Multiple sequence alignment - TraesCS1A01G246200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G246200 chr1A 100.000 4885 0 0 1 4885 436386441 436391325 0.000000e+00 9022.0
1 TraesCS1A01G246200 chr1A 91.434 502 35 5 2478 2976 405383136 405383632 0.000000e+00 682.0
2 TraesCS1A01G246200 chr1A 88.588 517 36 6 2478 2977 323090418 323089908 1.500000e-169 606.0
3 TraesCS1A01G246200 chr1A 87.333 450 45 7 2 450 292958887 292959325 5.640000e-139 505.0
4 TraesCS1A01G246200 chr1A 94.382 267 10 3 3212 3476 4651200 4650937 5.890000e-109 405.0
5 TraesCS1A01G246200 chr1A 88.525 61 3 3 440 500 3525978 3526034 2.440000e-08 71.3
6 TraesCS1A01G246200 chr3D 94.720 2216 62 9 473 2680 502144486 502142318 0.000000e+00 3393.0
7 TraesCS1A01G246200 chr3D 94.820 1139 48 6 947 2076 342128112 342126976 0.000000e+00 1766.0
8 TraesCS1A01G246200 chr3D 94.434 557 31 0 649 1205 65439936 65439380 0.000000e+00 857.0
9 TraesCS1A01G246200 chr3D 94.382 534 30 0 672 1205 535487313 535486780 0.000000e+00 821.0
10 TraesCS1A01G246200 chr3D 87.665 454 44 11 2 450 488229136 488229582 7.250000e-143 518.0
11 TraesCS1A01G246200 chr3D 87.333 450 47 10 4 450 488170357 488170799 1.570000e-139 507.0
12 TraesCS1A01G246200 chr3D 88.333 60 3 3 441 500 320641741 320641796 8.770000e-08 69.4
13 TraesCS1A01G246200 chr2D 94.746 2208 60 17 482 2680 332507053 332504893 0.000000e+00 3384.0
14 TraesCS1A01G246200 chr2D 95.331 257 9 1 3212 3468 212005850 212005597 5.890000e-109 405.0
15 TraesCS1A01G246200 chr2D 88.333 60 3 3 441 500 641747516 641747461 8.770000e-08 69.4
16 TraesCS1A01G246200 chr7D 94.540 2216 65 10 473 2680 414292377 414290210 0.000000e+00 3371.0
17 TraesCS1A01G246200 chr7D 88.170 448 43 8 2 443 255053580 255054023 4.330000e-145 525.0
18 TraesCS1A01G246200 chr7D 96.390 277 3 3 4401 4670 508597943 508598219 2.680000e-122 449.0
19 TraesCS1A01G246200 chr7D 95.683 278 4 4 4401 4670 46990916 46991193 1.610000e-119 440.0
20 TraesCS1A01G246200 chr7D 97.727 44 1 0 4842 4885 128082464 128082421 5.240000e-10 76.8
21 TraesCS1A01G246200 chr7D 88.333 60 3 3 441 500 64523208 64523263 8.770000e-08 69.4
22 TraesCS1A01G246200 chr5D 94.404 2216 67 11 473 2680 267803550 267805716 0.000000e+00 3352.0
23 TraesCS1A01G246200 chr5D 96.469 1756 51 6 2981 4730 528863311 528861561 0.000000e+00 2889.0
24 TraesCS1A01G246200 chr5D 96.765 1020 30 3 2981 3998 528858971 528857953 0.000000e+00 1698.0
25 TraesCS1A01G246200 chr5D 94.860 642 23 7 4213 4846 528855883 528855244 0.000000e+00 994.0
26 TraesCS1A01G246200 chr5D 94.107 560 33 0 646 1205 80205583 80206142 0.000000e+00 852.0
27 TraesCS1A01G246200 chr5D 95.391 499 17 5 4213 4707 528861569 528861073 0.000000e+00 789.0
28 TraesCS1A01G246200 chr5D 94.481 453 22 2 4030 4481 528857955 528857505 0.000000e+00 695.0
29 TraesCS1A01G246200 chr5D 86.293 321 37 5 1524 1841 521025379 521025063 4.680000e-90 342.0
30 TraesCS1A01G246200 chr5D 81.588 277 47 4 2094 2369 101258932 101258659 4.920000e-55 226.0
31 TraesCS1A01G246200 chr5D 96.078 51 1 1 426 475 327264620 327264670 1.130000e-11 82.4
32 TraesCS1A01G246200 chr6D 94.224 2216 73 9 473 2680 468637851 468640019 0.000000e+00 3332.0
33 TraesCS1A01G246200 chr6D 93.421 1140 53 10 947 2076 337747109 337745982 0.000000e+00 1670.0
34 TraesCS1A01G246200 chr6D 96.498 257 6 1 3212 3468 233685096 233684843 5.850000e-114 422.0
35 TraesCS1A01G246200 chr6D 95.000 260 10 1 3209 3468 42509409 42509665 5.890000e-109 405.0
36 TraesCS1A01G246200 chr6D 95.000 260 10 1 3209 3468 344162669 344162925 5.890000e-109 405.0
37 TraesCS1A01G246200 chr6D 86.253 371 46 4 3801 4170 471974253 471974619 9.850000e-107 398.0
38 TraesCS1A01G246200 chr6D 85.892 241 30 3 3801 4040 472034593 472034830 2.260000e-63 254.0
39 TraesCS1A01G246200 chr6D 87.709 179 16 5 473 651 468909073 468908901 2.310000e-48 204.0
40 TraesCS1A01G246200 chr1B 96.787 1245 36 1 1733 2977 620709901 620708661 0.000000e+00 2074.0
41 TraesCS1A01G246200 chr1B 90.503 179 13 4 473 651 630577602 630577776 2.940000e-57 233.0
42 TraesCS1A01G246200 chr1B 92.157 51 3 1 4836 4885 425021683 425021633 2.440000e-08 71.3
43 TraesCS1A01G246200 chr1B 86.364 66 4 4 436 500 411159400 411159339 3.160000e-07 67.6
44 TraesCS1A01G246200 chr7B 96.440 1236 40 1 1742 2977 32216663 32215432 0.000000e+00 2036.0
45 TraesCS1A01G246200 chr7B 93.868 897 54 1 639 1535 32217636 32216741 0.000000e+00 1351.0
46 TraesCS1A01G246200 chr7B 94.688 640 33 1 672 1311 14712850 14713488 0.000000e+00 992.0
47 TraesCS1A01G246200 chr6B 90.382 1414 94 22 3465 4843 174559679 174561085 0.000000e+00 1820.0
48 TraesCS1A01G246200 chr6B 100.000 42 0 0 4844 4885 665280353 665280394 1.460000e-10 78.7
49 TraesCS1A01G246200 chr6B 88.333 60 3 3 441 500 9212889 9212834 8.770000e-08 69.4
50 TraesCS1A01G246200 chr6B 88.333 60 4 2 441 500 523468430 523468374 8.770000e-08 69.4
51 TraesCS1A01G246200 chr5A 89.709 1409 104 20 3465 4839 498042065 498040664 0.000000e+00 1760.0
52 TraesCS1A01G246200 chr3B 92.362 1139 73 6 947 2076 314206137 314207270 0.000000e+00 1609.0
53 TraesCS1A01G246200 chr3B 88.915 424 38 5 2 424 473543540 473543955 9.380000e-142 514.0
54 TraesCS1A01G246200 chr3B 96.498 257 6 1 3212 3468 169685340 169685087 5.850000e-114 422.0
55 TraesCS1A01G246200 chr3B 100.000 41 0 0 4845 4885 444029493 444029533 5.240000e-10 76.8
56 TraesCS1A01G246200 chr2B 92.540 1126 78 5 3721 4844 31027307 31028428 0.000000e+00 1609.0
57 TraesCS1A01G246200 chr2B 88.268 179 21 0 473 651 88852796 88852974 1.060000e-51 215.0
58 TraesCS1A01G246200 chr6A 94.580 904 43 6 2075 2977 326794439 326793541 0.000000e+00 1393.0
59 TraesCS1A01G246200 chr6A 95.506 267 7 3 3212 3476 31891184 31890921 5.850000e-114 422.0
60 TraesCS1A01G246200 chr6A 87.640 178 18 4 473 650 58214876 58214703 2.310000e-48 204.0
61 TraesCS1A01G246200 chr1D 94.475 905 41 7 2075 2977 371676515 371677412 0.000000e+00 1386.0
62 TraesCS1A01G246200 chr1D 90.519 443 30 6 2 443 319912247 319911816 4.240000e-160 575.0
63 TraesCS1A01G246200 chr1D 89.294 439 37 6 5 443 319891626 319891198 4.300000e-150 542.0
64 TraesCS1A01G246200 chr1D 89.461 427 35 5 2 422 175538231 175537809 9.310000e-147 531.0
65 TraesCS1A01G246200 chr1D 97.101 276 2 2 4401 4670 170221311 170221036 1.240000e-125 460.0
66 TraesCS1A01G246200 chr1D 97.619 84 2 0 3997 4080 170221427 170221344 1.420000e-30 145.0
67 TraesCS1A01G246200 chr4B 88.746 1013 80 15 3465 4447 165826285 165827293 0.000000e+00 1208.0
68 TraesCS1A01G246200 chr4B 87.751 449 39 12 2 443 181401387 181401826 1.210000e-140 510.0
69 TraesCS1A01G246200 chr4B 97.674 43 1 0 4843 4885 526028615 526028657 1.890000e-09 75.0
70 TraesCS1A01G246200 chr4A 90.423 804 61 11 473 1263 156782277 156783077 0.000000e+00 1044.0
71 TraesCS1A01G246200 chr5B 94.531 640 34 1 672 1311 11529386 11528748 0.000000e+00 987.0
72 TraesCS1A01G246200 chr5B 94.062 640 37 1 672 1311 344640018 344639380 0.000000e+00 970.0
73 TraesCS1A01G246200 chr5B 100.000 41 0 0 4845 4885 209657680 209657720 5.240000e-10 76.8
74 TraesCS1A01G246200 chr5B 100.000 41 0 0 4845 4885 209666869 209666909 5.240000e-10 76.8
75 TraesCS1A01G246200 chrUn 95.105 143 2 2 2743 2885 31355097 31355234 2.290000e-53 220.0
76 TraesCS1A01G246200 chr4D 100.000 41 0 0 4845 4885 177459921 177459881 5.240000e-10 76.8
77 TraesCS1A01G246200 chr4D 97.674 43 1 0 4843 4885 480635974 480636016 1.890000e-09 75.0
78 TraesCS1A01G246200 chr7A 88.333 60 3 1 441 500 50551739 50551794 8.770000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G246200 chr1A 436386441 436391325 4884 False 9022.0 9022 100.0000 1 4885 1 chr1A.!!$F4 4884
1 TraesCS1A01G246200 chr1A 323089908 323090418 510 True 606.0 606 88.5880 2478 2977 1 chr1A.!!$R2 499
2 TraesCS1A01G246200 chr3D 502142318 502144486 2168 True 3393.0 3393 94.7200 473 2680 1 chr3D.!!$R3 2207
3 TraesCS1A01G246200 chr3D 342126976 342128112 1136 True 1766.0 1766 94.8200 947 2076 1 chr3D.!!$R2 1129
4 TraesCS1A01G246200 chr3D 65439380 65439936 556 True 857.0 857 94.4340 649 1205 1 chr3D.!!$R1 556
5 TraesCS1A01G246200 chr3D 535486780 535487313 533 True 821.0 821 94.3820 672 1205 1 chr3D.!!$R4 533
6 TraesCS1A01G246200 chr2D 332504893 332507053 2160 True 3384.0 3384 94.7460 482 2680 1 chr2D.!!$R2 2198
7 TraesCS1A01G246200 chr7D 414290210 414292377 2167 True 3371.0 3371 94.5400 473 2680 1 chr7D.!!$R2 2207
8 TraesCS1A01G246200 chr5D 267803550 267805716 2166 False 3352.0 3352 94.4040 473 2680 1 chr5D.!!$F2 2207
9 TraesCS1A01G246200 chr5D 528855244 528863311 8067 True 1413.0 2889 95.5932 2981 4846 5 chr5D.!!$R3 1865
10 TraesCS1A01G246200 chr5D 80205583 80206142 559 False 852.0 852 94.1070 646 1205 1 chr5D.!!$F1 559
11 TraesCS1A01G246200 chr6D 468637851 468640019 2168 False 3332.0 3332 94.2240 473 2680 1 chr6D.!!$F3 2207
12 TraesCS1A01G246200 chr6D 337745982 337747109 1127 True 1670.0 1670 93.4210 947 2076 1 chr6D.!!$R2 1129
13 TraesCS1A01G246200 chr1B 620708661 620709901 1240 True 2074.0 2074 96.7870 1733 2977 1 chr1B.!!$R3 1244
14 TraesCS1A01G246200 chr7B 32215432 32217636 2204 True 1693.5 2036 95.1540 639 2977 2 chr7B.!!$R1 2338
15 TraesCS1A01G246200 chr7B 14712850 14713488 638 False 992.0 992 94.6880 672 1311 1 chr7B.!!$F1 639
16 TraesCS1A01G246200 chr6B 174559679 174561085 1406 False 1820.0 1820 90.3820 3465 4843 1 chr6B.!!$F1 1378
17 TraesCS1A01G246200 chr5A 498040664 498042065 1401 True 1760.0 1760 89.7090 3465 4839 1 chr5A.!!$R1 1374
18 TraesCS1A01G246200 chr3B 314206137 314207270 1133 False 1609.0 1609 92.3620 947 2076 1 chr3B.!!$F1 1129
19 TraesCS1A01G246200 chr2B 31027307 31028428 1121 False 1609.0 1609 92.5400 3721 4844 1 chr2B.!!$F1 1123
20 TraesCS1A01G246200 chr6A 326793541 326794439 898 True 1393.0 1393 94.5800 2075 2977 1 chr6A.!!$R3 902
21 TraesCS1A01G246200 chr1D 371676515 371677412 897 False 1386.0 1386 94.4750 2075 2977 1 chr1D.!!$F1 902
22 TraesCS1A01G246200 chr4B 165826285 165827293 1008 False 1208.0 1208 88.7460 3465 4447 1 chr4B.!!$F1 982
23 TraesCS1A01G246200 chr4A 156782277 156783077 800 False 1044.0 1044 90.4230 473 1263 1 chr4A.!!$F1 790
24 TraesCS1A01G246200 chr5B 11528748 11529386 638 True 987.0 987 94.5310 672 1311 1 chr5B.!!$R1 639
25 TraesCS1A01G246200 chr5B 344639380 344640018 638 True 970.0 970 94.0620 672 1311 1 chr5B.!!$R2 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
449 450 0.031010 AAGGGGGCCGAATCTCTACT 60.031 55.0 0.00 0.0 0.0 2.57 F
1006 1047 0.249615 ACGATGGCAGACGATGGATG 60.250 55.0 20.22 0.0 0.0 3.51 F
1158 1201 0.851332 CCCCTTCCTCTTTCCCCCTT 60.851 60.0 0.00 0.0 0.0 3.95 F
3054 3148 0.179067 TCTGCGAGTTTTCCGGTGTT 60.179 50.0 0.00 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1308 1352 1.472878 ACGAACTTGCATCGCTAGAGA 59.527 47.619 8.06 0.0 43.88 3.10 R
2994 3088 1.374758 GTGAGCCTTGTCCCTGACG 60.375 63.158 0.00 0.0 34.95 4.35 R
3106 3200 5.050023 CAGCAATGAACATGCAACAATTTCA 60.050 36.000 0.00 0.0 46.22 2.69 R
4859 11193 0.399376 TCCTTTAGGATAGGGCCGCA 60.399 55.000 0.00 0.0 39.78 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.659480 GTGTCCACGGTTTCGCTA 57.341 55.556 0.00 0.00 40.63 4.26
18 19 3.132863 GTGTCCACGGTTTCGCTAT 57.867 52.632 0.00 0.00 40.63 2.97
19 20 0.997196 GTGTCCACGGTTTCGCTATC 59.003 55.000 0.00 0.00 40.63 2.08
20 21 0.457166 TGTCCACGGTTTCGCTATCG 60.457 55.000 0.00 0.00 40.63 2.92
21 22 1.140161 TCCACGGTTTCGCTATCGG 59.860 57.895 0.00 0.00 40.63 4.18
22 23 1.153706 CCACGGTTTCGCTATCGGT 60.154 57.895 0.00 0.00 40.63 4.69
23 24 1.143969 CCACGGTTTCGCTATCGGTC 61.144 60.000 0.00 0.00 40.63 4.79
24 25 0.457166 CACGGTTTCGCTATCGGTCA 60.457 55.000 0.00 0.00 40.63 4.02
25 26 0.458669 ACGGTTTCGCTATCGGTCAT 59.541 50.000 0.00 0.00 40.63 3.06
26 27 1.134907 ACGGTTTCGCTATCGGTCATT 60.135 47.619 0.00 0.00 40.63 2.57
27 28 1.257936 CGGTTTCGCTATCGGTCATTG 59.742 52.381 0.00 0.00 36.13 2.82
28 29 2.546778 GGTTTCGCTATCGGTCATTGA 58.453 47.619 0.00 0.00 36.13 2.57
29 30 2.933906 GGTTTCGCTATCGGTCATTGAA 59.066 45.455 0.00 0.00 36.13 2.69
30 31 3.242316 GGTTTCGCTATCGGTCATTGAAC 60.242 47.826 0.00 0.00 36.13 3.18
31 32 1.835121 TCGCTATCGGTCATTGAACG 58.165 50.000 17.88 17.88 44.86 3.95
37 38 2.466867 CGGTCATTGAACGAAGGGG 58.533 57.895 19.13 0.00 46.60 4.79
38 39 0.321298 CGGTCATTGAACGAAGGGGT 60.321 55.000 19.13 0.00 46.60 4.95
39 40 1.880646 CGGTCATTGAACGAAGGGGTT 60.881 52.381 19.13 0.00 46.60 4.11
40 41 2.235891 GGTCATTGAACGAAGGGGTTT 58.764 47.619 0.00 0.00 0.00 3.27
41 42 2.228103 GGTCATTGAACGAAGGGGTTTC 59.772 50.000 0.00 0.00 0.00 2.78
51 52 3.336138 GAAGGGGTTTCGTTCATCTCT 57.664 47.619 0.00 0.00 39.36 3.10
52 53 4.467198 GAAGGGGTTTCGTTCATCTCTA 57.533 45.455 0.00 0.00 39.36 2.43
53 54 5.024785 GAAGGGGTTTCGTTCATCTCTAT 57.975 43.478 0.00 0.00 39.36 1.98
54 55 4.408182 AGGGGTTTCGTTCATCTCTATG 57.592 45.455 0.00 0.00 0.00 2.23
55 56 4.030913 AGGGGTTTCGTTCATCTCTATGA 58.969 43.478 0.00 0.00 40.43 2.15
56 57 4.656112 AGGGGTTTCGTTCATCTCTATGAT 59.344 41.667 0.00 0.00 41.73 2.45
57 58 5.131142 AGGGGTTTCGTTCATCTCTATGATT 59.869 40.000 0.00 0.00 41.73 2.57
58 59 5.823045 GGGGTTTCGTTCATCTCTATGATTT 59.177 40.000 0.00 0.00 41.73 2.17
59 60 6.990349 GGGGTTTCGTTCATCTCTATGATTTA 59.010 38.462 0.00 0.00 41.73 1.40
60 61 7.041984 GGGGTTTCGTTCATCTCTATGATTTAC 60.042 40.741 0.00 0.00 41.73 2.01
61 62 7.041984 GGGTTTCGTTCATCTCTATGATTTACC 60.042 40.741 0.00 0.00 41.73 2.85
62 63 7.306632 GGTTTCGTTCATCTCTATGATTTACCG 60.307 40.741 0.00 0.00 41.73 4.02
63 64 6.628919 TCGTTCATCTCTATGATTTACCGA 57.371 37.500 0.00 0.00 41.73 4.69
64 65 7.034685 TCGTTCATCTCTATGATTTACCGAA 57.965 36.000 0.00 0.00 41.73 4.30
65 66 6.916387 TCGTTCATCTCTATGATTTACCGAAC 59.084 38.462 0.00 0.00 41.73 3.95
66 67 6.144080 CGTTCATCTCTATGATTTACCGAACC 59.856 42.308 0.00 0.00 41.73 3.62
67 68 6.978674 TCATCTCTATGATTTACCGAACCT 57.021 37.500 0.00 0.00 37.20 3.50
68 69 6.982852 TCATCTCTATGATTTACCGAACCTC 58.017 40.000 0.00 0.00 37.20 3.85
69 70 5.786264 TCTCTATGATTTACCGAACCTCC 57.214 43.478 0.00 0.00 0.00 4.30
70 71 4.277672 TCTCTATGATTTACCGAACCTCCG 59.722 45.833 0.00 0.00 0.00 4.63
71 72 7.968875 ATCTCTATGATTTACCGAACCTCCGG 61.969 46.154 0.00 0.00 43.12 5.14
78 79 3.362262 CGAACCTCCGGAGTCACA 58.638 61.111 29.25 0.00 0.00 3.58
79 80 1.663739 CGAACCTCCGGAGTCACAA 59.336 57.895 29.25 0.00 0.00 3.33
80 81 0.388649 CGAACCTCCGGAGTCACAAG 60.389 60.000 29.25 15.46 0.00 3.16
81 82 0.670854 GAACCTCCGGAGTCACAAGC 60.671 60.000 29.25 8.15 0.00 4.01
82 83 1.122019 AACCTCCGGAGTCACAAGCT 61.122 55.000 29.25 1.86 0.00 3.74
83 84 1.122019 ACCTCCGGAGTCACAAGCTT 61.122 55.000 29.25 0.00 0.00 3.74
84 85 0.895530 CCTCCGGAGTCACAAGCTTA 59.104 55.000 29.25 0.00 0.00 3.09
85 86 1.275291 CCTCCGGAGTCACAAGCTTAA 59.725 52.381 29.25 0.00 0.00 1.85
86 87 2.611518 CTCCGGAGTCACAAGCTTAAG 58.388 52.381 24.04 0.00 0.00 1.85
87 88 1.275291 TCCGGAGTCACAAGCTTAAGG 59.725 52.381 0.00 0.00 0.00 2.69
88 89 1.002087 CCGGAGTCACAAGCTTAAGGT 59.998 52.381 0.00 0.12 0.00 3.50
89 90 2.232941 CCGGAGTCACAAGCTTAAGGTA 59.767 50.000 7.76 0.00 0.00 3.08
90 91 3.306502 CCGGAGTCACAAGCTTAAGGTAA 60.307 47.826 7.76 0.00 0.00 2.85
91 92 4.504858 CGGAGTCACAAGCTTAAGGTAAT 58.495 43.478 7.76 0.00 0.00 1.89
92 93 4.567159 CGGAGTCACAAGCTTAAGGTAATC 59.433 45.833 7.76 0.94 0.00 1.75
93 94 5.488341 GGAGTCACAAGCTTAAGGTAATCA 58.512 41.667 7.76 0.00 0.00 2.57
94 95 6.116126 GGAGTCACAAGCTTAAGGTAATCAT 58.884 40.000 7.76 0.00 0.00 2.45
95 96 6.037610 GGAGTCACAAGCTTAAGGTAATCATG 59.962 42.308 7.76 4.73 0.00 3.07
96 97 6.711277 AGTCACAAGCTTAAGGTAATCATGA 58.289 36.000 7.76 0.00 0.00 3.07
97 98 7.341805 AGTCACAAGCTTAAGGTAATCATGAT 58.658 34.615 7.76 1.18 0.00 2.45
98 99 8.486210 AGTCACAAGCTTAAGGTAATCATGATA 58.514 33.333 9.04 0.00 0.00 2.15
99 100 9.277783 GTCACAAGCTTAAGGTAATCATGATAT 57.722 33.333 9.04 2.30 0.00 1.63
100 101 9.276590 TCACAAGCTTAAGGTAATCATGATATG 57.723 33.333 9.04 1.08 0.00 1.78
101 102 8.019669 CACAAGCTTAAGGTAATCATGATATGC 58.980 37.037 9.04 6.18 0.00 3.14
102 103 7.941238 ACAAGCTTAAGGTAATCATGATATGCT 59.059 33.333 9.04 8.35 0.00 3.79
103 104 7.918536 AGCTTAAGGTAATCATGATATGCTG 57.081 36.000 9.04 0.00 0.00 4.41
104 105 7.683578 AGCTTAAGGTAATCATGATATGCTGA 58.316 34.615 9.04 0.00 0.00 4.26
105 106 7.823310 AGCTTAAGGTAATCATGATATGCTGAG 59.177 37.037 9.04 3.89 0.00 3.35
106 107 7.605691 GCTTAAGGTAATCATGATATGCTGAGT 59.394 37.037 9.04 0.00 0.00 3.41
107 108 8.837788 TTAAGGTAATCATGATATGCTGAGTG 57.162 34.615 9.04 0.00 0.00 3.51
108 109 6.430962 AGGTAATCATGATATGCTGAGTGT 57.569 37.500 9.04 0.00 0.00 3.55
109 110 6.835174 AGGTAATCATGATATGCTGAGTGTT 58.165 36.000 9.04 0.00 0.00 3.32
110 111 7.966812 AGGTAATCATGATATGCTGAGTGTTA 58.033 34.615 9.04 0.00 0.00 2.41
111 112 8.093307 AGGTAATCATGATATGCTGAGTGTTAG 58.907 37.037 9.04 0.00 0.00 2.34
112 113 7.875041 GGTAATCATGATATGCTGAGTGTTAGT 59.125 37.037 9.04 0.00 0.00 2.24
113 114 9.914131 GTAATCATGATATGCTGAGTGTTAGTA 57.086 33.333 9.04 0.00 0.00 1.82
115 116 6.986250 TCATGATATGCTGAGTGTTAGTAGG 58.014 40.000 0.00 0.00 0.00 3.18
116 117 6.777580 TCATGATATGCTGAGTGTTAGTAGGA 59.222 38.462 0.00 0.00 0.00 2.94
117 118 6.392625 TGATATGCTGAGTGTTAGTAGGAC 57.607 41.667 0.00 0.00 0.00 3.85
118 119 5.891551 TGATATGCTGAGTGTTAGTAGGACA 59.108 40.000 0.00 0.00 0.00 4.02
119 120 4.727507 ATGCTGAGTGTTAGTAGGACAG 57.272 45.455 0.00 0.00 0.00 3.51
120 121 2.826128 TGCTGAGTGTTAGTAGGACAGG 59.174 50.000 0.00 0.00 0.00 4.00
121 122 3.090037 GCTGAGTGTTAGTAGGACAGGA 58.910 50.000 0.00 0.00 0.00 3.86
122 123 3.129638 GCTGAGTGTTAGTAGGACAGGAG 59.870 52.174 0.00 0.00 0.00 3.69
123 124 4.337145 CTGAGTGTTAGTAGGACAGGAGT 58.663 47.826 0.00 0.00 0.00 3.85
124 125 4.079970 TGAGTGTTAGTAGGACAGGAGTG 58.920 47.826 0.00 0.00 0.00 3.51
125 126 4.202535 TGAGTGTTAGTAGGACAGGAGTGA 60.203 45.833 0.00 0.00 0.00 3.41
126 127 4.936802 AGTGTTAGTAGGACAGGAGTGAT 58.063 43.478 0.00 0.00 0.00 3.06
127 128 4.707448 AGTGTTAGTAGGACAGGAGTGATG 59.293 45.833 0.00 0.00 0.00 3.07
128 129 4.705507 GTGTTAGTAGGACAGGAGTGATGA 59.294 45.833 0.00 0.00 0.00 2.92
129 130 4.950475 TGTTAGTAGGACAGGAGTGATGAG 59.050 45.833 0.00 0.00 0.00 2.90
130 131 5.194432 GTTAGTAGGACAGGAGTGATGAGA 58.806 45.833 0.00 0.00 0.00 3.27
131 132 4.323569 AGTAGGACAGGAGTGATGAGAA 57.676 45.455 0.00 0.00 0.00 2.87
132 133 4.877773 AGTAGGACAGGAGTGATGAGAAT 58.122 43.478 0.00 0.00 0.00 2.40
133 134 6.019656 AGTAGGACAGGAGTGATGAGAATA 57.980 41.667 0.00 0.00 0.00 1.75
134 135 6.619464 AGTAGGACAGGAGTGATGAGAATAT 58.381 40.000 0.00 0.00 0.00 1.28
135 136 7.760607 AGTAGGACAGGAGTGATGAGAATATA 58.239 38.462 0.00 0.00 0.00 0.86
136 137 8.397957 AGTAGGACAGGAGTGATGAGAATATAT 58.602 37.037 0.00 0.00 0.00 0.86
137 138 9.030452 GTAGGACAGGAGTGATGAGAATATATT 57.970 37.037 0.00 0.00 0.00 1.28
138 139 8.503428 AGGACAGGAGTGATGAGAATATATTT 57.497 34.615 0.00 0.00 0.00 1.40
139 140 8.373981 AGGACAGGAGTGATGAGAATATATTTG 58.626 37.037 0.00 0.00 0.00 2.32
140 141 8.153550 GGACAGGAGTGATGAGAATATATTTGT 58.846 37.037 0.00 0.00 0.00 2.83
141 142 8.899427 ACAGGAGTGATGAGAATATATTTGTG 57.101 34.615 0.00 0.00 0.00 3.33
142 143 7.935755 ACAGGAGTGATGAGAATATATTTGTGG 59.064 37.037 0.00 0.00 0.00 4.17
143 144 8.152898 CAGGAGTGATGAGAATATATTTGTGGA 58.847 37.037 0.00 0.00 0.00 4.02
144 145 8.717717 AGGAGTGATGAGAATATATTTGTGGAA 58.282 33.333 0.00 0.00 0.00 3.53
145 146 8.778358 GGAGTGATGAGAATATATTTGTGGAAC 58.222 37.037 0.00 0.00 37.35 3.62
146 147 9.553064 GAGTGATGAGAATATATTTGTGGAACT 57.447 33.333 0.00 1.21 38.04 3.01
147 148 9.334947 AGTGATGAGAATATATTTGTGGAACTG 57.665 33.333 0.00 0.00 38.04 3.16
148 149 9.113838 GTGATGAGAATATATTTGTGGAACTGT 57.886 33.333 0.00 0.00 38.04 3.55
149 150 9.685276 TGATGAGAATATATTTGTGGAACTGTT 57.315 29.630 0.00 0.00 38.04 3.16
152 153 9.513906 TGAGAATATATTTGTGGAACTGTTTCA 57.486 29.630 0.00 0.00 38.04 2.69
161 162 6.757897 TGTGGAACTGTTTCATTGATATCC 57.242 37.500 4.56 0.00 38.04 2.59
162 163 5.353956 TGTGGAACTGTTTCATTGATATCCG 59.646 40.000 4.56 0.00 38.04 4.18
163 164 4.881273 TGGAACTGTTTCATTGATATCCGG 59.119 41.667 0.00 0.00 32.80 5.14
164 165 5.123227 GGAACTGTTTCATTGATATCCGGA 58.877 41.667 6.61 6.61 32.80 5.14
165 166 5.588648 GGAACTGTTTCATTGATATCCGGAA 59.411 40.000 9.01 0.00 32.80 4.30
166 167 6.263168 GGAACTGTTTCATTGATATCCGGAAT 59.737 38.462 9.01 3.16 32.80 3.01
167 168 7.444183 GGAACTGTTTCATTGATATCCGGAATA 59.556 37.037 9.01 1.72 32.80 1.75
168 169 7.730364 ACTGTTTCATTGATATCCGGAATAC 57.270 36.000 9.01 2.92 0.00 1.89
169 170 7.509546 ACTGTTTCATTGATATCCGGAATACT 58.490 34.615 9.01 0.00 0.00 2.12
170 171 7.993183 ACTGTTTCATTGATATCCGGAATACTT 59.007 33.333 9.01 0.00 0.00 2.24
171 172 8.378172 TGTTTCATTGATATCCGGAATACTTC 57.622 34.615 9.01 1.71 0.00 3.01
172 173 7.444183 TGTTTCATTGATATCCGGAATACTTCC 59.556 37.037 9.01 0.00 46.62 3.46
190 191 3.498676 CGAGAGGTTCTGAAAGCGT 57.501 52.632 0.00 0.00 37.95 5.07
191 192 1.784525 CGAGAGGTTCTGAAAGCGTT 58.215 50.000 0.00 0.00 37.95 4.84
192 193 2.135933 CGAGAGGTTCTGAAAGCGTTT 58.864 47.619 0.00 0.00 37.95 3.60
193 194 2.155924 CGAGAGGTTCTGAAAGCGTTTC 59.844 50.000 0.00 4.24 37.95 2.78
194 195 2.135933 AGAGGTTCTGAAAGCGTTTCG 58.864 47.619 0.00 0.00 42.55 3.46
195 196 1.194772 GAGGTTCTGAAAGCGTTTCGG 59.805 52.381 11.00 11.00 45.35 4.30
196 197 0.237498 GGTTCTGAAAGCGTTTCGGG 59.763 55.000 14.95 7.61 44.36 5.14
197 198 0.237498 GTTCTGAAAGCGTTTCGGGG 59.763 55.000 14.95 5.92 44.36 5.73
198 199 0.179040 TTCTGAAAGCGTTTCGGGGT 60.179 50.000 14.95 0.00 44.36 4.95
199 200 0.601841 TCTGAAAGCGTTTCGGGGTC 60.602 55.000 14.95 0.00 44.36 4.46
200 201 0.882927 CTGAAAGCGTTTCGGGGTCA 60.883 55.000 9.92 0.00 42.55 4.02
201 202 1.161563 TGAAAGCGTTTCGGGGTCAC 61.162 55.000 6.16 0.00 42.55 3.67
202 203 1.848932 GAAAGCGTTTCGGGGTCACC 61.849 60.000 0.00 0.00 0.00 4.02
219 220 4.371975 CGGAAGGCTTTCGGTGAA 57.628 55.556 20.24 0.00 33.98 3.18
220 221 2.854522 CGGAAGGCTTTCGGTGAAT 58.145 52.632 20.24 0.00 33.98 2.57
221 222 2.018542 CGGAAGGCTTTCGGTGAATA 57.981 50.000 20.24 0.00 33.98 1.75
222 223 2.561569 CGGAAGGCTTTCGGTGAATAT 58.438 47.619 20.24 0.00 33.98 1.28
223 224 2.544267 CGGAAGGCTTTCGGTGAATATC 59.456 50.000 20.24 0.00 33.98 1.63
224 225 2.544267 GGAAGGCTTTCGGTGAATATCG 59.456 50.000 0.00 0.00 33.98 2.92
225 226 2.981859 AGGCTTTCGGTGAATATCGT 57.018 45.000 0.00 0.00 0.00 3.73
226 227 2.550978 AGGCTTTCGGTGAATATCGTG 58.449 47.619 0.00 0.00 0.00 4.35
227 228 2.093658 AGGCTTTCGGTGAATATCGTGT 60.094 45.455 0.00 0.00 0.00 4.49
228 229 3.131577 AGGCTTTCGGTGAATATCGTGTA 59.868 43.478 0.00 0.00 0.00 2.90
229 230 3.244579 GGCTTTCGGTGAATATCGTGTAC 59.755 47.826 0.00 0.00 0.00 2.90
230 231 4.110482 GCTTTCGGTGAATATCGTGTACT 58.890 43.478 0.00 0.00 0.00 2.73
231 232 5.276270 GCTTTCGGTGAATATCGTGTACTA 58.724 41.667 0.00 0.00 0.00 1.82
232 233 5.172771 GCTTTCGGTGAATATCGTGTACTAC 59.827 44.000 0.00 0.00 0.00 2.73
233 234 6.441093 TTTCGGTGAATATCGTGTACTACT 57.559 37.500 0.00 0.00 0.00 2.57
234 235 5.413969 TCGGTGAATATCGTGTACTACTG 57.586 43.478 0.00 0.00 0.00 2.74
235 236 4.274214 TCGGTGAATATCGTGTACTACTGG 59.726 45.833 0.00 0.00 0.00 4.00
236 237 4.556104 CGGTGAATATCGTGTACTACTGGG 60.556 50.000 0.00 0.00 0.00 4.45
237 238 4.340381 GGTGAATATCGTGTACTACTGGGT 59.660 45.833 0.00 0.00 0.00 4.51
238 239 5.532406 GGTGAATATCGTGTACTACTGGGTA 59.468 44.000 0.00 0.00 0.00 3.69
239 240 6.208204 GGTGAATATCGTGTACTACTGGGTAT 59.792 42.308 0.00 0.00 0.00 2.73
240 241 7.255730 GGTGAATATCGTGTACTACTGGGTATT 60.256 40.741 0.00 0.00 0.00 1.89
241 242 8.786898 GTGAATATCGTGTACTACTGGGTATTA 58.213 37.037 0.00 0.00 0.00 0.98
242 243 8.786898 TGAATATCGTGTACTACTGGGTATTAC 58.213 37.037 0.00 0.00 0.00 1.89
243 244 7.693969 ATATCGTGTACTACTGGGTATTACC 57.306 40.000 4.11 4.11 37.60 2.85
244 245 3.876914 TCGTGTACTACTGGGTATTACCG 59.123 47.826 6.77 0.00 39.83 4.02
245 246 3.876914 CGTGTACTACTGGGTATTACCGA 59.123 47.826 6.77 2.07 39.83 4.69
246 247 4.516698 CGTGTACTACTGGGTATTACCGAT 59.483 45.833 6.77 0.00 39.83 4.18
247 248 5.009010 CGTGTACTACTGGGTATTACCGATT 59.991 44.000 6.77 0.21 39.83 3.34
248 249 6.204688 CGTGTACTACTGGGTATTACCGATTA 59.795 42.308 6.77 1.38 39.83 1.75
249 250 7.094634 CGTGTACTACTGGGTATTACCGATTAT 60.095 40.741 6.77 0.00 39.83 1.28
250 251 8.579863 GTGTACTACTGGGTATTACCGATTATT 58.420 37.037 6.77 0.00 39.83 1.40
251 252 9.146586 TGTACTACTGGGTATTACCGATTATTT 57.853 33.333 6.77 0.00 39.83 1.40
252 253 9.987272 GTACTACTGGGTATTACCGATTATTTT 57.013 33.333 6.77 0.00 39.83 1.82
276 277 9.463902 TTTTATATAGGTGGAAAATGTTTCCGA 57.536 29.630 13.61 2.58 41.43 4.55
277 278 8.671384 TTATATAGGTGGAAAATGTTTCCGAG 57.329 34.615 13.61 0.00 41.43 4.63
278 279 2.514803 AGGTGGAAAATGTTTCCGAGG 58.485 47.619 13.61 0.00 41.43 4.63
279 280 2.107552 AGGTGGAAAATGTTTCCGAGGA 59.892 45.455 13.61 0.00 41.43 3.71
280 281 3.089284 GGTGGAAAATGTTTCCGAGGAT 58.911 45.455 13.61 0.00 41.43 3.24
281 282 3.119495 GGTGGAAAATGTTTCCGAGGATG 60.119 47.826 13.61 0.00 41.43 3.51
282 283 3.506067 GTGGAAAATGTTTCCGAGGATGT 59.494 43.478 13.61 0.00 41.43 3.06
283 284 4.022329 GTGGAAAATGTTTCCGAGGATGTT 60.022 41.667 13.61 0.00 41.43 2.71
284 285 5.182380 GTGGAAAATGTTTCCGAGGATGTTA 59.818 40.000 13.61 0.00 41.43 2.41
285 286 5.770663 TGGAAAATGTTTCCGAGGATGTTAA 59.229 36.000 13.61 0.00 41.43 2.01
286 287 6.265649 TGGAAAATGTTTCCGAGGATGTTAAA 59.734 34.615 13.61 0.00 41.43 1.52
287 288 7.039363 TGGAAAATGTTTCCGAGGATGTTAAAT 60.039 33.333 13.61 0.00 41.43 1.40
288 289 7.817478 GGAAAATGTTTCCGAGGATGTTAAATT 59.183 33.333 4.09 0.00 0.00 1.82
289 290 9.849166 GAAAATGTTTCCGAGGATGTTAAATTA 57.151 29.630 0.00 0.00 0.00 1.40
397 398 1.768275 AGGAAACTTGGGCCAAAAAGG 59.232 47.619 21.28 11.05 37.44 3.11
416 417 4.929807 CCAAGTGGGAAAGTGCCT 57.070 55.556 0.00 0.00 40.01 4.75
417 418 2.646121 CCAAGTGGGAAAGTGCCTC 58.354 57.895 0.00 0.00 40.01 4.70
418 419 0.895559 CCAAGTGGGAAAGTGCCTCC 60.896 60.000 0.00 0.00 40.01 4.30
423 424 4.745116 GGAAAGTGCCTCCCTTCC 57.255 61.111 0.00 0.00 0.00 3.46
424 425 1.000771 GGAAAGTGCCTCCCTTCCC 60.001 63.158 0.00 0.00 0.00 3.97
425 426 1.377333 GAAAGTGCCTCCCTTCCCG 60.377 63.158 0.00 0.00 0.00 5.14
426 427 1.838073 GAAAGTGCCTCCCTTCCCGA 61.838 60.000 0.00 0.00 0.00 5.14
427 428 1.423794 AAAGTGCCTCCCTTCCCGAA 61.424 55.000 0.00 0.00 0.00 4.30
428 429 1.842381 AAGTGCCTCCCTTCCCGAAG 61.842 60.000 0.00 0.00 38.14 3.79
441 442 3.712907 CGAAGGAAGGGGGCCGAA 61.713 66.667 0.00 0.00 0.00 4.30
442 443 3.007542 GAAGGAAGGGGGCCGAAT 58.992 61.111 0.00 0.00 0.00 3.34
443 444 1.152943 GAAGGAAGGGGGCCGAATC 60.153 63.158 0.00 0.00 0.00 2.52
444 445 1.619669 AAGGAAGGGGGCCGAATCT 60.620 57.895 0.00 0.00 0.00 2.40
445 446 1.636769 AAGGAAGGGGGCCGAATCTC 61.637 60.000 0.00 0.00 0.00 2.75
446 447 2.073101 GGAAGGGGGCCGAATCTCT 61.073 63.158 0.00 0.00 0.00 3.10
447 448 0.763223 GGAAGGGGGCCGAATCTCTA 60.763 60.000 0.00 0.00 0.00 2.43
448 449 0.393448 GAAGGGGGCCGAATCTCTAC 59.607 60.000 0.00 0.00 0.00 2.59
449 450 0.031010 AAGGGGGCCGAATCTCTACT 60.031 55.000 0.00 0.00 0.00 2.57
450 451 0.470268 AGGGGGCCGAATCTCTACTC 60.470 60.000 0.00 0.00 0.00 2.59
451 452 1.473497 GGGGGCCGAATCTCTACTCC 61.473 65.000 0.00 0.00 0.00 3.85
452 453 0.470268 GGGGCCGAATCTCTACTCCT 60.470 60.000 0.00 0.00 0.00 3.69
453 454 1.203025 GGGGCCGAATCTCTACTCCTA 60.203 57.143 0.00 0.00 0.00 2.94
454 455 2.595238 GGGCCGAATCTCTACTCCTAA 58.405 52.381 0.00 0.00 0.00 2.69
455 456 3.166679 GGGCCGAATCTCTACTCCTAAT 58.833 50.000 0.00 0.00 0.00 1.73
456 457 3.056465 GGGCCGAATCTCTACTCCTAATG 60.056 52.174 0.00 0.00 0.00 1.90
457 458 3.056465 GGCCGAATCTCTACTCCTAATGG 60.056 52.174 0.00 0.00 0.00 3.16
458 459 3.827302 GCCGAATCTCTACTCCTAATGGA 59.173 47.826 0.00 0.00 40.69 3.41
470 471 3.450904 TCCTAATGGAGCAGTTGGTAGT 58.549 45.455 0.00 0.00 37.46 2.73
471 472 3.451178 TCCTAATGGAGCAGTTGGTAGTC 59.549 47.826 0.00 0.00 37.46 2.59
480 481 2.027192 GCAGTTGGTAGTCTCCCATCAA 60.027 50.000 0.00 0.00 0.00 2.57
487 488 1.938585 AGTCTCCCATCAAAGACGGA 58.061 50.000 0.00 0.00 45.25 4.69
515 516 0.688087 GTCCTCGATTCCACCTCCCT 60.688 60.000 0.00 0.00 0.00 4.20
584 585 0.752658 TATGCTCCCACGATGTCCAG 59.247 55.000 0.00 0.00 0.00 3.86
806 830 4.537433 GCCGCCACAGCCTCTAGG 62.537 72.222 0.00 0.00 34.57 3.02
826 850 3.334604 CAGGGAAGCCATGGCCTA 58.665 61.111 33.14 0.00 43.17 3.93
829 853 0.624500 AGGGAAGCCATGGCCTAAGA 60.625 55.000 33.14 0.00 43.17 2.10
867 891 2.579201 GCCGTCTCCTGCAGCTTA 59.421 61.111 8.66 0.00 0.00 3.09
894 918 4.021925 GCCTCACCACCCGAGCTT 62.022 66.667 0.00 0.00 0.00 3.74
1006 1047 0.249615 ACGATGGCAGACGATGGATG 60.250 55.000 20.22 0.00 0.00 3.51
1023 1065 2.904866 GGCCTGGTTGTGTGCGAA 60.905 61.111 0.00 0.00 0.00 4.70
1109 1151 1.122019 AGTCTTCCTGTCCCGCACTT 61.122 55.000 0.00 0.00 0.00 3.16
1158 1201 0.851332 CCCCTTCCTCTTTCCCCCTT 60.851 60.000 0.00 0.00 0.00 3.95
1308 1352 4.410555 AGTCTTTGAAGGAGTTGGAGAAGT 59.589 41.667 0.00 0.00 0.00 3.01
1309 1353 4.752604 GTCTTTGAAGGAGTTGGAGAAGTC 59.247 45.833 0.00 0.00 0.00 3.01
1310 1354 4.656112 TCTTTGAAGGAGTTGGAGAAGTCT 59.344 41.667 0.00 0.00 32.73 3.24
1311 1355 4.608948 TTGAAGGAGTTGGAGAAGTCTC 57.391 45.455 0.00 0.00 42.14 3.36
1312 1356 3.850752 TGAAGGAGTTGGAGAAGTCTCT 58.149 45.455 8.19 0.00 42.48 3.10
1313 1357 4.999310 TGAAGGAGTTGGAGAAGTCTCTA 58.001 43.478 8.19 0.00 42.48 2.43
1314 1358 5.013547 TGAAGGAGTTGGAGAAGTCTCTAG 58.986 45.833 8.19 0.00 42.48 2.43
1315 1359 3.361786 AGGAGTTGGAGAAGTCTCTAGC 58.638 50.000 8.19 4.53 42.48 3.42
1316 1360 2.098443 GGAGTTGGAGAAGTCTCTAGCG 59.902 54.545 8.19 0.00 42.48 4.26
1317 1361 3.011119 GAGTTGGAGAAGTCTCTAGCGA 58.989 50.000 8.19 0.00 42.48 4.93
1318 1362 3.626930 AGTTGGAGAAGTCTCTAGCGAT 58.373 45.455 8.19 0.00 42.48 4.58
1319 1363 3.380004 AGTTGGAGAAGTCTCTAGCGATG 59.620 47.826 8.19 0.00 42.48 3.84
1320 1364 1.678627 TGGAGAAGTCTCTAGCGATGC 59.321 52.381 8.19 0.00 42.48 3.91
1321 1365 1.678627 GGAGAAGTCTCTAGCGATGCA 59.321 52.381 8.19 0.00 42.48 3.96
1322 1366 2.099921 GGAGAAGTCTCTAGCGATGCAA 59.900 50.000 8.19 0.00 42.48 4.08
1323 1367 3.371168 GAGAAGTCTCTAGCGATGCAAG 58.629 50.000 0.00 0.00 39.81 4.01
1324 1368 2.757868 AGAAGTCTCTAGCGATGCAAGT 59.242 45.455 0.00 0.00 0.00 3.16
1325 1369 3.194542 AGAAGTCTCTAGCGATGCAAGTT 59.805 43.478 0.00 0.00 0.00 2.66
1326 1370 3.157932 AGTCTCTAGCGATGCAAGTTC 57.842 47.619 0.00 0.00 0.00 3.01
1327 1371 1.849219 GTCTCTAGCGATGCAAGTTCG 59.151 52.381 3.84 3.84 39.55 3.95
1408 1472 4.536090 TCCATTAGATTCAGTGGACAGGTT 59.464 41.667 0.00 0.00 35.91 3.50
1654 1718 7.228706 GCTTTATGTTAGTTATATGCACAGGGT 59.771 37.037 0.00 0.00 0.00 4.34
1727 1791 4.911390 AGACAAAAGATCGGTTTCCTGAT 58.089 39.130 0.00 0.00 0.00 2.90
1971 2043 3.498777 GTCTGGTTGTTCCTAAGTGCTTC 59.501 47.826 0.00 0.00 37.07 3.86
2014 2087 5.070847 TGATCAGCATTGAGTAGATTGCCTA 59.929 40.000 0.00 0.00 36.61 3.93
2147 2221 6.488344 TGCACAATGAAAACTGTATGAACCTA 59.512 34.615 0.00 0.00 0.00 3.08
2301 2375 1.034838 TTGTGGGCATAATGGGCGAC 61.035 55.000 0.00 0.00 41.40 5.19
2309 2383 3.304659 GGCATAATGGGCGACACAATAAG 60.305 47.826 0.00 0.00 0.00 1.73
2319 2393 5.106317 GGGCGACACAATAAGATTCAGAAAA 60.106 40.000 0.00 0.00 0.00 2.29
2610 2685 1.473434 GGGCTGGACTTACTTCCGATG 60.473 57.143 0.00 0.00 38.69 3.84
2641 2716 5.682943 TTTCGGTAAAGTGATTCAAGGTG 57.317 39.130 0.00 0.00 0.00 4.00
2669 2744 6.949715 TCGATTGTTTACTTAGGGTGGTTAT 58.050 36.000 0.00 0.00 0.00 1.89
2994 3088 3.325293 TGCTCTGAAGAATGTGGAGAC 57.675 47.619 0.00 0.00 0.00 3.36
3020 3114 0.890996 GACAAGGCTCACAACCCCTG 60.891 60.000 0.00 0.00 0.00 4.45
3050 3144 0.673644 ACCATCTGCGAGTTTTCCGG 60.674 55.000 0.00 0.00 0.00 5.14
3054 3148 0.179067 TCTGCGAGTTTTCCGGTGTT 60.179 50.000 0.00 0.00 0.00 3.32
3062 3156 0.472471 TTTTCCGGTGTTGAGCCTCT 59.528 50.000 0.00 0.00 0.00 3.69
3325 3419 3.944015 AGCTTCTGCCAATCTGTACATTC 59.056 43.478 0.00 0.00 40.80 2.67
3388 3482 9.274206 GTACAAGGAAGGACTGATATTATTTCC 57.726 37.037 0.00 0.00 34.29 3.13
3702 3800 7.814264 ACTGAAACTGGAATGGATATGATTC 57.186 36.000 0.00 0.00 0.00 2.52
3749 3876 4.250464 GTGGTACTGAAATTGTGATCCGA 58.750 43.478 0.00 0.00 0.00 4.55
3947 4074 6.507023 AGAAAAAGTTGACTTTATGCTGGTG 58.493 36.000 9.35 0.00 44.69 4.17
4080 4207 1.251251 GTCACTGCAGGGAAGCATTT 58.749 50.000 22.92 0.00 44.68 2.32
4111 4238 1.001181 GTTTGGCATGTTCCATGCAGT 59.999 47.619 25.41 0.00 46.21 4.40
4232 10557 6.954944 TCACTATTTCTTTTCAAGGTTGTCG 58.045 36.000 0.00 0.00 0.00 4.35
4249 10574 8.934507 AGGTTGTCGTGAAAATTTCAAAAATA 57.065 26.923 10.27 0.00 42.15 1.40
4350 10676 1.408702 GTCATCACTGCCTCTCTCTCC 59.591 57.143 0.00 0.00 0.00 3.71
4351 10677 0.752054 CATCACTGCCTCTCTCTCCC 59.248 60.000 0.00 0.00 0.00 4.30
4360 10686 1.566703 CCTCTCTCTCCCCTGTCACTA 59.433 57.143 0.00 0.00 0.00 2.74
4398 10724 4.753233 CAGAAATTTCACACAACCACCAA 58.247 39.130 19.99 0.00 0.00 3.67
4415 10741 3.934068 ACCAACAGTGAATAGGGTTACG 58.066 45.455 0.00 0.00 0.00 3.18
4424 10750 4.390909 GTGAATAGGGTTACGGTTTGTGAG 59.609 45.833 0.00 0.00 0.00 3.51
4832 11165 5.107109 TCCAATCAACGTCATCAAACTTG 57.893 39.130 0.00 0.00 0.00 3.16
4849 11183 4.402851 GGGCTCTTGCACATGTCA 57.597 55.556 0.00 0.00 43.35 3.58
4850 11184 1.878775 GGGCTCTTGCACATGTCAC 59.121 57.895 0.00 0.00 43.35 3.67
4851 11185 1.499056 GGCTCTTGCACATGTCACG 59.501 57.895 0.00 0.00 41.91 4.35
4852 11186 1.154338 GCTCTTGCACATGTCACGC 60.154 57.895 0.00 0.00 39.41 5.34
4853 11187 1.499056 CTCTTGCACATGTCACGCC 59.501 57.895 0.00 0.00 0.00 5.68
4854 11188 1.915614 CTCTTGCACATGTCACGCCC 61.916 60.000 0.00 0.00 0.00 6.13
4855 11189 2.203266 TTGCACATGTCACGCCCA 60.203 55.556 0.00 0.00 0.00 5.36
4856 11190 1.794151 CTTGCACATGTCACGCCCAA 61.794 55.000 0.00 0.00 0.00 4.12
4857 11191 1.794151 TTGCACATGTCACGCCCAAG 61.794 55.000 0.00 0.00 0.00 3.61
4858 11192 1.965930 GCACATGTCACGCCCAAGA 60.966 57.895 0.00 0.00 0.00 3.02
4859 11193 1.308069 GCACATGTCACGCCCAAGAT 61.308 55.000 0.00 0.00 0.00 2.40
4860 11194 0.448990 CACATGTCACGCCCAAGATG 59.551 55.000 0.00 0.00 0.00 2.90
4861 11195 1.308069 ACATGTCACGCCCAAGATGC 61.308 55.000 0.00 0.00 0.00 3.91
4868 11202 4.189580 GCCCAAGATGCGGCCCTA 62.190 66.667 0.00 0.00 39.39 3.53
4869 11203 2.839098 CCCAAGATGCGGCCCTAT 59.161 61.111 0.00 0.00 0.00 2.57
4870 11204 1.302832 CCCAAGATGCGGCCCTATC 60.303 63.158 0.00 0.81 0.00 2.08
4871 11205 1.302832 CCAAGATGCGGCCCTATCC 60.303 63.158 9.62 0.00 0.00 2.59
4872 11206 1.757306 CAAGATGCGGCCCTATCCT 59.243 57.895 9.62 0.00 0.00 3.24
4873 11207 0.976641 CAAGATGCGGCCCTATCCTA 59.023 55.000 9.62 0.00 0.00 2.94
4874 11208 1.347707 CAAGATGCGGCCCTATCCTAA 59.652 52.381 9.62 0.00 0.00 2.69
4875 11209 1.729586 AGATGCGGCCCTATCCTAAA 58.270 50.000 9.62 0.00 0.00 1.85
4876 11210 1.625818 AGATGCGGCCCTATCCTAAAG 59.374 52.381 9.62 0.00 0.00 1.85
4877 11211 0.693049 ATGCGGCCCTATCCTAAAGG 59.307 55.000 0.00 0.00 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.997196 GATAGCGAAACCGTGGACAC 59.003 55.000 0.00 0.00 0.00 3.67
1 2 0.457166 CGATAGCGAAACCGTGGACA 60.457 55.000 0.00 0.00 40.82 4.02
2 3 1.143969 CCGATAGCGAAACCGTGGAC 61.144 60.000 0.00 0.00 40.82 4.02
3 4 1.140161 CCGATAGCGAAACCGTGGA 59.860 57.895 0.00 0.00 40.82 4.02
4 5 1.143969 GACCGATAGCGAAACCGTGG 61.144 60.000 0.00 0.00 40.82 4.94
5 6 0.457166 TGACCGATAGCGAAACCGTG 60.457 55.000 0.00 0.00 40.82 4.94
6 7 0.458669 ATGACCGATAGCGAAACCGT 59.541 50.000 0.00 0.00 40.82 4.83
7 8 1.257936 CAATGACCGATAGCGAAACCG 59.742 52.381 0.00 0.00 40.82 4.44
8 9 2.546778 TCAATGACCGATAGCGAAACC 58.453 47.619 0.00 0.00 40.82 3.27
9 10 3.541516 CGTTCAATGACCGATAGCGAAAC 60.542 47.826 0.00 0.00 40.82 2.78
10 11 2.601314 CGTTCAATGACCGATAGCGAAA 59.399 45.455 0.00 0.00 40.82 3.46
11 12 2.159352 TCGTTCAATGACCGATAGCGAA 60.159 45.455 0.00 0.00 40.82 4.70
12 13 1.402613 TCGTTCAATGACCGATAGCGA 59.597 47.619 0.00 0.00 40.82 4.93
13 14 1.835121 TCGTTCAATGACCGATAGCG 58.165 50.000 0.00 0.00 37.24 4.26
14 15 2.540101 CCTTCGTTCAATGACCGATAGC 59.460 50.000 3.30 0.00 0.00 2.97
15 16 3.123804 CCCTTCGTTCAATGACCGATAG 58.876 50.000 3.30 4.86 0.00 2.08
16 17 2.159014 CCCCTTCGTTCAATGACCGATA 60.159 50.000 3.30 0.00 0.00 2.92
17 18 1.406887 CCCCTTCGTTCAATGACCGAT 60.407 52.381 3.30 0.00 0.00 4.18
18 19 0.036765 CCCCTTCGTTCAATGACCGA 60.037 55.000 0.00 0.00 0.00 4.69
19 20 0.321298 ACCCCTTCGTTCAATGACCG 60.321 55.000 0.00 0.00 0.00 4.79
20 21 1.905637 AACCCCTTCGTTCAATGACC 58.094 50.000 0.00 0.00 0.00 4.02
21 22 3.554259 GAAACCCCTTCGTTCAATGAC 57.446 47.619 0.00 0.00 0.00 3.06
31 32 3.336138 AGAGATGAACGAAACCCCTTC 57.664 47.619 0.00 0.00 0.00 3.46
32 33 4.469945 TCATAGAGATGAACGAAACCCCTT 59.530 41.667 0.00 0.00 39.20 3.95
33 34 4.030913 TCATAGAGATGAACGAAACCCCT 58.969 43.478 0.00 0.00 39.20 4.79
34 35 4.402056 TCATAGAGATGAACGAAACCCC 57.598 45.455 0.00 0.00 39.20 4.95
35 36 6.927294 AAATCATAGAGATGAACGAAACCC 57.073 37.500 0.00 0.00 45.23 4.11
36 37 7.306632 CGGTAAATCATAGAGATGAACGAAACC 60.307 40.741 0.00 0.00 45.23 3.27
37 38 7.434307 TCGGTAAATCATAGAGATGAACGAAAC 59.566 37.037 0.00 0.00 45.23 2.78
38 39 7.485810 TCGGTAAATCATAGAGATGAACGAAA 58.514 34.615 0.00 0.00 45.23 3.46
39 40 7.034685 TCGGTAAATCATAGAGATGAACGAA 57.965 36.000 0.00 0.00 45.23 3.85
40 41 6.628919 TCGGTAAATCATAGAGATGAACGA 57.371 37.500 0.00 0.00 45.23 3.85
41 42 6.144080 GGTTCGGTAAATCATAGAGATGAACG 59.856 42.308 0.00 0.00 45.23 3.95
42 43 7.210873 AGGTTCGGTAAATCATAGAGATGAAC 58.789 38.462 0.00 0.00 45.23 3.18
43 44 7.361457 AGGTTCGGTAAATCATAGAGATGAA 57.639 36.000 0.00 0.00 45.23 2.57
44 45 6.015350 GGAGGTTCGGTAAATCATAGAGATGA 60.015 42.308 0.00 0.00 46.13 2.92
45 46 6.159988 GGAGGTTCGGTAAATCATAGAGATG 58.840 44.000 0.00 0.00 36.96 2.90
46 47 5.047943 CGGAGGTTCGGTAAATCATAGAGAT 60.048 44.000 0.00 0.00 39.09 2.75
47 48 4.277672 CGGAGGTTCGGTAAATCATAGAGA 59.722 45.833 0.00 0.00 0.00 3.10
48 49 4.547532 CGGAGGTTCGGTAAATCATAGAG 58.452 47.826 0.00 0.00 0.00 2.43
49 50 4.579454 CGGAGGTTCGGTAAATCATAGA 57.421 45.455 0.00 0.00 0.00 1.98
66 67 2.611518 CTTAAGCTTGTGACTCCGGAG 58.388 52.381 30.11 30.11 0.00 4.63
67 68 1.275291 CCTTAAGCTTGTGACTCCGGA 59.725 52.381 9.86 2.93 0.00 5.14
68 69 1.002087 ACCTTAAGCTTGTGACTCCGG 59.998 52.381 9.86 0.00 0.00 5.14
69 70 2.457366 ACCTTAAGCTTGTGACTCCG 57.543 50.000 9.86 0.00 0.00 4.63
70 71 5.488341 TGATTACCTTAAGCTTGTGACTCC 58.512 41.667 9.86 0.00 0.00 3.85
71 72 6.818644 TCATGATTACCTTAAGCTTGTGACTC 59.181 38.462 9.86 0.00 32.92 3.36
72 73 6.711277 TCATGATTACCTTAAGCTTGTGACT 58.289 36.000 9.86 0.00 32.92 3.41
73 74 6.985188 TCATGATTACCTTAAGCTTGTGAC 57.015 37.500 9.86 0.00 32.92 3.67
74 75 9.276590 CATATCATGATTACCTTAAGCTTGTGA 57.723 33.333 14.65 0.00 32.92 3.58
75 76 8.019669 GCATATCATGATTACCTTAAGCTTGTG 58.980 37.037 14.65 1.13 32.92 3.33
76 77 7.941238 AGCATATCATGATTACCTTAAGCTTGT 59.059 33.333 14.65 0.59 32.92 3.16
77 78 8.235226 CAGCATATCATGATTACCTTAAGCTTG 58.765 37.037 14.65 0.00 32.53 4.01
78 79 8.159447 TCAGCATATCATGATTACCTTAAGCTT 58.841 33.333 14.65 3.48 0.00 3.74
79 80 7.683578 TCAGCATATCATGATTACCTTAAGCT 58.316 34.615 14.65 5.68 0.00 3.74
80 81 7.605691 ACTCAGCATATCATGATTACCTTAAGC 59.394 37.037 14.65 3.27 0.00 3.09
81 82 8.933807 CACTCAGCATATCATGATTACCTTAAG 58.066 37.037 14.65 6.75 0.00 1.85
82 83 8.432013 ACACTCAGCATATCATGATTACCTTAA 58.568 33.333 14.65 0.00 0.00 1.85
83 84 7.966812 ACACTCAGCATATCATGATTACCTTA 58.033 34.615 14.65 0.00 0.00 2.69
84 85 6.835174 ACACTCAGCATATCATGATTACCTT 58.165 36.000 14.65 0.00 0.00 3.50
85 86 6.430962 ACACTCAGCATATCATGATTACCT 57.569 37.500 14.65 4.79 0.00 3.08
86 87 7.875041 ACTAACACTCAGCATATCATGATTACC 59.125 37.037 14.65 2.44 0.00 2.85
87 88 8.824159 ACTAACACTCAGCATATCATGATTAC 57.176 34.615 14.65 3.91 0.00 1.89
89 90 8.093307 CCTACTAACACTCAGCATATCATGATT 58.907 37.037 14.65 0.00 0.00 2.57
90 91 7.452813 TCCTACTAACACTCAGCATATCATGAT 59.547 37.037 13.81 13.81 0.00 2.45
91 92 6.777580 TCCTACTAACACTCAGCATATCATGA 59.222 38.462 0.00 0.00 0.00 3.07
92 93 6.865726 GTCCTACTAACACTCAGCATATCATG 59.134 42.308 0.00 0.00 0.00 3.07
93 94 6.551227 TGTCCTACTAACACTCAGCATATCAT 59.449 38.462 0.00 0.00 0.00 2.45
94 95 5.891551 TGTCCTACTAACACTCAGCATATCA 59.108 40.000 0.00 0.00 0.00 2.15
95 96 6.392625 TGTCCTACTAACACTCAGCATATC 57.607 41.667 0.00 0.00 0.00 1.63
96 97 5.303078 CCTGTCCTACTAACACTCAGCATAT 59.697 44.000 0.00 0.00 0.00 1.78
97 98 4.645136 CCTGTCCTACTAACACTCAGCATA 59.355 45.833 0.00 0.00 0.00 3.14
98 99 3.449018 CCTGTCCTACTAACACTCAGCAT 59.551 47.826 0.00 0.00 0.00 3.79
99 100 2.826128 CCTGTCCTACTAACACTCAGCA 59.174 50.000 0.00 0.00 0.00 4.41
100 101 3.090037 TCCTGTCCTACTAACACTCAGC 58.910 50.000 0.00 0.00 0.00 4.26
101 102 4.156922 CACTCCTGTCCTACTAACACTCAG 59.843 50.000 0.00 0.00 0.00 3.35
102 103 4.079970 CACTCCTGTCCTACTAACACTCA 58.920 47.826 0.00 0.00 0.00 3.41
103 104 4.333690 TCACTCCTGTCCTACTAACACTC 58.666 47.826 0.00 0.00 0.00 3.51
104 105 4.383931 TCACTCCTGTCCTACTAACACT 57.616 45.455 0.00 0.00 0.00 3.55
105 106 4.705507 TCATCACTCCTGTCCTACTAACAC 59.294 45.833 0.00 0.00 0.00 3.32
106 107 4.930696 TCATCACTCCTGTCCTACTAACA 58.069 43.478 0.00 0.00 0.00 2.41
107 108 5.194432 TCTCATCACTCCTGTCCTACTAAC 58.806 45.833 0.00 0.00 0.00 2.34
108 109 5.452341 TCTCATCACTCCTGTCCTACTAA 57.548 43.478 0.00 0.00 0.00 2.24
109 110 5.452341 TTCTCATCACTCCTGTCCTACTA 57.548 43.478 0.00 0.00 0.00 1.82
110 111 4.323569 TTCTCATCACTCCTGTCCTACT 57.676 45.455 0.00 0.00 0.00 2.57
111 112 6.909550 ATATTCTCATCACTCCTGTCCTAC 57.090 41.667 0.00 0.00 0.00 3.18
112 113 9.607333 AAATATATTCTCATCACTCCTGTCCTA 57.393 33.333 0.00 0.00 0.00 2.94
113 114 8.373981 CAAATATATTCTCATCACTCCTGTCCT 58.626 37.037 0.00 0.00 0.00 3.85
114 115 8.153550 ACAAATATATTCTCATCACTCCTGTCC 58.846 37.037 0.00 0.00 0.00 4.02
115 116 8.986847 CACAAATATATTCTCATCACTCCTGTC 58.013 37.037 0.00 0.00 0.00 3.51
116 117 7.935755 CCACAAATATATTCTCATCACTCCTGT 59.064 37.037 0.00 0.00 0.00 4.00
117 118 8.152898 TCCACAAATATATTCTCATCACTCCTG 58.847 37.037 0.00 0.00 0.00 3.86
118 119 8.267620 TCCACAAATATATTCTCATCACTCCT 57.732 34.615 0.00 0.00 0.00 3.69
119 120 8.778358 GTTCCACAAATATATTCTCATCACTCC 58.222 37.037 0.00 0.00 0.00 3.85
120 121 9.553064 AGTTCCACAAATATATTCTCATCACTC 57.447 33.333 0.00 0.00 0.00 3.51
121 122 9.334947 CAGTTCCACAAATATATTCTCATCACT 57.665 33.333 0.00 0.00 0.00 3.41
122 123 9.113838 ACAGTTCCACAAATATATTCTCATCAC 57.886 33.333 0.00 0.00 0.00 3.06
123 124 9.685276 AACAGTTCCACAAATATATTCTCATCA 57.315 29.630 0.00 0.00 0.00 3.07
126 127 9.513906 TGAAACAGTTCCACAAATATATTCTCA 57.486 29.630 0.00 0.00 32.28 3.27
135 136 8.253113 GGATATCAATGAAACAGTTCCACAAAT 58.747 33.333 4.83 0.00 32.28 2.32
136 137 7.574779 CGGATATCAATGAAACAGTTCCACAAA 60.575 37.037 4.83 0.00 32.28 2.83
137 138 6.128035 CGGATATCAATGAAACAGTTCCACAA 60.128 38.462 4.83 0.00 32.28 3.33
138 139 5.353956 CGGATATCAATGAAACAGTTCCACA 59.646 40.000 4.83 0.00 32.28 4.17
139 140 5.220854 CCGGATATCAATGAAACAGTTCCAC 60.221 44.000 0.00 0.00 32.28 4.02
140 141 4.881273 CCGGATATCAATGAAACAGTTCCA 59.119 41.667 0.00 0.00 32.28 3.53
141 142 5.123227 TCCGGATATCAATGAAACAGTTCC 58.877 41.667 0.00 0.00 32.28 3.62
142 143 6.677781 TTCCGGATATCAATGAAACAGTTC 57.322 37.500 4.15 0.00 0.00 3.01
143 144 7.993183 AGTATTCCGGATATCAATGAAACAGTT 59.007 33.333 4.15 0.00 0.00 3.16
144 145 7.509546 AGTATTCCGGATATCAATGAAACAGT 58.490 34.615 4.15 0.00 0.00 3.55
145 146 7.969536 AGTATTCCGGATATCAATGAAACAG 57.030 36.000 4.15 0.00 0.00 3.16
146 147 8.378172 GAAGTATTCCGGATATCAATGAAACA 57.622 34.615 4.15 0.00 39.83 2.83
163 164 4.985538 TCAGAACCTCTCGGAAGTATTC 57.014 45.455 0.00 0.00 46.67 1.75
164 165 5.725362 CTTTCAGAACCTCTCGGAAGTATT 58.275 41.667 0.00 0.00 39.09 1.89
165 166 4.382147 GCTTTCAGAACCTCTCGGAAGTAT 60.382 45.833 0.00 0.00 39.09 2.12
166 167 3.056749 GCTTTCAGAACCTCTCGGAAGTA 60.057 47.826 0.00 0.00 39.09 2.24
167 168 2.289133 GCTTTCAGAACCTCTCGGAAGT 60.289 50.000 0.00 0.00 39.09 3.01
168 169 2.342179 GCTTTCAGAACCTCTCGGAAG 58.658 52.381 0.00 0.00 39.09 3.46
169 170 1.336887 CGCTTTCAGAACCTCTCGGAA 60.337 52.381 0.00 0.00 36.59 4.30
170 171 0.243907 CGCTTTCAGAACCTCTCGGA 59.756 55.000 0.00 0.00 0.00 4.55
171 172 0.038159 ACGCTTTCAGAACCTCTCGG 60.038 55.000 0.00 0.00 0.00 4.63
172 173 1.784525 AACGCTTTCAGAACCTCTCG 58.215 50.000 0.00 0.00 0.00 4.04
173 174 2.155924 CGAAACGCTTTCAGAACCTCTC 59.844 50.000 9.90 0.00 39.63 3.20
174 175 2.135933 CGAAACGCTTTCAGAACCTCT 58.864 47.619 9.90 0.00 39.63 3.69
175 176 1.194772 CCGAAACGCTTTCAGAACCTC 59.805 52.381 9.90 0.00 39.63 3.85
176 177 1.226746 CCGAAACGCTTTCAGAACCT 58.773 50.000 9.90 0.00 39.63 3.50
177 178 0.237498 CCCGAAACGCTTTCAGAACC 59.763 55.000 9.90 0.00 39.63 3.62
178 179 0.237498 CCCCGAAACGCTTTCAGAAC 59.763 55.000 9.90 0.00 39.63 3.01
179 180 0.179040 ACCCCGAAACGCTTTCAGAA 60.179 50.000 9.90 0.00 39.63 3.02
180 181 0.601841 GACCCCGAAACGCTTTCAGA 60.602 55.000 9.90 0.00 39.63 3.27
181 182 0.882927 TGACCCCGAAACGCTTTCAG 60.883 55.000 9.90 0.95 39.63 3.02
182 183 1.146485 TGACCCCGAAACGCTTTCA 59.854 52.632 9.90 0.00 39.63 2.69
183 184 1.572941 GTGACCCCGAAACGCTTTC 59.427 57.895 0.00 0.00 36.32 2.62
184 185 1.895231 GGTGACCCCGAAACGCTTT 60.895 57.895 0.00 0.00 0.00 3.51
185 186 2.281276 GGTGACCCCGAAACGCTT 60.281 61.111 0.00 0.00 0.00 4.68
194 195 3.205851 AAAGCCTTCCGGTGACCCC 62.206 63.158 0.00 0.00 0.00 4.95
195 196 1.674651 GAAAGCCTTCCGGTGACCC 60.675 63.158 0.00 0.00 0.00 4.46
196 197 2.033194 CGAAAGCCTTCCGGTGACC 61.033 63.158 0.00 0.00 0.00 4.02
197 198 2.033194 CCGAAAGCCTTCCGGTGAC 61.033 63.158 0.00 0.00 0.00 3.67
198 199 2.345991 CCGAAAGCCTTCCGGTGA 59.654 61.111 0.00 0.00 0.00 4.02
199 200 2.032071 ACCGAAAGCCTTCCGGTG 59.968 61.111 7.07 0.00 37.20 4.94
200 201 2.032071 CACCGAAAGCCTTCCGGT 59.968 61.111 0.33 0.33 38.30 5.28
201 202 0.676782 ATTCACCGAAAGCCTTCCGG 60.677 55.000 0.00 0.00 33.84 5.14
202 203 2.018542 TATTCACCGAAAGCCTTCCG 57.981 50.000 0.00 0.00 0.00 4.30
203 204 2.544267 CGATATTCACCGAAAGCCTTCC 59.456 50.000 0.00 0.00 0.00 3.46
204 205 3.001330 CACGATATTCACCGAAAGCCTTC 59.999 47.826 0.00 0.00 0.00 3.46
205 206 2.936498 CACGATATTCACCGAAAGCCTT 59.064 45.455 0.00 0.00 0.00 4.35
206 207 2.093658 ACACGATATTCACCGAAAGCCT 60.094 45.455 0.00 0.00 0.00 4.58
207 208 2.277084 ACACGATATTCACCGAAAGCC 58.723 47.619 0.00 0.00 0.00 4.35
208 209 4.110482 AGTACACGATATTCACCGAAAGC 58.890 43.478 0.00 0.00 0.00 3.51
209 210 6.414109 CAGTAGTACACGATATTCACCGAAAG 59.586 42.308 2.52 0.00 0.00 2.62
210 211 6.260377 CAGTAGTACACGATATTCACCGAAA 58.740 40.000 2.52 0.00 0.00 3.46
211 212 5.220912 CCAGTAGTACACGATATTCACCGAA 60.221 44.000 2.52 0.00 0.00 4.30
212 213 4.274214 CCAGTAGTACACGATATTCACCGA 59.726 45.833 2.52 0.00 0.00 4.69
213 214 4.534168 CCAGTAGTACACGATATTCACCG 58.466 47.826 2.52 0.00 0.00 4.94
214 215 4.340381 ACCCAGTAGTACACGATATTCACC 59.660 45.833 2.52 0.00 0.00 4.02
215 216 5.511234 ACCCAGTAGTACACGATATTCAC 57.489 43.478 2.52 0.00 0.00 3.18
216 217 7.828508 AATACCCAGTAGTACACGATATTCA 57.171 36.000 2.52 0.00 0.00 2.57
217 218 8.239998 GGTAATACCCAGTAGTACACGATATTC 58.760 40.741 12.69 0.00 40.08 1.75
218 219 7.094634 CGGTAATACCCAGTAGTACACGATATT 60.095 40.741 12.69 4.55 40.08 1.28
219 220 6.372659 CGGTAATACCCAGTAGTACACGATAT 59.627 42.308 12.69 0.00 40.08 1.63
220 221 5.700832 CGGTAATACCCAGTAGTACACGATA 59.299 44.000 12.69 0.00 40.08 2.92
221 222 4.516698 CGGTAATACCCAGTAGTACACGAT 59.483 45.833 12.69 0.00 40.08 3.73
222 223 3.876914 CGGTAATACCCAGTAGTACACGA 59.123 47.826 12.69 0.00 40.08 4.35
223 224 3.876914 TCGGTAATACCCAGTAGTACACG 59.123 47.826 12.69 12.66 40.08 4.49
224 225 6.396829 AATCGGTAATACCCAGTAGTACAC 57.603 41.667 12.69 3.86 40.08 2.90
225 226 8.710749 AATAATCGGTAATACCCAGTAGTACA 57.289 34.615 12.69 0.00 40.08 2.90
226 227 9.987272 AAAATAATCGGTAATACCCAGTAGTAC 57.013 33.333 3.51 4.27 38.38 2.73
250 251 9.463902 TCGGAAACATTTTCCACCTATATAAAA 57.536 29.630 16.11 0.00 38.49 1.52
251 252 9.116067 CTCGGAAACATTTTCCACCTATATAAA 57.884 33.333 16.11 0.00 38.49 1.40
252 253 7.717875 CCTCGGAAACATTTTCCACCTATATAA 59.282 37.037 16.11 0.00 38.49 0.98
253 254 7.071447 TCCTCGGAAACATTTTCCACCTATATA 59.929 37.037 16.11 0.00 38.49 0.86
254 255 6.062095 CCTCGGAAACATTTTCCACCTATAT 58.938 40.000 16.11 0.00 38.49 0.86
255 256 5.190132 TCCTCGGAAACATTTTCCACCTATA 59.810 40.000 16.11 0.00 38.49 1.31
256 257 4.018779 TCCTCGGAAACATTTTCCACCTAT 60.019 41.667 16.11 0.00 38.49 2.57
257 258 3.328343 TCCTCGGAAACATTTTCCACCTA 59.672 43.478 16.11 0.00 38.49 3.08
258 259 2.107552 TCCTCGGAAACATTTTCCACCT 59.892 45.455 16.11 0.00 38.49 4.00
259 260 2.510613 TCCTCGGAAACATTTTCCACC 58.489 47.619 16.11 0.00 38.49 4.61
260 261 3.506067 ACATCCTCGGAAACATTTTCCAC 59.494 43.478 16.11 0.00 38.49 4.02
261 262 3.761897 ACATCCTCGGAAACATTTTCCA 58.238 40.909 16.11 4.67 38.49 3.53
262 263 4.783764 AACATCCTCGGAAACATTTTCC 57.216 40.909 7.52 7.52 35.27 3.13
263 264 8.757164 AATTTAACATCCTCGGAAACATTTTC 57.243 30.769 0.00 0.00 0.00 2.29
355 356 2.225017 TCCACCTCTTGGCCTTTTAAGG 60.225 50.000 3.32 6.49 46.47 2.69
356 357 3.154827 TCCACCTCTTGGCCTTTTAAG 57.845 47.619 3.32 0.00 46.47 1.85
357 358 3.496331 CTTCCACCTCTTGGCCTTTTAA 58.504 45.455 3.32 0.00 46.47 1.52
358 359 2.225017 CCTTCCACCTCTTGGCCTTTTA 60.225 50.000 3.32 0.00 46.47 1.52
359 360 1.481242 CCTTCCACCTCTTGGCCTTTT 60.481 52.381 3.32 0.00 46.47 2.27
360 361 0.113190 CCTTCCACCTCTTGGCCTTT 59.887 55.000 3.32 0.00 46.47 3.11
361 362 0.772124 TCCTTCCACCTCTTGGCCTT 60.772 55.000 3.32 0.00 46.47 4.35
362 363 0.772124 TTCCTTCCACCTCTTGGCCT 60.772 55.000 3.32 0.00 46.47 5.19
363 364 0.112412 TTTCCTTCCACCTCTTGGCC 59.888 55.000 0.00 0.00 46.47 5.36
364 365 1.202940 AGTTTCCTTCCACCTCTTGGC 60.203 52.381 0.00 0.00 46.47 4.52
366 367 2.887152 CCAAGTTTCCTTCCACCTCTTG 59.113 50.000 0.00 0.00 0.00 3.02
367 368 2.158460 CCCAAGTTTCCTTCCACCTCTT 60.158 50.000 0.00 0.00 0.00 2.85
368 369 1.425448 CCCAAGTTTCCTTCCACCTCT 59.575 52.381 0.00 0.00 0.00 3.69
369 370 1.911057 CCCAAGTTTCCTTCCACCTC 58.089 55.000 0.00 0.00 0.00 3.85
370 371 0.178961 GCCCAAGTTTCCTTCCACCT 60.179 55.000 0.00 0.00 0.00 4.00
371 372 1.185618 GGCCCAAGTTTCCTTCCACC 61.186 60.000 0.00 0.00 0.00 4.61
372 373 0.469144 TGGCCCAAGTTTCCTTCCAC 60.469 55.000 0.00 0.00 0.00 4.02
373 374 0.263172 TTGGCCCAAGTTTCCTTCCA 59.737 50.000 0.00 0.00 0.00 3.53
374 375 1.419381 TTTGGCCCAAGTTTCCTTCC 58.581 50.000 0.00 0.00 0.00 3.46
375 376 3.466836 CTTTTTGGCCCAAGTTTCCTTC 58.533 45.455 0.00 0.00 0.00 3.46
376 377 2.172505 CCTTTTTGGCCCAAGTTTCCTT 59.827 45.455 0.00 0.00 0.00 3.36
377 378 1.768275 CCTTTTTGGCCCAAGTTTCCT 59.232 47.619 0.00 0.00 0.00 3.36
378 379 2.254546 CCTTTTTGGCCCAAGTTTCC 57.745 50.000 0.00 0.00 0.00 3.13
399 400 0.895559 GGAGGCACTTTCCCACTTGG 60.896 60.000 0.00 0.00 41.55 3.61
400 401 2.646121 GGAGGCACTTTCCCACTTG 58.354 57.895 0.00 0.00 41.55 3.16
406 407 1.000771 GGGAAGGGAGGCACTTTCC 60.001 63.158 12.62 12.62 41.55 3.13
407 408 1.377333 CGGGAAGGGAGGCACTTTC 60.377 63.158 0.00 0.00 41.55 2.62
408 409 1.423794 TTCGGGAAGGGAGGCACTTT 61.424 55.000 0.00 0.00 41.55 2.66
409 410 1.842381 CTTCGGGAAGGGAGGCACTT 61.842 60.000 0.38 0.00 34.69 3.16
410 411 2.294078 CTTCGGGAAGGGAGGCACT 61.294 63.158 0.38 0.00 36.54 4.40
411 412 2.269241 CTTCGGGAAGGGAGGCAC 59.731 66.667 0.38 0.00 34.87 5.01
424 425 2.942648 GATTCGGCCCCCTTCCTTCG 62.943 65.000 0.00 0.00 0.00 3.79
425 426 1.152943 GATTCGGCCCCCTTCCTTC 60.153 63.158 0.00 0.00 0.00 3.46
426 427 1.619669 AGATTCGGCCCCCTTCCTT 60.620 57.895 0.00 0.00 0.00 3.36
427 428 2.042930 AGATTCGGCCCCCTTCCT 59.957 61.111 0.00 0.00 0.00 3.36
428 429 0.763223 TAGAGATTCGGCCCCCTTCC 60.763 60.000 0.00 0.00 0.00 3.46
429 430 0.393448 GTAGAGATTCGGCCCCCTTC 59.607 60.000 0.00 0.00 0.00 3.46
430 431 0.031010 AGTAGAGATTCGGCCCCCTT 60.031 55.000 0.00 0.00 0.00 3.95
431 432 0.470268 GAGTAGAGATTCGGCCCCCT 60.470 60.000 0.00 0.00 0.00 4.79
432 433 1.473497 GGAGTAGAGATTCGGCCCCC 61.473 65.000 0.00 0.00 0.00 5.40
433 434 0.470268 AGGAGTAGAGATTCGGCCCC 60.470 60.000 0.00 0.00 0.00 5.80
434 435 2.289592 TAGGAGTAGAGATTCGGCCC 57.710 55.000 0.00 0.00 0.00 5.80
435 436 3.056465 CCATTAGGAGTAGAGATTCGGCC 60.056 52.174 0.00 0.00 36.89 6.13
436 437 3.827302 TCCATTAGGAGTAGAGATTCGGC 59.173 47.826 0.00 0.00 39.61 5.54
449 450 3.450904 ACTACCAACTGCTCCATTAGGA 58.549 45.455 0.00 0.00 43.21 2.94
450 451 3.452627 AGACTACCAACTGCTCCATTAGG 59.547 47.826 0.00 0.00 0.00 2.69
451 452 4.442192 GGAGACTACCAACTGCTCCATTAG 60.442 50.000 0.00 0.00 43.55 1.73
452 453 3.451178 GGAGACTACCAACTGCTCCATTA 59.549 47.826 0.00 0.00 43.55 1.90
453 454 2.237392 GGAGACTACCAACTGCTCCATT 59.763 50.000 0.00 0.00 43.55 3.16
454 455 1.834263 GGAGACTACCAACTGCTCCAT 59.166 52.381 0.00 0.00 43.55 3.41
455 456 1.267121 GGAGACTACCAACTGCTCCA 58.733 55.000 0.00 0.00 43.55 3.86
456 457 0.537653 GGGAGACTACCAACTGCTCC 59.462 60.000 0.00 0.00 43.40 4.70
457 458 1.267121 TGGGAGACTACCAACTGCTC 58.733 55.000 3.02 0.00 34.44 4.26
458 459 1.834263 GATGGGAGACTACCAACTGCT 59.166 52.381 11.43 0.00 42.17 4.24
459 460 1.555075 TGATGGGAGACTACCAACTGC 59.445 52.381 11.43 1.44 42.17 4.40
460 461 3.981071 TTGATGGGAGACTACCAACTG 57.019 47.619 11.43 0.00 42.17 3.16
461 462 4.020128 GTCTTTGATGGGAGACTACCAACT 60.020 45.833 11.43 0.00 42.17 3.16
462 463 4.254492 GTCTTTGATGGGAGACTACCAAC 58.746 47.826 11.43 9.02 42.17 3.77
463 464 3.056107 CGTCTTTGATGGGAGACTACCAA 60.056 47.826 11.43 0.00 42.17 3.67
464 465 2.496070 CGTCTTTGATGGGAGACTACCA 59.504 50.000 9.45 9.45 43.22 3.25
465 466 2.159085 CCGTCTTTGATGGGAGACTACC 60.159 54.545 0.00 0.00 40.03 3.18
466 467 2.758979 TCCGTCTTTGATGGGAGACTAC 59.241 50.000 6.04 0.00 40.03 2.73
467 468 3.095912 TCCGTCTTTGATGGGAGACTA 57.904 47.619 6.04 0.00 40.03 2.59
468 469 1.938585 TCCGTCTTTGATGGGAGACT 58.061 50.000 6.04 0.00 40.03 3.24
469 470 2.990066 ATCCGTCTTTGATGGGAGAC 57.010 50.000 6.04 0.00 39.09 3.36
470 471 4.301072 AAAATCCGTCTTTGATGGGAGA 57.699 40.909 6.04 0.00 39.09 3.71
505 506 2.257541 GAGGGGATGAGGGAGGTGGA 62.258 65.000 0.00 0.00 0.00 4.02
515 516 1.461461 GGGGGAATCGAGGGGATGA 60.461 63.158 0.00 0.00 34.93 2.92
544 545 6.475402 GCATACCGATTTTTATTTCCTGGTTG 59.525 38.462 0.00 0.00 0.00 3.77
826 850 2.128507 GGACCTCGAGGCCGATCTT 61.129 63.158 31.56 10.06 44.62 2.40
885 909 4.681978 GTGACGGCAAGCTCGGGT 62.682 66.667 0.00 0.00 0.00 5.28
894 918 2.110213 GAGGTTGGTGTGACGGCA 59.890 61.111 0.00 0.00 0.00 5.69
991 1032 2.190313 GCCATCCATCGTCTGCCA 59.810 61.111 0.00 0.00 0.00 4.92
1006 1047 2.904866 TTCGCACACAACCAGGCC 60.905 61.111 0.00 0.00 0.00 5.19
1023 1065 1.446792 CGCGTGAGAACTGCATCCT 60.447 57.895 0.00 0.00 0.00 3.24
1109 1151 0.692756 TGTGATAATGGGGAGGCGGA 60.693 55.000 0.00 0.00 0.00 5.54
1158 1201 2.292587 GGGAGAAGGGAGAGGAGAGAAA 60.293 54.545 0.00 0.00 0.00 2.52
1308 1352 1.472878 ACGAACTTGCATCGCTAGAGA 59.527 47.619 8.06 0.00 43.88 3.10
1309 1353 1.849219 GACGAACTTGCATCGCTAGAG 59.151 52.381 8.06 0.00 43.88 2.43
1310 1354 1.472878 AGACGAACTTGCATCGCTAGA 59.527 47.619 8.06 0.00 43.88 2.43
1311 1355 1.914634 AGACGAACTTGCATCGCTAG 58.085 50.000 8.06 0.00 43.88 3.42
1312 1356 2.363788 AAGACGAACTTGCATCGCTA 57.636 45.000 8.06 0.00 43.88 4.26
1313 1357 2.363788 TAAGACGAACTTGCATCGCT 57.636 45.000 8.06 4.16 43.88 4.93
1314 1358 3.153735 GTTTAAGACGAACTTGCATCGC 58.846 45.455 8.06 2.04 43.88 4.58
1315 1359 3.432252 AGGTTTAAGACGAACTTGCATCG 59.568 43.478 6.65 6.65 45.47 3.84
1316 1360 4.451096 TCAGGTTTAAGACGAACTTGCATC 59.549 41.667 9.13 0.00 39.38 3.91
1317 1361 4.385825 TCAGGTTTAAGACGAACTTGCAT 58.614 39.130 9.13 0.00 39.38 3.96
1318 1362 3.799366 TCAGGTTTAAGACGAACTTGCA 58.201 40.909 9.13 0.00 39.38 4.08
1319 1363 3.808174 ACTCAGGTTTAAGACGAACTTGC 59.192 43.478 9.13 0.00 39.38 4.01
1320 1364 4.448060 GGACTCAGGTTTAAGACGAACTTG 59.552 45.833 9.13 0.87 39.38 3.16
1321 1365 4.629092 GGACTCAGGTTTAAGACGAACTT 58.371 43.478 0.00 0.00 42.04 2.66
1322 1366 3.305199 CGGACTCAGGTTTAAGACGAACT 60.305 47.826 0.00 0.00 0.00 3.01
1323 1367 2.985139 CGGACTCAGGTTTAAGACGAAC 59.015 50.000 0.00 0.00 0.00 3.95
1324 1368 2.886523 TCGGACTCAGGTTTAAGACGAA 59.113 45.455 0.00 0.00 0.00 3.85
1325 1369 2.507484 TCGGACTCAGGTTTAAGACGA 58.493 47.619 0.00 0.00 0.00 4.20
1326 1370 3.293311 TTCGGACTCAGGTTTAAGACG 57.707 47.619 0.00 0.00 0.00 4.18
1327 1371 4.182339 GGATTCGGACTCAGGTTTAAGAC 58.818 47.826 0.00 0.00 0.00 3.01
1558 1622 8.761689 TCCTATTTAATTCCTTTAGTACGTGGT 58.238 33.333 0.00 0.00 0.00 4.16
1592 1656 2.486982 CACCTCCTTTGAATGTCTGCAG 59.513 50.000 7.63 7.63 0.00 4.41
1654 1718 8.901472 AATGACACCTCTATATTGATAGGCTA 57.099 34.615 0.00 0.00 36.45 3.93
1791 1855 3.885484 AGTCAGCACAAAGATTGTTCG 57.115 42.857 0.00 0.00 43.23 3.95
1971 2043 7.258022 TGATCACACAAATAATAATGTCCGG 57.742 36.000 0.00 0.00 0.00 5.14
2147 2221 6.073447 TCCTACAAATACACCATCCAATGT 57.927 37.500 0.00 0.00 0.00 2.71
2265 2339 4.405680 CCCACAAAAGGAAAGAGAAACCTT 59.594 41.667 0.00 0.00 44.53 3.50
2309 2383 9.541143 TTCCCTAAAACAACAATTTTCTGAATC 57.459 29.630 0.00 0.00 33.80 2.52
2610 2685 7.753132 TGAATCACTTTACCGAAAATATTGCAC 59.247 33.333 0.00 0.00 0.00 4.57
2641 2716 5.106830 CCACCCTAAGTAAACAATCGAACAC 60.107 44.000 0.00 0.00 0.00 3.32
2669 2744 2.534042 TGGTTCCCAAAGTGGTTCAA 57.466 45.000 0.00 0.00 35.17 2.69
2676 2751 3.976015 TGTCTTTCTTGGTTCCCAAAGT 58.024 40.909 0.00 0.00 43.44 2.66
2977 3071 2.890945 TGACGTCTCCACATTCTTCAGA 59.109 45.455 17.92 0.00 0.00 3.27
2978 3072 3.249091 CTGACGTCTCCACATTCTTCAG 58.751 50.000 17.92 0.00 0.00 3.02
2979 3073 2.029020 CCTGACGTCTCCACATTCTTCA 60.029 50.000 17.92 0.00 0.00 3.02
2994 3088 1.374758 GTGAGCCTTGTCCCTGACG 60.375 63.158 0.00 0.00 34.95 4.35
3050 3144 7.559590 ACATAATAAATGAGAGGCTCAACAC 57.440 36.000 18.26 5.74 44.04 3.32
3106 3200 5.050023 CAGCAATGAACATGCAACAATTTCA 60.050 36.000 0.00 0.00 46.22 2.69
3388 3482 2.734755 TAATCAATGACCCTGGCTGG 57.265 50.000 2.96 2.96 0.00 4.85
3450 3544 6.763715 AGCCTATCTGTACCCATTTGAATA 57.236 37.500 0.00 0.00 0.00 1.75
3532 3626 7.865706 ATTGAAATCTTATAACTGCCGAGTT 57.134 32.000 0.00 0.00 44.90 3.01
4111 4238 2.894765 TCAACCAATGACGACAGGTCTA 59.105 45.455 0.00 0.00 46.24 2.59
4219 8655 6.390721 TGAAATTTTCACGACAACCTTGAAA 58.609 32.000 7.74 0.00 37.44 2.69
4249 10574 4.142534 CGCACTGTCAATTCATTCCATTCT 60.143 41.667 0.00 0.00 0.00 2.40
4309 10635 2.981302 CATCGTCTGCCCTCACCA 59.019 61.111 0.00 0.00 0.00 4.17
4350 10676 5.474876 AGCAAAGAGAAAAATAGTGACAGGG 59.525 40.000 0.00 0.00 0.00 4.45
4351 10677 6.376978 CAGCAAAGAGAAAAATAGTGACAGG 58.623 40.000 0.00 0.00 0.00 4.00
4360 10686 7.496591 TGAAATTTCTGCAGCAAAGAGAAAAAT 59.503 29.630 18.64 3.64 38.77 1.82
4398 10724 4.202388 ACAAACCGTAACCCTATTCACTGT 60.202 41.667 0.00 0.00 0.00 3.55
4415 10741 3.316308 ACAAACATCTCAGCTCACAAACC 59.684 43.478 0.00 0.00 0.00 3.27
4424 10750 3.499918 AGCAACTACACAAACATCTCAGC 59.500 43.478 0.00 0.00 0.00 4.26
4722 11055 4.193826 TGGAGCATGAAACTACAGAGAC 57.806 45.455 0.00 0.00 0.00 3.36
4832 11165 1.878775 GTGACATGTGCAAGAGCCC 59.121 57.895 1.15 0.00 41.13 5.19
4852 11186 1.302832 GATAGGGCCGCATCTTGGG 60.303 63.158 12.37 0.00 0.00 4.12
4853 11187 1.302832 GGATAGGGCCGCATCTTGG 60.303 63.158 17.27 0.00 0.00 3.61
4854 11188 0.976641 TAGGATAGGGCCGCATCTTG 59.023 55.000 17.27 0.00 0.00 3.02
4855 11189 1.729586 TTAGGATAGGGCCGCATCTT 58.270 50.000 17.27 13.67 0.00 2.40
4856 11190 1.625818 CTTTAGGATAGGGCCGCATCT 59.374 52.381 17.27 8.83 0.00 2.90
4857 11191 1.339151 CCTTTAGGATAGGGCCGCATC 60.339 57.143 11.48 11.48 37.39 3.91
4858 11192 0.693049 CCTTTAGGATAGGGCCGCAT 59.307 55.000 0.00 0.00 37.39 4.73
4859 11193 0.399376 TCCTTTAGGATAGGGCCGCA 60.399 55.000 0.00 0.00 39.78 5.69
4860 11194 0.763035 TTCCTTTAGGATAGGGCCGC 59.237 55.000 0.00 0.00 44.98 6.53
4861 11195 2.037381 GAGTTCCTTTAGGATAGGGCCG 59.963 54.545 0.00 0.00 44.98 6.13
4862 11196 2.037381 CGAGTTCCTTTAGGATAGGGCC 59.963 54.545 0.00 0.00 44.98 5.80
4863 11197 2.963782 TCGAGTTCCTTTAGGATAGGGC 59.036 50.000 0.00 0.00 44.98 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.