Multiple sequence alignment - TraesCS1A01G245800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G245800 chr1A 100.000 4033 0 0 1 4033 435091004 435086972 0.000000e+00 7448.0
1 TraesCS1A01G245800 chr1A 83.521 801 100 23 1216 2008 49286827 49287603 0.000000e+00 719.0
2 TraesCS1A01G245800 chr1A 82.524 515 76 11 1950 2459 49287608 49288113 1.330000e-119 440.0
3 TraesCS1A01G245800 chr1A 87.591 137 14 1 2871 3007 49288211 49288344 5.400000e-34 156.0
4 TraesCS1A01G245800 chr1B 92.348 1699 99 23 792 2469 452508863 452507175 0.000000e+00 2388.0
5 TraesCS1A01G245800 chr1B 94.711 605 28 2 2534 3134 452507034 452506430 0.000000e+00 937.0
6 TraesCS1A01G245800 chr1B 84.693 797 94 8 4 781 452511496 452510709 0.000000e+00 771.0
7 TraesCS1A01G245800 chr1B 83.951 810 93 26 1209 2008 70328198 70328980 0.000000e+00 741.0
8 TraesCS1A01G245800 chr1B 83.951 567 54 20 3484 4016 452502247 452501684 3.600000e-140 508.0
9 TraesCS1A01G245800 chr1B 84.886 483 61 9 1984 2459 70329009 70329486 1.010000e-130 477.0
10 TraesCS1A01G245800 chr1B 91.630 227 12 4 3213 3432 452506431 452506205 1.410000e-79 307.0
11 TraesCS1A01G245800 chr1B 78.198 344 49 17 2670 3007 70329494 70329817 3.180000e-46 196.0
12 TraesCS1A01G245800 chr1B 77.656 273 41 12 467 722 183262406 183262675 9.030000e-32 148.0
13 TraesCS1A01G245800 chr1B 76.426 263 54 7 465 725 95651159 95650903 7.030000e-28 135.0
14 TraesCS1A01G245800 chr1B 84.706 85 11 1 3129 3211 510917861 510917945 2.580000e-12 84.2
15 TraesCS1A01G245800 chr1D 83.827 810 97 25 1208 2008 49941820 49942604 0.000000e+00 739.0
16 TraesCS1A01G245800 chr1D 84.746 472 61 8 1984 2450 49942634 49943099 2.840000e-126 462.0
17 TraesCS1A01G245800 chr1D 80.567 247 32 10 2762 3008 49943257 49943487 4.140000e-40 176.0
18 TraesCS1A01G245800 chr1D 75.120 209 37 9 538 734 438368150 438367945 2.580000e-12 84.2
19 TraesCS1A01G245800 chr2B 77.652 264 33 12 465 719 749307421 749307667 1.950000e-28 137.0
20 TraesCS1A01G245800 chr4A 76.259 278 31 23 487 734 514989372 514989644 9.160000e-22 115.0
21 TraesCS1A01G245800 chr6A 77.665 197 32 8 493 681 489509113 489508921 4.260000e-20 110.0
22 TraesCS1A01G245800 chr7A 75.424 236 40 12 467 699 609403904 609403684 9.220000e-17 99.0
23 TraesCS1A01G245800 chr7A 85.227 88 10 2 3127 3211 632521152 632521065 2.000000e-13 87.9
24 TraesCS1A01G245800 chr7A 84.884 86 10 3 3129 3211 197997848 197997933 2.580000e-12 84.2
25 TraesCS1A01G245800 chr7A 88.889 54 4 2 526 578 526287356 526287408 9.360000e-07 65.8
26 TraesCS1A01G245800 chr6B 80.142 141 19 6 467 601 568259989 568260126 3.320000e-16 97.1
27 TraesCS1A01G245800 chr7B 75.829 211 35 8 485 683 595529952 595530158 4.290000e-15 93.5
28 TraesCS1A01G245800 chr7B 82.222 90 12 4 638 726 213470057 213470143 1.550000e-09 75.0
29 TraesCS1A01G245800 chr5B 86.207 87 9 2 3128 3211 505573920 505573834 1.540000e-14 91.6
30 TraesCS1A01G245800 chr5B 84.783 92 11 2 3123 3211 47504113 47504204 5.550000e-14 89.8
31 TraesCS1A01G245800 chr3D 85.556 90 10 2 3125 3211 47613006 47612917 1.540000e-14 91.6
32 TraesCS1A01G245800 chr3D 73.455 275 47 12 468 734 384005543 384005799 3.340000e-11 80.5
33 TraesCS1A01G245800 chr3D 79.808 104 13 2 550 652 79598255 79598159 7.230000e-08 69.4
34 TraesCS1A01G245800 chr6D 83.908 87 11 3 3128 3211 84218367 84218453 3.340000e-11 80.5
35 TraesCS1A01G245800 chr6D 83.908 87 11 2 3128 3211 84218459 84218373 3.340000e-11 80.5
36 TraesCS1A01G245800 chr2D 83.908 87 10 4 3129 3211 99658120 99658206 3.340000e-11 80.5
37 TraesCS1A01G245800 chr5D 87.273 55 7 0 3737 3791 357368839 357368893 3.370000e-06 63.9
38 TraesCS1A01G245800 chr3A 86.207 58 6 2 523 578 689135716 689135773 1.210000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G245800 chr1A 435086972 435091004 4032 True 7448.000000 7448 100.000000 1 4033 1 chr1A.!!$R1 4032
1 TraesCS1A01G245800 chr1A 49286827 49288344 1517 False 438.333333 719 84.545333 1216 3007 3 chr1A.!!$F1 1791
2 TraesCS1A01G245800 chr1B 452501684 452511496 9812 True 982.200000 2388 89.466600 4 4016 5 chr1B.!!$R2 4012
3 TraesCS1A01G245800 chr1B 70328198 70329817 1619 False 471.333333 741 82.345000 1209 3007 3 chr1B.!!$F3 1798
4 TraesCS1A01G245800 chr1D 49941820 49943487 1667 False 459.000000 739 83.046667 1208 3008 3 chr1D.!!$F1 1800

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
775 795 0.168788 TTCCGACACGTTACCGCTAG 59.831 55.0 0.0 0.0 37.70 3.42 F
2081 4012 0.304705 GCGAGGGCGTTGAATACATG 59.695 55.0 0.0 0.0 40.36 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2524 4564 0.036388 CGCTAAGAAGCCCCAGTCAA 60.036 55.0 0.0 0.0 46.68 3.18 R
3796 9842 0.252057 TCATCCCCTTGTCTGGTCGA 60.252 55.0 0.0 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.045242 CTGGCTGGCTGCTGATGT 60.045 61.111 16.14 0.00 42.39 3.06
65 66 2.508663 GGCACGCCTTACTCGGTC 60.509 66.667 0.00 0.00 0.00 4.79
67 68 2.092882 GCACGCCTTACTCGGTCAC 61.093 63.158 0.00 0.00 0.00 3.67
79 80 2.977456 GGTCACGCATGCACACCA 60.977 61.111 19.57 0.00 0.00 4.17
149 160 2.825836 GCATGGGGAAGAGCGTGG 60.826 66.667 0.00 0.00 0.00 4.94
150 161 2.825836 CATGGGGAAGAGCGTGGC 60.826 66.667 0.00 0.00 0.00 5.01
182 193 1.069935 GAGATAAGTGGGAGGCGGC 59.930 63.158 0.00 0.00 0.00 6.53
185 196 2.100879 GATAAGTGGGAGGCGGCGAT 62.101 60.000 12.98 0.00 0.00 4.58
199 210 1.210155 GCGATGACAAGTGGTTGGC 59.790 57.895 0.00 0.00 42.81 4.52
205 216 3.726517 CAAGTGGTTGGCGAGGCG 61.727 66.667 0.00 0.00 0.00 5.52
289 300 1.988107 AGCAGAGGGGAATCAGTGAAA 59.012 47.619 0.00 0.00 0.00 2.69
290 301 2.376518 AGCAGAGGGGAATCAGTGAAAA 59.623 45.455 0.00 0.00 0.00 2.29
300 311 2.550830 TCAGTGAAAAGGCAGAGACC 57.449 50.000 0.00 0.00 0.00 3.85
301 312 1.768275 TCAGTGAAAAGGCAGAGACCA 59.232 47.619 0.00 0.00 0.00 4.02
305 316 2.485814 GTGAAAAGGCAGAGACCATGAC 59.514 50.000 0.00 0.00 0.00 3.06
308 319 1.903877 AAGGCAGAGACCATGACCGG 61.904 60.000 0.00 0.00 0.00 5.28
311 322 3.461773 AGAGACCATGACCGGGCG 61.462 66.667 6.32 0.00 40.05 6.13
312 323 3.771160 GAGACCATGACCGGGCGT 61.771 66.667 6.32 0.00 40.05 5.68
326 337 2.508663 GCGTCGGGAACACTAGGC 60.509 66.667 0.00 0.00 0.00 3.93
333 344 1.679898 GGAACACTAGGCAGCCTGT 59.320 57.895 25.59 16.67 34.61 4.00
335 346 1.160137 GAACACTAGGCAGCCTGTTG 58.840 55.000 25.59 21.44 34.61 3.33
375 386 0.914644 CAGCCCATCTCCTCCTCAAA 59.085 55.000 0.00 0.00 0.00 2.69
388 399 3.944015 CCTCCTCAAACCTTTATGAGCAG 59.056 47.826 0.00 0.00 41.36 4.24
392 403 2.489329 TCAAACCTTTATGAGCAGCAGC 59.511 45.455 0.00 0.00 42.56 5.25
398 409 2.133281 TTATGAGCAGCAGCCAATGT 57.867 45.000 0.00 0.00 43.56 2.71
402 413 0.316204 GAGCAGCAGCCAATGTGTTT 59.684 50.000 0.00 0.00 43.56 2.83
420 431 6.336566 TGTGTTTGCTGAAATTTGCTAGAAA 58.663 32.000 0.00 0.00 0.00 2.52
425 436 7.878477 TTGCTGAAATTTGCTAGAAATCTTG 57.122 32.000 0.00 0.00 0.00 3.02
426 437 5.865552 TGCTGAAATTTGCTAGAAATCTTGC 59.134 36.000 9.47 9.47 43.36 4.01
431 442 3.722555 TTGCTAGAAATCTTGCGTTCG 57.277 42.857 11.25 0.00 45.42 3.95
440 451 4.882671 AATCTTGCGTTCGCTGAATAAT 57.117 36.364 17.63 1.61 0.00 1.28
445 456 6.781138 TCTTGCGTTCGCTGAATAATATTTT 58.219 32.000 17.63 0.00 0.00 1.82
446 457 7.247728 TCTTGCGTTCGCTGAATAATATTTTT 58.752 30.769 17.63 0.00 0.00 1.94
482 493 3.060479 TCCAACTATACCTGGCCATCT 57.940 47.619 5.51 0.00 32.33 2.90
560 572 1.664151 GGCGTCGGACCTAAAAATCAG 59.336 52.381 1.91 0.00 0.00 2.90
579 591 4.847367 CCCAAGCCTGGCCCATCC 62.847 72.222 16.57 0.00 41.99 3.51
587 599 3.643595 CTGGCCCATCCCTGCGAAA 62.644 63.158 0.00 0.00 0.00 3.46
602 614 2.930562 AAAGCCTGCCGGACCTCT 60.931 61.111 5.05 0.00 0.00 3.69
603 615 1.612442 AAAGCCTGCCGGACCTCTA 60.612 57.895 5.05 0.00 0.00 2.43
607 619 2.790791 CCTGCCGGACCTCTAGCTG 61.791 68.421 5.05 0.00 0.00 4.24
616 628 0.689412 ACCTCTAGCTGGGCCTCTTC 60.689 60.000 4.53 0.00 0.00 2.87
625 637 2.363359 GCTGGGCCTCTTCATTAAATGG 59.637 50.000 4.53 0.00 0.00 3.16
630 642 4.141642 GGGCCTCTTCATTAAATGGCAAAT 60.142 41.667 0.84 0.00 37.82 2.32
641 653 3.443588 GGCAAATATGGCGGGTCC 58.556 61.111 0.00 0.00 42.73 4.46
642 654 2.551912 GGCAAATATGGCGGGTCCG 61.552 63.158 4.85 4.85 42.73 4.79
643 655 2.551912 GCAAATATGGCGGGTCCGG 61.552 63.158 11.60 0.00 40.19 5.14
675 687 0.328258 GCTCAAAACCTAGGCCCAGA 59.672 55.000 9.30 1.38 0.00 3.86
775 795 0.168788 TTCCGACACGTTACCGCTAG 59.831 55.000 0.00 0.00 37.70 3.42
834 2689 0.889306 CTCGATTCCTACCGATCCCC 59.111 60.000 0.00 0.00 34.08 4.81
835 2690 0.481567 TCGATTCCTACCGATCCCCT 59.518 55.000 0.00 0.00 0.00 4.79
837 2692 1.272769 CGATTCCTACCGATCCCCTTC 59.727 57.143 0.00 0.00 0.00 3.46
838 2693 1.624312 GATTCCTACCGATCCCCTTCC 59.376 57.143 0.00 0.00 0.00 3.46
1015 2879 1.002134 CCCATGGCTTCTGTTCCGT 60.002 57.895 6.09 0.00 0.00 4.69
1022 2886 0.318762 GCTTCTGTTCCGTCACTCCT 59.681 55.000 0.00 0.00 0.00 3.69
1077 2941 2.982488 AGAGGGTGTTCAGGAAGTTCAT 59.018 45.455 5.01 0.00 0.00 2.57
1128 2992 8.926715 ATGTGAAAAAGAGAAAACAAAGGTAC 57.073 30.769 0.00 0.00 0.00 3.34
1292 3156 2.863137 GCAGACTCCAGATGAATTCGAC 59.137 50.000 0.04 0.00 0.00 4.20
1364 3228 2.035321 GGAATTTTGGTTCGACCTTGCA 59.965 45.455 5.77 0.00 39.58 4.08
1391 3255 1.727335 GAGAAAGCACGTTCAGTAGCC 59.273 52.381 0.00 0.00 0.00 3.93
1423 3287 7.507733 AATGTCTGCTGAATAAGGATCATTC 57.492 36.000 0.00 0.00 30.72 2.67
1437 3301 7.642082 AAGGATCATTCTTTTGAGATTCTGG 57.358 36.000 0.00 0.00 0.00 3.86
1441 3305 7.121759 GGATCATTCTTTTGAGATTCTGGTTCA 59.878 37.037 0.00 0.00 0.00 3.18
1443 3307 8.413309 TCATTCTTTTGAGATTCTGGTTCAAT 57.587 30.769 0.00 0.00 31.54 2.57
1444 3308 9.519191 TCATTCTTTTGAGATTCTGGTTCAATA 57.481 29.630 0.00 0.00 31.54 1.90
1449 3313 6.925610 TTGAGATTCTGGTTCAATAATCCG 57.074 37.500 0.00 0.00 0.00 4.18
1450 3314 4.816385 TGAGATTCTGGTTCAATAATCCGC 59.184 41.667 0.00 0.00 0.00 5.54
1479 3345 8.307483 TGATAGGAAGTTACTGTTCTGAAGAAG 58.693 37.037 0.00 0.00 34.27 2.85
1484 3350 8.674607 GGAAGTTACTGTTCTGAAGAAGAAAAA 58.325 33.333 6.95 0.00 46.51 1.94
1487 3353 5.836821 ACTGTTCTGAAGAAGAAAAACCC 57.163 39.130 6.95 0.00 46.51 4.11
1488 3354 5.261216 ACTGTTCTGAAGAAGAAAAACCCA 58.739 37.500 6.95 0.00 46.51 4.51
1495 3361 8.078060 TCTGAAGAAGAAAAACCCAGAAAATT 57.922 30.769 0.00 0.00 29.54 1.82
1500 3366 8.722480 AGAAGAAAAACCCAGAAAATTTTCAG 57.278 30.769 28.00 21.39 41.77 3.02
1504 3370 8.321353 AGAAAAACCCAGAAAATTTTCAGTTCT 58.679 29.630 28.00 20.51 41.77 3.01
1555 3423 9.997482 CTACTTTGTAGTTAAGTTTTGCTGAAA 57.003 29.630 0.00 0.00 37.12 2.69
1579 3447 9.581099 AAATTTTCTTTAGTTCAAACATGTCGT 57.419 25.926 0.00 0.00 0.00 4.34
1580 3448 7.962934 TTTTCTTTAGTTCAAACATGTCGTG 57.037 32.000 0.00 0.39 0.00 4.35
1588 3456 3.626977 TCAAACATGTCGTGTGAATTGC 58.373 40.909 0.00 0.00 39.01 3.56
1594 3462 3.326836 TGTCGTGTGAATTGCCATCTA 57.673 42.857 0.00 0.00 0.00 1.98
1596 3464 4.260985 TGTCGTGTGAATTGCCATCTAAT 58.739 39.130 0.00 0.00 0.00 1.73
1597 3465 5.423886 TGTCGTGTGAATTGCCATCTAATA 58.576 37.500 0.00 0.00 0.00 0.98
1598 3466 5.293324 TGTCGTGTGAATTGCCATCTAATAC 59.707 40.000 0.00 0.00 0.00 1.89
1599 3467 5.293324 GTCGTGTGAATTGCCATCTAATACA 59.707 40.000 0.00 0.00 0.00 2.29
1601 3469 6.542005 TCGTGTGAATTGCCATCTAATACAAT 59.458 34.615 0.00 0.00 34.30 2.71
1602 3470 7.066887 TCGTGTGAATTGCCATCTAATACAATT 59.933 33.333 0.00 0.00 43.45 2.32
1603 3471 7.166307 CGTGTGAATTGCCATCTAATACAATTG 59.834 37.037 3.24 3.24 41.48 2.32
1604 3472 7.975616 GTGTGAATTGCCATCTAATACAATTGT 59.024 33.333 16.68 16.68 41.48 2.71
1608 3478 7.902920 ATTGCCATCTAATACAATTGTCCTT 57.097 32.000 15.85 12.37 28.54 3.36
1710 3580 5.009010 CCTTGAAAATGAATATGGGAGTCCG 59.991 44.000 2.26 0.00 35.24 4.79
1725 3595 1.077089 GTCCGCGAGAGGTAAGTTGC 61.077 60.000 8.23 0.00 0.00 4.17
1749 3619 6.088085 GCAACTTGCAAATGACACTACATTAC 59.912 38.462 14.33 0.00 44.26 1.89
1754 3624 6.730175 TGCAAATGACACTACATTACGTTTT 58.270 32.000 0.00 0.00 39.19 2.43
1761 3631 8.428186 TGACACTACATTACGTTTTCTTCTTT 57.572 30.769 0.00 0.00 0.00 2.52
1825 3695 5.041191 AGGATGCCGTCAAGAAGATATTT 57.959 39.130 0.00 0.00 0.00 1.40
1835 3705 6.481984 GTCAAGAAGATATTTCAAAGAGCCG 58.518 40.000 0.00 0.00 0.00 5.52
1999 3930 7.517614 TTGTTGTCTGTATTTGGAGCAAATA 57.482 32.000 0.00 0.00 41.50 1.40
2035 3966 3.270027 CGCAATTGTAGATCTGGTTCCA 58.730 45.455 5.18 0.00 0.00 3.53
2081 4012 0.304705 GCGAGGGCGTTGAATACATG 59.695 55.000 0.00 0.00 40.36 3.21
2097 4028 8.373048 TGAATACATGAACTTTGTCGTAAACT 57.627 30.769 0.00 0.00 0.00 2.66
2102 4033 1.292061 ACTTTGTCGTAAACTGCGCA 58.708 45.000 10.98 10.98 0.00 6.09
2171 4102 2.284190 GCTATCCTGGAGTTCAAGTGC 58.716 52.381 1.52 0.00 0.00 4.40
2238 4169 4.578105 GGGATCATCCAACAAGAACAGATC 59.422 45.833 5.89 0.00 38.64 2.75
2327 4263 6.201997 CCCGAAAACCTTTTCAATTTAACTGG 59.798 38.462 10.38 1.50 45.15 4.00
2464 4400 6.360370 TCTTTGTGTATCCTGCTCTTACTT 57.640 37.500 0.00 0.00 0.00 2.24
2465 4401 7.476540 TCTTTGTGTATCCTGCTCTTACTTA 57.523 36.000 0.00 0.00 0.00 2.24
2466 4402 7.321153 TCTTTGTGTATCCTGCTCTTACTTAC 58.679 38.462 0.00 0.00 0.00 2.34
2467 4403 6.852420 TTGTGTATCCTGCTCTTACTTACT 57.148 37.500 0.00 0.00 0.00 2.24
2468 4404 7.949690 TTGTGTATCCTGCTCTTACTTACTA 57.050 36.000 0.00 0.00 0.00 1.82
2469 4405 8.534954 TTGTGTATCCTGCTCTTACTTACTAT 57.465 34.615 0.00 0.00 0.00 2.12
2499 4539 9.674824 CTCAATCAGATCTATTTTTGTAATGCC 57.325 33.333 0.00 0.00 0.00 4.40
2511 4551 6.892658 TTTTGTAATGCCTCTTGCTTCTTA 57.107 33.333 0.00 0.00 42.00 2.10
2512 4552 6.500684 TTTGTAATGCCTCTTGCTTCTTAG 57.499 37.500 0.00 0.00 42.00 2.18
2554 4594 2.789893 GCTTCTTAGCGTACTTGATCCG 59.210 50.000 0.00 0.00 37.71 4.18
2570 4610 6.210584 ACTTGATCCGTATTTCACCCATTTTT 59.789 34.615 0.00 0.00 0.00 1.94
2616 4656 9.712305 TGGAGCTTAAATTGTATAGCTAAGATC 57.288 33.333 0.00 0.00 43.57 2.75
2617 4657 9.712305 GGAGCTTAAATTGTATAGCTAAGATCA 57.288 33.333 0.00 0.00 43.57 2.92
2623 4663 7.736447 AATTGTATAGCTAAGATCACAAGGC 57.264 36.000 0.00 0.00 30.23 4.35
2631 4671 6.183347 AGCTAAGATCACAAGGCTGTAATTT 58.817 36.000 0.00 0.00 33.22 1.82
2654 4694 5.514274 AGTGTATGGTTCAGTTTGTTTGG 57.486 39.130 0.00 0.00 0.00 3.28
2655 4695 4.048504 GTGTATGGTTCAGTTTGTTTGGC 58.951 43.478 0.00 0.00 0.00 4.52
2678 4718 1.160137 GCTCAAGCGTGAACTCCATT 58.840 50.000 3.39 0.00 31.88 3.16
2990 5089 5.762711 TGAAGAAAGAATCGACCATGTGAAA 59.237 36.000 0.00 0.00 0.00 2.69
3034 5136 1.153647 TGCCCTACGAAGCATGACG 60.154 57.895 0.00 0.99 33.08 4.35
3035 5137 2.526120 GCCCTACGAAGCATGACGC 61.526 63.158 0.00 0.00 42.91 5.19
3061 5163 9.403110 CTCACTTAATGTCAAAGAAAATTCCTG 57.597 33.333 0.00 0.00 0.00 3.86
3062 5164 8.912988 TCACTTAATGTCAAAGAAAATTCCTGT 58.087 29.630 0.00 0.00 0.00 4.00
3077 5179 0.813184 CCTGTGAAATGCATTCGCCT 59.187 50.000 13.38 0.00 45.94 5.52
3078 5180 2.016318 CCTGTGAAATGCATTCGCCTA 58.984 47.619 13.38 0.00 45.94 3.93
3094 5196 7.255139 GCATTCGCCTATGGAATAGTAAAACTT 60.255 37.037 0.00 0.00 45.54 2.66
3119 5221 9.662947 TTTTAGGTTAGCTCAGTACTTTATTCC 57.337 33.333 0.00 0.00 0.00 3.01
3136 5238 9.286170 ACTTTATTCCTTTGAGAAAACTACTCC 57.714 33.333 0.00 0.00 33.95 3.85
3137 5239 8.631480 TTTATTCCTTTGAGAAAACTACTCCC 57.369 34.615 0.00 0.00 33.95 4.30
3138 5240 5.906772 TTCCTTTGAGAAAACTACTCCCT 57.093 39.130 0.00 0.00 33.95 4.20
3139 5241 5.485209 TCCTTTGAGAAAACTACTCCCTC 57.515 43.478 0.00 0.00 33.95 4.30
3140 5242 4.286291 TCCTTTGAGAAAACTACTCCCTCC 59.714 45.833 0.00 0.00 33.95 4.30
3141 5243 3.955650 TTGAGAAAACTACTCCCTCCG 57.044 47.619 0.00 0.00 33.95 4.63
3142 5244 2.885616 TGAGAAAACTACTCCCTCCGT 58.114 47.619 0.00 0.00 33.95 4.69
3143 5245 2.824341 TGAGAAAACTACTCCCTCCGTC 59.176 50.000 0.00 0.00 33.95 4.79
3144 5246 3.090790 GAGAAAACTACTCCCTCCGTCT 58.909 50.000 0.00 0.00 0.00 4.18
3145 5247 3.090790 AGAAAACTACTCCCTCCGTCTC 58.909 50.000 0.00 0.00 0.00 3.36
3146 5248 2.599408 AAACTACTCCCTCCGTCTCA 57.401 50.000 0.00 0.00 0.00 3.27
3147 5249 2.830651 AACTACTCCCTCCGTCTCAT 57.169 50.000 0.00 0.00 0.00 2.90
3148 5250 3.947612 AACTACTCCCTCCGTCTCATA 57.052 47.619 0.00 0.00 0.00 2.15
3149 5251 3.947612 ACTACTCCCTCCGTCTCATAA 57.052 47.619 0.00 0.00 0.00 1.90
3150 5252 4.456662 ACTACTCCCTCCGTCTCATAAT 57.543 45.455 0.00 0.00 0.00 1.28
3151 5253 4.145807 ACTACTCCCTCCGTCTCATAATG 58.854 47.826 0.00 0.00 0.00 1.90
3152 5254 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
3153 5255 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
3154 5256 4.543689 ACTCCCTCCGTCTCATAATGTAA 58.456 43.478 0.00 0.00 0.00 2.41
3155 5257 4.585162 ACTCCCTCCGTCTCATAATGTAAG 59.415 45.833 0.00 0.00 0.00 2.34
3156 5258 3.895656 TCCCTCCGTCTCATAATGTAAGG 59.104 47.826 0.00 0.00 0.00 2.69
3157 5259 3.641906 CCCTCCGTCTCATAATGTAAGGT 59.358 47.826 0.00 0.00 0.00 3.50
3158 5260 4.101119 CCCTCCGTCTCATAATGTAAGGTT 59.899 45.833 0.00 0.00 0.00 3.50
3159 5261 5.396436 CCCTCCGTCTCATAATGTAAGGTTT 60.396 44.000 0.00 0.00 0.00 3.27
3160 5262 6.113411 CCTCCGTCTCATAATGTAAGGTTTT 58.887 40.000 0.00 0.00 0.00 2.43
3161 5263 6.598064 CCTCCGTCTCATAATGTAAGGTTTTT 59.402 38.462 0.00 0.00 0.00 1.94
3208 5310 3.939592 GTCTTAGATTTTGGGACGAAGGG 59.060 47.826 0.00 0.00 0.00 3.95
3209 5311 3.841845 TCTTAGATTTTGGGACGAAGGGA 59.158 43.478 0.00 0.00 0.00 4.20
3210 5312 2.789409 AGATTTTGGGACGAAGGGAG 57.211 50.000 0.00 0.00 0.00 4.30
3211 5313 2.266279 AGATTTTGGGACGAAGGGAGA 58.734 47.619 0.00 0.00 0.00 3.71
3212 5314 2.642807 AGATTTTGGGACGAAGGGAGAA 59.357 45.455 0.00 0.00 0.00 2.87
3213 5315 2.265589 TTTTGGGACGAAGGGAGAAC 57.734 50.000 0.00 0.00 0.00 3.01
3248 5350 1.338020 CTTTTGAAGGGTCCTGTGTGC 59.662 52.381 0.00 0.00 0.00 4.57
3249 5351 0.257328 TTTGAAGGGTCCTGTGTGCA 59.743 50.000 0.00 0.00 0.00 4.57
3252 5354 0.250901 GAAGGGTCCTGTGTGCATGT 60.251 55.000 0.00 0.00 0.00 3.21
3253 5355 0.250901 AAGGGTCCTGTGTGCATGTC 60.251 55.000 0.00 0.00 0.00 3.06
3255 5357 0.613260 GGGTCCTGTGTGCATGTCTA 59.387 55.000 0.00 0.00 0.00 2.59
3256 5358 1.406069 GGGTCCTGTGTGCATGTCTAG 60.406 57.143 0.00 0.00 0.00 2.43
3257 5359 1.276421 GGTCCTGTGTGCATGTCTAGT 59.724 52.381 0.00 0.00 0.00 2.57
3258 5360 2.289694 GGTCCTGTGTGCATGTCTAGTT 60.290 50.000 0.00 0.00 0.00 2.24
3259 5361 2.996621 GTCCTGTGTGCATGTCTAGTTC 59.003 50.000 0.00 0.00 0.00 3.01
3260 5362 2.899900 TCCTGTGTGCATGTCTAGTTCT 59.100 45.455 0.00 0.00 0.00 3.01
3261 5363 3.056536 TCCTGTGTGCATGTCTAGTTCTC 60.057 47.826 0.00 0.00 0.00 2.87
3264 5366 5.060662 TGTGTGCATGTCTAGTTCTCTAC 57.939 43.478 0.00 0.00 0.00 2.59
3272 5381 6.548321 CATGTCTAGTTCTCTACCCCTATCT 58.452 44.000 0.00 0.00 0.00 1.98
3337 5446 7.662669 TGGTTAACTAACTTATTGTTGACCCTC 59.337 37.037 13.70 0.00 44.50 4.30
3372 5481 9.883142 TTGACCATCTTGTTTTCTTTTTGTATT 57.117 25.926 0.00 0.00 0.00 1.89
3397 5506 9.506018 TTGAGACATGAATCTTTCTTAATGACA 57.494 29.630 0.00 0.00 0.00 3.58
3446 9298 2.154462 CAGATGCCGAGACAAGGTTTT 58.846 47.619 0.00 0.00 0.00 2.43
3459 9311 5.355910 AGACAAGGTTTTCTTTAGCGTTCAA 59.644 36.000 0.00 0.00 32.41 2.69
3469 9321 5.596845 TCTTTAGCGTTCAATTTGCCTTTT 58.403 33.333 0.00 0.00 0.00 2.27
3504 9519 0.322726 TGATGGCATGGTGGTGTCTG 60.323 55.000 3.81 0.00 0.00 3.51
3505 9520 0.322816 GATGGCATGGTGGTGTCTGT 60.323 55.000 3.81 0.00 0.00 3.41
3534 9549 7.485913 GTCATGTCATTACAAAGGTGCTTATTG 59.514 37.037 0.00 0.00 39.58 1.90
3539 9554 2.525368 ACAAAGGTGCTTATTGGGTCC 58.475 47.619 0.00 0.00 0.00 4.46
3547 9562 4.694037 GGTGCTTATTGGGTCCGAATATAC 59.306 45.833 7.12 7.19 0.00 1.47
3559 9574 4.215613 GTCCGAATATACCCAAAATGGCTC 59.784 45.833 0.00 0.00 35.79 4.70
3612 9628 1.205893 ACAAACCCGCACAAACAACAT 59.794 42.857 0.00 0.00 0.00 2.71
3622 9638 3.842820 CACAAACAACATGACACCACAA 58.157 40.909 0.00 0.00 0.00 3.33
3624 9640 3.186119 CAAACAACATGACACCACAACC 58.814 45.455 0.00 0.00 0.00 3.77
3628 9644 0.817634 ACATGACACCACAACCCACG 60.818 55.000 0.00 0.00 0.00 4.94
3649 9665 2.513753 CACCCAAGGCAAGATACAACA 58.486 47.619 0.00 0.00 0.00 3.33
3650 9666 2.489329 CACCCAAGGCAAGATACAACAG 59.511 50.000 0.00 0.00 0.00 3.16
3661 9677 6.109359 GCAAGATACAACAGTGTAGAGGAAT 58.891 40.000 0.00 0.00 43.42 3.01
3664 9680 3.059352 ACAACAGTGTAGAGGAATGGC 57.941 47.619 0.00 0.00 35.72 4.40
3696 9712 1.135053 GCTTGACGAACTAGGACTCCC 60.135 57.143 0.00 0.00 0.00 4.30
3699 9715 1.353358 TGACGAACTAGGACTCCCAGA 59.647 52.381 0.00 0.00 33.88 3.86
3702 9718 1.678123 CGAACTAGGACTCCCAGACGA 60.678 57.143 0.00 0.00 33.88 4.20
3703 9719 1.744522 GAACTAGGACTCCCAGACGAC 59.255 57.143 0.00 0.00 33.88 4.34
3713 9729 1.738099 CCAGACGACGCCTTCAAGG 60.738 63.158 0.00 0.00 38.80 3.61
3714 9730 1.738099 CAGACGACGCCTTCAAGGG 60.738 63.158 5.33 0.00 35.37 3.95
3722 9738 1.072505 GCCTTCAAGGGGAACGACA 59.927 57.895 5.33 0.00 35.37 4.35
3723 9739 1.235281 GCCTTCAAGGGGAACGACAC 61.235 60.000 5.33 0.00 35.37 3.67
3724 9740 0.949105 CCTTCAAGGGGAACGACACG 60.949 60.000 0.00 0.00 0.00 4.49
3725 9741 0.949105 CTTCAAGGGGAACGACACGG 60.949 60.000 0.00 0.00 0.00 4.94
3726 9742 2.358247 CAAGGGGAACGACACGGG 60.358 66.667 0.00 0.00 0.00 5.28
3727 9743 2.845795 AAGGGGAACGACACGGGT 60.846 61.111 0.00 0.00 0.00 5.28
3738 9754 4.012895 CACGGGTGTGCTCAACGC 62.013 66.667 12.28 3.29 39.67 4.84
3741 9757 2.742372 GGGTGTGCTCAACGCGAT 60.742 61.111 15.93 0.00 43.27 4.58
3743 9759 2.027073 GGTGTGCTCAACGCGATGA 61.027 57.895 18.45 18.45 43.27 2.92
3745 9761 2.371923 TGTGCTCAACGCGATGACG 61.372 57.895 15.63 12.29 43.27 4.35
3761 9807 4.022762 CGATGACGTCTTCAGGAAGGATAT 60.023 45.833 25.61 4.34 37.77 1.63
3777 9823 1.000163 GATATGACATCCACGGACGCT 60.000 52.381 0.00 0.00 0.00 5.07
3837 9884 1.135286 CCTTGAAGCAAAATCCGCCTC 60.135 52.381 0.00 0.00 0.00 4.70
3839 9886 0.251121 TGAAGCAAAATCCGCCTCCA 60.251 50.000 0.00 0.00 0.00 3.86
3890 9937 3.186047 CGCACCACCCGATCGAAC 61.186 66.667 18.66 0.00 0.00 3.95
3936 9983 1.153369 CACGACTATGGTGGCCAGG 60.153 63.158 5.11 0.00 36.75 4.45
3982 10030 3.591254 GAGCACCACGTCTCCCACC 62.591 68.421 0.00 0.00 0.00 4.61
3984 10032 3.068881 CACCACGTCTCCCACCAT 58.931 61.111 0.00 0.00 0.00 3.55
3986 10034 2.184322 CCACGTCTCCCACCATCG 59.816 66.667 0.00 0.00 0.00 3.84
3987 10035 2.348104 CCACGTCTCCCACCATCGA 61.348 63.158 0.00 0.00 0.00 3.59
3988 10036 1.139734 CACGTCTCCCACCATCGAG 59.860 63.158 0.00 0.00 0.00 4.04
3992 10040 3.866582 CTCCCACCATCGAGGCCC 61.867 72.222 0.00 0.00 43.14 5.80
4016 10064 1.003718 CCGGAGTTTGAGACCACCC 60.004 63.158 0.00 0.00 0.00 4.61
4017 10065 1.003718 CGGAGTTTGAGACCACCCC 60.004 63.158 0.00 0.00 0.00 4.95
4018 10066 1.764571 CGGAGTTTGAGACCACCCCA 61.765 60.000 0.00 0.00 0.00 4.96
4019 10067 0.250770 GGAGTTTGAGACCACCCCAC 60.251 60.000 0.00 0.00 0.00 4.61
4020 10068 0.250770 GAGTTTGAGACCACCCCACC 60.251 60.000 0.00 0.00 0.00 4.61
4021 10069 0.697854 AGTTTGAGACCACCCCACCT 60.698 55.000 0.00 0.00 0.00 4.00
4022 10070 0.250770 GTTTGAGACCACCCCACCTC 60.251 60.000 0.00 0.00 0.00 3.85
4023 10071 1.423794 TTTGAGACCACCCCACCTCC 61.424 60.000 0.00 0.00 0.00 4.30
4024 10072 3.391382 GAGACCACCCCACCTCCG 61.391 72.222 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.508663 GACCGAGTAAGGCGTGCC 60.509 66.667 1.67 1.67 33.69 5.01
57 58 1.445410 GTGCATGCGTGACCGAGTA 60.445 57.895 14.09 0.00 35.63 2.59
61 62 4.088762 GGTGTGCATGCGTGACCG 62.089 66.667 14.09 0.00 37.07 4.79
65 66 4.388080 CCGTGGTGTGCATGCGTG 62.388 66.667 14.09 0.09 0.00 5.34
67 68 4.088762 GTCCGTGGTGTGCATGCG 62.089 66.667 14.09 0.00 0.00 4.73
94 105 3.497115 TTCCACTGCACCCAGCCA 61.497 61.111 0.00 0.00 43.02 4.75
124 135 1.451927 CTTCCCCATGCGCTGCTTA 60.452 57.895 9.73 0.00 0.00 3.09
132 143 2.825836 CCACGCTCTTCCCCATGC 60.826 66.667 0.00 0.00 0.00 4.06
134 145 3.329889 TGCCACGCTCTTCCCCAT 61.330 61.111 0.00 0.00 0.00 4.00
136 147 4.785453 CCTGCCACGCTCTTCCCC 62.785 72.222 0.00 0.00 0.00 4.81
163 174 1.749033 CCGCCTCCCACTTATCTCC 59.251 63.158 0.00 0.00 0.00 3.71
168 179 2.762459 ATCGCCGCCTCCCACTTA 60.762 61.111 0.00 0.00 0.00 2.24
182 193 0.948623 TCGCCAACCACTTGTCATCG 60.949 55.000 0.00 0.00 0.00 3.84
185 196 1.227823 CCTCGCCAACCACTTGTCA 60.228 57.895 0.00 0.00 0.00 3.58
205 216 4.748144 CCTGCCCCCTTGGTCTGC 62.748 72.222 0.00 0.00 36.04 4.26
206 217 4.748144 GCCTGCCCCCTTGGTCTG 62.748 72.222 0.00 0.00 36.04 3.51
236 247 0.965866 TCCTGATCTGAACTCGCCGT 60.966 55.000 0.38 0.00 0.00 5.68
246 257 0.467106 TCTCCGGCTCTCCTGATCTG 60.467 60.000 0.00 0.00 0.00 2.90
289 300 1.599047 CGGTCATGGTCTCTGCCTT 59.401 57.895 0.00 0.00 0.00 4.35
290 301 2.362369 CCGGTCATGGTCTCTGCCT 61.362 63.158 0.00 0.00 0.00 4.75
308 319 2.183555 CCTAGTGTTCCCGACGCC 59.816 66.667 0.00 0.00 39.64 5.68
311 322 1.448013 GCTGCCTAGTGTTCCCGAC 60.448 63.158 0.00 0.00 0.00 4.79
312 323 2.656069 GGCTGCCTAGTGTTCCCGA 61.656 63.158 12.43 0.00 0.00 5.14
316 327 1.160137 CAACAGGCTGCCTAGTGTTC 58.840 55.000 22.90 0.00 29.64 3.18
351 362 2.765807 AGGAGATGGGCTGGACGG 60.766 66.667 0.00 0.00 0.00 4.79
358 369 0.106967 GGTTTGAGGAGGAGATGGGC 60.107 60.000 0.00 0.00 0.00 5.36
375 386 0.329261 TGGCTGCTGCTCATAAAGGT 59.671 50.000 15.64 0.00 39.59 3.50
388 399 0.032403 TCAGCAAACACATTGGCTGC 59.968 50.000 10.92 0.00 40.21 5.25
392 403 4.273969 AGCAAATTTCAGCAAACACATTGG 59.726 37.500 3.62 0.00 39.54 3.16
398 409 7.436118 AGATTTCTAGCAAATTTCAGCAAACA 58.564 30.769 3.62 0.00 0.00 2.83
402 413 5.865552 GCAAGATTTCTAGCAAATTTCAGCA 59.134 36.000 3.62 0.00 0.00 4.41
420 431 6.545504 AATATTATTCAGCGAACGCAAGAT 57.454 33.333 20.66 12.56 44.88 2.40
425 436 8.934973 ATAGAAAAATATTATTCAGCGAACGC 57.065 30.769 11.31 11.31 42.33 4.84
461 472 3.584848 GAGATGGCCAGGTATAGTTGGAT 59.415 47.826 13.05 0.00 36.55 3.41
465 476 2.894126 CGAGAGATGGCCAGGTATAGTT 59.106 50.000 13.05 0.00 0.00 2.24
467 478 1.821753 CCGAGAGATGGCCAGGTATAG 59.178 57.143 13.05 0.92 0.00 1.31
548 560 2.179427 GCTTGGGCCTGATTTTTAGGT 58.821 47.619 4.53 0.00 37.64 3.08
569 581 3.643595 TTTCGCAGGGATGGGCCAG 62.644 63.158 13.78 0.00 38.95 4.85
583 595 4.394712 AGGTCCGGCAGGCTTTCG 62.395 66.667 0.00 0.00 37.47 3.46
584 596 1.614241 TAGAGGTCCGGCAGGCTTTC 61.614 60.000 0.00 0.00 37.47 2.62
587 599 2.443016 CTAGAGGTCCGGCAGGCT 60.443 66.667 0.00 0.00 37.47 4.58
591 603 2.759973 CCAGCTAGAGGTCCGGCA 60.760 66.667 0.00 0.00 0.00 5.69
593 605 3.541713 GCCCAGCTAGAGGTCCGG 61.542 72.222 0.00 0.00 0.00 5.14
597 609 0.689412 GAAGAGGCCCAGCTAGAGGT 60.689 60.000 0.00 0.00 0.00 3.85
602 614 4.464008 CATTTAATGAAGAGGCCCAGCTA 58.536 43.478 0.00 0.00 0.00 3.32
603 615 3.294214 CATTTAATGAAGAGGCCCAGCT 58.706 45.455 0.00 0.00 0.00 4.24
607 619 2.387757 TGCCATTTAATGAAGAGGCCC 58.612 47.619 6.50 0.00 40.05 5.80
616 628 3.995705 CCCGCCATATTTGCCATTTAATG 59.004 43.478 0.00 0.00 0.00 1.90
625 637 2.551912 CCGGACCCGCCATATTTGC 61.552 63.158 0.00 0.00 38.24 3.68
654 666 4.338815 GGCCTAGGTTTTGAGCCC 57.661 61.111 11.31 0.00 37.66 5.19
697 717 1.866853 GCCTGAAAAAGCCTCACCCG 61.867 60.000 0.00 0.00 0.00 5.28
741 761 3.074412 GTCGGAAATATACCTGCCCATG 58.926 50.000 0.00 0.00 0.00 3.66
746 766 2.817901 ACGTGTCGGAAATATACCTGC 58.182 47.619 0.00 0.00 0.00 4.85
775 795 2.806621 GGGTTGTCGACGTACGCC 60.807 66.667 16.72 2.44 42.26 5.68
781 801 0.994263 GTTTATCGGGGTTGTCGACG 59.006 55.000 11.62 0.00 39.55 5.12
782 802 1.362768 GGTTTATCGGGGTTGTCGAC 58.637 55.000 9.11 9.11 39.55 4.20
783 803 0.249955 GGGTTTATCGGGGTTGTCGA 59.750 55.000 0.00 0.00 41.04 4.20
784 804 0.745486 GGGGTTTATCGGGGTTGTCG 60.745 60.000 0.00 0.00 0.00 4.35
785 805 0.328926 TGGGGTTTATCGGGGTTGTC 59.671 55.000 0.00 0.00 0.00 3.18
786 806 0.330267 CTGGGGTTTATCGGGGTTGT 59.670 55.000 0.00 0.00 0.00 3.32
787 807 0.330267 ACTGGGGTTTATCGGGGTTG 59.670 55.000 0.00 0.00 0.00 3.77
788 808 0.622136 GACTGGGGTTTATCGGGGTT 59.378 55.000 0.00 0.00 0.00 4.11
790 810 1.145377 CGACTGGGGTTTATCGGGG 59.855 63.158 0.00 0.00 0.00 5.73
834 2689 1.433879 CGCCGTCTAGGTCAGGAAG 59.566 63.158 0.00 0.00 43.70 3.46
835 2690 2.050350 CCGCCGTCTAGGTCAGGAA 61.050 63.158 0.00 0.00 43.70 3.36
837 2692 4.208686 GCCGCCGTCTAGGTCAGG 62.209 72.222 0.00 0.00 43.70 3.86
838 2693 4.554363 CGCCGCCGTCTAGGTCAG 62.554 72.222 0.00 0.00 43.70 3.51
864 2728 3.426568 GAGGCAGAAGCACACCGC 61.427 66.667 0.00 0.00 44.61 5.68
866 2730 1.673665 CAGGAGGCAGAAGCACACC 60.674 63.158 0.00 0.00 44.61 4.16
893 2757 3.253838 TCGGGGTGGAGGTTTGGG 61.254 66.667 0.00 0.00 0.00 4.12
897 2761 3.246880 GGTGTCGGGGTGGAGGTT 61.247 66.667 0.00 0.00 0.00 3.50
961 2825 4.632538 TGATGTTGTCGATATCACGAGT 57.367 40.909 3.12 0.00 42.88 4.18
1015 2879 0.487325 TCCAAGGAGACCAGGAGTGA 59.513 55.000 0.00 0.00 0.00 3.41
1022 2886 0.391597 GTGTTCGTCCAAGGAGACCA 59.608 55.000 0.00 0.00 32.91 4.02
1077 2941 3.254470 TCGGTTCCATTAGCGATTTCA 57.746 42.857 0.00 0.00 42.40 2.69
1128 2992 1.600957 GGAGGATGCGATGTGTGAATG 59.399 52.381 0.00 0.00 0.00 2.67
1229 3093 2.363683 CTTTCCTCCAAGGCACTGATC 58.636 52.381 0.00 0.00 40.86 2.92
1292 3156 2.979240 GGAGAGCTCCTAACCAACTTG 58.021 52.381 10.93 0.00 46.16 3.16
1351 3215 1.197721 CAACATCTGCAAGGTCGAACC 59.802 52.381 0.00 0.00 38.99 3.62
1355 3219 2.084610 TCTCAACATCTGCAAGGTCG 57.915 50.000 0.00 0.00 0.00 4.79
1364 3228 3.466836 TGAACGTGCTTTCTCAACATCT 58.533 40.909 0.00 0.00 0.00 2.90
1391 3255 6.238211 CCTTATTCAGCAGACATTACCTTTCG 60.238 42.308 0.00 0.00 0.00 3.46
1400 3264 6.839454 AGAATGATCCTTATTCAGCAGACAT 58.161 36.000 6.94 0.00 37.08 3.06
1404 3268 7.993101 TCAAAAGAATGATCCTTATTCAGCAG 58.007 34.615 6.94 0.00 37.08 4.24
1423 3287 7.912250 CGGATTATTGAACCAGAATCTCAAAAG 59.088 37.037 0.00 0.00 33.08 2.27
1437 3301 3.432252 CCTATCACCGCGGATTATTGAAC 59.568 47.826 35.90 0.00 0.00 3.18
1441 3305 3.323979 ACTTCCTATCACCGCGGATTATT 59.676 43.478 35.90 13.83 0.00 1.40
1443 3307 2.313317 ACTTCCTATCACCGCGGATTA 58.687 47.619 35.90 17.04 0.00 1.75
1444 3308 1.120530 ACTTCCTATCACCGCGGATT 58.879 50.000 35.90 18.05 0.00 3.01
1446 3310 1.406539 GTAACTTCCTATCACCGCGGA 59.593 52.381 35.90 11.57 0.00 5.54
1449 3313 3.521947 ACAGTAACTTCCTATCACCGC 57.478 47.619 0.00 0.00 0.00 5.68
1450 3314 5.103000 CAGAACAGTAACTTCCTATCACCG 58.897 45.833 0.00 0.00 0.00 4.94
1479 3345 8.492673 AGAACTGAAAATTTTCTGGGTTTTTC 57.507 30.769 29.86 24.23 39.52 2.29
1527 3395 9.555727 TCAGCAAAACTTAACTACAAAGTAGAT 57.444 29.630 10.87 2.04 36.17 1.98
1528 3396 8.951787 TCAGCAAAACTTAACTACAAAGTAGA 57.048 30.769 10.87 0.00 36.17 2.59
1529 3397 9.997482 TTTCAGCAAAACTTAACTACAAAGTAG 57.003 29.630 2.79 2.79 36.17 2.57
1531 3399 9.869757 AATTTCAGCAAAACTTAACTACAAAGT 57.130 25.926 0.00 0.00 38.82 2.66
1543 3411 9.651913 TGAACTAAAGAAAATTTCAGCAAAACT 57.348 25.926 8.55 0.00 0.00 2.66
1555 3423 8.188139 ACACGACATGTTTGAACTAAAGAAAAT 58.812 29.630 13.73 0.00 38.98 1.82
1560 3428 6.043327 TCACACGACATGTTTGAACTAAAG 57.957 37.500 13.73 0.00 40.64 1.85
1565 3433 4.085619 GCAATTCACACGACATGTTTGAAC 60.086 41.667 13.73 0.00 46.76 3.18
1577 3445 5.733226 TGTATTAGATGGCAATTCACACG 57.267 39.130 0.00 0.00 0.00 4.49
1579 3447 8.065473 ACAATTGTATTAGATGGCAATTCACA 57.935 30.769 9.97 0.00 38.86 3.58
1580 3448 7.649306 GGACAATTGTATTAGATGGCAATTCAC 59.351 37.037 11.95 0.00 38.86 3.18
1596 3464 7.094118 GCCCTAACAAACATAAGGACAATTGTA 60.094 37.037 11.95 0.00 31.33 2.41
1597 3465 6.295067 GCCCTAACAAACATAAGGACAATTGT 60.295 38.462 11.78 11.78 32.78 2.71
1598 3466 6.071391 AGCCCTAACAAACATAAGGACAATTG 60.071 38.462 3.24 3.24 0.00 2.32
1599 3467 6.016555 AGCCCTAACAAACATAAGGACAATT 58.983 36.000 0.00 0.00 0.00 2.32
1601 3469 4.993028 AGCCCTAACAAACATAAGGACAA 58.007 39.130 0.00 0.00 0.00 3.18
1602 3470 4.650972 AGCCCTAACAAACATAAGGACA 57.349 40.909 0.00 0.00 0.00 4.02
1603 3471 5.475564 TCAAAGCCCTAACAAACATAAGGAC 59.524 40.000 0.00 0.00 0.00 3.85
1604 3472 5.636123 TCAAAGCCCTAACAAACATAAGGA 58.364 37.500 0.00 0.00 0.00 3.36
1608 3478 6.065374 TGTTCTCAAAGCCCTAACAAACATA 58.935 36.000 0.00 0.00 0.00 2.29
1710 3580 1.797025 AGTTGCAACTTACCTCTCGC 58.203 50.000 26.36 0.00 35.21 5.03
1725 3595 6.303022 CGTAATGTAGTGTCATTTGCAAGTTG 59.697 38.462 0.00 0.00 38.68 3.16
1749 3619 3.561725 AGGACAGCAGAAAGAAGAAAACG 59.438 43.478 0.00 0.00 0.00 3.60
1774 3644 2.614520 ACCGACGACAGATCAGTATCAG 59.385 50.000 0.00 0.00 34.28 2.90
1825 3695 2.076100 CAATACTGCACGGCTCTTTGA 58.924 47.619 0.00 0.00 0.00 2.69
1835 3705 3.609853 TCTTGGGATCACAATACTGCAC 58.390 45.455 11.63 0.00 0.00 4.57
1900 3770 3.430042 AGTTCATCTGCCAGTTGATGT 57.570 42.857 6.32 0.00 40.46 3.06
2035 3966 4.616835 GCTTGAGAGAAAATTGAATGCGGT 60.617 41.667 0.00 0.00 0.00 5.68
2081 4012 2.285950 TGCGCAGTTTACGACAAAGTTC 60.286 45.455 5.66 0.00 0.00 3.01
2097 4028 1.079819 GCAGACCTAGAAGTGCGCA 60.080 57.895 5.66 5.66 0.00 6.09
2102 4033 0.610687 GCTGTGGCAGACCTAGAAGT 59.389 55.000 0.00 0.00 38.54 3.01
2171 4102 4.101448 CCTTCCTCAGGCACCCCG 62.101 72.222 0.00 0.00 35.13 5.73
2238 4169 6.712547 ACTTGATCAAGGTAAAGACTCCAAAG 59.287 38.462 33.11 8.68 42.53 2.77
2327 4263 7.430502 CGAATTTCCTACAAAAGATCATTGCTC 59.569 37.037 10.24 0.00 0.00 4.26
2478 4518 8.896744 CAAGAGGCATTACAAAAATAGATCTGA 58.103 33.333 5.18 0.00 0.00 3.27
2521 4561 2.890945 GCTAAGAAGCCCCAGTCAAAAA 59.109 45.455 0.00 0.00 43.40 1.94
2522 4562 2.514803 GCTAAGAAGCCCCAGTCAAAA 58.485 47.619 0.00 0.00 43.40 2.44
2523 4563 1.610624 CGCTAAGAAGCCCCAGTCAAA 60.611 52.381 0.00 0.00 46.68 2.69
2524 4564 0.036388 CGCTAAGAAGCCCCAGTCAA 60.036 55.000 0.00 0.00 46.68 3.18
2525 4565 1.192146 ACGCTAAGAAGCCCCAGTCA 61.192 55.000 0.00 0.00 46.68 3.41
2526 4566 0.822164 TACGCTAAGAAGCCCCAGTC 59.178 55.000 0.00 0.00 46.68 3.51
2527 4567 0.535797 GTACGCTAAGAAGCCCCAGT 59.464 55.000 0.00 0.00 46.68 4.00
2528 4568 0.824759 AGTACGCTAAGAAGCCCCAG 59.175 55.000 0.00 0.00 46.68 4.45
2529 4569 1.066430 CAAGTACGCTAAGAAGCCCCA 60.066 52.381 0.00 0.00 46.68 4.96
2530 4570 1.206371 TCAAGTACGCTAAGAAGCCCC 59.794 52.381 0.00 0.00 46.68 5.80
2531 4571 2.667473 TCAAGTACGCTAAGAAGCCC 57.333 50.000 0.00 0.00 46.68 5.19
2532 4572 3.124560 GGATCAAGTACGCTAAGAAGCC 58.875 50.000 0.00 0.00 46.68 4.35
2533 4573 2.789893 CGGATCAAGTACGCTAAGAAGC 59.210 50.000 0.00 0.00 45.86 3.86
2534 4574 4.030134 ACGGATCAAGTACGCTAAGAAG 57.970 45.455 0.00 0.00 37.83 2.85
2535 4575 5.762825 ATACGGATCAAGTACGCTAAGAA 57.237 39.130 0.00 0.00 37.83 2.52
2536 4576 5.762825 AATACGGATCAAGTACGCTAAGA 57.237 39.130 0.00 0.00 37.83 2.10
2537 4577 5.975344 TGAAATACGGATCAAGTACGCTAAG 59.025 40.000 0.00 0.00 37.83 2.18
2538 4578 5.745294 GTGAAATACGGATCAAGTACGCTAA 59.255 40.000 0.00 0.00 37.83 3.09
2539 4579 5.276270 GTGAAATACGGATCAAGTACGCTA 58.724 41.667 0.00 0.00 37.83 4.26
2544 4584 5.623956 ATGGGTGAAATACGGATCAAGTA 57.376 39.130 0.00 0.00 0.00 2.24
2554 4594 8.831715 AAATGAGACAAAAATGGGTGAAATAC 57.168 30.769 0.00 0.00 0.00 1.89
2602 4642 5.363868 ACAGCCTTGTGATCTTAGCTATACA 59.636 40.000 0.00 0.00 35.83 2.29
2616 4656 6.374333 ACCATACACTAAATTACAGCCTTGTG 59.626 38.462 0.00 0.00 38.23 3.33
2617 4657 6.481643 ACCATACACTAAATTACAGCCTTGT 58.518 36.000 0.00 0.00 41.39 3.16
2623 4663 9.825972 CAAACTGAACCATACACTAAATTACAG 57.174 33.333 0.00 0.00 0.00 2.74
2631 4671 5.009210 GCCAAACAAACTGAACCATACACTA 59.991 40.000 0.00 0.00 0.00 2.74
2652 4692 2.357881 CACGCTTGAGCTCAGCCA 60.358 61.111 23.61 9.00 39.32 4.75
2654 4694 0.948141 AGTTCACGCTTGAGCTCAGC 60.948 55.000 17.43 19.79 38.90 4.26
2655 4695 3.207677 AGTTCACGCTTGAGCTCAG 57.792 52.632 17.43 12.15 38.90 3.35
2678 4718 9.930693 GAAAGAGGACAGATTTAGTAAAGAGAA 57.069 33.333 1.21 0.00 0.00 2.87
2766 4861 9.130661 TCAAACAAATAGTTGATCTTTCCAGAA 57.869 29.630 10.35 0.00 41.19 3.02
2775 4870 7.389053 AGTCCTCAGTCAAACAAATAGTTGATC 59.611 37.037 10.35 0.00 41.19 2.92
2990 5089 2.097466 CACAAACTCGAGTGCCTTTTGT 59.903 45.455 20.85 21.10 40.22 2.83
3034 5136 8.084684 AGGAATTTTCTTTGACATTAAGTGAGC 58.915 33.333 0.00 0.00 0.00 4.26
3035 5137 9.403110 CAGGAATTTTCTTTGACATTAAGTGAG 57.597 33.333 0.00 0.00 0.00 3.51
3039 5141 9.748708 TTCACAGGAATTTTCTTTGACATTAAG 57.251 29.630 0.00 0.00 0.00 1.85
3061 5163 2.618241 TCCATAGGCGAATGCATTTCAC 59.382 45.455 14.33 6.73 45.35 3.18
3062 5164 2.929641 TCCATAGGCGAATGCATTTCA 58.070 42.857 14.33 0.00 45.35 2.69
3094 5196 9.043548 AGGAATAAAGTACTGAGCTAACCTAAA 57.956 33.333 0.00 0.00 0.00 1.85
3101 5203 8.362464 TCTCAAAGGAATAAAGTACTGAGCTA 57.638 34.615 0.00 0.00 31.26 3.32
3119 5221 4.246458 CGGAGGGAGTAGTTTTCTCAAAG 58.754 47.826 0.00 0.00 34.04 2.77
3134 5236 3.895656 CCTTACATTATGAGACGGAGGGA 59.104 47.826 0.00 0.00 0.00 4.20
3135 5237 3.641906 ACCTTACATTATGAGACGGAGGG 59.358 47.826 0.00 0.00 0.00 4.30
3136 5238 4.939052 ACCTTACATTATGAGACGGAGG 57.061 45.455 0.00 0.00 0.00 4.30
3137 5239 7.611213 AAAAACCTTACATTATGAGACGGAG 57.389 36.000 0.00 0.00 0.00 4.63
3180 5282 5.754778 CGTCCCAAAATCTAAGACGTTTTT 58.245 37.500 0.00 0.00 43.89 1.94
3181 5283 5.352643 CGTCCCAAAATCTAAGACGTTTT 57.647 39.130 0.00 0.00 43.89 2.43
3186 5288 3.939592 CCCTTCGTCCCAAAATCTAAGAC 59.060 47.826 0.00 0.00 0.00 3.01
3187 5289 3.841845 TCCCTTCGTCCCAAAATCTAAGA 59.158 43.478 0.00 0.00 0.00 2.10
3188 5290 4.081087 TCTCCCTTCGTCCCAAAATCTAAG 60.081 45.833 0.00 0.00 0.00 2.18
3189 5291 3.841845 TCTCCCTTCGTCCCAAAATCTAA 59.158 43.478 0.00 0.00 0.00 2.10
3190 5292 3.446968 TCTCCCTTCGTCCCAAAATCTA 58.553 45.455 0.00 0.00 0.00 1.98
3191 5293 2.266279 TCTCCCTTCGTCCCAAAATCT 58.734 47.619 0.00 0.00 0.00 2.40
3192 5294 2.747989 GTTCTCCCTTCGTCCCAAAATC 59.252 50.000 0.00 0.00 0.00 2.17
3193 5295 2.554564 GGTTCTCCCTTCGTCCCAAAAT 60.555 50.000 0.00 0.00 0.00 1.82
3194 5296 1.202842 GGTTCTCCCTTCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
3195 5297 0.399075 GGTTCTCCCTTCGTCCCAAA 59.601 55.000 0.00 0.00 0.00 3.28
3196 5298 0.473117 AGGTTCTCCCTTCGTCCCAA 60.473 55.000 0.00 0.00 42.73 4.12
3197 5299 1.157751 AGGTTCTCCCTTCGTCCCA 59.842 57.895 0.00 0.00 42.73 4.37
3198 5300 4.131932 AGGTTCTCCCTTCGTCCC 57.868 61.111 0.00 0.00 42.73 4.46
3206 5308 6.650427 AGAAACATTTTACAAGGTTCTCCC 57.350 37.500 0.00 0.00 35.86 4.30
3207 5309 8.817100 CAAAAGAAACATTTTACAAGGTTCTCC 58.183 33.333 0.00 0.00 35.86 3.71
3208 5310 9.581099 TCAAAAGAAACATTTTACAAGGTTCTC 57.419 29.630 0.00 0.00 35.86 2.87
3209 5311 9.936759 TTCAAAAGAAACATTTTACAAGGTTCT 57.063 25.926 0.00 0.00 35.86 3.01
3211 5313 9.161629 CCTTCAAAAGAAACATTTTACAAGGTT 57.838 29.630 10.75 0.00 38.55 3.50
3212 5314 7.768582 CCCTTCAAAAGAAACATTTTACAAGGT 59.231 33.333 14.59 0.00 38.40 3.50
3213 5315 7.768582 ACCCTTCAAAAGAAACATTTTACAAGG 59.231 33.333 11.45 11.45 39.01 3.61
3216 5318 7.125053 AGGACCCTTCAAAAGAAACATTTTACA 59.875 33.333 0.00 0.00 31.29 2.41
3226 5328 3.287222 CACACAGGACCCTTCAAAAGAA 58.713 45.455 0.00 0.00 0.00 2.52
3248 5350 6.432783 CAGATAGGGGTAGAGAACTAGACATG 59.567 46.154 0.00 0.00 0.00 3.21
3249 5351 6.468066 CCAGATAGGGGTAGAGAACTAGACAT 60.468 46.154 0.00 0.00 0.00 3.06
3252 5354 4.982956 ACCAGATAGGGGTAGAGAACTAGA 59.017 45.833 0.00 0.00 43.89 2.43
3253 5355 5.327737 ACCAGATAGGGGTAGAGAACTAG 57.672 47.826 0.00 0.00 43.89 2.57
3255 5357 5.952161 ATACCAGATAGGGGTAGAGAACT 57.048 43.478 0.00 0.00 43.71 3.01
3256 5358 5.839606 ACAATACCAGATAGGGGTAGAGAAC 59.160 44.000 0.00 0.00 43.71 3.01
3257 5359 6.039415 ACAATACCAGATAGGGGTAGAGAA 57.961 41.667 0.00 0.00 43.71 2.87
3258 5360 5.681494 ACAATACCAGATAGGGGTAGAGA 57.319 43.478 0.00 0.00 43.71 3.10
3259 5361 5.012148 CCAACAATACCAGATAGGGGTAGAG 59.988 48.000 0.00 0.00 43.71 2.43
3260 5362 4.905456 CCAACAATACCAGATAGGGGTAGA 59.095 45.833 0.00 0.00 43.71 2.59
3261 5363 4.905456 TCCAACAATACCAGATAGGGGTAG 59.095 45.833 0.00 0.00 43.71 3.18
3264 5366 3.716872 AGTCCAACAATACCAGATAGGGG 59.283 47.826 0.00 0.00 43.89 4.79
3272 5381 6.539173 ACACATTCTTAGTCCAACAATACCA 58.461 36.000 0.00 0.00 0.00 3.25
3337 5446 5.458041 AACAAGATGGTCAAGAACAATGG 57.542 39.130 0.00 0.00 0.00 3.16
3372 5481 9.676861 ATGTCATTAAGAAAGATTCATGTCTCA 57.323 29.630 0.00 0.00 0.00 3.27
3427 5536 2.039084 AGAAAACCTTGTCTCGGCATCT 59.961 45.455 0.00 0.00 0.00 2.90
3432 5541 3.120649 CGCTAAAGAAAACCTTGTCTCGG 60.121 47.826 0.00 0.00 34.79 4.63
3446 9298 4.846779 AAGGCAAATTGAACGCTAAAGA 57.153 36.364 0.00 0.00 0.00 2.52
3469 9321 7.013559 CCATGCCATCACTAACATTAATTCAGA 59.986 37.037 0.00 0.00 0.00 3.27
3504 9519 5.402270 GCACCTTTGTAATGACATGACAAAC 59.598 40.000 22.30 12.09 37.97 2.93
3505 9520 5.301551 AGCACCTTTGTAATGACATGACAAA 59.698 36.000 23.86 23.86 39.96 2.83
3559 9574 4.022416 TGCTTTAATATAATGCGGGGCAAG 60.022 41.667 0.00 0.00 43.62 4.01
3596 9612 0.383949 GTCATGTTGTTTGTGCGGGT 59.616 50.000 0.00 0.00 0.00 5.28
3612 9628 2.515057 GCGTGGGTTGTGGTGTCA 60.515 61.111 0.00 0.00 0.00 3.58
3624 9640 3.673484 CTTGCCTTGGGTGCGTGG 61.673 66.667 0.00 0.00 0.00 4.94
3628 9644 1.202348 GTTGTATCTTGCCTTGGGTGC 59.798 52.381 0.00 0.00 0.00 5.01
3649 9665 3.788227 TTGTTGCCATTCCTCTACACT 57.212 42.857 0.00 0.00 0.00 3.55
3650 9666 3.366374 GCTTTGTTGCCATTCCTCTACAC 60.366 47.826 0.00 0.00 0.00 2.90
3679 9695 1.353358 TCTGGGAGTCCTAGTTCGTCA 59.647 52.381 20.95 1.61 0.00 4.35
3682 9698 0.733729 CGTCTGGGAGTCCTAGTTCG 59.266 60.000 20.95 20.58 0.00 3.95
3696 9712 1.738099 CCCTTGAAGGCGTCGTCTG 60.738 63.158 5.50 0.00 32.73 3.51
3699 9715 2.513259 TTCCCCTTGAAGGCGTCGT 61.513 57.895 5.50 0.00 32.73 4.34
3702 9718 2.032071 CGTTCCCCTTGAAGGCGT 59.968 61.111 5.50 0.00 32.73 5.68
3703 9719 2.033194 GTCGTTCCCCTTGAAGGCG 61.033 63.158 5.50 4.09 38.45 5.52
3713 9729 2.663852 CACACCCGTGTCGTTCCC 60.664 66.667 0.00 0.00 42.83 3.97
3714 9730 3.343421 GCACACCCGTGTCGTTCC 61.343 66.667 0.00 0.00 45.50 3.62
3716 9732 2.279918 GAGCACACCCGTGTCGTT 60.280 61.111 0.00 0.00 45.50 3.85
3717 9733 3.083848 TTGAGCACACCCGTGTCGT 62.084 57.895 0.00 0.00 45.50 4.34
3718 9734 2.279851 TTGAGCACACCCGTGTCG 60.280 61.111 0.00 0.00 45.50 4.35
3719 9735 2.594962 CGTTGAGCACACCCGTGTC 61.595 63.158 0.00 0.00 45.50 3.67
3730 9746 1.344942 AAGACGTCATCGCGTTGAGC 61.345 55.000 19.61 13.18 45.79 4.26
3731 9747 0.635731 GAAGACGTCATCGCGTTGAG 59.364 55.000 19.61 15.21 45.79 3.02
3733 9749 0.363512 CTGAAGACGTCATCGCGTTG 59.636 55.000 19.50 10.93 45.79 4.10
3734 9750 0.732880 CCTGAAGACGTCATCGCGTT 60.733 55.000 19.50 1.17 45.79 4.84
3736 9752 0.456142 TTCCTGAAGACGTCATCGCG 60.456 55.000 19.50 10.28 41.18 5.87
3737 9753 1.272781 CTTCCTGAAGACGTCATCGC 58.727 55.000 19.50 4.22 40.79 4.58
3738 9754 1.472878 TCCTTCCTGAAGACGTCATCG 59.527 52.381 19.50 11.36 40.79 3.84
3740 9756 4.895889 TCATATCCTTCCTGAAGACGTCAT 59.104 41.667 19.50 5.41 40.79 3.06
3741 9757 4.098044 GTCATATCCTTCCTGAAGACGTCA 59.902 45.833 19.50 0.00 40.79 4.35
3743 9759 4.023980 TGTCATATCCTTCCTGAAGACGT 58.976 43.478 8.46 0.00 40.79 4.34
3745 9761 5.070981 TGGATGTCATATCCTTCCTGAAGAC 59.929 44.000 8.46 0.00 40.79 3.01
3746 9762 5.070981 GTGGATGTCATATCCTTCCTGAAGA 59.929 44.000 8.46 0.00 40.79 2.87
3747 9763 5.303971 GTGGATGTCATATCCTTCCTGAAG 58.696 45.833 1.60 0.00 38.95 3.02
3749 9765 3.321968 CGTGGATGTCATATCCTTCCTGA 59.678 47.826 1.60 0.00 38.95 3.86
3761 9807 2.261361 CAGCGTCCGTGGATGTCA 59.739 61.111 9.73 0.00 33.91 3.58
3796 9842 0.252057 TCATCCCCTTGTCTGGTCGA 60.252 55.000 0.00 0.00 0.00 4.20
3819 9865 0.887933 GGAGGCGGATTTTGCTTCAA 59.112 50.000 0.00 0.00 39.93 2.69
3822 9868 0.539438 TGTGGAGGCGGATTTTGCTT 60.539 50.000 0.00 0.00 0.00 3.91
3824 9870 0.532115 ATTGTGGAGGCGGATTTTGC 59.468 50.000 0.00 0.00 0.00 3.68
3825 9871 1.545582 ACATTGTGGAGGCGGATTTTG 59.454 47.619 0.00 0.00 0.00 2.44
3826 9872 1.545582 CACATTGTGGAGGCGGATTTT 59.454 47.619 9.00 0.00 0.00 1.82
3839 9886 0.884704 GTCCAGTCGCACCACATTGT 60.885 55.000 0.00 0.00 0.00 2.71
3855 9902 2.050077 GCAGTTGGCTTTGCGTCC 60.050 61.111 0.00 0.00 40.25 4.79
3909 9956 2.167219 CATAGTCGTGTGGGCTGCG 61.167 63.158 0.00 0.00 0.00 5.18
3914 9961 4.932789 CCACCATAGTCGTGTGGG 57.067 61.111 0.00 0.00 44.64 4.61
3936 9983 1.748122 CTCATGGCTCAGGTGTGGC 60.748 63.158 0.00 0.00 35.11 5.01
3963 10011 3.680786 TGGGAGACGTGGTGCTCG 61.681 66.667 0.00 0.00 31.95 5.03
4005 10053 1.846124 GGAGGTGGGGTGGTCTCAA 60.846 63.158 0.00 0.00 0.00 3.02
4006 10054 2.203938 GGAGGTGGGGTGGTCTCA 60.204 66.667 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.