Multiple sequence alignment - TraesCS1A01G240300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G240300 chr1A 100.000 4583 0 0 1 4583 427481448 427486030 0.000000e+00 8464.0
1 TraesCS1A01G240300 chr1A 90.323 62 6 0 4327 4388 427485724 427485785 1.060000e-11 82.4
2 TraesCS1A01G240300 chr1A 90.323 62 6 0 4277 4338 427485774 427485835 1.060000e-11 82.4
3 TraesCS1A01G240300 chr1D 94.342 4012 184 25 348 4336 330525267 330529258 0.000000e+00 6111.0
4 TraesCS1A01G240300 chr1D 91.892 259 17 2 4327 4581 330529199 330529457 4.360000e-95 359.0
5 TraesCS1A01G240300 chr1D 83.333 96 16 0 339 434 282702643 282702548 6.320000e-14 89.8
6 TraesCS1A01G240300 chr1B 94.134 2148 92 16 346 2490 445177790 445179906 0.000000e+00 3238.0
7 TraesCS1A01G240300 chr1B 92.303 1598 83 16 2521 4107 445179904 445181472 0.000000e+00 2233.0
8 TraesCS1A01G240300 chr1B 89.073 302 27 5 48 346 487943448 487943150 2.010000e-98 370.0
9 TraesCS1A01G240300 chr1B 89.000 300 29 3 48 346 529542236 529541940 7.240000e-98 368.0
10 TraesCS1A01G240300 chr1B 90.594 202 16 1 4327 4528 445181613 445181811 9.780000e-67 265.0
11 TraesCS1A01G240300 chr1B 91.429 175 11 4 4164 4338 445181504 445181674 2.130000e-58 237.0
12 TraesCS1A01G240300 chr6B 93.235 340 22 1 1 340 186698102 186697764 2.460000e-137 499.0
13 TraesCS1A01G240300 chr6B 95.833 48 2 0 339 386 7116284 7116331 1.370000e-10 78.7
14 TraesCS1A01G240300 chr2B 92.486 346 25 1 1 346 186944248 186943904 1.150000e-135 494.0
15 TraesCS1A01G240300 chr2A 92.486 346 21 2 1 346 718497622 718497282 1.480000e-134 490.0
16 TraesCS1A01G240300 chr5A 90.365 301 24 4 48 346 216989466 216989169 1.550000e-104 390.0
17 TraesCS1A01G240300 chr4D 90.000 300 25 5 49 346 446122009 446121713 2.590000e-102 383.0
18 TraesCS1A01G240300 chr7D 89.037 301 27 5 48 346 604054361 604054065 7.240000e-98 368.0
19 TraesCS1A01G240300 chr3B 89.037 301 28 4 48 346 93356936 93357233 7.240000e-98 368.0
20 TraesCS1A01G240300 chr6D 83.967 368 33 12 1 346 430323981 430323618 3.420000e-86 329.0
21 TraesCS1A01G240300 chr5B 83.871 93 15 0 339 431 424433440 424433532 6.320000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G240300 chr1A 427481448 427486030 4582 False 2876.266667 8464 93.548667 1 4583 3 chr1A.!!$F1 4582
1 TraesCS1A01G240300 chr1D 330525267 330529457 4190 False 3235.000000 6111 93.117000 348 4581 2 chr1D.!!$F1 4233
2 TraesCS1A01G240300 chr1B 445177790 445181811 4021 False 1493.250000 3238 92.115000 346 4528 4 chr1B.!!$F1 4182

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.032678 AGTGCCTCGACTGTCTGTTG 59.967 55.0 6.21 0.00 0.00 3.33 F
235 236 0.242825 TTCGTTCGCTGATCCTTCGT 59.757 50.0 0.00 0.00 0.00 3.85 F
286 287 0.248134 GTTCATCGTCGGAGTCGGAG 60.248 60.0 0.00 0.00 39.90 4.63 F
337 338 0.314935 TTGTGCTGCAGCTTTTAGGC 59.685 50.0 36.61 18.32 42.66 3.93 F
338 339 0.538057 TGTGCTGCAGCTTTTAGGCT 60.538 50.0 36.61 0.00 44.10 4.58 F
764 771 0.802222 ACTGTCGGCAATCATCGTCG 60.802 55.0 0.00 0.00 0.00 5.12 F
2114 2127 0.820871 GACGAGCCTGAGACTCCAAT 59.179 55.0 0.00 0.00 0.00 3.16 F
3429 3448 0.599466 CATCCGCTGATGTGCTCGAT 60.599 55.0 9.76 0.00 42.87 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1620 1633 1.153628 GGACAGGTTCCCGATGTCG 60.154 63.158 0.00 0.0 43.39 4.35 R
2113 2126 1.730487 CGAGGTCGTGCTGCTCTAT 59.270 57.895 0.00 0.0 34.11 1.98 R
2134 2147 2.241176 ACCTCACTTTCTGGTCCAACAA 59.759 45.455 0.00 0.0 0.00 2.83 R
2303 2316 0.329596 AATGGCCTCAACCTCAGTCC 59.670 55.000 3.32 0.0 0.00 3.85 R
2306 2319 1.318158 GCCAATGGCCTCAACCTCAG 61.318 60.000 14.47 0.0 44.06 3.35 R
2350 2363 1.622725 CCAGTAGTAGGCCCTCAAGGT 60.623 57.143 0.00 0.0 38.26 3.50 R
3442 3461 0.615850 CCTTCCTGTTCAGAGTCCCC 59.384 60.000 1.00 0.0 0.00 4.81 R
4269 4317 2.099427 GGTCCTTAGAACACTAGAGGCG 59.901 54.545 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.179579 GGCATCGGCAAGCGGAAC 62.180 66.667 6.40 2.57 43.71 3.62
18 19 4.179579 GCATCGGCAAGCGGAACC 62.180 66.667 6.40 0.00 40.72 3.62
26 27 2.593436 AAGCGGAACCGGTGGTTG 60.593 61.111 18.24 0.00 46.95 3.77
27 28 4.636435 AGCGGAACCGGTGGTTGG 62.636 66.667 8.52 0.00 46.95 3.77
46 47 3.766691 GGCGGTTGAGGCGTCCTA 61.767 66.667 3.56 0.00 31.76 2.94
47 48 2.202756 GCGGTTGAGGCGTCCTAG 60.203 66.667 3.56 0.00 31.76 3.02
48 49 2.202756 CGGTTGAGGCGTCCTAGC 60.203 66.667 3.56 1.20 31.76 3.42
49 50 2.711922 CGGTTGAGGCGTCCTAGCT 61.712 63.158 3.56 0.00 31.76 3.32
50 51 1.597461 GGTTGAGGCGTCCTAGCTT 59.403 57.895 3.56 0.00 31.76 3.74
51 52 0.460459 GGTTGAGGCGTCCTAGCTTC 60.460 60.000 3.56 0.00 42.62 3.86
52 53 0.533032 GTTGAGGCGTCCTAGCTTCT 59.467 55.000 3.56 0.00 42.73 2.85
53 54 0.532573 TTGAGGCGTCCTAGCTTCTG 59.467 55.000 3.56 0.00 42.73 3.02
54 55 0.612174 TGAGGCGTCCTAGCTTCTGT 60.612 55.000 3.56 0.00 42.73 3.41
55 56 0.179124 GAGGCGTCCTAGCTTCTGTG 60.179 60.000 0.00 0.00 39.71 3.66
56 57 1.153549 GGCGTCCTAGCTTCTGTGG 60.154 63.158 0.00 0.00 37.29 4.17
57 58 1.811679 GCGTCCTAGCTTCTGTGGC 60.812 63.158 0.00 0.00 0.00 5.01
58 59 1.591703 CGTCCTAGCTTCTGTGGCA 59.408 57.895 0.00 0.00 0.00 4.92
59 60 0.037326 CGTCCTAGCTTCTGTGGCAA 60.037 55.000 0.00 0.00 0.00 4.52
60 61 1.443802 GTCCTAGCTTCTGTGGCAAC 58.556 55.000 0.00 0.00 0.00 4.17
61 62 0.037326 TCCTAGCTTCTGTGGCAACG 60.037 55.000 0.00 0.00 42.51 4.10
62 63 0.037326 CCTAGCTTCTGTGGCAACGA 60.037 55.000 0.00 0.00 42.51 3.85
63 64 1.406069 CCTAGCTTCTGTGGCAACGAT 60.406 52.381 0.00 0.00 42.51 3.73
64 65 1.662629 CTAGCTTCTGTGGCAACGATG 59.337 52.381 0.00 0.00 42.51 3.84
65 66 0.035317 AGCTTCTGTGGCAACGATGA 59.965 50.000 0.00 0.00 42.51 2.92
66 67 0.166814 GCTTCTGTGGCAACGATGAC 59.833 55.000 0.00 0.00 42.51 3.06
67 68 0.439985 CTTCTGTGGCAACGATGACG 59.560 55.000 0.00 0.00 37.40 4.35
68 69 0.948623 TTCTGTGGCAACGATGACGG 60.949 55.000 0.00 0.00 44.46 4.79
69 70 3.027170 CTGTGGCAACGATGACGGC 62.027 63.158 0.00 0.00 44.46 5.68
70 71 4.147322 GTGGCAACGATGACGGCG 62.147 66.667 4.80 4.80 44.46 6.46
71 72 4.365505 TGGCAACGATGACGGCGA 62.366 61.111 16.62 0.00 44.46 5.54
72 73 2.890474 GGCAACGATGACGGCGAT 60.890 61.111 16.62 0.00 44.46 4.58
73 74 2.321060 GCAACGATGACGGCGATG 59.679 61.111 16.62 0.00 44.46 3.84
74 75 2.164663 GCAACGATGACGGCGATGA 61.165 57.895 16.62 0.00 44.46 2.92
75 76 1.920051 CAACGATGACGGCGATGAG 59.080 57.895 16.62 3.06 44.46 2.90
87 88 2.598045 CGATGAGCAATGTCGGAGG 58.402 57.895 0.00 0.00 0.00 4.30
88 89 1.493950 CGATGAGCAATGTCGGAGGC 61.494 60.000 0.00 0.00 0.00 4.70
89 90 1.493950 GATGAGCAATGTCGGAGGCG 61.494 60.000 0.00 0.00 28.88 5.52
90 91 2.125512 GAGCAATGTCGGAGGCGT 60.126 61.111 0.00 0.00 28.88 5.68
91 92 2.434884 AGCAATGTCGGAGGCGTG 60.435 61.111 0.00 0.00 28.88 5.34
92 93 3.499737 GCAATGTCGGAGGCGTGG 61.500 66.667 0.00 0.00 28.88 4.94
93 94 3.499737 CAATGTCGGAGGCGTGGC 61.500 66.667 0.00 0.00 28.88 5.01
105 106 4.619227 CGTGGCCTTGGTCGTGGT 62.619 66.667 3.32 0.00 0.00 4.16
106 107 2.745037 GTGGCCTTGGTCGTGGTA 59.255 61.111 3.32 0.00 0.00 3.25
107 108 1.375523 GTGGCCTTGGTCGTGGTAG 60.376 63.158 3.32 0.00 0.00 3.18
108 109 1.839747 TGGCCTTGGTCGTGGTAGT 60.840 57.895 3.32 0.00 0.00 2.73
109 110 1.079336 GGCCTTGGTCGTGGTAGTC 60.079 63.158 0.00 0.00 0.00 2.59
110 111 1.445582 GCCTTGGTCGTGGTAGTCG 60.446 63.158 0.00 0.00 0.00 4.18
111 112 1.214589 CCTTGGTCGTGGTAGTCGG 59.785 63.158 0.00 0.00 0.00 4.79
112 113 1.445582 CTTGGTCGTGGTAGTCGGC 60.446 63.158 0.00 0.00 0.00 5.54
113 114 1.874345 CTTGGTCGTGGTAGTCGGCT 61.874 60.000 0.00 0.00 33.27 5.52
114 115 1.870055 TTGGTCGTGGTAGTCGGCTC 61.870 60.000 0.00 0.00 33.27 4.70
115 116 2.045131 GGTCGTGGTAGTCGGCTCT 61.045 63.158 0.00 0.00 33.27 4.09
116 117 1.593296 GGTCGTGGTAGTCGGCTCTT 61.593 60.000 0.00 0.00 33.27 2.85
117 118 0.179169 GTCGTGGTAGTCGGCTCTTC 60.179 60.000 0.00 0.00 0.00 2.87
118 119 0.322277 TCGTGGTAGTCGGCTCTTCT 60.322 55.000 0.00 0.00 0.00 2.85
119 120 0.526662 CGTGGTAGTCGGCTCTTCTT 59.473 55.000 0.00 0.00 0.00 2.52
120 121 1.467713 CGTGGTAGTCGGCTCTTCTTC 60.468 57.143 0.00 0.00 0.00 2.87
121 122 1.819903 GTGGTAGTCGGCTCTTCTTCT 59.180 52.381 0.00 0.00 0.00 2.85
122 123 2.093106 TGGTAGTCGGCTCTTCTTCTC 58.907 52.381 0.00 0.00 0.00 2.87
123 124 1.406180 GGTAGTCGGCTCTTCTTCTCC 59.594 57.143 0.00 0.00 0.00 3.71
124 125 1.064357 GTAGTCGGCTCTTCTTCTCCG 59.936 57.143 0.00 0.00 42.96 4.63
125 126 1.139947 GTCGGCTCTTCTTCTCCGG 59.860 63.158 0.00 0.00 41.98 5.14
126 127 2.202810 CGGCTCTTCTTCTCCGGC 60.203 66.667 0.00 0.00 38.35 6.13
127 128 2.202810 GGCTCTTCTTCTCCGGCG 60.203 66.667 0.00 0.00 0.00 6.46
128 129 2.574399 GCTCTTCTTCTCCGGCGT 59.426 61.111 6.01 0.00 0.00 5.68
129 130 1.807573 GCTCTTCTTCTCCGGCGTG 60.808 63.158 6.01 0.00 0.00 5.34
130 131 1.587054 CTCTTCTTCTCCGGCGTGT 59.413 57.895 6.01 0.00 0.00 4.49
131 132 0.456995 CTCTTCTTCTCCGGCGTGTC 60.457 60.000 6.01 0.00 0.00 3.67
132 133 1.446272 CTTCTTCTCCGGCGTGTCC 60.446 63.158 6.01 0.00 0.00 4.02
133 134 2.154798 CTTCTTCTCCGGCGTGTCCA 62.155 60.000 6.01 0.00 34.01 4.02
134 135 1.541310 TTCTTCTCCGGCGTGTCCAT 61.541 55.000 6.01 0.00 34.01 3.41
135 136 1.811266 CTTCTCCGGCGTGTCCATG 60.811 63.158 6.01 0.00 34.01 3.66
136 137 3.309436 TTCTCCGGCGTGTCCATGG 62.309 63.158 4.97 4.97 34.01 3.66
137 138 4.838152 CTCCGGCGTGTCCATGGG 62.838 72.222 13.02 0.00 34.01 4.00
139 140 4.838152 CCGGCGTGTCCATGGGAG 62.838 72.222 13.02 2.09 29.39 4.30
140 141 4.082523 CGGCGTGTCCATGGGAGT 62.083 66.667 13.02 0.00 29.39 3.85
141 142 2.436646 GGCGTGTCCATGGGAGTG 60.437 66.667 13.02 1.06 29.39 3.51
142 143 3.127533 GCGTGTCCATGGGAGTGC 61.128 66.667 13.02 8.03 29.39 4.40
143 144 2.436646 CGTGTCCATGGGAGTGCC 60.437 66.667 13.02 0.00 29.39 5.01
144 145 2.959484 CGTGTCCATGGGAGTGCCT 61.959 63.158 13.02 0.00 29.39 4.75
145 146 1.078143 GTGTCCATGGGAGTGCCTC 60.078 63.158 13.02 0.00 29.39 4.70
146 147 2.187946 GTCCATGGGAGTGCCTCG 59.812 66.667 13.02 0.00 29.39 4.63
147 148 2.038813 TCCATGGGAGTGCCTCGA 59.961 61.111 13.02 0.00 0.00 4.04
148 149 2.187946 CCATGGGAGTGCCTCGAC 59.812 66.667 2.85 0.00 0.00 4.20
149 150 2.362369 CCATGGGAGTGCCTCGACT 61.362 63.158 2.85 0.00 0.00 4.18
150 151 1.153489 CATGGGAGTGCCTCGACTG 60.153 63.158 1.06 0.00 0.00 3.51
151 152 1.610673 ATGGGAGTGCCTCGACTGT 60.611 57.895 1.06 0.00 0.00 3.55
152 153 1.608717 ATGGGAGTGCCTCGACTGTC 61.609 60.000 1.06 0.00 0.00 3.51
153 154 1.979693 GGGAGTGCCTCGACTGTCT 60.980 63.158 6.21 0.00 0.00 3.41
154 155 1.214062 GGAGTGCCTCGACTGTCTG 59.786 63.158 6.21 0.01 0.00 3.51
155 156 1.528292 GGAGTGCCTCGACTGTCTGT 61.528 60.000 6.21 0.00 0.00 3.41
156 157 0.315568 GAGTGCCTCGACTGTCTGTT 59.684 55.000 6.21 0.00 0.00 3.16
157 158 0.032678 AGTGCCTCGACTGTCTGTTG 59.967 55.000 6.21 0.00 0.00 3.33
158 159 0.249489 GTGCCTCGACTGTCTGTTGT 60.249 55.000 6.21 0.00 0.00 3.32
159 160 0.464036 TGCCTCGACTGTCTGTTGTT 59.536 50.000 6.21 0.00 0.00 2.83
160 161 0.861837 GCCTCGACTGTCTGTTGTTG 59.138 55.000 6.21 0.00 0.00 3.33
161 162 1.806623 GCCTCGACTGTCTGTTGTTGT 60.807 52.381 6.21 0.00 0.00 3.32
162 163 1.860950 CCTCGACTGTCTGTTGTTGTG 59.139 52.381 6.21 0.00 0.00 3.33
163 164 2.481276 CCTCGACTGTCTGTTGTTGTGA 60.481 50.000 6.21 0.00 0.00 3.58
164 165 3.186909 CTCGACTGTCTGTTGTTGTGAA 58.813 45.455 6.21 0.00 0.00 3.18
165 166 3.186909 TCGACTGTCTGTTGTTGTGAAG 58.813 45.455 6.21 0.00 0.00 3.02
166 167 2.930040 CGACTGTCTGTTGTTGTGAAGT 59.070 45.455 6.21 0.00 0.00 3.01
167 168 3.000322 CGACTGTCTGTTGTTGTGAAGTC 60.000 47.826 6.21 0.00 0.00 3.01
168 169 2.930040 ACTGTCTGTTGTTGTGAAGTCG 59.070 45.455 0.00 0.00 0.00 4.18
169 170 3.186909 CTGTCTGTTGTTGTGAAGTCGA 58.813 45.455 0.00 0.00 0.00 4.20
170 171 3.591023 TGTCTGTTGTTGTGAAGTCGAA 58.409 40.909 0.00 0.00 0.00 3.71
171 172 3.616821 TGTCTGTTGTTGTGAAGTCGAAG 59.383 43.478 0.00 0.00 0.00 3.79
172 173 2.607635 TCTGTTGTTGTGAAGTCGAAGC 59.392 45.455 0.00 0.00 0.00 3.86
173 174 1.668751 TGTTGTTGTGAAGTCGAAGCC 59.331 47.619 0.00 0.00 0.00 4.35
174 175 0.934496 TTGTTGTGAAGTCGAAGCCG 59.066 50.000 0.00 0.00 37.07 5.52
175 176 1.204312 GTTGTGAAGTCGAAGCCGC 59.796 57.895 0.00 0.00 35.37 6.53
176 177 1.959226 TTGTGAAGTCGAAGCCGCC 60.959 57.895 0.00 0.00 35.37 6.13
177 178 3.479269 GTGAAGTCGAAGCCGCCG 61.479 66.667 0.00 0.00 35.37 6.46
178 179 3.986006 TGAAGTCGAAGCCGCCGT 61.986 61.111 0.00 0.00 35.37 5.68
179 180 3.479269 GAAGTCGAAGCCGCCGTG 61.479 66.667 0.00 0.00 35.37 4.94
198 199 2.862780 GGGGGCCAGTGGTATATGA 58.137 57.895 11.74 0.00 0.00 2.15
199 200 1.372501 GGGGGCCAGTGGTATATGAT 58.627 55.000 11.74 0.00 0.00 2.45
200 201 1.004745 GGGGGCCAGTGGTATATGATG 59.995 57.143 11.74 0.00 0.00 3.07
201 202 1.985159 GGGGCCAGTGGTATATGATGA 59.015 52.381 11.74 0.00 0.00 2.92
202 203 2.290323 GGGGCCAGTGGTATATGATGAC 60.290 54.545 11.74 0.00 0.00 3.06
203 204 2.612972 GGGCCAGTGGTATATGATGACG 60.613 54.545 11.74 0.00 0.00 4.35
204 205 2.069273 GCCAGTGGTATATGATGACGC 58.931 52.381 11.74 0.00 0.00 5.19
205 206 2.328473 CCAGTGGTATATGATGACGCG 58.672 52.381 3.53 3.53 0.00 6.01
206 207 2.328473 CAGTGGTATATGATGACGCGG 58.672 52.381 12.47 0.00 0.00 6.46
207 208 1.272490 AGTGGTATATGATGACGCGGG 59.728 52.381 12.47 0.00 0.00 6.13
208 209 1.271379 GTGGTATATGATGACGCGGGA 59.729 52.381 12.47 0.00 0.00 5.14
209 210 1.271379 TGGTATATGATGACGCGGGAC 59.729 52.381 12.47 0.00 0.00 4.46
210 211 1.271379 GGTATATGATGACGCGGGACA 59.729 52.381 12.47 6.82 0.00 4.02
211 212 2.596452 GTATATGATGACGCGGGACAG 58.404 52.381 12.47 0.00 0.00 3.51
212 213 0.318441 ATATGATGACGCGGGACAGG 59.682 55.000 12.47 0.00 0.00 4.00
213 214 1.040893 TATGATGACGCGGGACAGGT 61.041 55.000 12.47 0.00 0.00 4.00
214 215 2.509336 GATGACGCGGGACAGGTG 60.509 66.667 12.47 0.00 0.00 4.00
215 216 4.082523 ATGACGCGGGACAGGTGG 62.083 66.667 12.47 0.00 0.00 4.61
217 218 4.309950 GACGCGGGACAGGTGGTT 62.310 66.667 12.47 0.00 0.00 3.67
218 219 4.309950 ACGCGGGACAGGTGGTTC 62.310 66.667 12.47 0.00 0.00 3.62
220 221 4.309950 GCGGGACAGGTGGTTCGT 62.310 66.667 0.00 0.00 0.00 3.85
221 222 2.424302 CGGGACAGGTGGTTCGTT 59.576 61.111 0.00 0.00 0.00 3.85
222 223 1.666872 CGGGACAGGTGGTTCGTTC 60.667 63.158 0.00 0.00 0.00 3.95
223 224 1.666872 GGGACAGGTGGTTCGTTCG 60.667 63.158 0.00 0.00 0.00 3.95
224 225 2.315386 GGACAGGTGGTTCGTTCGC 61.315 63.158 0.00 0.00 0.00 4.70
225 226 1.300697 GACAGGTGGTTCGTTCGCT 60.301 57.895 0.00 0.00 0.00 4.93
226 227 1.557443 GACAGGTGGTTCGTTCGCTG 61.557 60.000 0.00 0.00 0.00 5.18
227 228 1.300620 CAGGTGGTTCGTTCGCTGA 60.301 57.895 0.00 0.00 0.00 4.26
228 229 0.670546 CAGGTGGTTCGTTCGCTGAT 60.671 55.000 0.00 0.00 0.00 2.90
229 230 0.389948 AGGTGGTTCGTTCGCTGATC 60.390 55.000 0.00 0.00 0.00 2.92
230 231 1.359459 GGTGGTTCGTTCGCTGATCC 61.359 60.000 0.00 0.00 0.00 3.36
231 232 0.389948 GTGGTTCGTTCGCTGATCCT 60.390 55.000 0.00 0.00 0.00 3.24
232 233 0.320374 TGGTTCGTTCGCTGATCCTT 59.680 50.000 0.00 0.00 0.00 3.36
233 234 1.000145 GGTTCGTTCGCTGATCCTTC 59.000 55.000 0.00 0.00 0.00 3.46
234 235 0.640768 GTTCGTTCGCTGATCCTTCG 59.359 55.000 0.00 0.00 0.00 3.79
235 236 0.242825 TTCGTTCGCTGATCCTTCGT 59.757 50.000 0.00 0.00 0.00 3.85
236 237 0.456142 TCGTTCGCTGATCCTTCGTG 60.456 55.000 0.00 0.00 0.00 4.35
237 238 0.456142 CGTTCGCTGATCCTTCGTGA 60.456 55.000 0.00 0.00 0.00 4.35
238 239 0.992802 GTTCGCTGATCCTTCGTGAC 59.007 55.000 0.00 0.00 0.00 3.67
239 240 0.456142 TTCGCTGATCCTTCGTGACG 60.456 55.000 0.00 0.00 0.00 4.35
240 241 2.508891 CGCTGATCCTTCGTGACGC 61.509 63.158 0.00 0.00 0.00 5.19
241 242 2.167861 GCTGATCCTTCGTGACGCC 61.168 63.158 0.00 0.00 0.00 5.68
242 243 1.215382 CTGATCCTTCGTGACGCCA 59.785 57.895 0.00 0.00 0.00 5.69
243 244 1.078759 CTGATCCTTCGTGACGCCAC 61.079 60.000 0.00 0.00 39.86 5.01
244 245 1.810030 GATCCTTCGTGACGCCACC 60.810 63.158 0.00 0.00 40.12 4.61
245 246 3.310860 ATCCTTCGTGACGCCACCC 62.311 63.158 0.00 0.00 40.12 4.61
246 247 4.308458 CCTTCGTGACGCCACCCA 62.308 66.667 0.00 0.00 40.12 4.51
247 248 2.047274 CTTCGTGACGCCACCCAT 60.047 61.111 0.00 0.00 40.12 4.00
248 249 2.358125 TTCGTGACGCCACCCATG 60.358 61.111 0.00 0.00 40.12 3.66
251 252 4.722700 GTGACGCCACCCATGCCT 62.723 66.667 0.00 0.00 37.33 4.75
252 253 3.006133 TGACGCCACCCATGCCTA 61.006 61.111 0.00 0.00 0.00 3.93
253 254 2.203070 GACGCCACCCATGCCTAG 60.203 66.667 0.00 0.00 0.00 3.02
254 255 3.009115 ACGCCACCCATGCCTAGT 61.009 61.111 0.00 0.00 0.00 2.57
255 256 2.272146 CGCCACCCATGCCTAGTT 59.728 61.111 0.00 0.00 0.00 2.24
256 257 1.378514 CGCCACCCATGCCTAGTTT 60.379 57.895 0.00 0.00 0.00 2.66
257 258 0.965363 CGCCACCCATGCCTAGTTTT 60.965 55.000 0.00 0.00 0.00 2.43
258 259 1.266178 GCCACCCATGCCTAGTTTTT 58.734 50.000 0.00 0.00 0.00 1.94
278 279 6.939551 TTTTTCTTAGTAGTTCATCGTCGG 57.060 37.500 0.00 0.00 0.00 4.79
279 280 5.885230 TTTCTTAGTAGTTCATCGTCGGA 57.115 39.130 0.00 0.00 0.00 4.55
280 281 5.481200 TTCTTAGTAGTTCATCGTCGGAG 57.519 43.478 0.00 0.00 0.00 4.63
281 282 4.511527 TCTTAGTAGTTCATCGTCGGAGT 58.488 43.478 0.00 0.00 0.00 3.85
282 283 4.569966 TCTTAGTAGTTCATCGTCGGAGTC 59.430 45.833 0.00 0.00 0.00 3.36
283 284 1.664659 AGTAGTTCATCGTCGGAGTCG 59.335 52.381 0.00 0.00 41.01 4.18
284 285 1.012086 TAGTTCATCGTCGGAGTCGG 58.988 55.000 0.00 0.00 39.90 4.79
285 286 0.675837 AGTTCATCGTCGGAGTCGGA 60.676 55.000 0.00 0.00 39.90 4.55
286 287 0.248134 GTTCATCGTCGGAGTCGGAG 60.248 60.000 0.00 0.00 39.90 4.63
287 288 1.989966 TTCATCGTCGGAGTCGGAGC 61.990 60.000 0.00 0.00 39.90 4.70
288 289 2.124653 ATCGTCGGAGTCGGAGCT 60.125 61.111 0.00 0.00 39.90 4.09
289 290 2.473760 ATCGTCGGAGTCGGAGCTG 61.474 63.158 0.00 0.00 39.90 4.24
290 291 4.838486 CGTCGGAGTCGGAGCTGC 62.838 72.222 0.00 0.00 35.06 5.25
291 292 3.749064 GTCGGAGTCGGAGCTGCA 61.749 66.667 5.91 0.00 36.95 4.41
292 293 2.989253 TCGGAGTCGGAGCTGCAA 60.989 61.111 5.91 0.00 36.95 4.08
293 294 2.185350 CGGAGTCGGAGCTGCAAT 59.815 61.111 5.91 0.00 0.00 3.56
294 295 2.169789 CGGAGTCGGAGCTGCAATG 61.170 63.158 5.91 0.00 0.00 2.82
295 296 1.078848 GGAGTCGGAGCTGCAATGT 60.079 57.895 5.91 0.00 0.00 2.71
296 297 0.674895 GGAGTCGGAGCTGCAATGTT 60.675 55.000 5.91 0.00 0.00 2.71
297 298 1.160137 GAGTCGGAGCTGCAATGTTT 58.840 50.000 5.91 0.00 0.00 2.83
298 299 2.346803 GAGTCGGAGCTGCAATGTTTA 58.653 47.619 5.91 0.00 0.00 2.01
299 300 2.349886 GAGTCGGAGCTGCAATGTTTAG 59.650 50.000 5.91 0.00 0.00 1.85
300 301 2.076863 GTCGGAGCTGCAATGTTTAGT 58.923 47.619 5.91 0.00 0.00 2.24
301 302 3.056107 AGTCGGAGCTGCAATGTTTAGTA 60.056 43.478 5.91 0.00 0.00 1.82
302 303 3.871594 GTCGGAGCTGCAATGTTTAGTAT 59.128 43.478 5.91 0.00 0.00 2.12
303 304 3.871006 TCGGAGCTGCAATGTTTAGTATG 59.129 43.478 5.91 0.00 0.00 2.39
304 305 3.002656 CGGAGCTGCAATGTTTAGTATGG 59.997 47.826 5.91 0.00 0.00 2.74
305 306 4.199310 GGAGCTGCAATGTTTAGTATGGA 58.801 43.478 0.00 0.00 0.00 3.41
306 307 4.823989 GGAGCTGCAATGTTTAGTATGGAT 59.176 41.667 0.00 0.00 0.00 3.41
307 308 5.300286 GGAGCTGCAATGTTTAGTATGGATT 59.700 40.000 0.00 0.00 0.00 3.01
308 309 6.140303 AGCTGCAATGTTTAGTATGGATTG 57.860 37.500 1.02 0.00 0.00 2.67
309 310 5.653769 AGCTGCAATGTTTAGTATGGATTGT 59.346 36.000 1.02 0.00 0.00 2.71
310 311 5.973565 GCTGCAATGTTTAGTATGGATTGTC 59.026 40.000 0.00 0.00 0.00 3.18
311 312 6.183360 GCTGCAATGTTTAGTATGGATTGTCT 60.183 38.462 0.00 0.00 0.00 3.41
312 313 7.087409 TGCAATGTTTAGTATGGATTGTCTG 57.913 36.000 0.00 0.00 0.00 3.51
313 314 6.095300 TGCAATGTTTAGTATGGATTGTCTGG 59.905 38.462 0.00 0.00 0.00 3.86
314 315 6.318648 GCAATGTTTAGTATGGATTGTCTGGA 59.681 38.462 0.00 0.00 0.00 3.86
315 316 7.467811 GCAATGTTTAGTATGGATTGTCTGGAG 60.468 40.741 0.00 0.00 0.00 3.86
316 317 6.620877 TGTTTAGTATGGATTGTCTGGAGT 57.379 37.500 0.00 0.00 0.00 3.85
317 318 6.406370 TGTTTAGTATGGATTGTCTGGAGTG 58.594 40.000 0.00 0.00 0.00 3.51
318 319 6.013725 TGTTTAGTATGGATTGTCTGGAGTGT 60.014 38.462 0.00 0.00 0.00 3.55
319 320 6.620877 TTAGTATGGATTGTCTGGAGTGTT 57.379 37.500 0.00 0.00 0.00 3.32
320 321 4.836825 AGTATGGATTGTCTGGAGTGTTG 58.163 43.478 0.00 0.00 0.00 3.33
321 322 3.795688 ATGGATTGTCTGGAGTGTTGT 57.204 42.857 0.00 0.00 0.00 3.32
322 323 2.849942 TGGATTGTCTGGAGTGTTGTG 58.150 47.619 0.00 0.00 0.00 3.33
323 324 1.537202 GGATTGTCTGGAGTGTTGTGC 59.463 52.381 0.00 0.00 0.00 4.57
324 325 2.498167 GATTGTCTGGAGTGTTGTGCT 58.502 47.619 0.00 0.00 0.00 4.40
325 326 1.667236 TTGTCTGGAGTGTTGTGCTG 58.333 50.000 0.00 0.00 0.00 4.41
326 327 0.815213 TGTCTGGAGTGTTGTGCTGC 60.815 55.000 0.00 0.00 0.00 5.25
327 328 0.815213 GTCTGGAGTGTTGTGCTGCA 60.815 55.000 0.00 0.00 33.40 4.41
328 329 1.947013 CTGGAGTGTTGTGCTGCAG 59.053 57.895 10.11 10.11 43.79 4.41
329 330 2.126417 CTGGAGTGTTGTGCTGCAGC 62.126 60.000 31.89 31.89 43.40 5.25
330 331 1.895707 GGAGTGTTGTGCTGCAGCT 60.896 57.895 36.61 17.15 42.66 4.24
331 332 1.450531 GGAGTGTTGTGCTGCAGCTT 61.451 55.000 36.61 14.81 42.66 3.74
332 333 0.383231 GAGTGTTGTGCTGCAGCTTT 59.617 50.000 36.61 15.48 42.66 3.51
333 334 0.819582 AGTGTTGTGCTGCAGCTTTT 59.180 45.000 36.61 14.18 42.66 2.27
334 335 2.023673 AGTGTTGTGCTGCAGCTTTTA 58.976 42.857 36.61 16.43 42.66 1.52
335 336 2.033801 AGTGTTGTGCTGCAGCTTTTAG 59.966 45.455 36.61 0.70 42.66 1.85
336 337 1.337703 TGTTGTGCTGCAGCTTTTAGG 59.662 47.619 36.61 0.00 42.66 2.69
337 338 0.314935 TTGTGCTGCAGCTTTTAGGC 59.685 50.000 36.61 18.32 42.66 3.93
338 339 0.538057 TGTGCTGCAGCTTTTAGGCT 60.538 50.000 36.61 0.00 44.10 4.58
376 377 3.367992 TGAAAGCGTTGTTCATGCATT 57.632 38.095 0.00 0.00 40.31 3.56
407 408 1.220529 ATAACATGATGGCTCGCACG 58.779 50.000 0.00 0.00 0.00 5.34
421 422 4.022475 GCTCGCACGATACTTTTGAAATC 58.978 43.478 0.00 0.00 0.00 2.17
442 443 8.984891 AAATCAAAACATTAGAATCATCGCAA 57.015 26.923 0.00 0.00 0.00 4.85
498 499 6.405278 AAATTTTCAGGTTCGAAGGATGTT 57.595 33.333 0.00 0.00 0.00 2.71
536 538 4.046938 TCCAACGCTTTTGTTTTGCATA 57.953 36.364 0.00 0.00 0.00 3.14
540 542 5.177327 CCAACGCTTTTGTTTTGCATAATCT 59.823 36.000 0.00 0.00 0.00 2.40
546 548 7.460120 CGCTTTTGTTTTGCATAATCTAAGTCG 60.460 37.037 0.00 0.27 0.00 4.18
567 569 9.941664 AAGTCGCTATTGATCAAGATAAAATTG 57.058 29.630 14.54 0.00 0.00 2.32
577 579 8.306038 TGATCAAGATAAAATTGGACAAACAGG 58.694 33.333 0.00 0.00 0.00 4.00
578 580 7.831691 TCAAGATAAAATTGGACAAACAGGA 57.168 32.000 0.00 0.00 0.00 3.86
579 581 8.421249 TCAAGATAAAATTGGACAAACAGGAT 57.579 30.769 0.00 0.00 0.00 3.24
584 586 6.840780 AAAATTGGACAAACAGGATAGGAG 57.159 37.500 0.00 0.00 0.00 3.69
672 679 1.888512 ACATTTGCGTTGAAGATGCCT 59.111 42.857 0.00 0.00 39.64 4.75
762 769 1.078709 CAACTGTCGGCAATCATCGT 58.921 50.000 0.00 0.00 0.00 3.73
764 771 0.802222 ACTGTCGGCAATCATCGTCG 60.802 55.000 0.00 0.00 0.00 5.12
790 797 1.053424 ACCGCTCCTCACCAGTAAAA 58.947 50.000 0.00 0.00 0.00 1.52
816 823 4.873827 GTGACAATAGAATAACCCAAGCGA 59.126 41.667 0.00 0.00 0.00 4.93
883 893 6.146898 ACAACGTACAAGAAAATAATGCCAC 58.853 36.000 0.00 0.00 0.00 5.01
884 894 6.016610 ACAACGTACAAGAAAATAATGCCACT 60.017 34.615 0.00 0.00 0.00 4.00
1096 1109 3.780173 AGGCGCTGCTCTCCTTCC 61.780 66.667 7.64 0.00 0.00 3.46
1450 1463 1.150135 TCTTGGACCTCTCCTCCAACT 59.850 52.381 0.00 0.00 41.92 3.16
1599 1612 2.271800 CTCAATCTGTCCTACAACCGC 58.728 52.381 0.00 0.00 0.00 5.68
1673 1686 1.302431 TGGACCTGTCGCACAATGG 60.302 57.895 0.00 0.00 0.00 3.16
1746 1759 9.685828 GTCTACATTGATCTCTCCTATAACAAC 57.314 37.037 0.00 0.00 0.00 3.32
1747 1760 8.861086 TCTACATTGATCTCTCCTATAACAACC 58.139 37.037 0.00 0.00 0.00 3.77
1795 1808 3.491598 CTTGACAACCGTGGCCCCT 62.492 63.158 0.00 0.00 0.00 4.79
1973 1986 2.517959 CATTGTTCTGGGTGATGTGGT 58.482 47.619 0.00 0.00 0.00 4.16
2013 2026 3.368531 CCCTGGTGTTCTTCTACTGCTAC 60.369 52.174 0.00 0.00 0.00 3.58
2055 2068 4.740822 AAGGGACATGGTGCGGGC 62.741 66.667 0.00 0.00 0.00 6.13
2113 2126 1.251527 GGACGAGCCTGAGACTCCAA 61.252 60.000 0.00 0.00 0.00 3.53
2114 2127 0.820871 GACGAGCCTGAGACTCCAAT 59.179 55.000 0.00 0.00 0.00 3.16
2211 2224 4.175988 CTCGGGAAGAGCGGGATA 57.824 61.111 0.00 0.00 40.54 2.59
2303 2316 4.561735 TGCAAAGGTTTAAGGAGTTTCG 57.438 40.909 0.00 0.00 0.00 3.46
2306 2319 4.556104 GCAAAGGTTTAAGGAGTTTCGGAC 60.556 45.833 0.00 0.00 0.00 4.79
2350 2363 3.509575 GGTTCAGCATCCCAACATTGTTA 59.490 43.478 0.86 0.00 0.00 2.41
2456 2469 7.848223 TTCATGGTATGTGTTATCAACTGAG 57.152 36.000 0.00 0.00 0.00 3.35
2497 2510 8.850156 GCCTAGTTTACATCATGTTTCCATTAT 58.150 33.333 0.00 0.00 0.00 1.28
2534 2547 5.417894 TCGTAGAACAGTTGACCAGTGATAT 59.582 40.000 0.00 0.00 0.00 1.63
2628 2642 6.020372 ACGATTTTTGTTGTTAACGACGAAA 58.980 32.000 27.30 27.30 40.25 3.46
2678 2692 6.836007 TCTCTAGAATGCTCTTTCAGTCCATA 59.164 38.462 0.00 0.00 32.02 2.74
2686 2700 7.031226 TGCTCTTTCAGTCCATATAAATTGC 57.969 36.000 0.00 0.00 0.00 3.56
2813 2832 9.148879 ACTGCCTCTTATATTTATGTACAGAGT 57.851 33.333 0.33 0.00 0.00 3.24
2866 2885 3.626670 AGTACATCCTCACTGCGTAGTAC 59.373 47.826 5.64 0.00 34.74 2.73
2867 2886 1.400846 ACATCCTCACTGCGTAGTACG 59.599 52.381 18.37 18.37 45.88 3.67
2876 2895 0.800631 TGCGTAGTACGACCTCTGTG 59.199 55.000 26.29 0.00 46.05 3.66
2884 2903 7.243487 CGTAGTACGACCTCTGTGTTTATTTA 58.757 38.462 17.85 0.00 46.05 1.40
2892 2911 7.017319 ACCTCTGTGTTTATTTAAGGCTAGT 57.983 36.000 0.00 0.00 0.00 2.57
2910 2929 4.142403 GCTAGTGTTGCATTGGCTGATTTA 60.142 41.667 0.00 0.00 41.91 1.40
2991 3010 3.616956 AAGATCATGAAAGGAGTCGCA 57.383 42.857 0.00 0.00 0.00 5.10
3006 3025 3.157087 AGTCGCAAATGGGATGTCTTTT 58.843 40.909 3.37 0.00 39.23 2.27
3039 3058 6.620877 TTCAGTCCCAAGAAGTATGTACAT 57.379 37.500 13.93 13.93 0.00 2.29
3255 3274 3.631453 CTACCAAGCACCAGAAGCA 57.369 52.632 0.00 0.00 0.00 3.91
3340 3359 2.673258 TGATTACTGGTAGATCGCCCA 58.327 47.619 6.28 6.28 0.00 5.36
3397 3416 3.133003 CCAGTGGGTCCAGTTCTGTATAG 59.867 52.174 0.00 0.00 0.00 1.31
3402 3421 4.956700 TGGGTCCAGTTCTGTATAGAAGAG 59.043 45.833 1.63 0.00 43.29 2.85
3429 3448 0.599466 CATCCGCTGATGTGCTCGAT 60.599 55.000 9.76 0.00 42.87 3.59
3435 3454 2.012673 GCTGATGTGCTCGATCCTTTT 58.987 47.619 0.00 0.00 0.00 2.27
3442 3461 1.483424 GCTCGATCCTTTTCTCGCCG 61.483 60.000 0.00 0.00 34.94 6.46
3450 3469 1.889530 CTTTTCTCGCCGGGGACTCT 61.890 60.000 18.63 0.00 0.00 3.24
3471 3490 4.161189 TCTGAACAGGAAGGTGAGATGATC 59.839 45.833 1.93 0.00 0.00 2.92
3499 3518 1.300931 AAAGTCGCTCTCGCTTGCA 60.301 52.632 0.00 0.00 34.24 4.08
3628 3647 4.423732 GCGATATGGTTGCAGAAAACATT 58.576 39.130 0.00 0.00 44.06 2.71
3752 3771 3.189618 GGTACCTACCATGTGTTAGCC 57.810 52.381 4.06 0.00 45.73 3.93
3791 3810 4.691175 AGCAGAGCATGTAGTATCTGTTG 58.309 43.478 12.35 0.00 41.00 3.33
3864 3889 2.497675 ACTCAGCGATGAATGTACCACT 59.502 45.455 4.32 0.00 0.00 4.00
3865 3890 3.699538 ACTCAGCGATGAATGTACCACTA 59.300 43.478 4.32 0.00 0.00 2.74
3972 3997 2.417978 TTGCAGACAACTTGGCAGG 58.582 52.632 0.00 0.00 37.59 4.85
4019 4045 8.199449 ACACAAAAATGGAAGCATGATATTAGG 58.801 33.333 0.00 0.00 0.00 2.69
4067 4115 5.660417 CCTCTAGTGTATGATAGGCATGGAT 59.340 44.000 0.00 0.00 37.87 3.41
4136 4184 3.687125 AGATAGGATGGAAGCATGCATG 58.313 45.455 22.70 22.70 37.78 4.06
4142 4190 3.190744 GGATGGAAGCATGCATGATAGTG 59.809 47.826 30.64 4.39 37.78 2.74
4148 4196 3.079578 AGCATGCATGATAGTGGCATAC 58.920 45.455 30.64 7.61 45.81 2.39
4157 4205 6.515832 CATGATAGTGGCATACTGTTGAGTA 58.484 40.000 0.00 0.00 40.65 2.59
4172 4220 3.701532 TGAGTACCTTTTGTTTTGCGG 57.298 42.857 0.00 0.00 0.00 5.69
4213 4261 6.431234 ACTTTTGGTTCCTCAGATATCACAAC 59.569 38.462 5.32 0.38 0.00 3.32
4214 4262 5.762179 TTGGTTCCTCAGATATCACAACT 57.238 39.130 5.32 0.00 0.00 3.16
4223 4271 7.345653 TCCTCAGATATCACAACTCTTGGTATT 59.654 37.037 5.32 0.00 34.12 1.89
4224 4272 8.642432 CCTCAGATATCACAACTCTTGGTATTA 58.358 37.037 5.32 0.00 34.12 0.98
4295 4343 4.857679 TCTAGTGTTCTAAGGACCTCTCC 58.142 47.826 0.00 0.00 36.71 3.71
4297 4345 2.041350 AGTGTTCTAAGGACCTCTCCGA 59.959 50.000 0.00 0.00 42.22 4.55
4298 4346 3.025262 GTGTTCTAAGGACCTCTCCGAT 58.975 50.000 0.00 0.00 42.22 4.18
4299 4347 3.447944 GTGTTCTAAGGACCTCTCCGATT 59.552 47.826 0.00 0.00 42.22 3.34
4300 4348 3.700038 TGTTCTAAGGACCTCTCCGATTC 59.300 47.826 0.00 0.00 42.22 2.52
4301 4349 3.664551 TCTAAGGACCTCTCCGATTCA 57.335 47.619 0.00 0.00 42.22 2.57
4302 4350 3.977312 TCTAAGGACCTCTCCGATTCAA 58.023 45.455 0.00 0.00 42.22 2.69
4303 4351 4.350245 TCTAAGGACCTCTCCGATTCAAA 58.650 43.478 0.00 0.00 42.22 2.69
4304 4352 3.618690 AAGGACCTCTCCGATTCAAAG 57.381 47.619 0.00 0.00 42.22 2.77
4305 4353 1.834263 AGGACCTCTCCGATTCAAAGG 59.166 52.381 0.00 0.00 42.22 3.11
4306 4354 1.831736 GGACCTCTCCGATTCAAAGGA 59.168 52.381 0.00 0.00 34.93 3.36
4307 4355 2.436173 GGACCTCTCCGATTCAAAGGAT 59.564 50.000 0.00 0.00 35.75 3.24
4308 4356 3.118223 GGACCTCTCCGATTCAAAGGATT 60.118 47.826 0.00 0.00 35.75 3.01
4309 4357 4.518249 GACCTCTCCGATTCAAAGGATTT 58.482 43.478 0.00 0.00 40.26 2.17
4310 4358 4.923415 ACCTCTCCGATTCAAAGGATTTT 58.077 39.130 0.00 0.00 35.03 1.82
4311 4359 4.944317 ACCTCTCCGATTCAAAGGATTTTC 59.056 41.667 0.00 0.00 35.03 2.29
4312 4360 5.189180 CCTCTCCGATTCAAAGGATTTTCT 58.811 41.667 0.00 0.00 35.03 2.52
4313 4361 6.070194 ACCTCTCCGATTCAAAGGATTTTCTA 60.070 38.462 0.00 0.00 35.03 2.10
4314 4362 6.995091 CCTCTCCGATTCAAAGGATTTTCTAT 59.005 38.462 0.00 0.00 35.03 1.98
4315 4363 7.500559 CCTCTCCGATTCAAAGGATTTTCTATT 59.499 37.037 0.00 0.00 35.03 1.73
4316 4364 8.438676 TCTCCGATTCAAAGGATTTTCTATTC 57.561 34.615 0.00 0.00 35.03 1.75
4317 4365 7.224753 TCTCCGATTCAAAGGATTTTCTATTCG 59.775 37.037 0.00 0.00 35.03 3.34
4318 4366 6.260050 TCCGATTCAAAGGATTTTCTATTCGG 59.740 38.462 0.00 0.00 35.03 4.30
4319 4367 6.260050 CCGATTCAAAGGATTTTCTATTCGGA 59.740 38.462 0.00 0.00 35.03 4.55
4320 4368 7.041098 CCGATTCAAAGGATTTTCTATTCGGAT 60.041 37.037 0.00 0.00 35.03 4.18
4321 4369 8.345565 CGATTCAAAGGATTTTCTATTCGGATT 58.654 33.333 0.00 0.00 35.03 3.01
4328 4376 8.910351 AGGATTTTCTATTCGGATTTTAGAGG 57.090 34.615 0.00 0.00 0.00 3.69
4329 4377 7.939588 AGGATTTTCTATTCGGATTTTAGAGGG 59.060 37.037 0.00 0.00 0.00 4.30
4330 4378 7.720074 GGATTTTCTATTCGGATTTTAGAGGGT 59.280 37.037 0.00 0.00 0.00 4.34
4331 4379 9.121658 GATTTTCTATTCGGATTTTAGAGGGTT 57.878 33.333 0.00 0.00 0.00 4.11
4332 4380 7.859325 TTTCTATTCGGATTTTAGAGGGTTG 57.141 36.000 0.00 0.00 0.00 3.77
4333 4381 6.555463 TCTATTCGGATTTTAGAGGGTTGT 57.445 37.500 0.00 0.00 0.00 3.32
4334 4382 7.664552 TCTATTCGGATTTTAGAGGGTTGTA 57.335 36.000 0.00 0.00 0.00 2.41
4335 4383 8.081517 TCTATTCGGATTTTAGAGGGTTGTAA 57.918 34.615 0.00 0.00 0.00 2.41
4336 4384 8.711170 TCTATTCGGATTTTAGAGGGTTGTAAT 58.289 33.333 0.00 0.00 0.00 1.89
4337 4385 7.803279 ATTCGGATTTTAGAGGGTTGTAATC 57.197 36.000 0.00 0.00 0.00 1.75
4338 4386 6.302535 TCGGATTTTAGAGGGTTGTAATCA 57.697 37.500 0.00 0.00 0.00 2.57
4339 4387 6.110707 TCGGATTTTAGAGGGTTGTAATCAC 58.889 40.000 0.00 0.00 0.00 3.06
4340 4388 5.296035 CGGATTTTAGAGGGTTGTAATCACC 59.704 44.000 0.00 0.00 0.00 4.02
4341 4389 6.424032 GGATTTTAGAGGGTTGTAATCACCT 58.576 40.000 0.00 0.00 35.67 4.00
4350 4398 4.443598 GGGTTGTAATCACCTCTCTGATCC 60.444 50.000 0.00 0.00 30.12 3.36
4423 4478 3.426787 TCGTGGGGTTGTTTGATATGT 57.573 42.857 0.00 0.00 0.00 2.29
4424 4479 4.554960 TCGTGGGGTTGTTTGATATGTA 57.445 40.909 0.00 0.00 0.00 2.29
4425 4480 4.255301 TCGTGGGGTTGTTTGATATGTAC 58.745 43.478 0.00 0.00 0.00 2.90
4441 4496 9.948964 TTGATATGTACTAGGATCCATCATTTG 57.051 33.333 15.82 0.00 0.00 2.32
4458 4513 7.334921 CCATCATTTGCACTACATTTGGAAAAT 59.665 33.333 0.00 0.00 37.75 1.82
4491 4546 8.224389 TCAACTGAATTCTCTTGACAAAATCA 57.776 30.769 7.05 0.00 34.65 2.57
4552 4607 4.141436 TGGTCATGATAATGTCATCCTGCA 60.141 41.667 0.00 0.00 45.76 4.41
4582 4637 6.764308 TTCTTCCTATTTCAGCATCTTTGG 57.236 37.500 0.00 0.00 0.00 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.179579 GTTCCGCTTGCCGATGCC 62.180 66.667 0.00 0.00 40.02 4.40
1 2 4.179579 GGTTCCGCTTGCCGATGC 62.180 66.667 0.00 0.00 40.02 3.91
8 9 2.593436 AACCACCGGTTCCGCTTG 60.593 61.111 2.97 5.11 43.05 4.01
9 10 2.593436 CAACCACCGGTTCCGCTT 60.593 61.111 2.97 0.00 43.05 4.68
10 11 4.636435 CCAACCACCGGTTCCGCT 62.636 66.667 2.97 0.00 43.05 5.52
29 30 3.718210 CTAGGACGCCTCAACCGCC 62.718 68.421 1.46 0.00 34.61 6.13
30 31 2.202756 CTAGGACGCCTCAACCGC 60.203 66.667 1.46 0.00 34.61 5.68
31 32 2.202756 GCTAGGACGCCTCAACCG 60.203 66.667 1.46 0.00 34.61 4.44
32 33 0.460459 GAAGCTAGGACGCCTCAACC 60.460 60.000 1.46 0.00 34.61 3.77
33 34 0.533032 AGAAGCTAGGACGCCTCAAC 59.467 55.000 1.46 0.00 34.61 3.18
34 35 0.532573 CAGAAGCTAGGACGCCTCAA 59.467 55.000 1.46 0.00 34.61 3.02
35 36 0.612174 ACAGAAGCTAGGACGCCTCA 60.612 55.000 1.46 0.00 34.61 3.86
36 37 0.179124 CACAGAAGCTAGGACGCCTC 60.179 60.000 1.46 0.00 34.61 4.70
37 38 1.608717 CCACAGAAGCTAGGACGCCT 61.609 60.000 3.87 3.87 37.71 5.52
38 39 1.153549 CCACAGAAGCTAGGACGCC 60.154 63.158 0.00 0.00 0.00 5.68
39 40 1.811679 GCCACAGAAGCTAGGACGC 60.812 63.158 0.00 0.00 0.00 5.19
40 41 0.037326 TTGCCACAGAAGCTAGGACG 60.037 55.000 0.00 0.00 0.00 4.79
41 42 1.443802 GTTGCCACAGAAGCTAGGAC 58.556 55.000 0.00 0.00 0.00 3.85
42 43 0.037326 CGTTGCCACAGAAGCTAGGA 60.037 55.000 0.00 0.00 0.00 2.94
43 44 0.037326 TCGTTGCCACAGAAGCTAGG 60.037 55.000 0.00 0.00 0.00 3.02
44 45 1.662629 CATCGTTGCCACAGAAGCTAG 59.337 52.381 0.00 0.00 0.00 3.42
45 46 1.275010 TCATCGTTGCCACAGAAGCTA 59.725 47.619 0.00 0.00 0.00 3.32
46 47 0.035317 TCATCGTTGCCACAGAAGCT 59.965 50.000 0.00 0.00 0.00 3.74
47 48 0.166814 GTCATCGTTGCCACAGAAGC 59.833 55.000 0.00 0.00 0.00 3.86
48 49 0.439985 CGTCATCGTTGCCACAGAAG 59.560 55.000 0.00 0.00 0.00 2.85
49 50 0.948623 CCGTCATCGTTGCCACAGAA 60.949 55.000 0.00 0.00 35.01 3.02
50 51 1.374125 CCGTCATCGTTGCCACAGA 60.374 57.895 0.00 0.00 35.01 3.41
51 52 3.027170 GCCGTCATCGTTGCCACAG 62.027 63.158 0.00 0.00 35.01 3.66
52 53 3.047280 GCCGTCATCGTTGCCACA 61.047 61.111 0.00 0.00 35.01 4.17
53 54 4.147322 CGCCGTCATCGTTGCCAC 62.147 66.667 0.00 0.00 35.01 5.01
54 55 3.657448 ATCGCCGTCATCGTTGCCA 62.657 57.895 0.00 0.00 35.01 4.92
55 56 2.890474 ATCGCCGTCATCGTTGCC 60.890 61.111 0.00 0.00 35.01 4.52
56 57 2.082437 CTCATCGCCGTCATCGTTGC 62.082 60.000 0.00 0.00 35.01 4.17
57 58 1.920051 CTCATCGCCGTCATCGTTG 59.080 57.895 0.00 0.00 35.01 4.10
58 59 1.878522 GCTCATCGCCGTCATCGTT 60.879 57.895 0.00 0.00 35.01 3.85
59 60 2.278857 GCTCATCGCCGTCATCGT 60.279 61.111 0.00 0.00 35.01 3.73
60 61 1.217585 ATTGCTCATCGCCGTCATCG 61.218 55.000 0.00 0.00 38.05 3.84
61 62 0.234106 CATTGCTCATCGCCGTCATC 59.766 55.000 0.00 0.00 38.05 2.92
62 63 0.462581 ACATTGCTCATCGCCGTCAT 60.463 50.000 0.00 0.00 38.05 3.06
63 64 1.079197 ACATTGCTCATCGCCGTCA 60.079 52.632 0.00 0.00 38.05 4.35
64 65 1.638467 GACATTGCTCATCGCCGTC 59.362 57.895 0.00 0.00 38.05 4.79
65 66 2.167219 CGACATTGCTCATCGCCGT 61.167 57.895 0.00 0.00 38.05 5.68
66 67 2.622629 CGACATTGCTCATCGCCG 59.377 61.111 0.00 0.00 38.05 6.46
67 68 1.493950 CTCCGACATTGCTCATCGCC 61.494 60.000 0.00 0.00 38.05 5.54
68 69 1.493950 CCTCCGACATTGCTCATCGC 61.494 60.000 0.00 0.00 39.77 4.58
69 70 1.493950 GCCTCCGACATTGCTCATCG 61.494 60.000 0.00 0.00 35.62 3.84
70 71 1.493950 CGCCTCCGACATTGCTCATC 61.494 60.000 0.00 0.00 36.29 2.92
71 72 1.522355 CGCCTCCGACATTGCTCAT 60.522 57.895 0.00 0.00 36.29 2.90
72 73 2.125552 CGCCTCCGACATTGCTCA 60.126 61.111 0.00 0.00 36.29 4.26
73 74 2.125512 ACGCCTCCGACATTGCTC 60.126 61.111 0.00 0.00 38.29 4.26
74 75 2.434884 CACGCCTCCGACATTGCT 60.435 61.111 0.00 0.00 38.29 3.91
75 76 3.499737 CCACGCCTCCGACATTGC 61.500 66.667 0.00 0.00 38.29 3.56
76 77 3.499737 GCCACGCCTCCGACATTG 61.500 66.667 0.00 0.00 38.29 2.82
77 78 4.778143 GGCCACGCCTCCGACATT 62.778 66.667 0.00 0.00 46.69 2.71
88 89 3.229156 TACCACGACCAAGGCCACG 62.229 63.158 5.01 5.11 0.00 4.94
89 90 1.375523 CTACCACGACCAAGGCCAC 60.376 63.158 5.01 0.00 0.00 5.01
90 91 1.823169 GACTACCACGACCAAGGCCA 61.823 60.000 5.01 0.00 0.00 5.36
91 92 1.079336 GACTACCACGACCAAGGCC 60.079 63.158 0.00 0.00 0.00 5.19
92 93 1.445582 CGACTACCACGACCAAGGC 60.446 63.158 0.00 0.00 0.00 4.35
93 94 1.214589 CCGACTACCACGACCAAGG 59.785 63.158 0.00 0.00 0.00 3.61
94 95 1.445582 GCCGACTACCACGACCAAG 60.446 63.158 0.00 0.00 0.00 3.61
95 96 1.870055 GAGCCGACTACCACGACCAA 61.870 60.000 0.00 0.00 0.00 3.67
96 97 2.282674 AGCCGACTACCACGACCA 60.283 61.111 0.00 0.00 0.00 4.02
97 98 1.593296 AAGAGCCGACTACCACGACC 61.593 60.000 0.00 0.00 0.00 4.79
98 99 0.179169 GAAGAGCCGACTACCACGAC 60.179 60.000 0.00 0.00 0.00 4.34
99 100 0.322277 AGAAGAGCCGACTACCACGA 60.322 55.000 0.00 0.00 0.00 4.35
100 101 0.526662 AAGAAGAGCCGACTACCACG 59.473 55.000 0.00 0.00 0.00 4.94
101 102 1.819903 AGAAGAAGAGCCGACTACCAC 59.180 52.381 0.00 0.00 0.00 4.16
102 103 2.093106 GAGAAGAAGAGCCGACTACCA 58.907 52.381 0.00 0.00 0.00 3.25
103 104 1.406180 GGAGAAGAAGAGCCGACTACC 59.594 57.143 0.00 0.00 0.00 3.18
104 105 1.064357 CGGAGAAGAAGAGCCGACTAC 59.936 57.143 0.00 0.00 46.29 2.73
105 106 1.380524 CGGAGAAGAAGAGCCGACTA 58.619 55.000 0.00 0.00 46.29 2.59
106 107 1.316706 CCGGAGAAGAAGAGCCGACT 61.317 60.000 0.00 0.00 46.29 4.18
107 108 1.139947 CCGGAGAAGAAGAGCCGAC 59.860 63.158 0.00 0.00 46.29 4.79
108 109 2.711922 GCCGGAGAAGAAGAGCCGA 61.712 63.158 5.05 0.00 46.29 5.54
109 110 2.202810 GCCGGAGAAGAAGAGCCG 60.203 66.667 5.05 0.00 43.20 5.52
110 111 2.202810 CGCCGGAGAAGAAGAGCC 60.203 66.667 5.05 0.00 0.00 4.70
111 112 1.807573 CACGCCGGAGAAGAAGAGC 60.808 63.158 13.83 0.00 0.00 4.09
112 113 0.456995 GACACGCCGGAGAAGAAGAG 60.457 60.000 13.83 0.00 0.00 2.85
113 114 1.585006 GACACGCCGGAGAAGAAGA 59.415 57.895 13.83 0.00 0.00 2.87
114 115 1.446272 GGACACGCCGGAGAAGAAG 60.446 63.158 13.83 0.00 0.00 2.85
115 116 1.541310 ATGGACACGCCGGAGAAGAA 61.541 55.000 13.83 0.00 40.66 2.52
116 117 1.982395 ATGGACACGCCGGAGAAGA 60.982 57.895 13.83 0.00 40.66 2.87
117 118 1.811266 CATGGACACGCCGGAGAAG 60.811 63.158 13.83 6.52 40.66 2.85
118 119 2.264480 CATGGACACGCCGGAGAA 59.736 61.111 13.83 0.00 40.66 2.87
119 120 3.770040 CCATGGACACGCCGGAGA 61.770 66.667 13.83 0.00 40.66 3.71
120 121 4.838152 CCCATGGACACGCCGGAG 62.838 72.222 15.22 3.72 40.66 4.63
122 123 4.838152 CTCCCATGGACACGCCGG 62.838 72.222 15.22 0.00 40.66 6.13
123 124 4.082523 ACTCCCATGGACACGCCG 62.083 66.667 15.22 0.00 40.66 6.46
124 125 2.436646 CACTCCCATGGACACGCC 60.437 66.667 15.22 0.00 37.10 5.68
125 126 3.127533 GCACTCCCATGGACACGC 61.128 66.667 15.22 6.88 0.00 5.34
126 127 2.436646 GGCACTCCCATGGACACG 60.437 66.667 15.22 0.00 0.00 4.49
127 128 3.081554 AGGCACTCCCATGGACAC 58.918 61.111 15.22 0.00 35.39 3.67
139 140 0.249489 ACAACAGACAGTCGAGGCAC 60.249 55.000 0.00 0.00 0.00 5.01
140 141 0.464036 AACAACAGACAGTCGAGGCA 59.536 50.000 0.00 0.00 0.00 4.75
141 142 0.861837 CAACAACAGACAGTCGAGGC 59.138 55.000 0.00 0.00 0.00 4.70
142 143 1.860950 CACAACAACAGACAGTCGAGG 59.139 52.381 0.00 0.00 0.00 4.63
143 144 2.809446 TCACAACAACAGACAGTCGAG 58.191 47.619 0.00 0.00 0.00 4.04
144 145 2.951457 TCACAACAACAGACAGTCGA 57.049 45.000 0.00 0.00 0.00 4.20
145 146 2.930040 ACTTCACAACAACAGACAGTCG 59.070 45.455 0.00 0.00 0.00 4.18
146 147 3.000322 CGACTTCACAACAACAGACAGTC 60.000 47.826 0.00 0.00 0.00 3.51
147 148 2.930040 CGACTTCACAACAACAGACAGT 59.070 45.455 0.00 0.00 0.00 3.55
148 149 3.186909 TCGACTTCACAACAACAGACAG 58.813 45.455 0.00 0.00 0.00 3.51
149 150 3.239587 TCGACTTCACAACAACAGACA 57.760 42.857 0.00 0.00 0.00 3.41
150 151 3.544244 GCTTCGACTTCACAACAACAGAC 60.544 47.826 0.00 0.00 0.00 3.51
151 152 2.607635 GCTTCGACTTCACAACAACAGA 59.392 45.455 0.00 0.00 0.00 3.41
152 153 2.286418 GGCTTCGACTTCACAACAACAG 60.286 50.000 0.00 0.00 0.00 3.16
153 154 1.668751 GGCTTCGACTTCACAACAACA 59.331 47.619 0.00 0.00 0.00 3.33
154 155 1.332904 CGGCTTCGACTTCACAACAAC 60.333 52.381 0.00 0.00 35.61 3.32
155 156 0.934496 CGGCTTCGACTTCACAACAA 59.066 50.000 0.00 0.00 35.61 2.83
156 157 1.495584 GCGGCTTCGACTTCACAACA 61.496 55.000 0.00 0.00 35.61 3.33
157 158 1.204312 GCGGCTTCGACTTCACAAC 59.796 57.895 0.00 0.00 35.61 3.32
158 159 1.959226 GGCGGCTTCGACTTCACAA 60.959 57.895 0.00 0.00 39.21 3.33
159 160 2.357034 GGCGGCTTCGACTTCACA 60.357 61.111 0.00 0.00 39.21 3.58
160 161 3.479269 CGGCGGCTTCGACTTCAC 61.479 66.667 7.61 0.00 40.37 3.18
161 162 3.986006 ACGGCGGCTTCGACTTCA 61.986 61.111 13.24 0.00 40.37 3.02
162 163 3.479269 CACGGCGGCTTCGACTTC 61.479 66.667 13.24 0.00 40.37 3.01
180 181 1.004745 CATCATATACCACTGGCCCCC 59.995 57.143 0.00 0.00 0.00 5.40
181 182 1.985159 TCATCATATACCACTGGCCCC 59.015 52.381 0.00 0.00 0.00 5.80
182 183 2.612972 CGTCATCATATACCACTGGCCC 60.613 54.545 0.00 0.00 0.00 5.80
183 184 2.688507 CGTCATCATATACCACTGGCC 58.311 52.381 0.00 0.00 0.00 5.36
184 185 2.069273 GCGTCATCATATACCACTGGC 58.931 52.381 0.00 0.00 0.00 4.85
185 186 2.328473 CGCGTCATCATATACCACTGG 58.672 52.381 0.00 0.00 0.00 4.00
186 187 2.328473 CCGCGTCATCATATACCACTG 58.672 52.381 4.92 0.00 0.00 3.66
187 188 1.272490 CCCGCGTCATCATATACCACT 59.728 52.381 4.92 0.00 0.00 4.00
188 189 1.271379 TCCCGCGTCATCATATACCAC 59.729 52.381 4.92 0.00 0.00 4.16
189 190 1.271379 GTCCCGCGTCATCATATACCA 59.729 52.381 4.92 0.00 0.00 3.25
190 191 1.271379 TGTCCCGCGTCATCATATACC 59.729 52.381 4.92 0.00 0.00 2.73
191 192 2.596452 CTGTCCCGCGTCATCATATAC 58.404 52.381 4.92 0.00 0.00 1.47
192 193 1.544246 CCTGTCCCGCGTCATCATATA 59.456 52.381 4.92 0.00 0.00 0.86
193 194 0.318441 CCTGTCCCGCGTCATCATAT 59.682 55.000 4.92 0.00 0.00 1.78
194 195 1.040893 ACCTGTCCCGCGTCATCATA 61.041 55.000 4.92 0.00 0.00 2.15
195 196 2.359169 ACCTGTCCCGCGTCATCAT 61.359 57.895 4.92 0.00 0.00 2.45
196 197 2.994995 ACCTGTCCCGCGTCATCA 60.995 61.111 4.92 0.00 0.00 3.07
197 198 2.509336 CACCTGTCCCGCGTCATC 60.509 66.667 4.92 0.00 0.00 2.92
198 199 4.082523 CCACCTGTCCCGCGTCAT 62.083 66.667 4.92 0.00 0.00 3.06
200 201 4.309950 AACCACCTGTCCCGCGTC 62.310 66.667 4.92 0.00 0.00 5.19
201 202 4.309950 GAACCACCTGTCCCGCGT 62.310 66.667 4.92 0.00 0.00 6.01
203 204 3.819877 AACGAACCACCTGTCCCGC 62.820 63.158 0.00 0.00 0.00 6.13
204 205 1.666872 GAACGAACCACCTGTCCCG 60.667 63.158 0.00 0.00 0.00 5.14
205 206 1.666872 CGAACGAACCACCTGTCCC 60.667 63.158 0.00 0.00 0.00 4.46
206 207 2.315386 GCGAACGAACCACCTGTCC 61.315 63.158 0.00 0.00 0.00 4.02
207 208 1.300697 AGCGAACGAACCACCTGTC 60.301 57.895 0.00 0.00 0.00 3.51
208 209 1.594293 CAGCGAACGAACCACCTGT 60.594 57.895 0.00 0.00 0.00 4.00
209 210 0.670546 ATCAGCGAACGAACCACCTG 60.671 55.000 0.00 0.00 0.00 4.00
210 211 0.389948 GATCAGCGAACGAACCACCT 60.390 55.000 0.00 0.00 0.00 4.00
211 212 1.359459 GGATCAGCGAACGAACCACC 61.359 60.000 0.00 0.00 0.00 4.61
212 213 0.389948 AGGATCAGCGAACGAACCAC 60.390 55.000 0.00 0.00 0.00 4.16
213 214 0.320374 AAGGATCAGCGAACGAACCA 59.680 50.000 0.00 0.00 0.00 3.67
214 215 1.000145 GAAGGATCAGCGAACGAACC 59.000 55.000 0.00 0.00 0.00 3.62
215 216 0.640768 CGAAGGATCAGCGAACGAAC 59.359 55.000 0.00 0.00 0.00 3.95
216 217 0.242825 ACGAAGGATCAGCGAACGAA 59.757 50.000 7.88 0.00 0.00 3.85
217 218 0.456142 CACGAAGGATCAGCGAACGA 60.456 55.000 7.88 0.00 0.00 3.85
218 219 0.456142 TCACGAAGGATCAGCGAACG 60.456 55.000 7.88 0.00 0.00 3.95
219 220 0.992802 GTCACGAAGGATCAGCGAAC 59.007 55.000 7.88 3.11 0.00 3.95
220 221 0.456142 CGTCACGAAGGATCAGCGAA 60.456 55.000 0.00 0.00 0.00 4.70
221 222 1.136774 CGTCACGAAGGATCAGCGA 59.863 57.895 0.00 0.00 0.00 4.93
222 223 2.508891 GCGTCACGAAGGATCAGCG 61.509 63.158 0.00 0.00 0.00 5.18
223 224 2.167861 GGCGTCACGAAGGATCAGC 61.168 63.158 0.00 0.00 0.00 4.26
224 225 1.078759 GTGGCGTCACGAAGGATCAG 61.079 60.000 3.50 0.00 33.87 2.90
225 226 1.080093 GTGGCGTCACGAAGGATCA 60.080 57.895 3.50 0.00 33.87 2.92
226 227 1.810030 GGTGGCGTCACGAAGGATC 60.810 63.158 14.98 0.00 44.50 3.36
227 228 2.264794 GGTGGCGTCACGAAGGAT 59.735 61.111 14.98 0.00 44.50 3.24
228 229 3.998672 GGGTGGCGTCACGAAGGA 61.999 66.667 14.98 0.00 44.50 3.36
229 230 3.605749 ATGGGTGGCGTCACGAAGG 62.606 63.158 14.98 0.00 44.50 3.46
230 231 2.047274 ATGGGTGGCGTCACGAAG 60.047 61.111 14.98 0.00 44.50 3.79
231 232 2.358125 CATGGGTGGCGTCACGAA 60.358 61.111 14.98 4.82 44.50 3.85
255 256 6.680810 TCCGACGATGAACTACTAAGAAAAA 58.319 36.000 0.00 0.00 0.00 1.94
256 257 6.072286 ACTCCGACGATGAACTACTAAGAAAA 60.072 38.462 0.00 0.00 0.00 2.29
257 258 5.413833 ACTCCGACGATGAACTACTAAGAAA 59.586 40.000 0.00 0.00 0.00 2.52
258 259 4.940046 ACTCCGACGATGAACTACTAAGAA 59.060 41.667 0.00 0.00 0.00 2.52
259 260 4.511527 ACTCCGACGATGAACTACTAAGA 58.488 43.478 0.00 0.00 0.00 2.10
260 261 4.550447 CGACTCCGACGATGAACTACTAAG 60.550 50.000 0.00 0.00 38.22 2.18
261 262 3.308053 CGACTCCGACGATGAACTACTAA 59.692 47.826 0.00 0.00 38.22 2.24
262 263 2.862536 CGACTCCGACGATGAACTACTA 59.137 50.000 0.00 0.00 38.22 1.82
263 264 1.664659 CGACTCCGACGATGAACTACT 59.335 52.381 0.00 0.00 38.22 2.57
264 265 1.267932 CCGACTCCGACGATGAACTAC 60.268 57.143 0.00 0.00 38.22 2.73
265 266 1.012086 CCGACTCCGACGATGAACTA 58.988 55.000 0.00 0.00 38.22 2.24
266 267 0.675837 TCCGACTCCGACGATGAACT 60.676 55.000 0.00 0.00 38.22 3.01
267 268 0.248134 CTCCGACTCCGACGATGAAC 60.248 60.000 0.00 0.00 38.22 3.18
268 269 1.989966 GCTCCGACTCCGACGATGAA 61.990 60.000 0.00 0.00 38.22 2.57
269 270 2.470362 GCTCCGACTCCGACGATGA 61.470 63.158 0.00 0.00 38.22 2.92
270 271 2.024871 GCTCCGACTCCGACGATG 59.975 66.667 0.00 0.00 38.22 3.84
271 272 2.124653 AGCTCCGACTCCGACGAT 60.125 61.111 0.00 0.00 38.22 3.73
272 273 3.125573 CAGCTCCGACTCCGACGA 61.126 66.667 0.00 0.00 38.22 4.20
273 274 4.838486 GCAGCTCCGACTCCGACG 62.838 72.222 0.00 0.00 38.22 5.12
274 275 2.564553 ATTGCAGCTCCGACTCCGAC 62.565 60.000 0.00 0.00 38.22 4.79
275 276 2.351244 ATTGCAGCTCCGACTCCGA 61.351 57.895 0.00 0.00 38.22 4.55
276 277 2.169789 CATTGCAGCTCCGACTCCG 61.170 63.158 0.00 0.00 0.00 4.63
277 278 0.674895 AACATTGCAGCTCCGACTCC 60.675 55.000 0.00 0.00 0.00 3.85
278 279 1.160137 AAACATTGCAGCTCCGACTC 58.840 50.000 0.00 0.00 0.00 3.36
279 280 2.289694 ACTAAACATTGCAGCTCCGACT 60.290 45.455 0.00 0.00 0.00 4.18
280 281 2.076863 ACTAAACATTGCAGCTCCGAC 58.923 47.619 0.00 0.00 0.00 4.79
281 282 2.472695 ACTAAACATTGCAGCTCCGA 57.527 45.000 0.00 0.00 0.00 4.55
282 283 3.002656 CCATACTAAACATTGCAGCTCCG 59.997 47.826 0.00 0.00 0.00 4.63
283 284 4.199310 TCCATACTAAACATTGCAGCTCC 58.801 43.478 0.00 0.00 0.00 4.70
284 285 6.183360 ACAATCCATACTAAACATTGCAGCTC 60.183 38.462 0.00 0.00 0.00 4.09
285 286 5.653769 ACAATCCATACTAAACATTGCAGCT 59.346 36.000 0.00 0.00 0.00 4.24
286 287 5.894807 ACAATCCATACTAAACATTGCAGC 58.105 37.500 0.00 0.00 0.00 5.25
287 288 7.191551 CAGACAATCCATACTAAACATTGCAG 58.808 38.462 0.00 0.00 0.00 4.41
288 289 6.095300 CCAGACAATCCATACTAAACATTGCA 59.905 38.462 0.00 0.00 0.00 4.08
289 290 6.318648 TCCAGACAATCCATACTAAACATTGC 59.681 38.462 0.00 0.00 0.00 3.56
290 291 7.554118 ACTCCAGACAATCCATACTAAACATTG 59.446 37.037 0.00 0.00 0.00 2.82
291 292 7.554118 CACTCCAGACAATCCATACTAAACATT 59.446 37.037 0.00 0.00 0.00 2.71
292 293 7.050377 CACTCCAGACAATCCATACTAAACAT 58.950 38.462 0.00 0.00 0.00 2.71
293 294 6.013725 ACACTCCAGACAATCCATACTAAACA 60.014 38.462 0.00 0.00 0.00 2.83
294 295 6.407202 ACACTCCAGACAATCCATACTAAAC 58.593 40.000 0.00 0.00 0.00 2.01
295 296 6.620877 ACACTCCAGACAATCCATACTAAA 57.379 37.500 0.00 0.00 0.00 1.85
296 297 6.013725 ACAACACTCCAGACAATCCATACTAA 60.014 38.462 0.00 0.00 0.00 2.24
297 298 5.483937 ACAACACTCCAGACAATCCATACTA 59.516 40.000 0.00 0.00 0.00 1.82
298 299 4.287067 ACAACACTCCAGACAATCCATACT 59.713 41.667 0.00 0.00 0.00 2.12
299 300 4.393062 CACAACACTCCAGACAATCCATAC 59.607 45.833 0.00 0.00 0.00 2.39
300 301 4.578871 CACAACACTCCAGACAATCCATA 58.421 43.478 0.00 0.00 0.00 2.74
301 302 3.415212 CACAACACTCCAGACAATCCAT 58.585 45.455 0.00 0.00 0.00 3.41
302 303 2.849942 CACAACACTCCAGACAATCCA 58.150 47.619 0.00 0.00 0.00 3.41
303 304 1.537202 GCACAACACTCCAGACAATCC 59.463 52.381 0.00 0.00 0.00 3.01
304 305 2.225019 CAGCACAACACTCCAGACAATC 59.775 50.000 0.00 0.00 0.00 2.67
305 306 2.224606 CAGCACAACACTCCAGACAAT 58.775 47.619 0.00 0.00 0.00 2.71
306 307 1.667236 CAGCACAACACTCCAGACAA 58.333 50.000 0.00 0.00 0.00 3.18
307 308 0.815213 GCAGCACAACACTCCAGACA 60.815 55.000 0.00 0.00 0.00 3.41
308 309 0.815213 TGCAGCACAACACTCCAGAC 60.815 55.000 0.00 0.00 0.00 3.51
309 310 0.533531 CTGCAGCACAACACTCCAGA 60.534 55.000 0.00 0.00 0.00 3.86
310 311 1.947013 CTGCAGCACAACACTCCAG 59.053 57.895 0.00 0.00 0.00 3.86
311 312 2.188829 GCTGCAGCACAACACTCCA 61.189 57.895 33.36 0.00 41.59 3.86
312 313 1.450531 AAGCTGCAGCACAACACTCC 61.451 55.000 38.24 7.01 45.16 3.85
313 314 0.383231 AAAGCTGCAGCACAACACTC 59.617 50.000 38.24 7.79 45.16 3.51
314 315 0.819582 AAAAGCTGCAGCACAACACT 59.180 45.000 38.24 15.14 45.16 3.55
315 316 2.388121 CTAAAAGCTGCAGCACAACAC 58.612 47.619 38.24 9.36 45.16 3.32
316 317 1.337703 CCTAAAAGCTGCAGCACAACA 59.662 47.619 38.24 18.73 45.16 3.33
317 318 1.932156 GCCTAAAAGCTGCAGCACAAC 60.932 52.381 38.24 17.73 45.16 3.32
318 319 0.314935 GCCTAAAAGCTGCAGCACAA 59.685 50.000 38.24 20.06 45.16 3.33
319 320 0.538057 AGCCTAAAAGCTGCAGCACA 60.538 50.000 38.24 19.41 42.95 4.57
320 321 2.261215 AGCCTAAAAGCTGCAGCAC 58.739 52.632 38.24 18.35 42.95 4.40
321 322 4.828409 AGCCTAAAAGCTGCAGCA 57.172 50.000 38.24 18.49 42.95 4.41
327 328 2.430332 TGCAAACAACAGCCTAAAAGCT 59.570 40.909 0.00 0.00 46.45 3.74
328 329 2.820330 TGCAAACAACAGCCTAAAAGC 58.180 42.857 0.00 0.00 0.00 3.51
329 330 4.619973 TGATGCAAACAACAGCCTAAAAG 58.380 39.130 0.00 0.00 0.00 2.27
330 331 4.662468 TGATGCAAACAACAGCCTAAAA 57.338 36.364 0.00 0.00 0.00 1.52
331 332 4.280425 TCATGATGCAAACAACAGCCTAAA 59.720 37.500 0.00 0.00 31.47 1.85
332 333 3.825585 TCATGATGCAAACAACAGCCTAA 59.174 39.130 0.00 0.00 31.47 2.69
333 334 3.419943 TCATGATGCAAACAACAGCCTA 58.580 40.909 0.00 0.00 31.47 3.93
334 335 2.241160 TCATGATGCAAACAACAGCCT 58.759 42.857 0.00 0.00 31.47 4.58
335 336 2.728690 TCATGATGCAAACAACAGCC 57.271 45.000 0.00 0.00 31.47 4.85
336 337 4.239304 TCAATCATGATGCAAACAACAGC 58.761 39.130 9.46 0.00 31.47 4.40
337 338 6.617741 GCTTTCAATCATGATGCAAACAACAG 60.618 38.462 9.46 0.92 36.23 3.16
338 339 5.177881 GCTTTCAATCATGATGCAAACAACA 59.822 36.000 9.46 0.00 36.23 3.33
339 340 5.614760 GCTTTCAATCATGATGCAAACAAC 58.385 37.500 9.46 0.00 36.23 3.32
340 341 4.386350 CGCTTTCAATCATGATGCAAACAA 59.614 37.500 9.46 0.00 36.07 2.83
341 342 3.921630 CGCTTTCAATCATGATGCAAACA 59.078 39.130 9.46 0.00 36.07 2.83
342 343 3.922240 ACGCTTTCAATCATGATGCAAAC 59.078 39.130 9.46 5.80 36.07 2.93
343 344 4.177165 ACGCTTTCAATCATGATGCAAA 57.823 36.364 9.46 10.09 36.07 3.68
344 345 3.853831 ACGCTTTCAATCATGATGCAA 57.146 38.095 9.46 2.14 36.07 4.08
389 390 0.174617 TCGTGCGAGCCATCATGTTA 59.825 50.000 0.00 0.00 0.00 2.41
392 393 0.786581 GTATCGTGCGAGCCATCATG 59.213 55.000 0.00 0.00 0.00 3.07
421 422 6.032094 AGCTTGCGATGATTCTAATGTTTTG 58.968 36.000 0.00 0.00 0.00 2.44
442 443 2.450476 CCCCTTCTTTTGTGCATAGCT 58.550 47.619 0.00 0.00 0.00 3.32
498 499 5.517054 GCGTTGGATGTTCAACAAGTTTTTA 59.483 36.000 0.00 0.00 45.16 1.52
567 569 2.170817 GTCCCTCCTATCCTGTTTGTCC 59.829 54.545 0.00 0.00 0.00 4.02
577 579 3.949113 GAGGATATGTCGTCCCTCCTATC 59.051 52.174 1.02 0.00 39.33 2.08
578 580 3.970842 GAGGATATGTCGTCCCTCCTAT 58.029 50.000 1.02 0.00 39.33 2.57
579 581 3.436577 GAGGATATGTCGTCCCTCCTA 57.563 52.381 1.02 0.00 39.33 2.94
626 628 2.527497 TCCAATGTCCACGGTAGTGTA 58.473 47.619 0.00 0.00 46.56 2.90
630 632 2.979814 TCATCCAATGTCCACGGTAG 57.020 50.000 0.00 0.00 0.00 3.18
632 634 2.806945 AATCATCCAATGTCCACGGT 57.193 45.000 0.00 0.00 0.00 4.83
672 679 1.066143 GTGCCTGCTCAACCTAGCTAA 60.066 52.381 0.00 0.00 43.19 3.09
764 771 3.311110 TGAGGAGCGGTGGTGACC 61.311 66.667 0.00 0.00 39.14 4.02
790 797 6.128007 CGCTTGGGTTATTCTATTGTCACTTT 60.128 38.462 0.00 0.00 0.00 2.66
808 815 0.902531 TCCTCCTAACTTCGCTTGGG 59.097 55.000 0.00 0.00 0.00 4.12
809 816 2.990066 ATCCTCCTAACTTCGCTTGG 57.010 50.000 0.00 0.00 0.00 3.61
816 823 2.766828 CTCACCGGAATCCTCCTAACTT 59.233 50.000 9.46 0.00 39.93 2.66
883 893 2.012673 GGCACTCATTAGAACTGGCAG 58.987 52.381 14.16 14.16 31.15 4.85
884 894 1.675714 CGGCACTCATTAGAACTGGCA 60.676 52.381 0.00 0.00 31.15 4.92
1011 1021 4.150454 AGGAGGAGGAGCGGGAGG 62.150 72.222 0.00 0.00 0.00 4.30
1450 1463 1.682684 GGAGAGAGCCGTTGAGGGA 60.683 63.158 0.00 0.00 41.48 4.20
1620 1633 1.153628 GGACAGGTTCCCGATGTCG 60.154 63.158 0.00 0.00 43.39 4.35
1673 1686 2.589159 GAATCGGCCCGGAGAAGC 60.589 66.667 0.73 0.00 0.00 3.86
1746 1759 2.190578 GGAATCGGCCCTGACAGG 59.809 66.667 15.15 15.15 34.30 4.00
1747 1760 2.202932 CGGAATCGGCCCTGACAG 60.203 66.667 0.00 0.00 0.00 3.51
1795 1808 2.975799 GTTGCCCAAGAACGCCGA 60.976 61.111 0.00 0.00 0.00 5.54
1973 1986 3.073503 CAGGGCAATGATCAAGATCCCTA 59.926 47.826 20.78 0.00 37.02 3.53
2013 2026 2.675658 TGGGGGAAACTTTCTTCCAG 57.324 50.000 4.84 0.00 45.86 3.86
2055 2068 1.738099 CGACTCTTTGGAGCCGGTG 60.738 63.158 1.90 0.00 40.79 4.94
2064 2077 2.224066 ACAACCAGACCTCGACTCTTTG 60.224 50.000 0.00 0.00 0.00 2.77
2113 2126 1.730487 CGAGGTCGTGCTGCTCTAT 59.270 57.895 0.00 0.00 34.11 1.98
2114 2127 3.188011 CGAGGTCGTGCTGCTCTA 58.812 61.111 0.00 0.00 34.11 2.43
2134 2147 2.241176 ACCTCACTTTCTGGTCCAACAA 59.759 45.455 0.00 0.00 0.00 2.83
2205 2218 3.494398 CCTTGTACACAATCCCTATCCCG 60.494 52.174 0.00 0.00 35.02 5.14
2211 2224 4.844655 AGAACTACCTTGTACACAATCCCT 59.155 41.667 0.00 0.00 35.02 4.20
2303 2316 0.329596 AATGGCCTCAACCTCAGTCC 59.670 55.000 3.32 0.00 0.00 3.85
2306 2319 1.318158 GCCAATGGCCTCAACCTCAG 61.318 60.000 14.47 0.00 44.06 3.35
2331 2344 3.088532 GGTAACAATGTTGGGATGCTGA 58.911 45.455 9.15 0.00 0.00 4.26
2333 2346 3.456380 AGGTAACAATGTTGGGATGCT 57.544 42.857 9.15 0.00 41.41 3.79
2350 2363 1.622725 CCAGTAGTAGGCCCTCAAGGT 60.623 57.143 0.00 0.00 38.26 3.50
2406 2419 2.224843 TGAAGAGAGGCTGCCATTTGAA 60.225 45.455 22.65 0.00 0.00 2.69
2456 2469 2.882137 ACTAGGCATTAGAGAGCTCGAC 59.118 50.000 8.37 6.96 33.39 4.20
2502 2515 5.235616 GGTCAACTGTTCTACGAAATGACAA 59.764 40.000 0.00 0.00 38.09 3.18
2507 2520 4.750098 CACTGGTCAACTGTTCTACGAAAT 59.250 41.667 0.00 0.00 0.00 2.17
2508 2521 4.116961 CACTGGTCAACTGTTCTACGAAA 58.883 43.478 0.00 0.00 0.00 3.46
2512 2525 8.997621 TTAATATCACTGGTCAACTGTTCTAC 57.002 34.615 0.00 0.00 0.00 2.59
2557 2570 5.660460 TGTCGAAGTGCATTACATCAGTAT 58.340 37.500 0.00 0.00 0.00 2.12
2621 2635 2.746362 ACTCCAGGTACTAGTTTCGTCG 59.254 50.000 0.00 0.00 36.02 5.12
2628 2642 4.737578 TCACTTGAACTCCAGGTACTAGT 58.262 43.478 0.00 0.00 36.02 2.57
2760 2779 8.877195 ACACCAGAAAGAAGTAAATTACCTCTA 58.123 33.333 4.85 0.00 29.67 2.43
2783 2802 9.976511 TGTACATAAATATAAGAGGCAGTACAC 57.023 33.333 0.00 0.00 34.84 2.90
2866 2885 4.935808 AGCCTTAAATAAACACAGAGGTCG 59.064 41.667 0.00 0.00 0.00 4.79
2867 2886 7.064728 CACTAGCCTTAAATAAACACAGAGGTC 59.935 40.741 0.00 0.00 0.00 3.85
2876 2895 7.275560 CCAATGCAACACTAGCCTTAAATAAAC 59.724 37.037 0.00 0.00 0.00 2.01
2884 2903 0.890683 GCCAATGCAACACTAGCCTT 59.109 50.000 0.00 0.00 37.47 4.35
2892 2911 6.528537 AGTAATAAATCAGCCAATGCAACA 57.471 33.333 0.00 0.00 41.13 3.33
3006 3025 4.151121 TCTTGGGACTGAATTCATGCAAA 58.849 39.130 8.96 4.18 0.00 3.68
3039 3058 2.528127 TTCGGCCTCAAGTCCCCA 60.528 61.111 0.00 0.00 0.00 4.96
3255 3274 3.790789 GCGACGGTTTCAATGTTTTCAGT 60.791 43.478 0.00 0.00 0.00 3.41
3340 3359 3.118629 TGCATAGTTTCCAAGAGAGCGAT 60.119 43.478 0.00 0.00 0.00 4.58
3397 3416 2.675348 CAGCGGATGGTTTCTTCTCTTC 59.325 50.000 0.00 0.00 0.00 2.87
3429 3448 2.605295 TCCCCGGCGAGAAAAGGA 60.605 61.111 9.30 1.26 0.00 3.36
3435 3454 3.578968 TTCAGAGTCCCCGGCGAGA 62.579 63.158 9.30 0.98 0.00 4.04
3442 3461 0.615850 CCTTCCTGTTCAGAGTCCCC 59.384 60.000 1.00 0.00 0.00 4.81
3450 3469 3.118992 CGATCATCTCACCTTCCTGTTCA 60.119 47.826 0.00 0.00 0.00 3.18
3471 3490 0.985549 GAGCGACTTTGAGTACAGCG 59.014 55.000 0.00 0.00 31.50 5.18
3499 3518 1.344438 TCGCTCGGGATTAGCATGAAT 59.656 47.619 0.00 0.00 40.08 2.57
3628 3647 3.888323 TGCTTGAGCTTTACAACCATCAA 59.112 39.130 4.44 0.00 42.66 2.57
3752 3771 4.392940 TCTGCTCCCAAAGAAGAAGAAAG 58.607 43.478 0.00 0.00 36.66 2.62
3791 3810 5.962433 TCACACAGAGTACTAGCAAATACC 58.038 41.667 0.00 0.00 0.00 2.73
3864 3889 4.566004 CAAGTCTTCAACCGATCAACCTA 58.434 43.478 0.00 0.00 0.00 3.08
3865 3890 3.403038 CAAGTCTTCAACCGATCAACCT 58.597 45.455 0.00 0.00 0.00 3.50
3874 3899 4.925646 GGATTTCATTGCAAGTCTTCAACC 59.074 41.667 4.94 0.00 0.00 3.77
4067 4115 0.966875 GGAACATGCCTGACCATGCA 60.967 55.000 2.65 2.65 44.98 3.96
4136 4184 5.069251 AGGTACTCAACAGTATGCCACTATC 59.931 44.000 0.00 0.00 42.53 2.08
4142 4190 4.760204 ACAAAAGGTACTCAACAGTATGCC 59.240 41.667 0.00 0.00 37.36 4.40
4148 4196 4.499040 CGCAAAACAAAAGGTACTCAACAG 59.501 41.667 0.00 0.00 38.49 3.16
4157 4205 0.688087 TCCCCCGCAAAACAAAAGGT 60.688 50.000 0.00 0.00 0.00 3.50
4172 4220 4.941873 CCAAAAGTACTCAACACTATCCCC 59.058 45.833 0.00 0.00 0.00 4.81
4269 4317 2.099427 GGTCCTTAGAACACTAGAGGCG 59.901 54.545 0.00 0.00 0.00 5.52
4295 4343 7.246674 TCCGAATAGAAAATCCTTTGAATCG 57.753 36.000 0.00 0.00 0.00 3.34
4302 4350 9.343539 CCTCTAAAATCCGAATAGAAAATCCTT 57.656 33.333 0.00 0.00 0.00 3.36
4303 4351 7.939588 CCCTCTAAAATCCGAATAGAAAATCCT 59.060 37.037 0.00 0.00 0.00 3.24
4304 4352 7.720074 ACCCTCTAAAATCCGAATAGAAAATCC 59.280 37.037 0.00 0.00 0.00 3.01
4305 4353 8.678593 ACCCTCTAAAATCCGAATAGAAAATC 57.321 34.615 0.00 0.00 0.00 2.17
4306 4354 8.903820 CAACCCTCTAAAATCCGAATAGAAAAT 58.096 33.333 0.00 0.00 0.00 1.82
4307 4355 7.886446 ACAACCCTCTAAAATCCGAATAGAAAA 59.114 33.333 0.00 0.00 0.00 2.29
4308 4356 7.399634 ACAACCCTCTAAAATCCGAATAGAAA 58.600 34.615 0.00 0.00 0.00 2.52
4309 4357 6.954232 ACAACCCTCTAAAATCCGAATAGAA 58.046 36.000 0.00 0.00 0.00 2.10
4310 4358 6.555463 ACAACCCTCTAAAATCCGAATAGA 57.445 37.500 0.00 0.00 0.00 1.98
4311 4359 8.904099 ATTACAACCCTCTAAAATCCGAATAG 57.096 34.615 0.00 0.00 0.00 1.73
4312 4360 8.487848 TGATTACAACCCTCTAAAATCCGAATA 58.512 33.333 0.00 0.00 0.00 1.75
4313 4361 7.282450 GTGATTACAACCCTCTAAAATCCGAAT 59.718 37.037 0.00 0.00 0.00 3.34
4314 4362 6.596497 GTGATTACAACCCTCTAAAATCCGAA 59.404 38.462 0.00 0.00 0.00 4.30
4315 4363 6.110707 GTGATTACAACCCTCTAAAATCCGA 58.889 40.000 0.00 0.00 0.00 4.55
4316 4364 5.296035 GGTGATTACAACCCTCTAAAATCCG 59.704 44.000 0.00 0.00 0.00 4.18
4317 4365 6.424032 AGGTGATTACAACCCTCTAAAATCC 58.576 40.000 0.00 0.00 33.63 3.01
4318 4366 7.339482 AGAGGTGATTACAACCCTCTAAAATC 58.661 38.462 5.29 0.00 43.33 2.17
4319 4367 7.182930 AGAGAGGTGATTACAACCCTCTAAAAT 59.817 37.037 7.03 0.00 44.37 1.82
4320 4368 6.500751 AGAGAGGTGATTACAACCCTCTAAAA 59.499 38.462 7.03 0.00 44.37 1.52
4321 4369 6.023603 AGAGAGGTGATTACAACCCTCTAAA 58.976 40.000 7.03 0.00 44.37 1.85
4322 4370 5.422331 CAGAGAGGTGATTACAACCCTCTAA 59.578 44.000 7.03 0.00 44.37 2.10
4323 4371 4.956700 CAGAGAGGTGATTACAACCCTCTA 59.043 45.833 7.03 0.00 44.37 2.43
4324 4372 3.772025 CAGAGAGGTGATTACAACCCTCT 59.228 47.826 6.76 6.76 45.87 3.69
4325 4373 3.769844 TCAGAGAGGTGATTACAACCCTC 59.230 47.826 0.00 0.00 38.67 4.30
4326 4374 3.791320 TCAGAGAGGTGATTACAACCCT 58.209 45.455 0.00 0.00 33.63 4.34
4327 4375 4.443598 GGATCAGAGAGGTGATTACAACCC 60.444 50.000 0.00 0.00 37.29 4.11
4328 4376 4.162320 TGGATCAGAGAGGTGATTACAACC 59.838 45.833 0.00 0.00 37.29 3.77
4329 4377 5.344743 TGGATCAGAGAGGTGATTACAAC 57.655 43.478 0.00 0.00 37.29 3.32
4330 4378 6.373005 TTTGGATCAGAGAGGTGATTACAA 57.627 37.500 0.00 0.00 37.29 2.41
4331 4379 5.104776 CCTTTGGATCAGAGAGGTGATTACA 60.105 44.000 0.00 0.00 37.29 2.41
4332 4380 5.129485 TCCTTTGGATCAGAGAGGTGATTAC 59.871 44.000 0.00 0.00 37.29 1.89
4333 4381 5.280499 TCCTTTGGATCAGAGAGGTGATTA 58.720 41.667 0.00 0.00 37.29 1.75
4334 4382 4.107072 TCCTTTGGATCAGAGAGGTGATT 58.893 43.478 0.00 0.00 37.29 2.57
4335 4383 3.729108 TCCTTTGGATCAGAGAGGTGAT 58.271 45.455 0.00 0.00 40.00 3.06
4336 4384 3.190383 TCCTTTGGATCAGAGAGGTGA 57.810 47.619 0.00 0.00 0.00 4.02
4337 4385 4.500499 AATCCTTTGGATCAGAGAGGTG 57.500 45.455 0.00 0.00 42.27 4.00
4338 4386 5.252630 AGAAAATCCTTTGGATCAGAGAGGT 59.747 40.000 0.00 0.00 42.27 3.85
4339 4387 5.753716 AGAAAATCCTTTGGATCAGAGAGG 58.246 41.667 0.00 0.00 42.27 3.69
4340 4388 8.977267 AATAGAAAATCCTTTGGATCAGAGAG 57.023 34.615 0.00 0.00 42.27 3.20
4341 4389 7.712639 CGAATAGAAAATCCTTTGGATCAGAGA 59.287 37.037 0.00 0.00 42.27 3.10
4342 4390 7.041508 CCGAATAGAAAATCCTTTGGATCAGAG 60.042 40.741 0.00 0.00 42.27 3.35
4343 4391 6.767902 CCGAATAGAAAATCCTTTGGATCAGA 59.232 38.462 0.00 0.00 42.27 3.27
4344 4392 6.767902 TCCGAATAGAAAATCCTTTGGATCAG 59.232 38.462 0.00 0.00 42.27 2.90
4423 4478 5.894298 AGTGCAAATGATGGATCCTAGTA 57.106 39.130 14.23 0.00 0.00 1.82
4424 4479 4.785346 AGTGCAAATGATGGATCCTAGT 57.215 40.909 14.23 0.00 0.00 2.57
4425 4480 5.614308 TGTAGTGCAAATGATGGATCCTAG 58.386 41.667 14.23 0.00 0.00 3.02
4441 4496 6.454795 TGGAAAGATTTTCCAAATGTAGTGC 58.545 36.000 18.26 0.00 44.90 4.40
4458 4513 7.173907 GTCAAGAGAATTCAGTTGATGGAAAGA 59.826 37.037 19.62 0.01 31.84 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.