGCA 62.330 63.158 33.41 19.23 37.44 4.41
317 318 2.514824 GACTTGGCGGGATCCAGC 60.515 66.667 26.79 26.79 37.44 4.85
318 319 2.202932 CGACTTGGCGGGATCCAG 60.203 66.667 15.23 11.38 37.44 3.86
319 320 4.467084 GCGACTTGGCGGGATCCA 62.467 66.667 15.23 0.00 0.00 3.41
396 397 4.400251 ACCTCCCTCCCCACCTCG 62.400 72.222 0.00 0.00 0.00 4.63
397 398 2.689034 CACCTCCCTCCCCACCTC 60.689 72.222 0.00 0.00 0.00 3.85
398 399 4.354943 CCACCTCCCTCCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
400 401 3.883822 TTCCCACCTCCCTCCCCAC 62.884 68.421 0.00 0.00 0.00 4.61
401 402 3.547737 TTCCCACCTCCCTCCCCA 61.548 66.667 0.00 0.00 0.00 4.96
402 403 2.692741 CTTCCCACCTCCCTCCCC 60.693 72.222 0.00 0.00 0.00 4.81
403 404 2.692741 CCTTCCCACCTCCCTCCC 60.693 72.222 0.00 0.00 0.00 4.30
404 405 1.541620 AACCTTCCCACCTCCCTCC 60.542 63.158 0.00 0.00 0.00 4.30
405 406 1.134438 ACAACCTTCCCACCTCCCTC 61.134 60.000 0.00 0.00 0.00 4.30
406 407 0.195096 TACAACCTTCCCACCTCCCT 59.805 55.000 0.00 0.00 0.00 4.20
407 408 0.618981 CTACAACCTTCCCACCTCCC 59.381 60.000 0.00 0.00 0.00 4.30
408 409 0.618981 CCTACAACCTTCCCACCTCC 59.381 60.000 0.00 0.00 0.00 4.30
409 410 0.035343 GCCTACAACCTTCCCACCTC 60.035 60.000 0.00 0.00 0.00 3.85
410 411 1.498176 GGCCTACAACCTTCCCACCT 61.498 60.000 0.00 0.00 0.00 4.00
411 412 1.001269 GGCCTACAACCTTCCCACC 60.001 63.158 0.00 0.00 0.00 4.61
412 413 1.376812 CGGCCTACAACCTTCCCAC 60.377 63.158 0.00 0.00 0.00 4.61
413 414 3.074281 CGGCCTACAACCTTCCCA 58.926 61.111 0.00 0.00 0.00 4.37
414 415 2.437895 GCGGCCTACAACCTTCCC 60.438 66.667 0.00 0.00 0.00 3.97
415 416 2.437895 GGCGGCCTACAACCTTCC 60.438 66.667 12.87 0.00 0.00 3.46
416 417 2.818274 CGGCGGCCTACAACCTTC 60.818 66.667 18.34 0.00 0.00 3.46
417 418 4.404098 CCGGCGGCCTACAACCTT 62.404 66.667 15.42 0.00 0.00 3.50
419 420 4.171103 ATCCGGCGGCCTACAACC 62.171 66.667 23.83 0.00 0.00 3.77
420 421 2.588034 GATCCGGCGGCCTACAAC 60.588 66.667 23.83 0.00 0.00 3.32
421 422 2.762459 AGATCCGGCGGCCTACAA 60.762 61.111 23.83 2.30 0.00 2.41
422 423 3.536917 CAGATCCGGCGGCCTACA 61.537 66.667 23.83 3.23 0.00 2.74
423 424 4.301027 CCAGATCCGGCGGCCTAC 62.301 72.222 23.83 11.96 0.00 3.18
428 429 4.547367 GGAACCCAGATCCGGCGG 62.547 72.222 22.51 22.51 0.00 6.13
470 471 3.873812 ATCATTCCCGTCCCCCGC 61.874 66.667 0.00 0.00 34.38 6.13
471 472 2.111043 CATCATTCCCGTCCCCCG 59.889 66.667 0.00 0.00 0.00 5.73
472 473 2.076184 TCCATCATTCCCGTCCCCC 61.076 63.158 0.00 0.00 0.00 5.40
473 474 1.148498 GTCCATCATTCCCGTCCCC 59.852 63.158 0.00 0.00 0.00 4.81
474 475 1.148498 GGTCCATCATTCCCGTCCC 59.852 63.158 0.00 0.00 0.00 4.46
475 476 1.148498 GGGTCCATCATTCCCGTCC 59.852 63.158 0.00 0.00 0.00 4.79
476 477 0.179045 CAGGGTCCATCATTCCCGTC 60.179 60.000 0.00 0.00 45.27 4.79
477 478 0.914417 ACAGGGTCCATCATTCCCGT 60.914 55.000 0.00 0.00 45.27 5.28
478 479 0.255890 AACAGGGTCCATCATTCCCG 59.744 55.000 0.00 0.00 45.27 5.14
479 480 2.532250 AAACAGGGTCCATCATTCCC 57.468 50.000 0.00 0.00 41.36 3.97
480 481 3.319122 GCATAAACAGGGTCCATCATTCC 59.681 47.826 0.00 0.00 0.00 3.01
481 482 3.319122 GGCATAAACAGGGTCCATCATTC 59.681 47.826 0.00 0.00 0.00 2.67
482 483 3.299503 GGCATAAACAGGGTCCATCATT 58.700 45.455 0.00 0.00 0.00 2.57
483 484 2.244510 TGGCATAAACAGGGTCCATCAT 59.755 45.455 0.00 0.00 0.00 2.45
484 485 1.638070 TGGCATAAACAGGGTCCATCA 59.362 47.619 0.00 0.00 0.00 3.07
485 486 2.301346 CTGGCATAAACAGGGTCCATC 58.699 52.381 0.00 0.00 32.38 3.51
486 487 2.442236 CTGGCATAAACAGGGTCCAT 57.558 50.000 0.00 0.00 32.38 3.41
487 488 3.976704 CTGGCATAAACAGGGTCCA 57.023 52.632 0.00 0.00 32.38 4.02
493 494 2.092968 TCTACCAGCCTGGCATAAACAG 60.093 50.000 22.65 9.76 42.67 3.16
494 495 1.912731 TCTACCAGCCTGGCATAAACA 59.087 47.619 22.65 0.00 42.67 2.83
495 496 2.710096 TCTACCAGCCTGGCATAAAC 57.290 50.000 22.65 0.00 42.67 2.01
496 497 2.683742 GCTTCTACCAGCCTGGCATAAA 60.684 50.000 22.65 2.46 42.67 1.40
497 498 1.134098 GCTTCTACCAGCCTGGCATAA 60.134 52.381 22.65 1.24 42.67 1.90
498 499 0.469917 GCTTCTACCAGCCTGGCATA 59.530 55.000 22.65 9.17 42.67 3.14
499 500 1.225704 GCTTCTACCAGCCTGGCAT 59.774 57.895 22.65 8.42 42.67 4.40
500 501 2.671070 GCTTCTACCAGCCTGGCA 59.329 61.111 22.65 0.00 42.67 4.92
501 502 2.512515 CGCTTCTACCAGCCTGGC 60.513 66.667 11.63 11.65 42.67 4.85
502 503 1.142748 CTCGCTTCTACCAGCCTGG 59.857 63.158 9.83 9.83 45.02 4.45
503 504 1.520342 GCTCGCTTCTACCAGCCTG 60.520 63.158 0.00 0.00 36.31 4.85
504 505 1.333636 ATGCTCGCTTCTACCAGCCT 61.334 55.000 0.00 0.00 36.31 4.58
505 506 0.878086 GATGCTCGCTTCTACCAGCC 60.878 60.000 0.00 0.00 36.31 4.85
506 507 0.179100 TGATGCTCGCTTCTACCAGC 60.179 55.000 6.39 0.00 36.33 4.85
507 508 2.299993 TTGATGCTCGCTTCTACCAG 57.700 50.000 6.39 0.00 0.00 4.00
508 509 2.554142 CATTGATGCTCGCTTCTACCA 58.446 47.619 6.39 0.00 0.00 3.25
541 542 9.264719 GGTCAACAGAAAATCAGAAAATTCAAT 57.735 29.630 0.00 0.00 0.00 2.57
542 543 8.256605 TGGTCAACAGAAAATCAGAAAATTCAA 58.743 29.630 0.00 0.00 0.00 2.69
543 544 7.780064 TGGTCAACAGAAAATCAGAAAATTCA 58.220 30.769 0.00 0.00 0.00 2.57
544 545 8.647143 TTGGTCAACAGAAAATCAGAAAATTC 57.353 30.769 0.00 0.00 0.00 2.17
546 547 9.696917 GTATTGGTCAACAGAAAATCAGAAAAT 57.303 29.630 0.00 0.00 0.00 1.82
547 548 7.860373 CGTATTGGTCAACAGAAAATCAGAAAA 59.140 33.333 0.00 0.00 0.00 2.29
548 549 7.012894 ACGTATTGGTCAACAGAAAATCAGAAA 59.987 33.333 0.00 0.00 0.00 2.52
549 550 6.485313 ACGTATTGGTCAACAGAAAATCAGAA 59.515 34.615 0.00 0.00 0.00 3.02
550 551 5.995282 ACGTATTGGTCAACAGAAAATCAGA 59.005 36.000 0.00 0.00 0.00 3.27
551 552 6.241207 ACGTATTGGTCAACAGAAAATCAG 57.759 37.500 0.00 0.00 0.00 2.90
552 553 6.261158 TCAACGTATTGGTCAACAGAAAATCA 59.739 34.615 0.00 0.00 36.39 2.57
553 554 6.664515 TCAACGTATTGGTCAACAGAAAATC 58.335 36.000 0.00 0.00 36.39 2.17
554 555 6.627395 TCAACGTATTGGTCAACAGAAAAT 57.373 33.333 0.00 0.00 36.39 1.82
555 556 5.504994 GCTCAACGTATTGGTCAACAGAAAA 60.505 40.000 0.00 0.00 36.39 2.29
556 557 4.024387 GCTCAACGTATTGGTCAACAGAAA 60.024 41.667 0.00 0.00 36.39 2.52
557 558 3.496884 GCTCAACGTATTGGTCAACAGAA 59.503 43.478 0.00 0.00 36.39 3.02
558 559 3.064207 GCTCAACGTATTGGTCAACAGA 58.936 45.455 0.00 0.00 36.39 3.41
559 560 2.805671 TGCTCAACGTATTGGTCAACAG 59.194 45.455 0.00 0.00 36.39 3.16
560 561 2.546368 GTGCTCAACGTATTGGTCAACA 59.454 45.455 0.00 0.00 36.39 3.33
561 562 2.546368 TGTGCTCAACGTATTGGTCAAC 59.454 45.455 0.00 0.00 36.39 3.18
562 563 2.839975 TGTGCTCAACGTATTGGTCAA 58.160 42.857 0.00 0.00 36.39 3.18
563 564 2.535012 TGTGCTCAACGTATTGGTCA 57.465 45.000 0.00 0.00 36.39 4.02
564 565 4.158384 CAATTGTGCTCAACGTATTGGTC 58.842 43.478 2.82 0.00 36.33 4.02
565 566 3.568007 ACAATTGTGCTCAACGTATTGGT 59.432 39.130 11.07 0.00 37.57 3.67
566 567 4.158384 GACAATTGTGCTCAACGTATTGG 58.842 43.478 17.58 0.00 37.57 3.16
567 568 3.840209 CGACAATTGTGCTCAACGTATTG 59.160 43.478 17.58 7.12 38.45 1.90
568 569 3.120338 CCGACAATTGTGCTCAACGTATT 60.120 43.478 17.58 0.00 36.33 1.89
569 570 2.415168 CCGACAATTGTGCTCAACGTAT 59.585 45.455 17.58 0.00 36.33 3.06
570 571 1.795872 CCGACAATTGTGCTCAACGTA 59.204 47.619 17.58 0.00 36.33 3.57
571 572 0.586319 CCGACAATTGTGCTCAACGT 59.414 50.000 17.58 4.32 36.33 3.99
572 573 0.865111 TCCGACAATTGTGCTCAACG 59.135 50.000 17.58 11.77 36.33 4.10
573 574 3.058293 TCATTCCGACAATTGTGCTCAAC 60.058 43.478 17.58 0.00 36.33 3.18
574 575 3.145286 TCATTCCGACAATTGTGCTCAA 58.855 40.909 17.58 3.31 37.98 3.02
575 576 2.777094 TCATTCCGACAATTGTGCTCA 58.223 42.857 17.58 0.00 0.00 4.26
576 577 3.436704 TCTTCATTCCGACAATTGTGCTC 59.563 43.478 17.58 0.20 0.00 4.26
577 578 3.411446 TCTTCATTCCGACAATTGTGCT 58.589 40.909 17.58 0.00 0.00 4.40
578 579 3.436704 TCTCTTCATTCCGACAATTGTGC 59.563 43.478 17.58 6.88 0.00 4.57
579 580 5.409520 TCTTCTCTTCATTCCGACAATTGTG 59.590 40.000 17.58 8.34 0.00 3.33
580 581 5.551233 TCTTCTCTTCATTCCGACAATTGT 58.449 37.500 11.78 11.78 0.00 2.71
581 582 6.486253 TTCTTCTCTTCATTCCGACAATTG 57.514 37.500 3.24 3.24 0.00 2.32
582 583 7.693969 ATTTCTTCTCTTCATTCCGACAATT 57.306 32.000 0.00 0.00 0.00 2.32
583 584 8.792830 TTATTTCTTCTCTTCATTCCGACAAT 57.207 30.769 0.00 0.00 0.00 2.71
584 585 8.615878 TTTATTTCTTCTCTTCATTCCGACAA 57.384 30.769 0.00 0.00 0.00 3.18
585 586 8.668353 CATTTATTTCTTCTCTTCATTCCGACA 58.332 33.333 0.00 0.00 0.00 4.35
586 587 8.883731 TCATTTATTTCTTCTCTTCATTCCGAC 58.116 33.333 0.00 0.00 0.00 4.79
587 588 9.618890 ATCATTTATTTCTTCTCTTCATTCCGA 57.381 29.630 0.00 0.00 0.00 4.55
619 620 9.679661 TCATAGTTAGAAGGCACATTTATTCAA 57.320 29.630 0.00 0.00 0.00 2.69
620 621 9.851686 ATCATAGTTAGAAGGCACATTTATTCA 57.148 29.630 0.00 0.00 0.00 2.57
622 623 9.851686 TCATCATAGTTAGAAGGCACATTTATT 57.148 29.630 0.00 0.00 0.00 1.40
623 624 9.851686 TTCATCATAGTTAGAAGGCACATTTAT 57.148 29.630 0.00 0.00 0.00 1.40
624 625 9.109393 GTTCATCATAGTTAGAAGGCACATTTA 57.891 33.333 0.00 0.00 0.00 1.40
625 626 7.611467 TGTTCATCATAGTTAGAAGGCACATTT 59.389 33.333 0.00 0.00 0.00 2.32
626 627 7.112122 TGTTCATCATAGTTAGAAGGCACATT 58.888 34.615 0.00 0.00 0.00 2.71
627 628 6.653020 TGTTCATCATAGTTAGAAGGCACAT 58.347 36.000 0.00 0.00 0.00 3.21
628 629 6.048732 TGTTCATCATAGTTAGAAGGCACA 57.951 37.500 0.00 0.00 0.00 4.57
629 630 6.818644 TCTTGTTCATCATAGTTAGAAGGCAC 59.181 38.462 0.00 0.00 0.00 5.01
630 631 6.946340 TCTTGTTCATCATAGTTAGAAGGCA 58.054 36.000 0.00 0.00 0.00 4.75
631 632 7.849804 TTCTTGTTCATCATAGTTAGAAGGC 57.150 36.000 0.00 0.00 0.00 4.35
639 640 9.696917 GACCAAAATTTTCTTGTTCATCATAGT 57.303 29.630 0.00 0.00 0.00 2.12
640 641 9.918630 AGACCAAAATTTTCTTGTTCATCATAG 57.081 29.630 0.00 0.00 0.00 2.23
643 644 9.748708 CTTAGACCAAAATTTTCTTGTTCATCA 57.251 29.630 0.00 0.00 0.00 3.07
644 645 9.196552 CCTTAGACCAAAATTTTCTTGTTCATC 57.803 33.333 0.00 0.00 0.00 2.92
645 646 8.704668 ACCTTAGACCAAAATTTTCTTGTTCAT 58.295 29.630 0.00 0.00 0.00 2.57
646 647 8.073467 ACCTTAGACCAAAATTTTCTTGTTCA 57.927 30.769 0.00 0.00 0.00 3.18
647 648 8.942338 AACCTTAGACCAAAATTTTCTTGTTC 57.058 30.769 0.00 0.00 0.00 3.18
649 650 9.416284 TCTAACCTTAGACCAAAATTTTCTTGT 57.584 29.630 0.00 0.00 34.99 3.16
650 651 9.899226 CTCTAACCTTAGACCAAAATTTTCTTG 57.101 33.333 0.00 0.00 34.99 3.02
651 652 9.642343 ACTCTAACCTTAGACCAAAATTTTCTT 57.358 29.630 0.00 0.00 34.99 2.52
652 653 9.067986 CACTCTAACCTTAGACCAAAATTTTCT 57.932 33.333 0.00 0.00 34.99 2.52
653 654 7.808381 GCACTCTAACCTTAGACCAAAATTTTC 59.192 37.037 0.00 0.00 34.99 2.29
654 655 7.286775 TGCACTCTAACCTTAGACCAAAATTTT 59.713 33.333 0.00 0.00 34.99 1.82
655 656 6.775629 TGCACTCTAACCTTAGACCAAAATTT 59.224 34.615 0.00 0.00 34.99 1.82
656 657 6.303839 TGCACTCTAACCTTAGACCAAAATT 58.696 36.000 0.00 0.00 34.99 1.82
657 658 5.876357 TGCACTCTAACCTTAGACCAAAAT 58.124 37.500 0.00 0.00 34.99 1.82
658 659 5.298989 TGCACTCTAACCTTAGACCAAAA 57.701 39.130 0.00 0.00 34.99 2.44
659 660 4.967084 TGCACTCTAACCTTAGACCAAA 57.033 40.909 0.00 0.00 34.99 3.28
660 661 5.245531 CAATGCACTCTAACCTTAGACCAA 58.754 41.667 0.00 0.00 34.99 3.67
661 662 4.832248 CAATGCACTCTAACCTTAGACCA 58.168 43.478 0.00 0.00 34.99 4.02
662 663 3.623510 GCAATGCACTCTAACCTTAGACC 59.376 47.826 0.00 0.00 34.99 3.85
663 664 4.253685 TGCAATGCACTCTAACCTTAGAC 58.746 43.478 2.72 0.00 33.11 2.59
664 665 4.551702 TGCAATGCACTCTAACCTTAGA 57.448 40.909 2.72 0.00 34.46 2.10
683 684 7.555639 TTTATACAAGTAAATTTGCACGTGC 57.444 32.000 33.11 33.11 42.50 5.34
694 695 9.991388 GACGTGGCATATTTTTATACAAGTAAA 57.009 29.630 0.00 0.00 0.00 2.01
695 696 9.386010 AGACGTGGCATATTTTTATACAAGTAA 57.614 29.630 0.00 0.00 0.00 2.24
696 697 8.951787 AGACGTGGCATATTTTTATACAAGTA 57.048 30.769 0.00 0.00 0.00 2.24
697 698 7.859325 AGACGTGGCATATTTTTATACAAGT 57.141 32.000 0.00 0.00 0.00 3.16
698 699 9.009327 CAAAGACGTGGCATATTTTTATACAAG 57.991 33.333 0.00 0.00 0.00 3.16
699 700 8.731605 TCAAAGACGTGGCATATTTTTATACAA 58.268 29.630 0.00 0.00 0.00 2.41
700 701 8.270080 TCAAAGACGTGGCATATTTTTATACA 57.730 30.769 0.00 0.00 0.00 2.29
701 702 9.169468 CATCAAAGACGTGGCATATTTTTATAC 57.831 33.333 0.00 0.00 0.00 1.47
702 703 8.898761 ACATCAAAGACGTGGCATATTTTTATA 58.101 29.630 0.00 0.00 0.00 0.98
703 704 7.771183 ACATCAAAGACGTGGCATATTTTTAT 58.229 30.769 0.00 0.00 0.00 1.40
704 705 7.151999 ACATCAAAGACGTGGCATATTTTTA 57.848 32.000 0.00 0.00 0.00 1.52
705 706 6.024552 ACATCAAAGACGTGGCATATTTTT 57.975 33.333 0.00 0.00 0.00 1.94
706 707 5.643379 ACATCAAAGACGTGGCATATTTT 57.357 34.783 0.00 0.00 0.00 1.82
707 708 5.880332 AGTACATCAAAGACGTGGCATATTT 59.120 36.000 0.00 0.00 0.00 1.40
708 709 5.428253 AGTACATCAAAGACGTGGCATATT 58.572 37.500 0.00 0.00 0.00 1.28
709 710 5.023533 AGTACATCAAAGACGTGGCATAT 57.976 39.130 0.00 0.00 0.00 1.78
710 711 4.159693 AGAGTACATCAAAGACGTGGCATA 59.840 41.667 0.00 0.00 0.00 3.14
711 712 3.055819 AGAGTACATCAAAGACGTGGCAT 60.056 43.478 0.00 0.00 0.00 4.40
712 713 2.299013 AGAGTACATCAAAGACGTGGCA 59.701 45.455 0.00 0.00 0.00 4.92
713 714 2.668457 CAGAGTACATCAAAGACGTGGC 59.332 50.000 0.00 0.00 0.00 5.01
714 715 3.056821 TCCAGAGTACATCAAAGACGTGG 60.057 47.826 0.00 0.00 0.00 4.94
715 716 4.174411 TCCAGAGTACATCAAAGACGTG 57.826 45.455 0.00 0.00 0.00 4.49
716 717 4.866508 TTCCAGAGTACATCAAAGACGT 57.133 40.909 0.00 0.00 0.00 4.34
717 718 6.539649 TTTTTCCAGAGTACATCAAAGACG 57.460 37.500 0.00 0.00 0.00 4.18
738 739 9.907229 TTTGGGTTTATTTTATGTCCACTTTTT 57.093 25.926 0.00 0.00 0.00 1.94
739 740 9.907229 TTTTGGGTTTATTTTATGTCCACTTTT 57.093 25.926 0.00 0.00 0.00 2.27
757 758 2.289382 CCCGCTTGCTTTATTTTGGGTT 60.289 45.455 0.00 0.00 0.00 4.11
825 843 0.039798 TTCCTTCGTCGTTGGAGTCG 60.040 55.000 8.45 0.00 0.00 4.18
832 850 1.352156 GCGATGCTTCCTTCGTCGTT 61.352 55.000 6.49 0.00 42.91 3.85
869 897 1.961277 CGTGGTTGGGTGAGCTCAC 60.961 63.158 34.25 34.25 45.72 3.51
870 898 2.425592 CGTGGTTGGGTGAGCTCA 59.574 61.111 13.74 13.74 0.00 4.26
871 899 2.358737 CCGTGGTTGGGTGAGCTC 60.359 66.667 6.82 6.82 0.00 4.09
874 902 4.619227 ACGCCGTGGTTGGGTGAG 62.619 66.667 0.00 0.00 38.43 3.51
875 903 4.920112 CACGCCGTGGTTGGGTGA 62.920 66.667 9.90 0.00 46.23 4.02
881 912 4.988598 CCTGCTCACGCCGTGGTT 62.989 66.667 18.32 0.00 33.87 3.67
885 916 4.681978 GGAACCTGCTCACGCCGT 62.682 66.667 0.00 0.00 34.43 5.68
888 919 1.282875 GTTTGGAACCTGCTCACGC 59.717 57.895 0.00 0.00 0.00 5.34
891 922 3.572255 GGTATTTGTTTGGAACCTGCTCA 59.428 43.478 0.00 0.00 0.00 4.26
892 923 3.056821 GGGTATTTGTTTGGAACCTGCTC 60.057 47.826 0.00 0.00 0.00 4.26
902 933 3.807071 GCACTTTGGTGGGTATTTGTTTG 59.193 43.478 0.00 0.00 43.18 2.93
913 944 3.726517 CCGCGAGCACTTTGGTGG 61.727 66.667 8.23 0.00 43.18 4.61
918 949 4.295119 ACGGACCGCGAGCACTTT 62.295 61.111 15.39 0.00 0.00 2.66
947 992 2.096406 CGCGGCGACAGAAATGTG 59.904 61.111 19.16 0.00 0.00 3.21
950 995 3.490759 CTGCGCGGCGACAGAAAT 61.491 61.111 29.60 0.00 34.71 2.17
977 1022 1.901948 ACTCACGCCCGTCTTCTGA 60.902 57.895 0.00 0.00 0.00 3.27
981 1026 2.651361 CTCACTCACGCCCGTCTT 59.349 61.111 0.00 0.00 0.00 3.01
986 1031 2.187946 CCATCCTCACTCACGCCC 59.812 66.667 0.00 0.00 0.00 6.13
1174 1510 2.165998 GCAGAGGAGCAATTTTGGAGT 58.834 47.619 0.00 0.00 0.00 3.85
1179 1515 1.897802 CCCAAGCAGAGGAGCAATTTT 59.102 47.619 0.00 0.00 36.85 1.82
1184 1520 1.834856 CTGACCCAAGCAGAGGAGCA 61.835 60.000 0.00 0.00 35.39 4.26
1185 1521 1.078567 CTGACCCAAGCAGAGGAGC 60.079 63.158 0.00 0.00 35.39 4.70
1199 1539 6.939551 TGCTGTTAGTTAATCGTTACTGAC 57.060 37.500 0.00 0.00 33.07 3.51
1201 1541 7.630987 CGAAATGCTGTTAGTTAATCGTTACTG 59.369 37.037 0.00 0.00 0.00 2.74
1203 1543 6.407181 GCGAAATGCTGTTAGTTAATCGTTAC 59.593 38.462 0.00 0.00 41.73 2.50
1209 1549 4.335594 GGAGGCGAAATGCTGTTAGTTAAT 59.664 41.667 0.00 0.00 45.43 1.40
1223 1563 2.289444 CCTACAAAGACAGGAGGCGAAA 60.289 50.000 0.00 0.00 33.42 3.46
1226 1566 0.608640 ACCTACAAAGACAGGAGGCG 59.391 55.000 0.00 0.00 35.76 5.52
1232 1572 4.527564 CGCTTCAAAACCTACAAAGACAG 58.472 43.478 0.00 0.00 0.00 3.51
1233 1573 3.242936 GCGCTTCAAAACCTACAAAGACA 60.243 43.478 0.00 0.00 0.00 3.41
1234 1574 3.297472 GCGCTTCAAAACCTACAAAGAC 58.703 45.455 0.00 0.00 0.00 3.01
1235 1575 2.292292 GGCGCTTCAAAACCTACAAAGA 59.708 45.455 7.64 0.00 0.00 2.52
1236 1576 2.034053 TGGCGCTTCAAAACCTACAAAG 59.966 45.455 7.64 0.00 0.00 2.77
1237 1577 2.025155 TGGCGCTTCAAAACCTACAAA 58.975 42.857 7.64 0.00 0.00 2.83
1241 1581 3.057596 CAGATTTGGCGCTTCAAAACCTA 60.058 43.478 14.41 0.00 39.64 3.08
1245 1585 2.030007 CCTCAGATTTGGCGCTTCAAAA 60.030 45.455 14.41 7.94 39.64 2.44
1257 1597 8.806146 AGTGCAAAAACATTATACCTCAGATTT 58.194 29.630 0.00 0.00 0.00 2.17
1272 1612 0.528017 TTCGTGGCAGTGCAAAAACA 59.472 45.000 18.61 1.71 0.00 2.83
1273 1613 1.851658 ATTCGTGGCAGTGCAAAAAC 58.148 45.000 18.61 8.31 0.00 2.43
1276 1616 1.406898 TCAAATTCGTGGCAGTGCAAA 59.593 42.857 18.61 5.71 0.00 3.68
1277 1617 1.028130 TCAAATTCGTGGCAGTGCAA 58.972 45.000 18.61 1.42 0.00 4.08
1278 1618 1.246649 ATCAAATTCGTGGCAGTGCA 58.753 45.000 18.61 0.00 0.00 4.57
1279 1619 2.352503 AATCAAATTCGTGGCAGTGC 57.647 45.000 6.55 6.55 0.00 4.40
1280 1620 3.119884 TGCTAATCAAATTCGTGGCAGTG 60.120 43.478 0.00 0.00 0.00 3.66
1281 1621 3.081061 TGCTAATCAAATTCGTGGCAGT 58.919 40.909 0.00 0.00 0.00 4.40
1282 1622 3.763097 TGCTAATCAAATTCGTGGCAG 57.237 42.857 0.00 0.00 0.00 4.85
1283 1623 5.122519 TCTATGCTAATCAAATTCGTGGCA 58.877 37.500 0.00 0.00 0.00 4.92
1284 1624 5.673337 TCTATGCTAATCAAATTCGTGGC 57.327 39.130 0.00 0.00 0.00 5.01
1285 1625 7.080099 CCAATCTATGCTAATCAAATTCGTGG 58.920 38.462 0.00 0.00 0.00 4.94
1286 1626 7.642669 ACCAATCTATGCTAATCAAATTCGTG 58.357 34.615 0.00 0.00 0.00 4.35
1287 1627 7.716998 AGACCAATCTATGCTAATCAAATTCGT 59.283 33.333 0.00 0.00 31.46 3.85
1288 1628 8.092521 AGACCAATCTATGCTAATCAAATTCG 57.907 34.615 0.00 0.00 31.46 3.34
1289 1629 9.282569 AGAGACCAATCTATGCTAATCAAATTC 57.717 33.333 0.00 0.00 34.34 2.17
1293 1633 9.770097 CTTTAGAGACCAATCTATGCTAATCAA 57.230 33.333 0.00 0.00 34.34 2.57
1294 1634 7.875041 GCTTTAGAGACCAATCTATGCTAATCA 59.125 37.037 0.00 0.00 34.34 2.57
1295 1635 7.333174 GGCTTTAGAGACCAATCTATGCTAATC 59.667 40.741 0.00 0.00 34.34 1.75
1296 1636 7.164803 GGCTTTAGAGACCAATCTATGCTAAT 58.835 38.462 0.00 0.00 34.34 1.73
1297 1637 6.525629 GGCTTTAGAGACCAATCTATGCTAA 58.474 40.000 0.00 0.00 34.34 3.09
1298 1638 6.102897 GGCTTTAGAGACCAATCTATGCTA 57.897 41.667 0.00 0.00 34.34 3.49
1299 1639 4.967036 GGCTTTAGAGACCAATCTATGCT 58.033 43.478 0.00 0.00 34.34 3.79
1310 1650 1.153349 CGCAGGGGGCTTTAGAGAC 60.153 63.158 0.00 0.00 41.67 3.36
1311 1651 3.031417 GCGCAGGGGGCTTTAGAGA 62.031 63.158 0.30 0.00 41.67 3.10
1312 1652 2.514824 GCGCAGGGGGCTTTAGAG 60.515 66.667 0.30 0.00 41.67 2.43
1324 1664 3.802008 GATGAATGCCGCAGCGCAG 62.802 63.158 11.47 1.31 43.26 5.18
1325 1665 3.879682 GATGAATGCCGCAGCGCA 61.880 61.111 11.47 11.93 44.31 6.09
1326 1666 3.879682 TGATGAATGCCGCAGCGC 61.880 61.111 10.07 0.00 44.31 5.92
1327 1667 2.023741 GTGATGAATGCCGCAGCG 59.976 61.111 8.18 8.18 44.31 5.18
1328 1668 0.946528 TATGTGATGAATGCCGCAGC 59.053 50.000 0.00 0.00 40.48 5.25
1329 1669 1.265095 GGTATGTGATGAATGCCGCAG 59.735 52.381 0.00 0.00 0.00 5.18
1330 1670 1.308047 GGTATGTGATGAATGCCGCA 58.692 50.000 0.00 0.00 0.00 5.69
1331 1671 0.593128 GGGTATGTGATGAATGCCGC 59.407 55.000 0.00 0.00 31.07 6.53
1332 1672 1.875514 CAGGGTATGTGATGAATGCCG 59.124 52.381 0.00 0.00 31.07 5.69
1333 1673 2.233271 CCAGGGTATGTGATGAATGCC 58.767 52.381 0.00 0.00 0.00 4.40
1334 1674 2.233271 CCCAGGGTATGTGATGAATGC 58.767 52.381 0.00 0.00 0.00 3.56
1335 1675 2.233271 GCCCAGGGTATGTGATGAATG 58.767 52.381 7.55 0.00 0.00 2.67
1336 1676 1.852309 TGCCCAGGGTATGTGATGAAT 59.148 47.619 7.55 0.00 0.00 2.57
1337 1677 1.294041 TGCCCAGGGTATGTGATGAA 58.706 50.000 7.55 0.00 0.00 2.57
1338 1678 1.294041 TTGCCCAGGGTATGTGATGA 58.706 50.000 7.55 0.00 0.00 2.92
1339 1679 2.142356 TTTGCCCAGGGTATGTGATG 57.858 50.000 7.55 0.00 0.00 3.07
1340 1680 3.721575 TCTATTTGCCCAGGGTATGTGAT 59.278 43.478 7.55 0.00 0.00 3.06
1341 1681 3.119319 TCTATTTGCCCAGGGTATGTGA 58.881 45.455 7.55 0.00 0.00 3.58
1342 1682 3.576078 TCTATTTGCCCAGGGTATGTG 57.424 47.619 7.55 0.00 0.00 3.21
1343 1683 4.416848 AGAATCTATTTGCCCAGGGTATGT 59.583 41.667 7.55 0.00 0.00 2.29
1344 1684 4.990526 AGAATCTATTTGCCCAGGGTATG 58.009 43.478 7.55 0.00 0.00 2.39
1345 1685 4.043435 GGAGAATCTATTTGCCCAGGGTAT 59.957 45.833 7.55 1.18 33.73 2.73
1349 1689 3.872459 AGGAGAATCTATTTGCCCAGG 57.128 47.619 0.00 0.00 33.73 4.45
1362 1710 5.574970 AAGAACACTGAGGAAAGGAGAAT 57.425 39.130 0.00 0.00 0.00 2.40
1363 1711 6.126883 TGTTAAGAACACTGAGGAAAGGAGAA 60.127 38.462 0.00 0.00 36.25 2.87
1365 1713 5.611374 TGTTAAGAACACTGAGGAAAGGAG 58.389 41.667 0.00 0.00 36.25 3.69
1385 1733 2.830651 TACCAACCCCAAACTGTGTT 57.169 45.000 0.00 0.00 0.00 3.32
1390 1738 4.282449 GCACTAAAATACCAACCCCAAACT 59.718 41.667 0.00 0.00 0.00 2.66
1391 1739 4.282449 AGCACTAAAATACCAACCCCAAAC 59.718 41.667 0.00 0.00 0.00 2.93
1416 2448 2.710096 ACCATATTCCGGTGGAACAG 57.290 50.000 15.35 0.00 45.07 3.16
1421 2453 3.065648 CGGTAAAAACCATATTCCGGTGG 59.934 47.826 7.26 7.26 41.35 4.61
1422 2454 3.487879 GCGGTAAAAACCATATTCCGGTG 60.488 47.826 0.00 0.00 36.67 4.94
1424 2456 2.033675 GGCGGTAAAAACCATATTCCGG 59.966 50.000 0.00 0.00 37.44 5.14
1425 2457 2.946990 AGGCGGTAAAAACCATATTCCG 59.053 45.455 0.00 0.00 39.52 4.30
1426 2458 4.994907 AAGGCGGTAAAAACCATATTCC 57.005 40.909 0.00 0.00 0.00 3.01
1433 2465 5.395682 AGGATAAAAAGGCGGTAAAAACC 57.604 39.130 0.00 0.00 0.00 3.27
1460 2500 5.883503 AAATTTTCGTAGCCCGTCATAAA 57.116 34.783 0.00 0.00 37.94 1.40
1485 2525 1.064758 TGGTGAGACTTGTTGGTTGCT 60.065 47.619 0.00 0.00 0.00 3.91
1494 2534 2.455674 TCCGTTCATGGTGAGACTTG 57.544 50.000 0.00 0.00 0.00 3.16
1495 2535 3.261897 AGAATCCGTTCATGGTGAGACTT 59.738 43.478 0.00 0.00 36.79 3.01
1498 2538 2.831526 TCAGAATCCGTTCATGGTGAGA 59.168 45.455 0.00 0.00 36.79 3.27
1499 2539 3.251479 TCAGAATCCGTTCATGGTGAG 57.749 47.619 0.00 0.00 36.79 3.51
1500 2540 3.912496 ATCAGAATCCGTTCATGGTGA 57.088 42.857 0.00 0.00 36.79 4.02
1501 2541 3.488047 GCAATCAGAATCCGTTCATGGTG 60.488 47.826 0.00 0.00 36.79 4.17
1502 2542 2.684881 GCAATCAGAATCCGTTCATGGT 59.315 45.455 0.00 0.00 36.79 3.55
1505 2545 3.287867 AGGCAATCAGAATCCGTTCAT 57.712 42.857 0.00 0.00 36.79 2.57
1558 2608 7.846101 TTATCAGCTATCTTCCTTCATGAGA 57.154 36.000 0.00 0.00 0.00 3.27
1595 2645 1.024579 GCACCACAACCAGGTATCCG 61.025 60.000 0.00 0.00 37.23 4.18
1792 4059 5.875359 CCCTTGGTTACTTAGTCTTTAGCTG 59.125 44.000 0.00 0.00 0.00 4.24
1799 4066 3.838903 CTCCACCCTTGGTTACTTAGTCT 59.161 47.826 0.00 0.00 44.35 3.24
1801 4068 3.865571 TCTCCACCCTTGGTTACTTAGT 58.134 45.455 0.00 0.00 44.35 2.24
1802 4069 4.903045 TTCTCCACCCTTGGTTACTTAG 57.097 45.455 0.00 0.00 44.35 2.18
1803 4070 5.311121 TCATTTCTCCACCCTTGGTTACTTA 59.689 40.000 0.00 0.00 44.35 2.24
1810 5470 3.370840 TCATCATTTCTCCACCCTTGG 57.629 47.619 0.00 0.00 45.56 3.61
1812 5472 6.381133 GGTTTTATCATCATTTCTCCACCCTT 59.619 38.462 0.00 0.00 0.00 3.95
1814 5474 5.656416 TGGTTTTATCATCATTTCTCCACCC 59.344 40.000 0.00 0.00 0.00 4.61
1817 5477 9.135189 CCTATTGGTTTTATCATCATTTCTCCA 57.865 33.333 0.00 0.00 0.00 3.86
1818 5478 9.136323 ACCTATTGGTTTTATCATCATTTCTCC 57.864 33.333 0.00 0.00 46.05 3.71
1836 5496 4.192317 GCTGTTAGACTTGGACCTATTGG 58.808 47.826 0.00 0.00 39.83 3.16
1843 5503 3.366374 GCCAAATGCTGTTAGACTTGGAC 60.366 47.826 2.89 0.00 36.26 4.02
1850 5510 2.205022 AGCTGCCAAATGCTGTTAGA 57.795 45.000 0.00 0.00 42.00 2.10
1857 5517 2.414138 GTCATTTCAAGCTGCCAAATGC 59.586 45.455 17.84 12.28 37.41 3.56
1902 5562 2.543777 TTGGAGAAACCGAACAGGAG 57.456 50.000 0.00 0.00 45.00 3.69
1923 5583 4.954875 AGACAAGAGAGTTGTTTCTCCAG 58.045 43.478 0.00 0.00 43.74 3.86
1930 5590 2.576615 GGCCAAGACAAGAGAGTTGTT 58.423 47.619 0.00 0.00 31.96 2.83
1931 5591 1.541233 CGGCCAAGACAAGAGAGTTGT 60.541 52.381 2.24 0.00 34.97 3.32
1932 5592 1.151668 CGGCCAAGACAAGAGAGTTG 58.848 55.000 2.24 0.00 0.00 3.16
1991 5687 1.144936 GTGAGGAGGCTCATTCCCG 59.855 63.158 17.69 0.00 35.20 5.14
2045 5742 6.550854 TGACAAAGAAGAATCAAAATGGGACT 59.449 34.615 0.00 0.00 0.00 3.85
2088 5808 7.589954 GCATAACGGACCAATTTATTCATGTAC 59.410 37.037 0.00 0.00 0.00 2.90
2091 5813 6.502652 TGCATAACGGACCAATTTATTCATG 58.497 36.000 0.00 0.00 0.00 3.07
2104 5826 2.706890 TCCTTTTCCTGCATAACGGAC 58.293 47.619 0.00 0.00 0.00 4.79
2108 5830 7.378181 TCTTCAAATTCCTTTTCCTGCATAAC 58.622 34.615 0.00 0.00 0.00 1.89
2153 5875 2.633481 ACGCTCCTTGTTCCTTTAGAGT 59.367 45.455 0.00 0.00 0.00 3.24
2305 6027 3.361414 CTTCGCTAACTCGGTAACTAGC 58.639 50.000 0.00 0.00 34.29 3.42
2356 6078 5.258051 TCAACACTAACAAAAGAAGGGTGT 58.742 37.500 0.00 0.00 37.93 4.16
2394 6116 5.578727 ACAACATTAGCGAGTCTCTGAAATC 59.421 40.000 0.00 0.00 0.00 2.17
2405 6127 8.015087 TGTTTCAAATAGAACAACATTAGCGAG 58.985 33.333 0.00 0.00 35.56 5.03
2406 6128 7.801315 GTGTTTCAAATAGAACAACATTAGCGA 59.199 33.333 0.00 0.00 35.56 4.93
2408 6130 9.463443 AAGTGTTTCAAATAGAACAACATTAGC 57.537 29.630 0.00 0.00 35.56 3.09
2452 6174 3.672397 CGTCTCTGACATATAGCACATGC 59.328 47.826 0.00 0.00 35.32 4.06
2628 7035 7.186128 GGTTTCAAATTTAACAGCTTGGTTTG 58.814 34.615 6.25 0.00 32.29 2.93
2858 7279 5.438761 AACAAGTTCATTTGGTCACTAGC 57.561 39.130 0.00 0.00 32.32 3.42
2860 7281 7.558444 ACCTAAAACAAGTTCATTTGGTCACTA 59.442 33.333 0.00 0.00 32.32 2.74
2861 7282 6.379988 ACCTAAAACAAGTTCATTTGGTCACT 59.620 34.615 0.00 0.00 32.32 3.41
2862 7283 6.569780 ACCTAAAACAAGTTCATTTGGTCAC 58.430 36.000 0.00 0.00 32.32 3.67
2863 7284 6.783708 ACCTAAAACAAGTTCATTTGGTCA 57.216 33.333 0.00 0.00 32.32 4.02
2864 7285 7.262048 TGAACCTAAAACAAGTTCATTTGGTC 58.738 34.615 0.90 0.00 43.60 4.02
3141 7651 6.934645 TCTTGTTTAAAAGGTCTCATCACGAT 59.065 34.615 0.00 0.00 0.00 3.73
3484 8016 4.407365 CCTCCCATTCTACCACTTTTGTT 58.593 43.478 0.00 0.00 0.00 2.83
3489 8021 2.661176 TCCCTCCCATTCTACCACTT 57.339 50.000 0.00 0.00 0.00 3.16
3638 8175 6.484643 CAGCAGCATAATAACATTAGGTCACT 59.515 38.462 0.00 0.00 0.00 3.41
3639 8176 6.483307 TCAGCAGCATAATAACATTAGGTCAC 59.517 38.462 0.00 0.00 0.00 3.67
3640 8177 6.483307 GTCAGCAGCATAATAACATTAGGTCA 59.517 38.462 0.00 0.00 0.00 4.02
3641 8178 6.073003 GGTCAGCAGCATAATAACATTAGGTC 60.073 42.308 0.00 0.00 0.00 3.85
3642 8179 5.765182 GGTCAGCAGCATAATAACATTAGGT 59.235 40.000 0.00 0.00 0.00 3.08
3643 8180 6.000219 AGGTCAGCAGCATAATAACATTAGG 59.000 40.000 0.00 0.00 0.00 2.69
3644 8181 7.875041 AGTAGGTCAGCAGCATAATAACATTAG 59.125 37.037 0.00 0.00 0.00 1.73
3645 8182 7.657354 CAGTAGGTCAGCAGCATAATAACATTA 59.343 37.037 0.00 0.00 0.00 1.90
3646 8183 6.484643 CAGTAGGTCAGCAGCATAATAACATT 59.515 38.462 0.00 0.00 0.00 2.71
3647 8184 5.994054 CAGTAGGTCAGCAGCATAATAACAT 59.006 40.000 0.00 0.00 0.00 2.71
3831 8368 4.713814 TGCAGGCCCAAATATTAATGTCAA 59.286 37.500 0.00 0.00 0.00 3.18
3839 8376 2.967887 GGAATCTGCAGGCCCAAATATT 59.032 45.455 15.13 3.12 0.00 1.28
3852 8389 4.067896 TCTTGACAAAGTGAGGAATCTGC 58.932 43.478 0.00 0.00 34.78 4.26
3860 8397 5.174395 CAGGGTAGATCTTGACAAAGTGAG 58.826 45.833 0.00 0.00 34.78 3.51
3956 8496 1.742880 CAGCTGGTCATGTCCACCG 60.743 63.158 7.66 0.89 36.61 4.94
4417 8963 3.849951 GCGATGGAAGGGAGCGGA 61.850 66.667 0.00 0.00 0.00 5.54
4609 9156 4.194720 GCGGATCTCGGCGTCAGT 62.195 66.667 6.85 0.00 39.69 3.41
4884 12009 4.810790 AGACGATTTGAAGAAGACGACAT 58.189 39.130 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.