Multiple sequence alignment - TraesCS1A01G238200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G238200 chr1A 100.000 2955 0 0 1 2955 424235788 424238742 0.000000e+00 5457.0
1 TraesCS1A01G238200 chr1A 92.289 2075 150 9 667 2734 423164298 423162227 0.000000e+00 2937.0
2 TraesCS1A01G238200 chr1A 92.293 2076 149 9 664 2730 424272678 424274751 0.000000e+00 2937.0
3 TraesCS1A01G238200 chr1A 92.145 2075 153 9 667 2734 423289809 423287738 0.000000e+00 2920.0
4 TraesCS1A01G238200 chr1A 92.060 2078 148 14 667 2737 423594510 423592443 0.000000e+00 2907.0
5 TraesCS1A01G238200 chr1A 92.066 2067 153 10 675 2734 423227902 423225840 0.000000e+00 2898.0
6 TraesCS1A01G238200 chr1A 91.952 2075 156 10 664 2731 424080323 424082393 0.000000e+00 2896.0
7 TraesCS1A01G238200 chr1A 92.500 2000 139 9 736 2728 423515655 423513660 0.000000e+00 2852.0
8 TraesCS1A01G238200 chr1A 92.500 2000 137 9 736 2728 423462692 423460699 0.000000e+00 2850.0
9 TraesCS1A01G238200 chr1A 92.324 1837 131 9 902 2731 424392568 424394401 0.000000e+00 2603.0
10 TraesCS1A01G238200 chr1A 85.009 567 66 9 664 1218 398893205 398892646 2.570000e-155 558.0
11 TraesCS1A01G238200 chr1A 90.104 384 31 4 234 613 424390809 424391189 2.650000e-135 492.0
12 TraesCS1A01G238200 chr1A 89.514 391 33 5 234 616 423144376 423143986 3.420000e-134 488.0
13 TraesCS1A01G238200 chr1A 89.541 392 29 5 234 613 424079772 424080163 1.230000e-133 486.0
14 TraesCS1A01G238200 chr1A 89.062 384 36 4 234 611 423085692 423085309 3.450000e-129 472.0
15 TraesCS1A01G238200 chr1A 88.491 391 37 5 234 616 423270065 423269675 1.600000e-127 466.0
16 TraesCS1A01G238200 chr1A 88.372 387 32 7 234 616 423164835 423164458 1.250000e-123 453.0
17 TraesCS1A01G238200 chr1A 87.855 387 35 6 234 616 423290347 423289969 7.520000e-121 444.0
18 TraesCS1A01G238200 chr1A 87.436 390 40 6 234 616 423208185 423207798 9.720000e-120 440.0
19 TraesCS1A01G238200 chr1A 87.500 392 28 9 234 616 423516229 423515850 1.630000e-117 433.0
20 TraesCS1A01G238200 chr1A 86.410 390 33 9 234 616 423463263 423462887 2.740000e-110 409.0
21 TraesCS1A01G238200 chr1A 89.062 192 21 0 2744 2935 424243051 424243242 3.810000e-59 239.0
22 TraesCS1A01G238200 chr1A 94.118 51 3 0 621 671 246130775 246130725 8.780000e-11 78.7
23 TraesCS1A01G238200 chr1A 97.059 34 1 0 3 36 136819919 136819886 1.140000e-04 58.4
24 TraesCS1A01G238200 chr1B 87.245 392 38 6 234 613 435811606 435811997 1.260000e-118 436.0
25 TraesCS1A01G238200 chr4A 90.155 193 18 1 2744 2935 316780272 316780464 1.760000e-62 250.0
26 TraesCS1A01G238200 chr4A 89.005 191 21 0 2744 2934 379691374 379691564 1.370000e-58 237.0
27 TraesCS1A01G238200 chr4A 96.000 50 1 1 621 669 5255076 5255125 2.440000e-11 80.5
28 TraesCS1A01G238200 chr4A 92.308 39 1 2 1 39 622724230 622724194 1.000000e-03 54.7
29 TraesCS1A01G238200 chr3A 89.583 192 20 0 2744 2935 262604315 262604124 8.180000e-61 244.0
30 TraesCS1A01G238200 chr3A 89.583 192 20 0 2744 2935 443583111 443583302 8.180000e-61 244.0
31 TraesCS1A01G238200 chr3A 92.683 41 1 2 1 41 156624156 156624194 1.140000e-04 58.4
32 TraesCS1A01G238200 chr3A 92.683 41 1 2 1 41 746518937 746518975 1.140000e-04 58.4
33 TraesCS1A01G238200 chr3A 88.636 44 3 2 1 44 34318015 34317974 5.000000e-03 52.8
34 TraesCS1A01G238200 chr3A 100.000 28 0 0 1 28 95445450 95445477 5.000000e-03 52.8
35 TraesCS1A01G238200 chr6A 88.177 203 23 1 2742 2943 250904849 250905051 1.060000e-59 241.0
36 TraesCS1A01G238200 chr2A 88.832 197 20 2 2740 2935 428800857 428801052 1.060000e-59 241.0
37 TraesCS1A01G238200 chr2A 90.476 42 4 0 1 42 79866762 79866803 4.110000e-04 56.5
38 TraesCS1A01G238200 chr5A 88.601 193 22 0 2743 2935 163021739 163021547 4.920000e-58 235.0
39 TraesCS1A01G238200 chr5A 87.562 201 25 0 2743 2943 184726098 184726298 1.770000e-57 233.0
40 TraesCS1A01G238200 chr5A 100.000 29 0 0 1 29 316642240 316642268 1.000000e-03 54.7
41 TraesCS1A01G238200 chr5A 90.476 42 2 2 1 42 588321215 588321176 1.000000e-03 54.7
42 TraesCS1A01G238200 chr7D 97.959 49 0 1 621 669 440267068 440267021 1.890000e-12 84.2
43 TraesCS1A01G238200 chrUn 96.000 50 2 0 621 670 311160765 311160716 6.790000e-12 82.4
44 TraesCS1A01G238200 chr7B 96.000 50 2 0 621 670 695825088 695825039 6.790000e-12 82.4
45 TraesCS1A01G238200 chr7B 96.000 50 2 0 621 670 695846787 695846738 6.790000e-12 82.4
46 TraesCS1A01G238200 chr3B 97.917 48 0 1 623 669 801289772 801289819 6.790000e-12 82.4
47 TraesCS1A01G238200 chr5B 95.918 49 2 0 621 669 510816300 510816252 2.440000e-11 80.5
48 TraesCS1A01G238200 chr4B 95.918 49 2 0 621 669 25814028 25813980 2.440000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G238200 chr1A 424235788 424238742 2954 False 5457.0 5457 100.0000 1 2955 1 chr1A.!!$F1 2954
1 TraesCS1A01G238200 chr1A 424272678 424274751 2073 False 2937.0 2937 92.2930 664 2730 1 chr1A.!!$F3 2066
2 TraesCS1A01G238200 chr1A 423592443 423594510 2067 True 2907.0 2907 92.0600 667 2737 1 chr1A.!!$R9 2070
3 TraesCS1A01G238200 chr1A 423225840 423227902 2062 True 2898.0 2898 92.0660 675 2734 1 chr1A.!!$R7 2059
4 TraesCS1A01G238200 chr1A 423162227 423164835 2608 True 1695.0 2937 90.3305 234 2734 2 chr1A.!!$R10 2500
5 TraesCS1A01G238200 chr1A 424079772 424082393 2621 False 1691.0 2896 90.7465 234 2731 2 chr1A.!!$F4 2497
6 TraesCS1A01G238200 chr1A 423287738 423290347 2609 True 1682.0 2920 90.0000 234 2734 2 chr1A.!!$R11 2500
7 TraesCS1A01G238200 chr1A 423513660 423516229 2569 True 1642.5 2852 90.0000 234 2728 2 chr1A.!!$R13 2494
8 TraesCS1A01G238200 chr1A 423460699 423463263 2564 True 1629.5 2850 89.4550 234 2728 2 chr1A.!!$R12 2494
9 TraesCS1A01G238200 chr1A 424390809 424394401 3592 False 1547.5 2603 91.2140 234 2731 2 chr1A.!!$F5 2497
10 TraesCS1A01G238200 chr1A 398892646 398893205 559 True 558.0 558 85.0090 664 1218 1 chr1A.!!$R3 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
248 249 0.179000 AGTCGCCAAGATCATCACCC 59.821 55.000 0.00 0.0 0.0 4.61 F
506 517 1.064758 TGAGTAATGAAATGCGCCCCT 60.065 47.619 4.18 0.0 0.0 4.79 F
557 569 1.338011 CCGCCCAAAATGAAACATGCT 60.338 47.619 0.00 0.0 0.0 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 2964 2.527123 TAGGGTTCACGGTGCCCA 60.527 61.111 21.29 8.52 44.69 5.36 R
1874 3024 2.662866 CCACCTCCGTAACCATCTCTA 58.337 52.381 0.00 0.00 0.00 2.43 R
2529 3685 0.545309 TGGAGCTAGCCAGAAGGTGT 60.545 55.000 12.13 0.00 37.19 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 7.841282 CTAATCTAGGACTCCCTCAAATACA 57.159 40.000 0.00 0.00 43.14 2.29
34 35 6.487299 AATCTAGGACTCCCTCAAATACAC 57.513 41.667 0.00 0.00 43.14 2.90
35 36 5.208294 TCTAGGACTCCCTCAAATACACT 57.792 43.478 0.00 0.00 43.14 3.55
36 37 6.337185 TCTAGGACTCCCTCAAATACACTA 57.663 41.667 0.00 0.00 43.14 2.74
37 38 6.923670 TCTAGGACTCCCTCAAATACACTAT 58.076 40.000 0.00 0.00 43.14 2.12
38 39 7.005296 TCTAGGACTCCCTCAAATACACTATC 58.995 42.308 0.00 0.00 43.14 2.08
39 40 5.529289 AGGACTCCCTCAAATACACTATCA 58.471 41.667 0.00 0.00 38.86 2.15
40 41 6.146760 AGGACTCCCTCAAATACACTATCAT 58.853 40.000 0.00 0.00 38.86 2.45
41 42 6.268847 AGGACTCCCTCAAATACACTATCATC 59.731 42.308 0.00 0.00 38.86 2.92
42 43 6.268847 GGACTCCCTCAAATACACTATCATCT 59.731 42.308 0.00 0.00 0.00 2.90
43 44 7.060383 ACTCCCTCAAATACACTATCATCTG 57.940 40.000 0.00 0.00 0.00 2.90
44 45 6.613271 ACTCCCTCAAATACACTATCATCTGT 59.387 38.462 0.00 0.00 0.00 3.41
45 46 7.126421 ACTCCCTCAAATACACTATCATCTGTT 59.874 37.037 0.00 0.00 0.00 3.16
46 47 7.275183 TCCCTCAAATACACTATCATCTGTTG 58.725 38.462 0.00 0.00 0.00 3.33
47 48 6.017605 CCCTCAAATACACTATCATCTGTTGC 60.018 42.308 0.00 0.00 0.00 4.17
48 49 6.539826 CCTCAAATACACTATCATCTGTTGCA 59.460 38.462 0.00 0.00 0.00 4.08
49 50 7.066163 CCTCAAATACACTATCATCTGTTGCAA 59.934 37.037 0.00 0.00 0.00 4.08
50 51 8.510243 TCAAATACACTATCATCTGTTGCAAT 57.490 30.769 0.59 0.00 0.00 3.56
51 52 8.400186 TCAAATACACTATCATCTGTTGCAATG 58.600 33.333 0.59 0.00 0.00 2.82
52 53 4.627611 ACACTATCATCTGTTGCAATGC 57.372 40.909 0.59 0.00 0.00 3.56
53 54 4.011698 ACACTATCATCTGTTGCAATGCA 58.988 39.130 2.72 2.72 36.47 3.96
54 55 4.142534 ACACTATCATCTGTTGCAATGCAC 60.143 41.667 7.72 4.04 38.71 4.57
55 56 2.554806 ATCATCTGTTGCAATGCACG 57.445 45.000 7.72 0.00 38.71 5.34
56 57 0.522626 TCATCTGTTGCAATGCACGG 59.477 50.000 7.72 8.78 38.71 4.94
57 58 0.457166 CATCTGTTGCAATGCACGGG 60.457 55.000 7.72 0.47 38.71 5.28
58 59 2.216750 ATCTGTTGCAATGCACGGGC 62.217 55.000 7.72 0.34 38.71 6.13
68 69 4.695560 GCACGGGCACTTTCTAGT 57.304 55.556 3.77 0.00 40.72 2.57
83 84 6.410540 ACTTTCTAGTGAAGGACAATCATCC 58.589 40.000 11.46 0.00 34.29 3.51
84 85 4.655762 TCTAGTGAAGGACAATCATCCG 57.344 45.455 0.00 0.00 44.22 4.18
85 86 2.698855 AGTGAAGGACAATCATCCGG 57.301 50.000 0.00 0.00 44.22 5.14
86 87 1.909302 AGTGAAGGACAATCATCCGGT 59.091 47.619 0.00 0.00 44.22 5.28
87 88 2.009774 GTGAAGGACAATCATCCGGTG 58.990 52.381 0.00 0.00 44.22 4.94
88 89 1.905894 TGAAGGACAATCATCCGGTGA 59.094 47.619 0.00 5.16 44.22 4.02
90 91 2.918712 AGGACAATCATCCGGTGATC 57.081 50.000 16.56 8.18 46.80 2.92
91 92 2.402564 AGGACAATCATCCGGTGATCT 58.597 47.619 16.56 9.03 46.80 2.75
92 93 2.103771 AGGACAATCATCCGGTGATCTG 59.896 50.000 16.56 16.93 46.80 2.90
93 94 2.103094 GGACAATCATCCGGTGATCTGA 59.897 50.000 16.56 7.63 46.80 3.27
94 95 3.388308 GACAATCATCCGGTGATCTGAG 58.612 50.000 16.56 11.08 46.80 3.35
95 96 2.768527 ACAATCATCCGGTGATCTGAGT 59.231 45.455 16.56 11.53 46.80 3.41
96 97 3.129109 CAATCATCCGGTGATCTGAGTG 58.871 50.000 16.56 11.38 46.80 3.51
97 98 1.852633 TCATCCGGTGATCTGAGTGT 58.147 50.000 0.00 0.00 0.00 3.55
98 99 3.012934 TCATCCGGTGATCTGAGTGTA 57.987 47.619 0.00 0.00 0.00 2.90
99 100 3.361786 TCATCCGGTGATCTGAGTGTAA 58.638 45.455 0.00 0.00 0.00 2.41
100 101 3.767131 TCATCCGGTGATCTGAGTGTAAA 59.233 43.478 0.00 0.00 0.00 2.01
101 102 4.405680 TCATCCGGTGATCTGAGTGTAAAT 59.594 41.667 0.00 0.00 0.00 1.40
102 103 4.123497 TCCGGTGATCTGAGTGTAAATG 57.877 45.455 0.00 0.00 0.00 2.32
103 104 3.118775 TCCGGTGATCTGAGTGTAAATGG 60.119 47.826 0.00 0.00 0.00 3.16
104 105 3.369471 CCGGTGATCTGAGTGTAAATGGT 60.369 47.826 0.00 0.00 0.00 3.55
105 106 3.618594 CGGTGATCTGAGTGTAAATGGTG 59.381 47.826 0.00 0.00 0.00 4.17
106 107 3.375299 GGTGATCTGAGTGTAAATGGTGC 59.625 47.826 0.00 0.00 0.00 5.01
107 108 4.256920 GTGATCTGAGTGTAAATGGTGCT 58.743 43.478 0.00 0.00 0.00 4.40
108 109 4.697352 GTGATCTGAGTGTAAATGGTGCTT 59.303 41.667 0.00 0.00 0.00 3.91
109 110 4.696877 TGATCTGAGTGTAAATGGTGCTTG 59.303 41.667 0.00 0.00 0.00 4.01
110 111 4.085357 TCTGAGTGTAAATGGTGCTTGT 57.915 40.909 0.00 0.00 0.00 3.16
111 112 3.814842 TCTGAGTGTAAATGGTGCTTGTG 59.185 43.478 0.00 0.00 0.00 3.33
112 113 3.814625 TGAGTGTAAATGGTGCTTGTGA 58.185 40.909 0.00 0.00 0.00 3.58
113 114 3.814842 TGAGTGTAAATGGTGCTTGTGAG 59.185 43.478 0.00 0.00 0.00 3.51
114 115 3.815401 GAGTGTAAATGGTGCTTGTGAGT 59.185 43.478 0.00 0.00 0.00 3.41
115 116 4.968259 AGTGTAAATGGTGCTTGTGAGTA 58.032 39.130 0.00 0.00 0.00 2.59
116 117 5.373222 AGTGTAAATGGTGCTTGTGAGTAA 58.627 37.500 0.00 0.00 0.00 2.24
117 118 6.003950 AGTGTAAATGGTGCTTGTGAGTAAT 58.996 36.000 0.00 0.00 0.00 1.89
118 119 6.072508 AGTGTAAATGGTGCTTGTGAGTAATG 60.073 38.462 0.00 0.00 0.00 1.90
119 120 4.789012 AAATGGTGCTTGTGAGTAATGG 57.211 40.909 0.00 0.00 0.00 3.16
120 121 2.198827 TGGTGCTTGTGAGTAATGGG 57.801 50.000 0.00 0.00 0.00 4.00
121 122 0.811281 GGTGCTTGTGAGTAATGGGC 59.189 55.000 0.00 0.00 0.00 5.36
122 123 0.811281 GTGCTTGTGAGTAATGGGCC 59.189 55.000 0.00 0.00 0.00 5.80
123 124 0.676466 TGCTTGTGAGTAATGGGCCG 60.676 55.000 0.00 0.00 0.00 6.13
124 125 1.993369 GCTTGTGAGTAATGGGCCGC 61.993 60.000 0.00 0.00 0.00 6.53
125 126 0.676466 CTTGTGAGTAATGGGCCGCA 60.676 55.000 0.00 0.00 0.00 5.69
126 127 0.250945 TTGTGAGTAATGGGCCGCAA 60.251 50.000 0.00 0.00 0.00 4.85
127 128 0.958382 TGTGAGTAATGGGCCGCAAC 60.958 55.000 0.00 0.00 0.00 4.17
128 129 1.743623 TGAGTAATGGGCCGCAACG 60.744 57.895 0.00 0.00 0.00 4.10
129 130 3.108357 GAGTAATGGGCCGCAACGC 62.108 63.158 0.00 0.00 0.00 4.84
139 140 4.025401 CGCAACGCCCTGTCCAAC 62.025 66.667 0.00 0.00 0.00 3.77
140 141 3.670377 GCAACGCCCTGTCCAACC 61.670 66.667 0.00 0.00 0.00 3.77
141 142 3.353836 CAACGCCCTGTCCAACCG 61.354 66.667 0.00 0.00 0.00 4.44
146 147 3.322466 CCCTGTCCAACCGCTCCT 61.322 66.667 0.00 0.00 0.00 3.69
147 148 2.046892 CCTGTCCAACCGCTCCTG 60.047 66.667 0.00 0.00 0.00 3.86
148 149 2.583441 CCTGTCCAACCGCTCCTGA 61.583 63.158 0.00 0.00 0.00 3.86
149 150 1.079543 CTGTCCAACCGCTCCTGAG 60.080 63.158 0.00 0.00 0.00 3.35
158 159 3.882025 GCTCCTGAGCGAAAGTGG 58.118 61.111 2.98 0.00 45.29 4.00
159 160 1.293498 GCTCCTGAGCGAAAGTGGA 59.707 57.895 2.98 0.00 45.29 4.02
160 161 0.739112 GCTCCTGAGCGAAAGTGGAG 60.739 60.000 2.98 0.00 45.29 3.86
161 162 0.605589 CTCCTGAGCGAAAGTGGAGT 59.394 55.000 0.00 0.00 39.39 3.85
162 163 0.318441 TCCTGAGCGAAAGTGGAGTG 59.682 55.000 0.00 0.00 0.00 3.51
163 164 0.318441 CCTGAGCGAAAGTGGAGTGA 59.682 55.000 0.00 0.00 0.00 3.41
164 165 1.270305 CCTGAGCGAAAGTGGAGTGAA 60.270 52.381 0.00 0.00 0.00 3.18
165 166 2.483876 CTGAGCGAAAGTGGAGTGAAA 58.516 47.619 0.00 0.00 0.00 2.69
166 167 2.478134 CTGAGCGAAAGTGGAGTGAAAG 59.522 50.000 0.00 0.00 0.00 2.62
167 168 1.195674 GAGCGAAAGTGGAGTGAAAGC 59.804 52.381 0.00 0.00 0.00 3.51
168 169 1.202698 AGCGAAAGTGGAGTGAAAGCT 60.203 47.619 0.00 0.00 0.00 3.74
169 170 1.604278 GCGAAAGTGGAGTGAAAGCTT 59.396 47.619 0.00 0.00 0.00 3.74
170 171 2.603173 GCGAAAGTGGAGTGAAAGCTTG 60.603 50.000 0.00 0.00 0.00 4.01
171 172 2.603173 CGAAAGTGGAGTGAAAGCTTGC 60.603 50.000 0.00 0.00 0.00 4.01
172 173 2.355010 AAGTGGAGTGAAAGCTTGCT 57.645 45.000 5.89 1.99 0.00 3.91
173 174 1.889545 AGTGGAGTGAAAGCTTGCTC 58.110 50.000 5.89 11.05 0.00 4.26
174 175 0.877743 GTGGAGTGAAAGCTTGCTCC 59.122 55.000 25.83 25.83 45.64 4.70
175 176 3.329300 GGAGTGAAAGCTTGCTCCA 57.671 52.632 26.81 11.64 45.00 3.86
176 177 1.609208 GGAGTGAAAGCTTGCTCCAA 58.391 50.000 26.81 0.00 45.00 3.53
177 178 1.538950 GGAGTGAAAGCTTGCTCCAAG 59.461 52.381 26.81 0.74 45.00 3.61
178 179 2.498167 GAGTGAAAGCTTGCTCCAAGA 58.502 47.619 5.89 0.00 43.42 3.02
179 180 3.080319 GAGTGAAAGCTTGCTCCAAGAT 58.920 45.455 5.89 0.00 43.42 2.40
180 181 4.256920 GAGTGAAAGCTTGCTCCAAGATA 58.743 43.478 5.89 0.00 43.42 1.98
181 182 4.006319 AGTGAAAGCTTGCTCCAAGATAC 58.994 43.478 5.89 0.00 43.42 2.24
182 183 3.127721 GTGAAAGCTTGCTCCAAGATACC 59.872 47.826 5.89 0.00 43.42 2.73
183 184 3.244875 TGAAAGCTTGCTCCAAGATACCA 60.245 43.478 5.89 2.17 43.42 3.25
184 185 3.659183 AAGCTTGCTCCAAGATACCAT 57.341 42.857 0.00 0.00 43.42 3.55
185 186 3.205784 AGCTTGCTCCAAGATACCATC 57.794 47.619 9.01 0.00 43.42 3.51
186 187 1.869767 GCTTGCTCCAAGATACCATCG 59.130 52.381 9.01 0.00 43.42 3.84
187 188 2.743183 GCTTGCTCCAAGATACCATCGT 60.743 50.000 9.01 0.00 43.42 3.73
188 189 2.890808 TGCTCCAAGATACCATCGTC 57.109 50.000 0.00 0.00 0.00 4.20
189 190 2.107366 TGCTCCAAGATACCATCGTCA 58.893 47.619 0.00 0.00 0.00 4.35
190 191 2.700371 TGCTCCAAGATACCATCGTCAT 59.300 45.455 0.00 0.00 0.00 3.06
191 192 3.134623 TGCTCCAAGATACCATCGTCATT 59.865 43.478 0.00 0.00 0.00 2.57
192 193 4.130118 GCTCCAAGATACCATCGTCATTT 58.870 43.478 0.00 0.00 0.00 2.32
193 194 4.576463 GCTCCAAGATACCATCGTCATTTT 59.424 41.667 0.00 0.00 0.00 1.82
194 195 5.277538 GCTCCAAGATACCATCGTCATTTTC 60.278 44.000 0.00 0.00 0.00 2.29
195 196 5.123227 TCCAAGATACCATCGTCATTTTCC 58.877 41.667 0.00 0.00 0.00 3.13
196 197 4.881273 CCAAGATACCATCGTCATTTTCCA 59.119 41.667 0.00 0.00 0.00 3.53
197 198 5.356751 CCAAGATACCATCGTCATTTTCCAA 59.643 40.000 0.00 0.00 0.00 3.53
198 199 6.458751 CCAAGATACCATCGTCATTTTCCAAG 60.459 42.308 0.00 0.00 0.00 3.61
199 200 5.989477 AGATACCATCGTCATTTTCCAAGA 58.011 37.500 0.00 0.00 0.00 3.02
200 201 6.051717 AGATACCATCGTCATTTTCCAAGAG 58.948 40.000 0.00 0.00 0.00 2.85
201 202 4.286297 ACCATCGTCATTTTCCAAGAGA 57.714 40.909 0.00 0.00 0.00 3.10
202 203 4.848357 ACCATCGTCATTTTCCAAGAGAT 58.152 39.130 0.00 0.00 0.00 2.75
203 204 4.637534 ACCATCGTCATTTTCCAAGAGATG 59.362 41.667 0.00 0.00 35.38 2.90
219 220 7.885297 CCAAGAGATGGTTTTGAAGTAATTCA 58.115 34.615 0.56 0.56 44.85 2.57
220 221 8.025445 CCAAGAGATGGTTTTGAAGTAATTCAG 58.975 37.037 5.67 0.00 44.85 3.02
221 222 7.693969 AGAGATGGTTTTGAAGTAATTCAGG 57.306 36.000 5.67 0.00 31.87 3.86
222 223 7.234355 AGAGATGGTTTTGAAGTAATTCAGGT 58.766 34.615 5.67 0.00 31.87 4.00
223 224 7.725844 AGAGATGGTTTTGAAGTAATTCAGGTT 59.274 33.333 5.67 0.00 31.87 3.50
224 225 7.661040 AGATGGTTTTGAAGTAATTCAGGTTG 58.339 34.615 5.67 0.00 31.87 3.77
225 226 5.596845 TGGTTTTGAAGTAATTCAGGTTGC 58.403 37.500 5.67 0.00 31.87 4.17
226 227 5.127845 TGGTTTTGAAGTAATTCAGGTTGCA 59.872 36.000 5.67 0.00 31.87 4.08
227 228 6.183360 TGGTTTTGAAGTAATTCAGGTTGCAT 60.183 34.615 5.67 0.00 31.87 3.96
228 229 6.366061 GGTTTTGAAGTAATTCAGGTTGCATC 59.634 38.462 5.67 0.00 31.87 3.91
229 230 6.647334 TTTGAAGTAATTCAGGTTGCATCA 57.353 33.333 5.67 0.00 31.87 3.07
230 231 5.885230 TGAAGTAATTCAGGTTGCATCAG 57.115 39.130 0.56 0.00 0.00 2.90
231 232 5.316167 TGAAGTAATTCAGGTTGCATCAGT 58.684 37.500 0.56 0.00 0.00 3.41
232 233 5.412594 TGAAGTAATTCAGGTTGCATCAGTC 59.587 40.000 0.56 0.00 0.00 3.51
248 249 0.179000 AGTCGCCAAGATCATCACCC 59.821 55.000 0.00 0.00 0.00 4.61
276 277 1.762858 TTGGGCCGGGTGATCGATA 60.763 57.895 2.18 0.00 0.00 2.92
289 290 6.348458 CGGGTGATCGATACAAAAATATGCAT 60.348 38.462 3.79 3.79 0.00 3.96
332 333 1.488957 CTCAACGAACGCAGCACTC 59.511 57.895 0.00 0.00 0.00 3.51
342 343 2.009774 ACGCAGCACTCAAATCCATAC 58.990 47.619 0.00 0.00 0.00 2.39
431 435 3.490348 ACTTCTTGGCTTACACATGCTT 58.510 40.909 0.00 0.00 0.00 3.91
436 440 1.167851 GGCTTACACATGCTTGCTCA 58.832 50.000 0.00 0.00 0.00 4.26
464 468 7.276658 CAGGAGATTAGCATTATCATTACCGAC 59.723 40.741 0.00 0.00 0.00 4.79
506 517 1.064758 TGAGTAATGAAATGCGCCCCT 60.065 47.619 4.18 0.00 0.00 4.79
511 522 4.129148 GAAATGCGCCCCTCCCCT 62.129 66.667 4.18 0.00 0.00 4.79
557 569 1.338011 CCGCCCAAAATGAAACATGCT 60.338 47.619 0.00 0.00 0.00 3.79
613 626 6.536731 GTCAAATATCAGGTGACTATGCAG 57.463 41.667 0.00 0.00 40.21 4.41
616 629 7.875041 GTCAAATATCAGGTGACTATGCAGTAT 59.125 37.037 0.00 0.00 40.21 2.12
618 631 7.544804 AATATCAGGTGACTATGCAGTATCA 57.455 36.000 0.00 0.00 40.21 2.15
619 632 4.926140 TCAGGTGACTATGCAGTATCAG 57.074 45.455 0.00 0.00 40.21 2.90
621 634 3.386078 CAGGTGACTATGCAGTATCAGGT 59.614 47.826 0.00 0.00 40.21 4.00
622 635 3.386078 AGGTGACTATGCAGTATCAGGTG 59.614 47.826 0.00 0.00 40.61 4.00
623 636 3.133003 GGTGACTATGCAGTATCAGGTGT 59.867 47.826 0.00 0.00 34.21 4.16
624 637 4.341235 GGTGACTATGCAGTATCAGGTGTA 59.659 45.833 0.00 0.00 34.21 2.90
626 639 5.923114 GTGACTATGCAGTATCAGGTGTATG 59.077 44.000 0.00 0.00 34.21 2.39
628 641 3.843893 ATGCAGTATCAGGTGTATGCA 57.156 42.857 0.00 0.00 46.50 3.96
629 642 2.905075 TGCAGTATCAGGTGTATGCAC 58.095 47.619 5.22 5.22 44.53 4.57
630 643 2.235898 TGCAGTATCAGGTGTATGCACA 59.764 45.455 16.11 0.00 46.95 4.57
651 664 5.814188 CACATGTATATGAGTGCTTGTGTCT 59.186 40.000 6.45 0.00 36.12 3.41
653 666 5.405935 TGTATATGAGTGCTTGTGTCTGT 57.594 39.130 0.00 0.00 0.00 3.41
655 668 6.330278 TGTATATGAGTGCTTGTGTCTGTAC 58.670 40.000 0.00 0.00 0.00 2.90
657 670 3.097877 TGAGTGCTTGTGTCTGTACTG 57.902 47.619 0.00 0.00 29.71 2.74
660 673 3.657634 AGTGCTTGTGTCTGTACTGATG 58.342 45.455 5.69 0.00 0.00 3.07
661 674 3.070159 AGTGCTTGTGTCTGTACTGATGT 59.930 43.478 5.69 0.00 0.00 3.06
662 675 3.809832 GTGCTTGTGTCTGTACTGATGTT 59.190 43.478 5.69 0.00 0.00 2.71
665 787 6.018262 GTGCTTGTGTCTGTACTGATGTTAAA 60.018 38.462 5.69 0.00 0.00 1.52
920 2058 6.906157 TCCGAGGATCCTTATTAATTACGT 57.094 37.500 17.42 0.00 0.00 3.57
943 2081 6.635239 CGTCGAATTGTAAAAAGGAAACACAT 59.365 34.615 0.00 0.00 0.00 3.21
949 2087 9.883142 AATTGTAAAAAGGAAACACATCAAAGA 57.117 25.926 0.00 0.00 0.00 2.52
1135 2282 5.277828 GGTGTTCTGTGTTTGATGGTACTTC 60.278 44.000 0.00 0.00 0.00 3.01
1142 2289 4.396166 GTGTTTGATGGTACTTCTGATGGG 59.604 45.833 0.00 0.00 0.00 4.00
1372 2521 4.072131 GCCAGAGAAGTGTTTCAACCATA 58.928 43.478 0.00 0.00 35.70 2.74
1426 2575 7.573968 ATGCAAGTATCTTTTTCCTCATACC 57.426 36.000 0.00 0.00 0.00 2.73
1506 2656 6.095021 GCTCGTCCCCTTATTTGAAAGTTATT 59.905 38.462 0.00 0.00 0.00 1.40
1554 2704 7.422465 AGTGTTATTTAACAATGGCATGGAT 57.578 32.000 9.33 0.00 46.54 3.41
1584 2734 8.934023 AGAGGTGTTTTCCTTGTGATTTTATA 57.066 30.769 0.00 0.00 38.02 0.98
1613 2763 5.815222 CCATTACAATTCTGTCATGGTACGA 59.185 40.000 9.39 0.00 46.10 3.43
1686 2836 6.237901 TCTTGTGTTTGTATTAGCACTCCAT 58.762 36.000 0.00 0.00 33.44 3.41
1689 2839 6.000840 TGTGTTTGTATTAGCACTCCATTGA 58.999 36.000 0.00 0.00 33.44 2.57
1693 2843 7.176515 TGTTTGTATTAGCACTCCATTGATGTT 59.823 33.333 0.00 0.00 0.00 2.71
1814 2964 1.933853 GAAGCTAACATTGGCGTCGAT 59.066 47.619 0.00 0.00 39.88 3.59
1915 3065 0.902984 ACCTGCCGTGATGGTCACTA 60.903 55.000 8.30 0.00 44.85 2.74
1944 3094 7.019774 TGCATCAGATAATTGTAGCAAGAAC 57.980 36.000 0.00 0.00 0.00 3.01
1953 3103 6.594788 AATTGTAGCAAGAACATGACCAAT 57.405 33.333 0.00 0.00 0.00 3.16
1959 3109 9.237187 TGTAGCAAGAACATGACCAATAATAAA 57.763 29.630 0.00 0.00 0.00 1.40
1963 3113 9.076596 GCAAGAACATGACCAATAATAAAGTTC 57.923 33.333 0.00 0.00 34.61 3.01
2032 3182 9.875691 AAGCTGGAATAATTTAAATCCAACTTC 57.124 29.630 14.38 8.15 41.96 3.01
2070 3220 8.737175 ACTCTTTGTACTTGAACTCGTATCATA 58.263 33.333 0.00 0.00 0.00 2.15
2199 3353 6.469410 ACTATGATTCCAACCAGAACGTTTA 58.531 36.000 0.46 0.00 0.00 2.01
2209 3363 7.333423 TCCAACCAGAACGTTTATCATCTAAAG 59.667 37.037 0.46 0.00 0.00 1.85
2212 3366 7.553334 ACCAGAACGTTTATCATCTAAAGCTA 58.447 34.615 0.46 0.00 0.00 3.32
2224 3378 6.552629 TCATCTAAAGCTAGAACTACACACG 58.447 40.000 0.00 0.00 37.70 4.49
2232 3386 5.524646 AGCTAGAACTACACACGAGATAGTC 59.475 44.000 0.00 0.00 0.00 2.59
2235 3389 5.736813 AGAACTACACACGAGATAGTCTCT 58.263 41.667 5.53 0.01 41.26 3.10
2268 3423 5.499004 ACTTAACCATACCTTCTGCAGAA 57.501 39.130 26.87 26.87 0.00 3.02
2301 3456 7.798596 ATGGACTTGAATAATTCTGTAGCAG 57.201 36.000 0.00 0.00 0.00 4.24
2311 3466 7.976135 ATAATTCTGTAGCAGACAATCATCC 57.024 36.000 0.00 0.00 40.46 3.51
2347 3502 9.381038 AGAGTTAGGATAGCTGGAAAACATATA 57.619 33.333 0.00 0.00 29.90 0.86
2358 3513 9.586732 AGCTGGAAAACATATAATGGCTTATTA 57.413 29.630 0.00 0.00 35.79 0.98
2408 3563 1.764851 TGCACACAAAATAAGCGCAC 58.235 45.000 11.47 0.00 0.00 5.34
2432 3587 6.213195 ACACCAATGGTCCATCAAACATATTT 59.787 34.615 0.00 0.00 31.02 1.40
2467 3623 4.634199 ACAAGCTGCAGCATATTTTGTTT 58.366 34.783 38.24 18.79 45.16 2.83
2470 3626 5.902613 AGCTGCAGCATATTTTGTTTCTA 57.097 34.783 38.24 0.00 45.16 2.10
2501 3657 3.432046 CCACAACAATGTTTGCCCTTCTT 60.432 43.478 0.00 0.00 37.82 2.52
2522 3678 4.677673 TCGATGAAGGATGTGTGATGAT 57.322 40.909 0.00 0.00 0.00 2.45
2529 3685 1.655484 GATGTGTGATGATGACGGCA 58.345 50.000 0.00 0.00 0.00 5.69
2536 3692 1.009829 GATGATGACGGCACACCTTC 58.990 55.000 0.00 0.00 34.78 3.46
2598 3754 9.574516 GTCTATGGACCTGGATGTAAATTTTAT 57.425 33.333 0.00 0.00 36.53 1.40
2642 3798 2.084546 GACAGTTGGTGAATACTGCCC 58.915 52.381 0.00 0.00 44.34 5.36
2643 3799 1.705186 ACAGTTGGTGAATACTGCCCT 59.295 47.619 0.00 0.00 44.34 5.19
2649 3805 3.178046 TGGTGAATACTGCCCTAGTTGA 58.822 45.455 0.00 0.00 40.89 3.18
2650 3806 3.197766 TGGTGAATACTGCCCTAGTTGAG 59.802 47.826 0.00 0.00 40.89 3.02
2718 3875 8.961294 AAAGGAAAGTATCTCTCTCATGATTG 57.039 34.615 0.00 0.00 0.00 2.67
2721 3878 8.637986 AGGAAAGTATCTCTCTCATGATTGTAC 58.362 37.037 0.00 0.00 0.00 2.90
2722 3879 8.417106 GGAAAGTATCTCTCTCATGATTGTACA 58.583 37.037 0.00 0.00 0.00 2.90
2731 3888 8.347004 TCTCTCATGATTGTACATATCTCTCC 57.653 38.462 14.81 0.00 0.00 3.71
2734 3891 8.583296 TCTCATGATTGTACATATCTCTCCTTG 58.417 37.037 14.81 7.08 0.00 3.61
2735 3892 8.255111 TCATGATTGTACATATCTCTCCTTGT 57.745 34.615 14.81 0.00 0.00 3.16
2736 3893 9.367160 TCATGATTGTACATATCTCTCCTTGTA 57.633 33.333 14.81 0.00 0.00 2.41
2737 3894 9.636879 CATGATTGTACATATCTCTCCTTGTAG 57.363 37.037 14.81 0.00 0.00 2.74
2738 3895 8.183104 TGATTGTACATATCTCTCCTTGTAGG 57.817 38.462 14.81 0.00 36.46 3.18
2739 3896 8.004801 TGATTGTACATATCTCTCCTTGTAGGA 58.995 37.037 14.81 0.00 43.43 2.94
2740 3897 8.783660 ATTGTACATATCTCTCCTTGTAGGAA 57.216 34.615 0.00 0.00 45.28 3.36
2741 3898 8.603898 TTGTACATATCTCTCCTTGTAGGAAA 57.396 34.615 0.00 0.00 45.28 3.13
2742 3899 8.239038 TGTACATATCTCTCCTTGTAGGAAAG 57.761 38.462 0.00 0.00 45.28 2.62
2743 3900 7.839705 TGTACATATCTCTCCTTGTAGGAAAGT 59.160 37.037 0.00 0.00 45.28 2.66
2744 3901 7.118496 ACATATCTCTCCTTGTAGGAAAGTG 57.882 40.000 0.00 0.00 45.28 3.16
2745 3902 6.670027 ACATATCTCTCCTTGTAGGAAAGTGT 59.330 38.462 0.00 0.00 45.28 3.55
2746 3903 5.669164 ATCTCTCCTTGTAGGAAAGTGTC 57.331 43.478 0.00 0.00 45.28 3.67
2747 3904 3.506455 TCTCTCCTTGTAGGAAAGTGTCG 59.494 47.826 0.00 0.00 45.28 4.35
2748 3905 2.561419 TCTCCTTGTAGGAAAGTGTCGG 59.439 50.000 0.00 0.00 45.28 4.79
2749 3906 2.299297 CTCCTTGTAGGAAAGTGTCGGT 59.701 50.000 0.00 0.00 45.28 4.69
2750 3907 2.036733 TCCTTGTAGGAAAGTGTCGGTG 59.963 50.000 0.00 0.00 42.51 4.94
2751 3908 2.224209 CCTTGTAGGAAAGTGTCGGTGT 60.224 50.000 0.00 0.00 37.67 4.16
2752 3909 3.006110 CCTTGTAGGAAAGTGTCGGTGTA 59.994 47.826 0.00 0.00 37.67 2.90
2753 3910 3.648339 TGTAGGAAAGTGTCGGTGTAC 57.352 47.619 0.00 0.00 0.00 2.90
2754 3911 2.957680 TGTAGGAAAGTGTCGGTGTACA 59.042 45.455 0.00 0.00 0.00 2.90
2755 3912 3.384146 TGTAGGAAAGTGTCGGTGTACAA 59.616 43.478 0.00 0.00 0.00 2.41
2756 3913 3.547054 AGGAAAGTGTCGGTGTACAAA 57.453 42.857 0.00 0.00 0.00 2.83
2757 3914 3.876341 AGGAAAGTGTCGGTGTACAAAA 58.124 40.909 0.00 0.00 0.00 2.44
2758 3915 3.875134 AGGAAAGTGTCGGTGTACAAAAG 59.125 43.478 0.00 0.00 0.00 2.27
2759 3916 3.624410 GGAAAGTGTCGGTGTACAAAAGT 59.376 43.478 0.00 0.00 0.00 2.66
2760 3917 4.810491 GGAAAGTGTCGGTGTACAAAAGTA 59.190 41.667 0.00 0.00 0.00 2.24
2761 3918 5.050567 GGAAAGTGTCGGTGTACAAAAGTAG 60.051 44.000 0.00 0.00 0.00 2.57
2762 3919 3.986277 AGTGTCGGTGTACAAAAGTAGG 58.014 45.455 0.00 0.00 0.00 3.18
2763 3920 3.062042 GTGTCGGTGTACAAAAGTAGGG 58.938 50.000 0.00 0.00 0.00 3.53
2764 3921 2.037511 TGTCGGTGTACAAAAGTAGGGG 59.962 50.000 0.00 0.00 0.00 4.79
2765 3922 2.037641 GTCGGTGTACAAAAGTAGGGGT 59.962 50.000 0.00 0.00 0.00 4.95
2766 3923 2.299867 TCGGTGTACAAAAGTAGGGGTC 59.700 50.000 0.00 0.00 0.00 4.46
2767 3924 2.613725 CGGTGTACAAAAGTAGGGGTCC 60.614 54.545 0.00 0.00 0.00 4.46
2768 3925 2.290514 GGTGTACAAAAGTAGGGGTCCC 60.291 54.545 0.00 0.00 0.00 4.46
2770 3927 3.073503 GTGTACAAAAGTAGGGGTCCCTT 59.926 47.826 14.51 6.16 45.70 3.95
2771 3928 3.723154 TGTACAAAAGTAGGGGTCCCTTT 59.277 43.478 14.51 0.26 45.70 3.11
2772 3929 3.985553 ACAAAAGTAGGGGTCCCTTTT 57.014 42.857 14.51 6.87 45.70 2.27
2774 3931 3.572642 CAAAAGTAGGGGTCCCTTTTGT 58.427 45.455 14.51 2.22 45.70 2.83
2775 3932 4.732065 CAAAAGTAGGGGTCCCTTTTGTA 58.268 43.478 14.51 0.00 45.70 2.41
2776 3933 4.377762 AAAGTAGGGGTCCCTTTTGTAC 57.622 45.455 14.51 5.86 45.70 2.90
2777 3934 2.272698 AGTAGGGGTCCCTTTTGTACC 58.727 52.381 14.51 0.00 45.70 3.34
2780 3937 2.483057 GGGTCCCTTTTGTACCCCT 58.517 57.895 0.00 0.00 46.12 4.79
2781 3938 0.781920 GGGTCCCTTTTGTACCCCTT 59.218 55.000 0.00 0.00 46.12 3.95
2782 3939 1.148446 GGGTCCCTTTTGTACCCCTTT 59.852 52.381 0.00 0.00 46.12 3.11
2783 3940 2.379567 GGGTCCCTTTTGTACCCCTTTA 59.620 50.000 0.00 0.00 46.12 1.85
2784 3941 3.424703 GGTCCCTTTTGTACCCCTTTAC 58.575 50.000 0.00 0.00 0.00 2.01
2785 3942 3.074985 GGTCCCTTTTGTACCCCTTTACT 59.925 47.826 0.00 0.00 0.00 2.24
2786 3943 4.448200 GGTCCCTTTTGTACCCCTTTACTT 60.448 45.833 0.00 0.00 0.00 2.24
2787 3944 4.521639 GTCCCTTTTGTACCCCTTTACTTG 59.478 45.833 0.00 0.00 0.00 3.16
2788 3945 4.168479 TCCCTTTTGTACCCCTTTACTTGT 59.832 41.667 0.00 0.00 0.00 3.16
2789 3946 4.279922 CCCTTTTGTACCCCTTTACTTGTG 59.720 45.833 0.00 0.00 0.00 3.33
2790 3947 4.261867 CCTTTTGTACCCCTTTACTTGTGC 60.262 45.833 0.00 0.00 0.00 4.57
2791 3948 2.172851 TGTACCCCTTTACTTGTGCG 57.827 50.000 0.00 0.00 0.00 5.34
2792 3949 0.800631 GTACCCCTTTACTTGTGCGC 59.199 55.000 0.00 0.00 0.00 6.09
2793 3950 0.671163 TACCCCTTTACTTGTGCGCG 60.671 55.000 0.00 0.00 0.00 6.86
2794 3951 2.686816 CCCCTTTACTTGTGCGCGG 61.687 63.158 8.83 0.00 0.00 6.46
2795 3952 2.686816 CCCTTTACTTGTGCGCGGG 61.687 63.158 8.83 0.00 0.00 6.13
2796 3953 2.175811 CTTTACTTGTGCGCGGGC 59.824 61.111 18.81 18.81 40.52 6.13
2797 3954 2.281208 TTTACTTGTGCGCGGGCT 60.281 55.556 25.62 7.22 40.82 5.19
2798 3955 2.513065 CTTTACTTGTGCGCGGGCTG 62.513 60.000 25.62 14.46 40.82 4.85
2799 3956 3.818121 TTACTTGTGCGCGGGCTGT 62.818 57.895 25.62 18.87 40.82 4.40
2837 3994 2.031012 CACGCTTGGCAGAGTGGA 59.969 61.111 11.06 0.00 44.73 4.02
2838 3995 2.031516 CACGCTTGGCAGAGTGGAG 61.032 63.158 11.06 0.00 44.73 3.86
2839 3996 2.435586 CGCTTGGCAGAGTGGAGG 60.436 66.667 0.00 0.00 0.00 4.30
2840 3997 2.947532 CGCTTGGCAGAGTGGAGGA 61.948 63.158 0.00 0.00 0.00 3.71
2841 3998 1.376466 GCTTGGCAGAGTGGAGGAA 59.624 57.895 0.00 0.00 0.00 3.36
2842 3999 0.676151 GCTTGGCAGAGTGGAGGAAG 60.676 60.000 0.00 0.00 0.00 3.46
2843 4000 0.676151 CTTGGCAGAGTGGAGGAAGC 60.676 60.000 0.00 0.00 0.00 3.86
2844 4001 1.418097 TTGGCAGAGTGGAGGAAGCA 61.418 55.000 0.00 0.00 0.00 3.91
2845 4002 1.376466 GGCAGAGTGGAGGAAGCAA 59.624 57.895 0.00 0.00 0.00 3.91
2846 4003 0.250901 GGCAGAGTGGAGGAAGCAAA 60.251 55.000 0.00 0.00 0.00 3.68
2847 4004 1.163554 GCAGAGTGGAGGAAGCAAAG 58.836 55.000 0.00 0.00 0.00 2.77
2848 4005 1.271054 GCAGAGTGGAGGAAGCAAAGA 60.271 52.381 0.00 0.00 0.00 2.52
2849 4006 2.421619 CAGAGTGGAGGAAGCAAAGAC 58.578 52.381 0.00 0.00 0.00 3.01
2850 4007 2.050144 AGAGTGGAGGAAGCAAAGACA 58.950 47.619 0.00 0.00 0.00 3.41
2851 4008 2.147150 GAGTGGAGGAAGCAAAGACAC 58.853 52.381 0.00 0.00 0.00 3.67
2852 4009 1.490490 AGTGGAGGAAGCAAAGACACA 59.510 47.619 0.00 0.00 0.00 3.72
2853 4010 2.092429 AGTGGAGGAAGCAAAGACACAA 60.092 45.455 0.00 0.00 0.00 3.33
2854 4011 2.291741 GTGGAGGAAGCAAAGACACAAG 59.708 50.000 0.00 0.00 0.00 3.16
2855 4012 2.172505 TGGAGGAAGCAAAGACACAAGA 59.827 45.455 0.00 0.00 0.00 3.02
2856 4013 2.550180 GGAGGAAGCAAAGACACAAGAC 59.450 50.000 0.00 0.00 0.00 3.01
2857 4014 3.471680 GAGGAAGCAAAGACACAAGACT 58.528 45.455 0.00 0.00 0.00 3.24
2858 4015 4.503296 GGAGGAAGCAAAGACACAAGACTA 60.503 45.833 0.00 0.00 0.00 2.59
2859 4016 5.234466 AGGAAGCAAAGACACAAGACTAT 57.766 39.130 0.00 0.00 0.00 2.12
2860 4017 5.625150 AGGAAGCAAAGACACAAGACTATT 58.375 37.500 0.00 0.00 0.00 1.73
2861 4018 6.769512 AGGAAGCAAAGACACAAGACTATTA 58.230 36.000 0.00 0.00 0.00 0.98
2862 4019 6.876257 AGGAAGCAAAGACACAAGACTATTAG 59.124 38.462 0.00 0.00 0.00 1.73
2863 4020 6.874134 GGAAGCAAAGACACAAGACTATTAGA 59.126 38.462 0.00 0.00 0.00 2.10
2864 4021 7.064016 GGAAGCAAAGACACAAGACTATTAGAG 59.936 40.741 0.00 0.00 0.00 2.43
2865 4022 5.872070 AGCAAAGACACAAGACTATTAGAGC 59.128 40.000 0.00 0.00 0.00 4.09
2866 4023 5.639506 GCAAAGACACAAGACTATTAGAGCA 59.360 40.000 0.00 0.00 0.00 4.26
2867 4024 6.183360 GCAAAGACACAAGACTATTAGAGCAG 60.183 42.308 0.00 0.00 0.00 4.24
2868 4025 5.004922 AGACACAAGACTATTAGAGCAGC 57.995 43.478 0.00 0.00 0.00 5.25
2869 4026 3.775202 ACACAAGACTATTAGAGCAGCG 58.225 45.455 0.00 0.00 0.00 5.18
2870 4027 2.537625 CACAAGACTATTAGAGCAGCGC 59.462 50.000 0.00 0.00 0.00 5.92
2871 4028 2.131183 CAAGACTATTAGAGCAGCGCC 58.869 52.381 2.29 0.00 0.00 6.53
2872 4029 1.403814 AGACTATTAGAGCAGCGCCA 58.596 50.000 2.29 0.00 0.00 5.69
2873 4030 1.757118 AGACTATTAGAGCAGCGCCAA 59.243 47.619 2.29 0.00 0.00 4.52
2874 4031 2.131183 GACTATTAGAGCAGCGCCAAG 58.869 52.381 2.29 0.00 0.00 3.61
2888 4045 3.025924 CCAAGCTGAAGGCACAAGA 57.974 52.632 0.00 0.00 44.79 3.02
2889 4046 1.321474 CCAAGCTGAAGGCACAAGAA 58.679 50.000 0.00 0.00 44.79 2.52
2890 4047 1.268899 CCAAGCTGAAGGCACAAGAAG 59.731 52.381 0.00 0.00 44.79 2.85
2891 4048 0.957362 AAGCTGAAGGCACAAGAAGC 59.043 50.000 0.00 0.00 44.79 3.86
2892 4049 0.179009 AGCTGAAGGCACAAGAAGCA 60.179 50.000 0.00 0.00 44.79 3.91
2893 4050 0.240411 GCTGAAGGCACAAGAAGCAG 59.760 55.000 0.00 0.00 41.35 4.24
2894 4051 1.888215 CTGAAGGCACAAGAAGCAGA 58.112 50.000 0.00 0.00 0.00 4.26
2895 4052 1.805345 CTGAAGGCACAAGAAGCAGAG 59.195 52.381 0.00 0.00 0.00 3.35
2896 4053 1.163554 GAAGGCACAAGAAGCAGAGG 58.836 55.000 0.00 0.00 0.00 3.69
2897 4054 0.251077 AAGGCACAAGAAGCAGAGGG 60.251 55.000 0.00 0.00 0.00 4.30
2898 4055 1.676967 GGCACAAGAAGCAGAGGGG 60.677 63.158 0.00 0.00 0.00 4.79
2899 4056 1.073897 GCACAAGAAGCAGAGGGGT 59.926 57.895 0.00 0.00 0.00 4.95
2900 4057 1.239968 GCACAAGAAGCAGAGGGGTG 61.240 60.000 0.00 0.00 0.00 4.61
2901 4058 0.397941 CACAAGAAGCAGAGGGGTGA 59.602 55.000 0.00 0.00 0.00 4.02
2902 4059 0.689623 ACAAGAAGCAGAGGGGTGAG 59.310 55.000 0.00 0.00 0.00 3.51
2903 4060 0.035630 CAAGAAGCAGAGGGGTGAGG 60.036 60.000 0.00 0.00 0.00 3.86
2904 4061 0.474660 AAGAAGCAGAGGGGTGAGGT 60.475 55.000 0.00 0.00 0.00 3.85
2905 4062 1.197430 AGAAGCAGAGGGGTGAGGTG 61.197 60.000 0.00 0.00 0.00 4.00
2906 4063 1.152030 AAGCAGAGGGGTGAGGTGA 60.152 57.895 0.00 0.00 0.00 4.02
2907 4064 0.768221 AAGCAGAGGGGTGAGGTGAA 60.768 55.000 0.00 0.00 0.00 3.18
2908 4065 0.768221 AGCAGAGGGGTGAGGTGAAA 60.768 55.000 0.00 0.00 0.00 2.69
2909 4066 0.606673 GCAGAGGGGTGAGGTGAAAC 60.607 60.000 0.00 0.00 0.00 2.78
2910 4067 1.059913 CAGAGGGGTGAGGTGAAACT 58.940 55.000 0.00 0.00 36.74 2.66
2911 4068 1.002544 CAGAGGGGTGAGGTGAAACTC 59.997 57.143 0.00 0.00 36.74 3.01
2912 4069 0.325272 GAGGGGTGAGGTGAAACTCC 59.675 60.000 0.00 0.00 37.18 3.85
2913 4070 1.134438 AGGGGTGAGGTGAAACTCCC 61.134 60.000 0.00 0.00 37.70 4.30
2914 4071 1.379146 GGGTGAGGTGAAACTCCCC 59.621 63.158 6.26 6.26 39.30 4.81
2915 4072 1.379146 GGTGAGGTGAAACTCCCCC 59.621 63.158 0.00 0.00 36.66 5.40
2916 4073 1.003718 GTGAGGTGAAACTCCCCCG 60.004 63.158 0.00 0.00 36.66 5.73
2917 4074 2.221299 TGAGGTGAAACTCCCCCGG 61.221 63.158 0.00 0.00 36.66 5.73
2918 4075 3.623703 GAGGTGAAACTCCCCCGGC 62.624 68.421 0.00 0.00 36.74 6.13
2919 4076 3.961414 GGTGAAACTCCCCCGGCA 61.961 66.667 0.00 0.00 36.74 5.69
2920 4077 2.114411 GTGAAACTCCCCCGGCAA 59.886 61.111 0.00 0.00 0.00 4.52
2921 4078 1.971695 GTGAAACTCCCCCGGCAAG 60.972 63.158 0.00 0.00 0.00 4.01
2922 4079 2.150719 TGAAACTCCCCCGGCAAGA 61.151 57.895 0.00 0.00 0.00 3.02
2923 4080 1.377333 GAAACTCCCCCGGCAAGAG 60.377 63.158 10.96 10.96 0.00 2.85
2924 4081 2.125766 GAAACTCCCCCGGCAAGAGT 62.126 60.000 12.08 12.08 42.58 3.24
2925 4082 2.125766 AAACTCCCCCGGCAAGAGTC 62.126 60.000 16.64 0.00 39.92 3.36
2926 4083 2.685380 CTCCCCCGGCAAGAGTCT 60.685 66.667 0.00 0.00 0.00 3.24
2927 4084 2.203938 TCCCCCGGCAAGAGTCTT 60.204 61.111 0.00 0.00 0.00 3.01
2928 4085 2.045926 CCCCCGGCAAGAGTCTTG 60.046 66.667 25.68 25.68 0.00 3.02
2929 4086 2.747855 CCCCGGCAAGAGTCTTGC 60.748 66.667 38.61 38.61 44.22 4.01
2934 4091 2.747855 GCAAGAGTCTTGCCGGGG 60.748 66.667 37.26 12.99 39.38 5.73
2935 4092 3.068881 CAAGAGTCTTGCCGGGGA 58.931 61.111 19.55 0.00 0.00 4.81
2936 4093 1.374947 CAAGAGTCTTGCCGGGGAA 59.625 57.895 19.55 0.00 0.00 3.97
2937 4094 0.250727 CAAGAGTCTTGCCGGGGAAA 60.251 55.000 19.55 0.00 0.00 3.13
2938 4095 0.250770 AAGAGTCTTGCCGGGGAAAC 60.251 55.000 4.10 4.22 0.00 2.78
2939 4096 1.128188 AGAGTCTTGCCGGGGAAACT 61.128 55.000 2.18 13.08 0.00 2.66
2940 4097 0.250770 GAGTCTTGCCGGGGAAACTT 60.251 55.000 2.18 0.00 0.00 2.66
2941 4098 0.537371 AGTCTTGCCGGGGAAACTTG 60.537 55.000 2.18 0.00 0.00 3.16
2942 4099 1.901464 TCTTGCCGGGGAAACTTGC 60.901 57.895 2.18 0.00 0.00 4.01
2943 4100 2.915137 TTGCCGGGGAAACTTGCC 60.915 61.111 2.18 0.00 38.05 4.52
2949 4106 3.455152 GGGAAACTTGCCCCACAC 58.545 61.111 0.00 0.00 42.24 3.82
2950 4107 2.207229 GGGAAACTTGCCCCACACC 61.207 63.158 0.00 0.00 42.24 4.16
2951 4108 1.456705 GGAAACTTGCCCCACACCA 60.457 57.895 0.00 0.00 0.00 4.17
2952 4109 1.045911 GGAAACTTGCCCCACACCAA 61.046 55.000 0.00 0.00 0.00 3.67
2953 4110 0.104120 GAAACTTGCCCCACACCAAC 59.896 55.000 0.00 0.00 0.00 3.77
2954 4111 0.616111 AAACTTGCCCCACACCAACA 60.616 50.000 0.00 0.00 0.00 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.642377 GAGTCCTAGATTAGGGGGTGTTC 59.358 52.174 2.49 0.00 46.24 3.18
3 4 2.610873 GGAGTCCTAGATTAGGGGGTG 58.389 57.143 0.41 0.00 46.24 4.61
5 6 1.796415 AGGGAGTCCTAGATTAGGGGG 59.204 57.143 9.58 0.00 46.24 5.40
6 7 2.451273 TGAGGGAGTCCTAGATTAGGGG 59.549 54.545 9.58 0.00 45.05 4.79
7 8 3.905493 TGAGGGAGTCCTAGATTAGGG 57.095 52.381 9.58 0.00 45.05 3.53
8 9 6.782988 TGTATTTGAGGGAGTCCTAGATTAGG 59.217 42.308 9.58 0.00 45.05 2.69
9 10 7.507616 AGTGTATTTGAGGGAGTCCTAGATTAG 59.492 40.741 9.58 0.00 45.05 1.73
10 11 7.363031 AGTGTATTTGAGGGAGTCCTAGATTA 58.637 38.462 9.58 0.00 45.05 1.75
11 12 6.206042 AGTGTATTTGAGGGAGTCCTAGATT 58.794 40.000 9.58 0.00 45.05 2.40
12 13 5.782925 AGTGTATTTGAGGGAGTCCTAGAT 58.217 41.667 9.58 0.08 45.05 1.98
13 14 5.208294 AGTGTATTTGAGGGAGTCCTAGA 57.792 43.478 9.58 0.00 45.05 2.43
14 15 6.778069 TGATAGTGTATTTGAGGGAGTCCTAG 59.222 42.308 9.58 0.00 45.05 3.02
15 16 6.679542 TGATAGTGTATTTGAGGGAGTCCTA 58.320 40.000 9.58 0.00 45.05 2.94
17 18 5.871396 TGATAGTGTATTTGAGGGAGTCC 57.129 43.478 0.00 0.00 0.00 3.85
18 19 7.151308 CAGATGATAGTGTATTTGAGGGAGTC 58.849 42.308 0.00 0.00 0.00 3.36
19 20 6.613271 ACAGATGATAGTGTATTTGAGGGAGT 59.387 38.462 0.00 0.00 0.00 3.85
20 21 7.060383 ACAGATGATAGTGTATTTGAGGGAG 57.940 40.000 0.00 0.00 0.00 4.30
21 22 7.275183 CAACAGATGATAGTGTATTTGAGGGA 58.725 38.462 0.00 0.00 0.00 4.20
22 23 6.017605 GCAACAGATGATAGTGTATTTGAGGG 60.018 42.308 0.00 0.00 0.00 4.30
23 24 6.539826 TGCAACAGATGATAGTGTATTTGAGG 59.460 38.462 0.00 0.00 0.00 3.86
24 25 7.543947 TGCAACAGATGATAGTGTATTTGAG 57.456 36.000 0.00 0.00 0.00 3.02
25 26 7.920160 TTGCAACAGATGATAGTGTATTTGA 57.080 32.000 0.00 0.00 0.00 2.69
26 27 7.166970 GCATTGCAACAGATGATAGTGTATTTG 59.833 37.037 0.00 0.00 0.00 2.32
27 28 7.148035 TGCATTGCAACAGATGATAGTGTATTT 60.148 33.333 9.33 0.00 34.76 1.40
28 29 6.319405 TGCATTGCAACAGATGATAGTGTATT 59.681 34.615 9.33 0.00 34.76 1.89
29 30 5.824097 TGCATTGCAACAGATGATAGTGTAT 59.176 36.000 9.33 0.00 34.76 2.29
30 31 5.065090 GTGCATTGCAACAGATGATAGTGTA 59.935 40.000 13.94 0.00 41.47 2.90
31 32 4.011698 TGCATTGCAACAGATGATAGTGT 58.988 39.130 9.33 0.00 34.76 3.55
32 33 4.348656 GTGCATTGCAACAGATGATAGTG 58.651 43.478 13.94 0.00 41.47 2.74
33 34 3.064408 CGTGCATTGCAACAGATGATAGT 59.936 43.478 13.94 0.00 41.47 2.12
34 35 3.547413 CCGTGCATTGCAACAGATGATAG 60.547 47.826 13.94 0.00 41.47 2.08
35 36 2.355444 CCGTGCATTGCAACAGATGATA 59.645 45.455 13.94 0.00 41.47 2.15
36 37 1.133598 CCGTGCATTGCAACAGATGAT 59.866 47.619 13.94 0.00 41.47 2.45
37 38 0.522626 CCGTGCATTGCAACAGATGA 59.477 50.000 13.94 0.00 41.47 2.92
38 39 0.457166 CCCGTGCATTGCAACAGATG 60.457 55.000 13.94 0.00 41.47 2.90
39 40 1.885157 CCCGTGCATTGCAACAGAT 59.115 52.632 13.94 0.00 41.47 2.90
40 41 2.918345 GCCCGTGCATTGCAACAGA 61.918 57.895 13.94 0.00 41.47 3.41
41 42 2.431260 GCCCGTGCATTGCAACAG 60.431 61.111 13.94 7.89 41.47 3.16
42 43 3.222121 TGCCCGTGCATTGCAACA 61.222 55.556 13.94 6.85 44.23 3.33
50 51 0.602638 CACTAGAAAGTGCCCGTGCA 60.603 55.000 0.00 0.00 46.28 4.57
51 52 2.162716 CACTAGAAAGTGCCCGTGC 58.837 57.895 0.00 0.00 46.28 5.34
57 58 9.008683 GGATGATTGTCCTTCACTAGAAAGTGC 62.009 44.444 0.00 0.00 42.53 4.40
58 59 6.314896 GGATGATTGTCCTTCACTAGAAAGTG 59.685 42.308 0.00 0.00 43.27 3.16
59 60 6.410540 GGATGATTGTCCTTCACTAGAAAGT 58.589 40.000 0.00 0.00 35.32 2.66
60 61 5.521735 CGGATGATTGTCCTTCACTAGAAAG 59.478 44.000 0.00 0.00 36.07 2.62
61 62 5.419542 CGGATGATTGTCCTTCACTAGAAA 58.580 41.667 0.00 0.00 36.07 2.52
62 63 4.141937 CCGGATGATTGTCCTTCACTAGAA 60.142 45.833 0.00 0.00 36.07 2.10
63 64 3.384789 CCGGATGATTGTCCTTCACTAGA 59.615 47.826 0.00 0.00 36.07 2.43
64 65 3.133003 ACCGGATGATTGTCCTTCACTAG 59.867 47.826 9.46 0.00 36.07 2.57
65 66 3.104512 ACCGGATGATTGTCCTTCACTA 58.895 45.455 9.46 0.00 36.07 2.74
66 67 1.909302 ACCGGATGATTGTCCTTCACT 59.091 47.619 9.46 0.00 36.07 3.41
67 68 2.009774 CACCGGATGATTGTCCTTCAC 58.990 52.381 9.46 0.00 36.07 3.18
68 69 1.905894 TCACCGGATGATTGTCCTTCA 59.094 47.619 9.46 0.00 36.07 3.02
69 70 2.691409 TCACCGGATGATTGTCCTTC 57.309 50.000 9.46 0.00 36.07 3.46
78 79 1.852633 ACACTCAGATCACCGGATGA 58.147 50.000 9.46 9.04 43.13 2.92
79 80 3.801114 TTACACTCAGATCACCGGATG 57.199 47.619 9.46 2.48 32.67 3.51
80 81 4.443457 CCATTTACACTCAGATCACCGGAT 60.443 45.833 9.46 0.00 36.13 4.18
81 82 3.118775 CCATTTACACTCAGATCACCGGA 60.119 47.826 9.46 0.00 0.00 5.14
82 83 3.198068 CCATTTACACTCAGATCACCGG 58.802 50.000 0.00 0.00 0.00 5.28
83 84 3.618594 CACCATTTACACTCAGATCACCG 59.381 47.826 0.00 0.00 0.00 4.94
84 85 3.375299 GCACCATTTACACTCAGATCACC 59.625 47.826 0.00 0.00 0.00 4.02
85 86 4.256920 AGCACCATTTACACTCAGATCAC 58.743 43.478 0.00 0.00 0.00 3.06
86 87 4.558226 AGCACCATTTACACTCAGATCA 57.442 40.909 0.00 0.00 0.00 2.92
87 88 4.697352 ACAAGCACCATTTACACTCAGATC 59.303 41.667 0.00 0.00 0.00 2.75
88 89 4.456911 CACAAGCACCATTTACACTCAGAT 59.543 41.667 0.00 0.00 0.00 2.90
89 90 3.814842 CACAAGCACCATTTACACTCAGA 59.185 43.478 0.00 0.00 0.00 3.27
90 91 3.814842 TCACAAGCACCATTTACACTCAG 59.185 43.478 0.00 0.00 0.00 3.35
91 92 3.814625 TCACAAGCACCATTTACACTCA 58.185 40.909 0.00 0.00 0.00 3.41
92 93 3.815401 ACTCACAAGCACCATTTACACTC 59.185 43.478 0.00 0.00 0.00 3.51
93 94 3.820557 ACTCACAAGCACCATTTACACT 58.179 40.909 0.00 0.00 0.00 3.55
94 95 5.682943 TTACTCACAAGCACCATTTACAC 57.317 39.130 0.00 0.00 0.00 2.90
95 96 5.182950 CCATTACTCACAAGCACCATTTACA 59.817 40.000 0.00 0.00 0.00 2.41
96 97 5.393027 CCCATTACTCACAAGCACCATTTAC 60.393 44.000 0.00 0.00 0.00 2.01
97 98 4.704540 CCCATTACTCACAAGCACCATTTA 59.295 41.667 0.00 0.00 0.00 1.40
98 99 3.511146 CCCATTACTCACAAGCACCATTT 59.489 43.478 0.00 0.00 0.00 2.32
99 100 3.091545 CCCATTACTCACAAGCACCATT 58.908 45.455 0.00 0.00 0.00 3.16
100 101 2.726821 CCCATTACTCACAAGCACCAT 58.273 47.619 0.00 0.00 0.00 3.55
101 102 1.886222 GCCCATTACTCACAAGCACCA 60.886 52.381 0.00 0.00 0.00 4.17
102 103 0.811281 GCCCATTACTCACAAGCACC 59.189 55.000 0.00 0.00 0.00 5.01
103 104 0.811281 GGCCCATTACTCACAAGCAC 59.189 55.000 0.00 0.00 0.00 4.40
104 105 0.676466 CGGCCCATTACTCACAAGCA 60.676 55.000 0.00 0.00 0.00 3.91
105 106 1.993369 GCGGCCCATTACTCACAAGC 61.993 60.000 0.00 0.00 0.00 4.01
106 107 0.676466 TGCGGCCCATTACTCACAAG 60.676 55.000 0.00 0.00 0.00 3.16
107 108 0.250945 TTGCGGCCCATTACTCACAA 60.251 50.000 0.00 0.00 0.00 3.33
108 109 0.958382 GTTGCGGCCCATTACTCACA 60.958 55.000 0.00 0.00 0.00 3.58
109 110 1.800681 GTTGCGGCCCATTACTCAC 59.199 57.895 0.00 0.00 0.00 3.51
110 111 1.743623 CGTTGCGGCCCATTACTCA 60.744 57.895 0.00 0.00 0.00 3.41
111 112 3.098555 CGTTGCGGCCCATTACTC 58.901 61.111 0.00 0.00 0.00 2.59
112 113 3.131478 GCGTTGCGGCCCATTACT 61.131 61.111 0.00 0.00 0.00 2.24
122 123 4.025401 GTTGGACAGGGCGTTGCG 62.025 66.667 0.00 0.00 0.00 4.85
123 124 3.670377 GGTTGGACAGGGCGTTGC 61.670 66.667 0.00 0.00 0.00 4.17
124 125 3.353836 CGGTTGGACAGGGCGTTG 61.354 66.667 0.00 0.00 0.00 4.10
129 130 3.322466 AGGAGCGGTTGGACAGGG 61.322 66.667 0.00 0.00 0.00 4.45
130 131 2.046892 CAGGAGCGGTTGGACAGG 60.047 66.667 0.00 0.00 0.00 4.00
131 132 1.079543 CTCAGGAGCGGTTGGACAG 60.080 63.158 0.00 0.00 0.00 3.51
132 133 3.059982 CTCAGGAGCGGTTGGACA 58.940 61.111 0.00 0.00 0.00 4.02
133 134 2.435059 GCTCAGGAGCGGTTGGAC 60.435 66.667 5.41 0.00 45.29 4.02
142 143 3.432517 CTCCACTTTCGCTCAGGAG 57.567 57.895 0.00 0.00 39.83 3.69
143 144 0.318441 CACTCCACTTTCGCTCAGGA 59.682 55.000 0.00 0.00 0.00 3.86
144 145 0.318441 TCACTCCACTTTCGCTCAGG 59.682 55.000 0.00 0.00 0.00 3.86
145 146 2.154854 TTCACTCCACTTTCGCTCAG 57.845 50.000 0.00 0.00 0.00 3.35
146 147 2.483876 CTTTCACTCCACTTTCGCTCA 58.516 47.619 0.00 0.00 0.00 4.26
147 148 1.195674 GCTTTCACTCCACTTTCGCTC 59.804 52.381 0.00 0.00 0.00 5.03
148 149 1.202698 AGCTTTCACTCCACTTTCGCT 60.203 47.619 0.00 0.00 0.00 4.93
149 150 1.230324 AGCTTTCACTCCACTTTCGC 58.770 50.000 0.00 0.00 0.00 4.70
150 151 2.603173 GCAAGCTTTCACTCCACTTTCG 60.603 50.000 0.00 0.00 0.00 3.46
151 152 2.620585 AGCAAGCTTTCACTCCACTTTC 59.379 45.455 0.00 0.00 0.00 2.62
152 153 2.620585 GAGCAAGCTTTCACTCCACTTT 59.379 45.455 0.00 0.00 0.00 2.66
153 154 2.225467 GAGCAAGCTTTCACTCCACTT 58.775 47.619 0.00 0.00 0.00 3.16
154 155 1.544314 GGAGCAAGCTTTCACTCCACT 60.544 52.381 25.05 4.14 46.57 4.00
155 156 0.877743 GGAGCAAGCTTTCACTCCAC 59.122 55.000 25.05 7.75 46.57 4.02
156 157 3.329300 GGAGCAAGCTTTCACTCCA 57.671 52.632 25.05 0.00 46.57 3.86
158 159 2.498167 TCTTGGAGCAAGCTTTCACTC 58.502 47.619 0.00 4.21 40.84 3.51
159 160 2.645838 TCTTGGAGCAAGCTTTCACT 57.354 45.000 0.00 0.00 40.84 3.41
160 161 3.127721 GGTATCTTGGAGCAAGCTTTCAC 59.872 47.826 0.00 0.00 40.84 3.18
161 162 3.244875 TGGTATCTTGGAGCAAGCTTTCA 60.245 43.478 0.00 0.00 40.84 2.69
162 163 3.347216 TGGTATCTTGGAGCAAGCTTTC 58.653 45.455 0.00 0.00 40.84 2.62
163 164 3.439857 TGGTATCTTGGAGCAAGCTTT 57.560 42.857 0.00 0.00 40.84 3.51
164 165 3.549794 GATGGTATCTTGGAGCAAGCTT 58.450 45.455 0.00 0.00 40.84 3.74
165 166 2.484417 CGATGGTATCTTGGAGCAAGCT 60.484 50.000 0.00 0.00 40.84 3.74
166 167 1.869767 CGATGGTATCTTGGAGCAAGC 59.130 52.381 0.00 0.00 40.84 4.01
167 168 3.126831 GACGATGGTATCTTGGAGCAAG 58.873 50.000 0.00 0.00 42.25 4.01
168 169 2.499693 TGACGATGGTATCTTGGAGCAA 59.500 45.455 0.00 0.00 0.00 3.91
169 170 2.107366 TGACGATGGTATCTTGGAGCA 58.893 47.619 0.00 0.00 0.00 4.26
170 171 2.890808 TGACGATGGTATCTTGGAGC 57.109 50.000 0.00 0.00 0.00 4.70
171 172 5.237344 GGAAAATGACGATGGTATCTTGGAG 59.763 44.000 0.00 0.00 0.00 3.86
172 173 5.123227 GGAAAATGACGATGGTATCTTGGA 58.877 41.667 0.00 0.00 0.00 3.53
173 174 4.881273 TGGAAAATGACGATGGTATCTTGG 59.119 41.667 0.00 0.00 0.00 3.61
174 175 6.316140 TCTTGGAAAATGACGATGGTATCTTG 59.684 38.462 0.00 0.00 0.00 3.02
175 176 6.414732 TCTTGGAAAATGACGATGGTATCTT 58.585 36.000 0.00 0.00 0.00 2.40
176 177 5.989477 TCTTGGAAAATGACGATGGTATCT 58.011 37.500 0.00 0.00 0.00 1.98
177 178 6.049149 TCTCTTGGAAAATGACGATGGTATC 58.951 40.000 0.00 0.00 0.00 2.24
178 179 5.989477 TCTCTTGGAAAATGACGATGGTAT 58.011 37.500 0.00 0.00 0.00 2.73
179 180 5.414789 TCTCTTGGAAAATGACGATGGTA 57.585 39.130 0.00 0.00 0.00 3.25
180 181 4.286297 TCTCTTGGAAAATGACGATGGT 57.714 40.909 0.00 0.00 0.00 3.55
181 182 5.165911 CATCTCTTGGAAAATGACGATGG 57.834 43.478 0.00 0.00 0.00 3.51
193 194 7.723616 TGAATTACTTCAAAACCATCTCTTGGA 59.276 33.333 0.00 0.00 42.18 3.53
194 195 7.885297 TGAATTACTTCAAAACCATCTCTTGG 58.115 34.615 0.00 0.00 43.73 3.61
195 196 8.025445 CCTGAATTACTTCAAAACCATCTCTTG 58.975 37.037 0.00 0.00 40.78 3.02
196 197 7.725844 ACCTGAATTACTTCAAAACCATCTCTT 59.274 33.333 0.00 0.00 40.78 2.85
197 198 7.234355 ACCTGAATTACTTCAAAACCATCTCT 58.766 34.615 0.00 0.00 40.78 3.10
198 199 7.454260 ACCTGAATTACTTCAAAACCATCTC 57.546 36.000 0.00 0.00 40.78 2.75
199 200 7.661040 CAACCTGAATTACTTCAAAACCATCT 58.339 34.615 0.00 0.00 40.78 2.90
200 201 6.366061 GCAACCTGAATTACTTCAAAACCATC 59.634 38.462 0.00 0.00 40.78 3.51
201 202 6.183360 TGCAACCTGAATTACTTCAAAACCAT 60.183 34.615 0.00 0.00 40.78 3.55
202 203 5.127845 TGCAACCTGAATTACTTCAAAACCA 59.872 36.000 0.00 0.00 40.78 3.67
203 204 5.596845 TGCAACCTGAATTACTTCAAAACC 58.403 37.500 0.00 0.00 40.78 3.27
204 205 6.922957 TGATGCAACCTGAATTACTTCAAAAC 59.077 34.615 0.00 0.00 40.78 2.43
205 206 7.048629 TGATGCAACCTGAATTACTTCAAAA 57.951 32.000 0.00 0.00 40.78 2.44
206 207 6.265196 ACTGATGCAACCTGAATTACTTCAAA 59.735 34.615 0.00 0.00 40.78 2.69
207 208 5.769662 ACTGATGCAACCTGAATTACTTCAA 59.230 36.000 0.00 0.00 40.78 2.69
208 209 5.316167 ACTGATGCAACCTGAATTACTTCA 58.684 37.500 0.00 0.00 39.07 3.02
209 210 5.446473 CGACTGATGCAACCTGAATTACTTC 60.446 44.000 0.00 0.00 0.00 3.01
210 211 4.393062 CGACTGATGCAACCTGAATTACTT 59.607 41.667 0.00 0.00 0.00 2.24
211 212 3.935203 CGACTGATGCAACCTGAATTACT 59.065 43.478 0.00 0.00 0.00 2.24
212 213 3.485877 GCGACTGATGCAACCTGAATTAC 60.486 47.826 0.00 0.00 0.00 1.89
213 214 2.677836 GCGACTGATGCAACCTGAATTA 59.322 45.455 0.00 0.00 0.00 1.40
214 215 1.470098 GCGACTGATGCAACCTGAATT 59.530 47.619 0.00 0.00 0.00 2.17
215 216 1.089920 GCGACTGATGCAACCTGAAT 58.910 50.000 0.00 0.00 0.00 2.57
216 217 0.955428 GGCGACTGATGCAACCTGAA 60.955 55.000 0.00 0.00 0.00 3.02
217 218 1.375908 GGCGACTGATGCAACCTGA 60.376 57.895 0.00 0.00 0.00 3.86
218 219 1.236616 TTGGCGACTGATGCAACCTG 61.237 55.000 0.00 0.00 0.00 4.00
219 220 0.957395 CTTGGCGACTGATGCAACCT 60.957 55.000 0.00 0.00 0.00 3.50
220 221 0.955428 TCTTGGCGACTGATGCAACC 60.955 55.000 0.00 0.00 0.00 3.77
221 222 1.063174 GATCTTGGCGACTGATGCAAC 59.937 52.381 2.19 0.00 0.00 4.17
222 223 1.338960 TGATCTTGGCGACTGATGCAA 60.339 47.619 2.19 0.00 0.00 4.08
223 224 0.249955 TGATCTTGGCGACTGATGCA 59.750 50.000 2.19 0.00 0.00 3.96
224 225 1.530293 GATGATCTTGGCGACTGATGC 59.470 52.381 2.19 0.00 0.00 3.91
225 226 2.543012 GTGATGATCTTGGCGACTGATG 59.457 50.000 2.19 0.00 0.00 3.07
226 227 2.484417 GGTGATGATCTTGGCGACTGAT 60.484 50.000 0.00 0.00 0.00 2.90
227 228 1.134699 GGTGATGATCTTGGCGACTGA 60.135 52.381 0.00 0.00 0.00 3.41
228 229 1.293924 GGTGATGATCTTGGCGACTG 58.706 55.000 0.00 0.00 0.00 3.51
229 230 0.179000 GGGTGATGATCTTGGCGACT 59.821 55.000 0.00 0.00 0.00 4.18
230 231 0.179000 AGGGTGATGATCTTGGCGAC 59.821 55.000 0.00 0.00 0.00 5.19
231 232 0.911769 AAGGGTGATGATCTTGGCGA 59.088 50.000 0.00 0.00 0.00 5.54
232 233 1.019673 CAAGGGTGATGATCTTGGCG 58.980 55.000 0.00 0.00 35.53 5.69
248 249 0.601057 CCCGGCCCAACTTTTACAAG 59.399 55.000 0.00 0.00 35.92 3.16
299 300 3.118992 TCGTTGAGCAGATGCACTATCTT 60.119 43.478 7.68 0.00 43.68 2.40
327 328 5.753438 TGACTAATCGTATGGATTTGAGTGC 59.247 40.000 8.82 0.00 42.77 4.40
332 333 5.106555 GCCCATGACTAATCGTATGGATTTG 60.107 44.000 0.00 1.52 42.77 2.32
342 343 5.334414 GCTTTATTCTGCCCATGACTAATCG 60.334 44.000 0.00 0.00 0.00 3.34
431 435 1.571955 TGCTAATCTCCTGGTGAGCA 58.428 50.000 4.63 5.94 41.18 4.26
436 440 7.398024 GGTAATGATAATGCTAATCTCCTGGT 58.602 38.462 0.00 0.00 0.00 4.00
455 459 6.160664 ACAGTTTTACAATCGTCGGTAATG 57.839 37.500 0.00 0.00 30.29 1.90
464 468 8.656849 ACTCAAGCTATAACAGTTTTACAATCG 58.343 33.333 0.00 0.00 0.00 3.34
535 547 2.336667 CATGTTTCATTTTGGGCGGTC 58.663 47.619 0.00 0.00 0.00 4.79
543 555 7.715657 TCAGTCAACTAAGCATGTTTCATTTT 58.284 30.769 0.00 0.00 0.00 1.82
613 626 8.034804 TCATATACATGTGCATACACCTGATAC 58.965 37.037 9.11 0.00 46.86 2.24
616 629 6.041979 ACTCATATACATGTGCATACACCTGA 59.958 38.462 9.11 0.00 46.86 3.86
618 631 6.226052 CACTCATATACATGTGCATACACCT 58.774 40.000 9.11 0.00 46.86 4.00
619 632 6.471976 CACTCATATACATGTGCATACACC 57.528 41.667 9.11 0.00 46.86 4.16
628 641 5.814188 CAGACACAAGCACTCATATACATGT 59.186 40.000 2.69 2.69 33.57 3.21
629 642 5.814188 ACAGACACAAGCACTCATATACATG 59.186 40.000 0.00 0.00 0.00 3.21
630 643 5.982356 ACAGACACAAGCACTCATATACAT 58.018 37.500 0.00 0.00 0.00 2.29
632 645 6.473778 CAGTACAGACACAAGCACTCATATAC 59.526 42.308 0.00 0.00 0.00 1.47
634 647 5.185828 TCAGTACAGACACAAGCACTCATAT 59.814 40.000 0.00 0.00 0.00 1.78
635 648 4.522789 TCAGTACAGACACAAGCACTCATA 59.477 41.667 0.00 0.00 0.00 2.15
636 649 3.321968 TCAGTACAGACACAAGCACTCAT 59.678 43.478 0.00 0.00 0.00 2.90
637 650 2.693074 TCAGTACAGACACAAGCACTCA 59.307 45.455 0.00 0.00 0.00 3.41
638 651 3.371102 TCAGTACAGACACAAGCACTC 57.629 47.619 0.00 0.00 0.00 3.51
639 652 3.070159 ACATCAGTACAGACACAAGCACT 59.930 43.478 0.00 0.00 0.00 4.40
665 787 6.772716 ACTCCATACGAAGATTATGGCATTTT 59.227 34.615 4.78 0.00 44.04 1.82
920 2058 7.708051 TGATGTGTTTCCTTTTTACAATTCGA 58.292 30.769 0.00 0.00 0.00 3.71
943 2081 7.905265 TGCCATTTTATTCATTCCTTCTTTGA 58.095 30.769 0.00 0.00 0.00 2.69
949 2087 8.732531 CAATGTTTGCCATTTTATTCATTCCTT 58.267 29.630 0.00 0.00 41.93 3.36
1122 2269 4.927267 ACCCATCAGAAGTACCATCAAA 57.073 40.909 0.00 0.00 0.00 2.69
1135 2282 5.243730 ACAATAAAGTGGTTGAACCCATCAG 59.756 40.000 12.53 0.00 39.77 2.90
1142 2289 5.235616 TCACTCGACAATAAAGTGGTTGAAC 59.764 40.000 2.26 0.00 40.60 3.18
1352 2499 5.308825 AGGTATGGTTGAAACACTTCTCTG 58.691 41.667 0.00 0.00 32.33 3.35
1372 2521 7.793948 AACTAAACACCTCACTCTATTAGGT 57.206 36.000 0.00 0.00 44.54 3.08
1403 2552 5.885912 GGGTATGAGGAAAAAGATACTTGCA 59.114 40.000 0.00 0.00 0.00 4.08
1447 2596 4.578928 AGTTTGCACTACGAGGAAAAATGT 59.421 37.500 0.00 0.00 0.00 2.71
1448 2597 5.108385 AGTTTGCACTACGAGGAAAAATG 57.892 39.130 0.00 0.00 0.00 2.32
1506 2656 9.430399 ACTAGGTTTAAAGTACTATGAGGCATA 57.570 33.333 0.00 0.00 0.00 3.14
1651 2801 7.986085 ATACAAACACAAGAAGAACAGCTAT 57.014 32.000 0.00 0.00 0.00 2.97
1655 2805 7.587757 GTGCTAATACAAACACAAGAAGAACAG 59.412 37.037 0.00 0.00 33.23 3.16
1664 2814 6.488344 TCAATGGAGTGCTAATACAAACACAA 59.512 34.615 0.00 0.00 35.47 3.33
1779 2929 2.944129 AGCTTCCTTGCCTACAACAAA 58.056 42.857 0.00 0.00 0.00 2.83
1814 2964 2.527123 TAGGGTTCACGGTGCCCA 60.527 61.111 21.29 8.52 44.69 5.36
1874 3024 2.662866 CCACCTCCGTAACCATCTCTA 58.337 52.381 0.00 0.00 0.00 2.43
1915 3065 5.759763 TGCTACAATTATCTGATGCATTCGT 59.240 36.000 0.00 3.61 0.00 3.85
1959 3109 7.396055 TCCCAATTGAATCTTTATTTCCGAACT 59.604 33.333 7.12 0.00 0.00 3.01
1963 3113 5.979517 GCTCCCAATTGAATCTTTATTTCCG 59.020 40.000 7.12 0.00 0.00 4.30
2004 3154 9.034800 AGTTGGATTTAAATTATTCCAGCTTGA 57.965 29.630 15.36 0.00 44.38 3.02
2184 3336 6.978343 TTAGATGATAAACGTTCTGGTTGG 57.022 37.500 0.00 0.00 0.00 3.77
2199 3353 7.067129 TCGTGTGTAGTTCTAGCTTTAGATGAT 59.933 37.037 0.00 0.00 0.00 2.45
2209 3363 5.524646 AGACTATCTCGTGTGTAGTTCTAGC 59.475 44.000 6.71 0.00 0.00 3.42
2268 3423 9.911788 AGAATTATTCAAGTCCATACATCAAGT 57.088 29.630 7.74 0.00 28.83 3.16
2347 3502 8.079874 TTTGGTCCCAATAGCTAATAAGCCATT 61.080 37.037 0.00 0.00 40.17 3.16
2358 3513 6.266131 TGAATCTATTTGGTCCCAATAGCT 57.734 37.500 15.12 5.75 35.70 3.32
2408 3563 5.857471 ATATGTTTGATGGACCATTGGTG 57.143 39.130 14.44 0.00 35.25 4.17
2432 3587 3.074412 GCAGCTTGTTAGTTTCCAGCTA 58.926 45.455 0.00 0.00 0.00 3.32
2467 3623 6.791867 ACATTGTTGTGGTAGATAGCTAGA 57.208 37.500 0.00 0.00 33.85 2.43
2470 3626 5.106157 GCAAACATTGTTGTGGTAGATAGCT 60.106 40.000 2.13 0.00 35.83 3.32
2501 3657 4.099881 TCATCATCACACATCCTTCATCGA 59.900 41.667 0.00 0.00 0.00 3.59
2514 3670 0.673333 GGTGTGCCGTCATCATCACA 60.673 55.000 0.00 0.00 37.14 3.58
2522 3678 2.425592 CCAGAAGGTGTGCCGTCA 59.574 61.111 2.77 0.00 44.22 4.35
2529 3685 0.545309 TGGAGCTAGCCAGAAGGTGT 60.545 55.000 12.13 0.00 37.19 4.16
2598 3754 6.831353 TCAGGTATTTCAAAGAACACCAGAAA 59.169 34.615 10.58 0.00 33.33 2.52
2616 3772 5.734720 CAGTATTCACCAACTGTCAGGTAT 58.265 41.667 4.53 0.32 38.62 2.73
2718 3875 8.138712 CACTTTCCTACAAGGAGAGATATGTAC 58.861 40.741 17.73 0.00 46.50 2.90
2721 3878 7.118496 ACACTTTCCTACAAGGAGAGATATG 57.882 40.000 17.73 9.70 46.50 1.78
2722 3879 6.039941 CGACACTTTCCTACAAGGAGAGATAT 59.960 42.308 17.73 5.05 46.50 1.63
2731 3888 3.107642 ACACCGACACTTTCCTACAAG 57.892 47.619 0.00 0.00 0.00 3.16
2734 3891 3.648339 TGTACACCGACACTTTCCTAC 57.352 47.619 0.00 0.00 0.00 3.18
2735 3892 4.669206 TTTGTACACCGACACTTTCCTA 57.331 40.909 0.00 0.00 0.00 2.94
2736 3893 3.547054 TTTGTACACCGACACTTTCCT 57.453 42.857 0.00 0.00 0.00 3.36
2737 3894 3.624410 ACTTTTGTACACCGACACTTTCC 59.376 43.478 0.00 0.00 0.00 3.13
2738 3895 4.870221 ACTTTTGTACACCGACACTTTC 57.130 40.909 0.00 0.00 0.00 2.62
2739 3896 4.812626 CCTACTTTTGTACACCGACACTTT 59.187 41.667 0.00 0.00 0.00 2.66
2740 3897 4.374399 CCTACTTTTGTACACCGACACTT 58.626 43.478 0.00 0.00 0.00 3.16
2741 3898 3.243975 CCCTACTTTTGTACACCGACACT 60.244 47.826 0.00 0.00 0.00 3.55
2742 3899 3.062042 CCCTACTTTTGTACACCGACAC 58.938 50.000 0.00 0.00 0.00 3.67
2743 3900 2.037511 CCCCTACTTTTGTACACCGACA 59.962 50.000 0.00 0.00 0.00 4.35
2744 3901 2.037641 ACCCCTACTTTTGTACACCGAC 59.962 50.000 0.00 0.00 0.00 4.79
2745 3902 2.299867 GACCCCTACTTTTGTACACCGA 59.700 50.000 0.00 0.00 0.00 4.69
2746 3903 2.613725 GGACCCCTACTTTTGTACACCG 60.614 54.545 0.00 0.00 0.00 4.94
2747 3904 2.290514 GGGACCCCTACTTTTGTACACC 60.291 54.545 0.00 0.00 0.00 4.16
2748 3905 2.641321 AGGGACCCCTACTTTTGTACAC 59.359 50.000 7.00 0.00 46.14 2.90
2749 3906 2.994355 AGGGACCCCTACTTTTGTACA 58.006 47.619 7.00 0.00 46.14 2.90
2763 3920 2.688902 AAAGGGGTACAAAAGGGACC 57.311 50.000 0.00 0.00 0.00 4.46
2764 3921 4.377762 AGTAAAGGGGTACAAAAGGGAC 57.622 45.455 0.00 0.00 0.00 4.46
2765 3922 4.168479 ACAAGTAAAGGGGTACAAAAGGGA 59.832 41.667 0.00 0.00 0.00 4.20
2766 3923 4.279922 CACAAGTAAAGGGGTACAAAAGGG 59.720 45.833 0.00 0.00 0.00 3.95
2767 3924 4.261867 GCACAAGTAAAGGGGTACAAAAGG 60.262 45.833 0.00 0.00 0.00 3.11
2768 3925 4.555906 CGCACAAGTAAAGGGGTACAAAAG 60.556 45.833 0.00 0.00 0.00 2.27
2769 3926 3.315749 CGCACAAGTAAAGGGGTACAAAA 59.684 43.478 0.00 0.00 0.00 2.44
2770 3927 2.879646 CGCACAAGTAAAGGGGTACAAA 59.120 45.455 0.00 0.00 0.00 2.83
2771 3928 2.496111 CGCACAAGTAAAGGGGTACAA 58.504 47.619 0.00 0.00 0.00 2.41
2772 3929 1.878948 GCGCACAAGTAAAGGGGTACA 60.879 52.381 0.30 0.00 0.00 2.90
2773 3930 0.800631 GCGCACAAGTAAAGGGGTAC 59.199 55.000 0.30 0.00 0.00 3.34
2774 3931 0.671163 CGCGCACAAGTAAAGGGGTA 60.671 55.000 8.75 0.00 0.00 3.69
2775 3932 1.964373 CGCGCACAAGTAAAGGGGT 60.964 57.895 8.75 0.00 0.00 4.95
2776 3933 2.686816 CCGCGCACAAGTAAAGGGG 61.687 63.158 8.75 0.00 0.00 4.79
2777 3934 2.686816 CCCGCGCACAAGTAAAGGG 61.687 63.158 8.75 1.86 0.00 3.95
2778 3935 2.867472 CCCGCGCACAAGTAAAGG 59.133 61.111 8.75 0.00 0.00 3.11
2779 3936 2.175811 GCCCGCGCACAAGTAAAG 59.824 61.111 8.75 0.00 34.03 1.85
2780 3937 2.281208 AGCCCGCGCACAAGTAAA 60.281 55.556 8.75 0.00 37.52 2.01
2781 3938 3.047280 CAGCCCGCGCACAAGTAA 61.047 61.111 8.75 0.00 37.52 2.24
2782 3939 4.308458 ACAGCCCGCGCACAAGTA 62.308 61.111 8.75 0.00 37.52 2.24
2820 3977 2.031012 TCCACTCTGCCAAGCGTG 59.969 61.111 0.00 0.00 38.60 5.34
2821 3978 2.345244 CTCCACTCTGCCAAGCGT 59.655 61.111 0.00 0.00 0.00 5.07
2822 3979 2.435586 CCTCCACTCTGCCAAGCG 60.436 66.667 0.00 0.00 0.00 4.68
2823 3980 0.676151 CTTCCTCCACTCTGCCAAGC 60.676 60.000 0.00 0.00 0.00 4.01
2824 3981 0.676151 GCTTCCTCCACTCTGCCAAG 60.676 60.000 0.00 0.00 0.00 3.61
2825 3982 1.376466 GCTTCCTCCACTCTGCCAA 59.624 57.895 0.00 0.00 0.00 4.52
2826 3983 1.418097 TTGCTTCCTCCACTCTGCCA 61.418 55.000 0.00 0.00 0.00 4.92
2827 3984 0.250901 TTTGCTTCCTCCACTCTGCC 60.251 55.000 0.00 0.00 0.00 4.85
2828 3985 1.163554 CTTTGCTTCCTCCACTCTGC 58.836 55.000 0.00 0.00 0.00 4.26
2829 3986 2.224378 TGTCTTTGCTTCCTCCACTCTG 60.224 50.000 0.00 0.00 0.00 3.35
2830 3987 2.050144 TGTCTTTGCTTCCTCCACTCT 58.950 47.619 0.00 0.00 0.00 3.24
2831 3988 2.147150 GTGTCTTTGCTTCCTCCACTC 58.853 52.381 0.00 0.00 0.00 3.51
2832 3989 1.490490 TGTGTCTTTGCTTCCTCCACT 59.510 47.619 0.00 0.00 0.00 4.00
2833 3990 1.967319 TGTGTCTTTGCTTCCTCCAC 58.033 50.000 0.00 0.00 0.00 4.02
2834 3991 2.172505 TCTTGTGTCTTTGCTTCCTCCA 59.827 45.455 0.00 0.00 0.00 3.86
2835 3992 2.550180 GTCTTGTGTCTTTGCTTCCTCC 59.450 50.000 0.00 0.00 0.00 4.30
2836 3993 3.471680 AGTCTTGTGTCTTTGCTTCCTC 58.528 45.455 0.00 0.00 0.00 3.71
2837 3994 3.567478 AGTCTTGTGTCTTTGCTTCCT 57.433 42.857 0.00 0.00 0.00 3.36
2838 3995 5.948992 AATAGTCTTGTGTCTTTGCTTCC 57.051 39.130 0.00 0.00 0.00 3.46
2839 3996 7.412455 GCTCTAATAGTCTTGTGTCTTTGCTTC 60.412 40.741 0.00 0.00 0.00 3.86
2840 3997 6.370166 GCTCTAATAGTCTTGTGTCTTTGCTT 59.630 38.462 0.00 0.00 0.00 3.91
2841 3998 5.872070 GCTCTAATAGTCTTGTGTCTTTGCT 59.128 40.000 0.00 0.00 0.00 3.91
2842 3999 5.639506 TGCTCTAATAGTCTTGTGTCTTTGC 59.360 40.000 0.00 0.00 0.00 3.68
2843 4000 6.183360 GCTGCTCTAATAGTCTTGTGTCTTTG 60.183 42.308 0.00 0.00 0.00 2.77
2844 4001 5.872070 GCTGCTCTAATAGTCTTGTGTCTTT 59.128 40.000 0.00 0.00 0.00 2.52
2845 4002 5.415221 GCTGCTCTAATAGTCTTGTGTCTT 58.585 41.667 0.00 0.00 0.00 3.01
2846 4003 4.439426 CGCTGCTCTAATAGTCTTGTGTCT 60.439 45.833 0.00 0.00 0.00 3.41
2847 4004 3.794028 CGCTGCTCTAATAGTCTTGTGTC 59.206 47.826 0.00 0.00 0.00 3.67
2848 4005 3.775202 CGCTGCTCTAATAGTCTTGTGT 58.225 45.455 0.00 0.00 0.00 3.72
2849 4006 2.537625 GCGCTGCTCTAATAGTCTTGTG 59.462 50.000 0.00 0.00 0.00 3.33
2850 4007 2.482142 GGCGCTGCTCTAATAGTCTTGT 60.482 50.000 7.64 0.00 0.00 3.16
2851 4008 2.131183 GGCGCTGCTCTAATAGTCTTG 58.869 52.381 7.64 0.00 0.00 3.02
2852 4009 1.757118 TGGCGCTGCTCTAATAGTCTT 59.243 47.619 7.64 0.00 0.00 3.01
2853 4010 1.403814 TGGCGCTGCTCTAATAGTCT 58.596 50.000 7.64 0.00 0.00 3.24
2854 4011 2.131183 CTTGGCGCTGCTCTAATAGTC 58.869 52.381 7.64 0.00 0.00 2.59
2855 4012 1.808133 GCTTGGCGCTGCTCTAATAGT 60.808 52.381 7.64 0.00 35.14 2.12
2856 4013 0.864455 GCTTGGCGCTGCTCTAATAG 59.136 55.000 7.64 0.00 35.14 1.73
2857 4014 2.992089 GCTTGGCGCTGCTCTAATA 58.008 52.632 7.64 0.00 35.14 0.98
2858 4015 3.819188 GCTTGGCGCTGCTCTAAT 58.181 55.556 7.64 0.00 35.14 1.73
2870 4027 1.268899 CTTCTTGTGCCTTCAGCTTGG 59.731 52.381 0.00 0.00 44.23 3.61
2871 4028 1.335689 GCTTCTTGTGCCTTCAGCTTG 60.336 52.381 0.00 0.00 44.23 4.01
2872 4029 0.957362 GCTTCTTGTGCCTTCAGCTT 59.043 50.000 0.00 0.00 44.23 3.74
2873 4030 0.179009 TGCTTCTTGTGCCTTCAGCT 60.179 50.000 0.00 0.00 44.23 4.24
2874 4031 0.240411 CTGCTTCTTGTGCCTTCAGC 59.760 55.000 0.00 0.00 44.14 4.26
2875 4032 1.805345 CTCTGCTTCTTGTGCCTTCAG 59.195 52.381 0.00 0.00 0.00 3.02
2876 4033 1.544093 CCTCTGCTTCTTGTGCCTTCA 60.544 52.381 0.00 0.00 0.00 3.02
2877 4034 1.163554 CCTCTGCTTCTTGTGCCTTC 58.836 55.000 0.00 0.00 0.00 3.46
2878 4035 0.251077 CCCTCTGCTTCTTGTGCCTT 60.251 55.000 0.00 0.00 0.00 4.35
2879 4036 1.377994 CCCTCTGCTTCTTGTGCCT 59.622 57.895 0.00 0.00 0.00 4.75
2880 4037 1.676967 CCCCTCTGCTTCTTGTGCC 60.677 63.158 0.00 0.00 0.00 5.01
2881 4038 1.073897 ACCCCTCTGCTTCTTGTGC 59.926 57.895 0.00 0.00 0.00 4.57
2882 4039 0.397941 TCACCCCTCTGCTTCTTGTG 59.602 55.000 0.00 0.00 0.00 3.33
2883 4040 0.689623 CTCACCCCTCTGCTTCTTGT 59.310 55.000 0.00 0.00 0.00 3.16
2884 4041 0.035630 CCTCACCCCTCTGCTTCTTG 60.036 60.000 0.00 0.00 0.00 3.02
2885 4042 0.474660 ACCTCACCCCTCTGCTTCTT 60.475 55.000 0.00 0.00 0.00 2.52
2886 4043 1.159664 ACCTCACCCCTCTGCTTCT 59.840 57.895 0.00 0.00 0.00 2.85
2887 4044 1.194781 TCACCTCACCCCTCTGCTTC 61.195 60.000 0.00 0.00 0.00 3.86
2888 4045 0.768221 TTCACCTCACCCCTCTGCTT 60.768 55.000 0.00 0.00 0.00 3.91
2889 4046 0.768221 TTTCACCTCACCCCTCTGCT 60.768 55.000 0.00 0.00 0.00 4.24
2890 4047 0.606673 GTTTCACCTCACCCCTCTGC 60.607 60.000 0.00 0.00 0.00 4.26
2891 4048 1.002544 GAGTTTCACCTCACCCCTCTG 59.997 57.143 0.00 0.00 0.00 3.35
2892 4049 1.353091 GAGTTTCACCTCACCCCTCT 58.647 55.000 0.00 0.00 0.00 3.69
2893 4050 0.325272 GGAGTTTCACCTCACCCCTC 59.675 60.000 0.00 0.00 32.91 4.30
2894 4051 1.134438 GGGAGTTTCACCTCACCCCT 61.134 60.000 0.00 0.00 32.91 4.79
2895 4052 1.379146 GGGAGTTTCACCTCACCCC 59.621 63.158 0.00 0.00 32.91 4.95
2898 4055 1.003718 CGGGGGAGTTTCACCTCAC 60.004 63.158 0.00 0.00 40.68 3.51
2899 4056 2.221299 CCGGGGGAGTTTCACCTCA 61.221 63.158 0.00 0.00 40.68 3.86
2900 4057 2.669240 CCGGGGGAGTTTCACCTC 59.331 66.667 0.00 0.00 40.68 3.85
2901 4058 3.647771 GCCGGGGGAGTTTCACCT 61.648 66.667 2.18 0.00 40.68 4.00
2902 4059 3.501040 TTGCCGGGGGAGTTTCACC 62.501 63.158 2.18 0.00 39.94 4.02
2903 4060 1.971695 CTTGCCGGGGGAGTTTCAC 60.972 63.158 2.18 0.00 0.00 3.18
2904 4061 2.124507 CTCTTGCCGGGGGAGTTTCA 62.125 60.000 2.18 0.00 0.00 2.69
2905 4062 1.377333 CTCTTGCCGGGGGAGTTTC 60.377 63.158 2.18 0.00 0.00 2.78
2906 4063 2.125766 GACTCTTGCCGGGGGAGTTT 62.126 60.000 2.18 0.00 39.95 2.66
2907 4064 2.529389 ACTCTTGCCGGGGGAGTT 60.529 61.111 2.18 0.00 37.04 3.01
2908 4065 3.003763 GACTCTTGCCGGGGGAGT 61.004 66.667 2.18 0.00 42.15 3.85
2909 4066 2.294078 AAGACTCTTGCCGGGGGAG 61.294 63.158 2.18 0.00 0.00 4.30
2910 4067 2.203938 AAGACTCTTGCCGGGGGA 60.204 61.111 2.18 0.00 0.00 4.81
2911 4068 2.045926 CAAGACTCTTGCCGGGGG 60.046 66.667 2.18 0.00 0.00 5.40
2912 4069 2.747855 GCAAGACTCTTGCCGGGG 60.748 66.667 27.13 0.49 39.38 5.73
2917 4074 2.747855 CCCCGGCAAGACTCTTGC 60.748 66.667 28.77 28.77 44.22 4.01
2918 4075 0.250727 TTTCCCCGGCAAGACTCTTG 60.251 55.000 13.68 13.68 0.00 3.02
2919 4076 0.250770 GTTTCCCCGGCAAGACTCTT 60.251 55.000 0.00 0.00 0.00 2.85
2920 4077 1.128188 AGTTTCCCCGGCAAGACTCT 61.128 55.000 0.00 0.00 0.00 3.24
2921 4078 0.250770 AAGTTTCCCCGGCAAGACTC 60.251 55.000 0.00 0.00 0.00 3.36
2922 4079 0.537371 CAAGTTTCCCCGGCAAGACT 60.537 55.000 0.00 0.00 0.00 3.24
2923 4080 1.956802 CAAGTTTCCCCGGCAAGAC 59.043 57.895 0.00 0.00 0.00 3.01
2924 4081 1.901464 GCAAGTTTCCCCGGCAAGA 60.901 57.895 0.00 0.00 0.00 3.02
2925 4082 2.650778 GCAAGTTTCCCCGGCAAG 59.349 61.111 0.00 0.00 0.00 4.01
2926 4083 2.915137 GGCAAGTTTCCCCGGCAA 60.915 61.111 0.00 0.00 0.00 4.52
2927 4084 4.986708 GGGCAAGTTTCCCCGGCA 62.987 66.667 0.00 0.00 37.81 5.69
2932 4089 2.207229 GGTGTGGGGCAAGTTTCCC 61.207 63.158 1.23 1.23 43.42 3.97
2933 4090 1.045911 TTGGTGTGGGGCAAGTTTCC 61.046 55.000 0.00 0.00 0.00 3.13
2934 4091 0.104120 GTTGGTGTGGGGCAAGTTTC 59.896 55.000 0.00 0.00 0.00 2.78
2935 4092 0.616111 TGTTGGTGTGGGGCAAGTTT 60.616 50.000 0.00 0.00 0.00 2.66
2936 4093 1.000993 TGTTGGTGTGGGGCAAGTT 59.999 52.632 0.00 0.00 0.00 2.66
2937 4094 2.686632 TGTTGGTGTGGGGCAAGT 59.313 55.556 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.