Multiple sequence alignment - TraesCS1A01G237900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G237900 chr1A 100.000 4280 0 0 1 4280 423906248 423910527 0.000000e+00 7904.0
1 TraesCS1A01G237900 chr1D 96.865 2871 52 5 673 3537 323935702 323938540 0.000000e+00 4769.0
2 TraesCS1A01G237900 chr1D 95.463 551 24 1 3623 4173 323938532 323939081 0.000000e+00 878.0
3 TraesCS1A01G237900 chr1D 87.770 417 46 4 2 416 323929706 323930119 2.310000e-132 483.0
4 TraesCS1A01G237900 chr1D 85.965 171 23 1 86 256 307210621 307210452 9.450000e-42 182.0
5 TraesCS1A01G237900 chr1D 90.756 119 7 4 3528 3644 494470928 494470812 5.730000e-34 156.0
6 TraesCS1A01G237900 chr1D 71.935 367 80 18 2516 2878 389355191 389354844 7.630000e-13 86.1
7 TraesCS1A01G237900 chr1D 72.113 355 76 18 2513 2863 389808107 389808442 7.630000e-13 86.1
8 TraesCS1A01G237900 chr1D 79.208 101 19 2 2457 2556 389864868 389864769 7.680000e-08 69.4
9 TraesCS1A01G237900 chr1B 97.030 2660 62 4 639 3292 436289990 436292638 0.000000e+00 4458.0
10 TraesCS1A01G237900 chr1B 95.257 253 10 2 3287 3537 436292714 436292966 2.400000e-107 399.0
11 TraesCS1A01G237900 chr1B 95.475 221 7 2 3623 3843 436292958 436293175 2.450000e-92 350.0
12 TraesCS1A01G237900 chr1B 75.972 283 61 4 23 299 619664893 619664612 5.770000e-29 139.0
13 TraesCS1A01G237900 chr1B 81.188 101 17 2 2457 2556 522832856 522832757 3.550000e-11 80.5
14 TraesCS1A01G237900 chr1B 97.561 41 1 0 2516 2556 522770624 522770664 2.140000e-08 71.3
15 TraesCS1A01G237900 chr4D 76.044 455 82 20 53 488 459569195 459569641 1.210000e-50 211.0
16 TraesCS1A01G237900 chr4D 73.005 426 96 17 2473 2884 500469414 500469834 9.660000e-27 132.0
17 TraesCS1A01G237900 chr2A 75.730 445 90 14 53 489 699839127 699838693 1.560000e-49 207.0
18 TraesCS1A01G237900 chr2A 95.146 103 4 1 3534 3636 416627473 416627574 1.230000e-35 161.0
19 TraesCS1A01G237900 chr2D 97.143 105 3 0 3535 3639 442441937 442441833 1.220000e-40 178.0
20 TraesCS1A01G237900 chr6D 74.939 407 86 11 94 488 68329188 68328786 5.690000e-39 172.0
21 TraesCS1A01G237900 chr6B 74.051 474 100 16 23 480 213229198 213228732 5.690000e-39 172.0
22 TraesCS1A01G237900 chr6B 95.146 103 4 1 3534 3636 219879446 219879345 1.230000e-35 161.0
23 TraesCS1A01G237900 chr5A 74.105 475 98 19 23 481 565246739 565246274 5.690000e-39 172.0
24 TraesCS1A01G237900 chr5A 73.239 426 95 18 2473 2884 681386202 681386622 2.080000e-28 137.0
25 TraesCS1A01G237900 chr4A 96.078 102 4 0 3532 3633 438620903 438621004 2.650000e-37 167.0
26 TraesCS1A01G237900 chr3D 96.117 103 2 1 3534 3634 57354677 57354575 2.650000e-37 167.0
27 TraesCS1A01G237900 chr3D 95.192 104 5 0 3534 3637 613073453 613073350 9.520000e-37 165.0
28 TraesCS1A01G237900 chr6A 96.040 101 4 0 3534 3634 11165055 11165155 9.520000e-37 165.0
29 TraesCS1A01G237900 chr6A 75.238 315 55 14 151 451 562468304 562467999 1.250000e-25 128.0
30 TraesCS1A01G237900 chr3A 95.146 103 4 1 3534 3636 287684783 287684682 1.230000e-35 161.0
31 TraesCS1A01G237900 chr2B 76.744 301 56 11 23 319 87531223 87530933 5.730000e-34 156.0
32 TraesCS1A01G237900 chr4B 73.474 426 94 17 2473 2884 644095906 644096326 4.460000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G237900 chr1A 423906248 423910527 4279 False 7904.000000 7904 100.000000 1 4280 1 chr1A.!!$F1 4279
1 TraesCS1A01G237900 chr1D 323935702 323939081 3379 False 2823.500000 4769 96.164000 673 4173 2 chr1D.!!$F3 3500
2 TraesCS1A01G237900 chr1B 436289990 436293175 3185 False 1735.666667 4458 95.920667 639 3843 3 chr1B.!!$F2 3204

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
405 406 0.035881 CCGGTGATGGAGGGATGATG 59.964 60.000 0.00 0.00 0.00 3.07 F
440 441 0.098905 CGCTCGCTCTAGTGCTTGTA 59.901 55.000 14.40 0.00 0.00 2.41 F
1128 1129 0.618458 GTACCAGCCTCAACCATGGA 59.382 55.000 21.47 0.00 36.62 3.41 F
2579 2580 1.371758 CGTCGATGGTGCCTATCGG 60.372 63.158 16.60 3.28 45.46 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2160 2161 0.030504 TGTTGACGCCGTCGAAGTAA 59.969 50.000 9.11 0.0 39.41 2.24 R
2460 2461 2.956964 GAGAAGGCCGCGACGATG 60.957 66.667 8.23 0.0 0.00 3.84 R
3080 3081 0.890996 CACCTTCACCTTGAGCCACC 60.891 60.000 0.00 0.0 0.00 4.61 R
3618 3708 0.981183 TGCAATGTACTCCCTCCGTT 59.019 50.000 0.00 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.772836 TCTTACCGTTAGGAGGGCTC 58.227 55.000 0.00 0.00 41.02 4.70
20 21 1.006281 TCTTACCGTTAGGAGGGCTCA 59.994 52.381 0.00 0.00 41.02 4.26
21 22 2.040178 CTTACCGTTAGGAGGGCTCAT 58.960 52.381 0.00 0.00 41.02 2.90
22 23 1.410004 TACCGTTAGGAGGGCTCATG 58.590 55.000 0.00 0.00 41.02 3.07
23 24 1.227674 CCGTTAGGAGGGCTCATGC 60.228 63.158 0.00 0.00 41.02 4.06
24 25 1.690219 CCGTTAGGAGGGCTCATGCT 61.690 60.000 0.00 0.00 41.02 3.79
25 26 0.179000 CGTTAGGAGGGCTCATGCTT 59.821 55.000 0.00 0.00 39.59 3.91
26 27 1.808133 CGTTAGGAGGGCTCATGCTTC 60.808 57.143 0.00 0.00 39.59 3.86
27 28 1.210478 GTTAGGAGGGCTCATGCTTCA 59.790 52.381 0.00 0.00 39.59 3.02
28 29 1.811778 TAGGAGGGCTCATGCTTCAT 58.188 50.000 0.00 0.00 39.59 2.57
29 30 0.924823 AGGAGGGCTCATGCTTCATT 59.075 50.000 0.00 0.00 39.59 2.57
30 31 1.287146 AGGAGGGCTCATGCTTCATTT 59.713 47.619 0.00 0.00 39.59 2.32
31 32 2.105766 GGAGGGCTCATGCTTCATTTT 58.894 47.619 0.00 0.00 39.59 1.82
32 33 2.498885 GGAGGGCTCATGCTTCATTTTT 59.501 45.455 0.00 0.00 39.59 1.94
33 34 3.701040 GGAGGGCTCATGCTTCATTTTTA 59.299 43.478 0.00 0.00 39.59 1.52
34 35 4.202090 GGAGGGCTCATGCTTCATTTTTAG 60.202 45.833 0.00 0.00 39.59 1.85
35 36 3.703052 AGGGCTCATGCTTCATTTTTAGG 59.297 43.478 0.00 0.00 39.59 2.69
36 37 3.448660 GGGCTCATGCTTCATTTTTAGGT 59.551 43.478 0.00 0.00 39.59 3.08
37 38 4.427312 GGCTCATGCTTCATTTTTAGGTG 58.573 43.478 0.00 0.00 39.59 4.00
38 39 4.082026 GGCTCATGCTTCATTTTTAGGTGT 60.082 41.667 0.00 0.00 39.59 4.16
39 40 5.473039 GCTCATGCTTCATTTTTAGGTGTT 58.527 37.500 0.00 0.00 36.03 3.32
40 41 5.928264 GCTCATGCTTCATTTTTAGGTGTTT 59.072 36.000 0.00 0.00 36.03 2.83
41 42 6.424812 GCTCATGCTTCATTTTTAGGTGTTTT 59.575 34.615 0.00 0.00 36.03 2.43
42 43 7.041848 GCTCATGCTTCATTTTTAGGTGTTTTT 60.042 33.333 0.00 0.00 36.03 1.94
67 68 9.856162 TTTTTATCTGTTTAGGGTTTGAGTACT 57.144 29.630 0.00 0.00 0.00 2.73
72 73 8.197592 TCTGTTTAGGGTTTGAGTACTATTCA 57.802 34.615 0.00 0.00 0.00 2.57
73 74 8.311836 TCTGTTTAGGGTTTGAGTACTATTCAG 58.688 37.037 0.00 0.00 0.00 3.02
74 75 8.197592 TGTTTAGGGTTTGAGTACTATTCAGA 57.802 34.615 0.00 0.00 0.00 3.27
75 76 8.653191 TGTTTAGGGTTTGAGTACTATTCAGAA 58.347 33.333 0.00 0.00 0.00 3.02
76 77 9.498176 GTTTAGGGTTTGAGTACTATTCAGAAA 57.502 33.333 0.00 0.00 0.00 2.52
77 78 9.720769 TTTAGGGTTTGAGTACTATTCAGAAAG 57.279 33.333 0.00 0.00 0.00 2.62
78 79 6.712276 AGGGTTTGAGTACTATTCAGAAAGG 58.288 40.000 0.00 0.00 0.00 3.11
79 80 6.272558 AGGGTTTGAGTACTATTCAGAAAGGT 59.727 38.462 0.00 0.00 0.00 3.50
80 81 7.456902 AGGGTTTGAGTACTATTCAGAAAGGTA 59.543 37.037 0.00 0.00 0.00 3.08
81 82 8.098912 GGGTTTGAGTACTATTCAGAAAGGTAA 58.901 37.037 0.00 0.00 0.00 2.85
82 83 9.152595 GGTTTGAGTACTATTCAGAAAGGTAAG 57.847 37.037 0.00 0.00 0.00 2.34
83 84 9.152595 GTTTGAGTACTATTCAGAAAGGTAAGG 57.847 37.037 0.00 0.00 0.00 2.69
84 85 6.875076 TGAGTACTATTCAGAAAGGTAAGGC 58.125 40.000 0.00 0.00 0.00 4.35
85 86 5.903810 AGTACTATTCAGAAAGGTAAGGCG 58.096 41.667 0.00 0.00 0.00 5.52
86 87 5.655532 AGTACTATTCAGAAAGGTAAGGCGA 59.344 40.000 0.00 0.00 0.00 5.54
87 88 4.756502 ACTATTCAGAAAGGTAAGGCGAC 58.243 43.478 0.00 0.00 0.00 5.19
88 89 2.074547 TTCAGAAAGGTAAGGCGACG 57.925 50.000 0.00 0.00 0.00 5.12
89 90 1.250328 TCAGAAAGGTAAGGCGACGA 58.750 50.000 0.00 0.00 0.00 4.20
90 91 1.068055 TCAGAAAGGTAAGGCGACGAC 60.068 52.381 0.00 0.00 0.00 4.34
91 92 0.109412 AGAAAGGTAAGGCGACGACG 60.109 55.000 2.12 2.12 42.93 5.12
92 93 0.109597 GAAAGGTAAGGCGACGACGA 60.110 55.000 12.29 0.00 42.66 4.20
99 100 2.504244 GGCGACGACGACTTCCTG 60.504 66.667 12.29 0.00 45.04 3.86
100 101 2.559840 GCGACGACGACTTCCTGA 59.440 61.111 12.29 0.00 42.66 3.86
101 102 1.081641 GCGACGACGACTTCCTGAA 60.082 57.895 12.29 0.00 42.66 3.02
102 103 1.066114 GCGACGACGACTTCCTGAAG 61.066 60.000 12.29 5.37 42.66 3.02
103 104 0.516001 CGACGACGACTTCCTGAAGA 59.484 55.000 13.58 0.00 41.42 2.87
104 105 1.130749 CGACGACGACTTCCTGAAGAT 59.869 52.381 13.58 0.00 41.42 2.40
105 106 2.350804 CGACGACGACTTCCTGAAGATA 59.649 50.000 13.58 0.00 41.42 1.98
106 107 3.544440 CGACGACGACTTCCTGAAGATAG 60.544 52.174 13.58 6.67 41.42 2.08
107 108 3.607741 ACGACGACTTCCTGAAGATAGA 58.392 45.455 13.58 0.00 40.79 1.98
108 109 4.008330 ACGACGACTTCCTGAAGATAGAA 58.992 43.478 13.58 0.00 40.79 2.10
109 110 4.641094 ACGACGACTTCCTGAAGATAGAAT 59.359 41.667 13.58 0.00 40.79 2.40
110 111 5.821470 ACGACGACTTCCTGAAGATAGAATA 59.179 40.000 13.58 0.00 40.79 1.75
111 112 6.318144 ACGACGACTTCCTGAAGATAGAATAA 59.682 38.462 13.58 0.00 40.79 1.40
112 113 6.853872 CGACGACTTCCTGAAGATAGAATAAG 59.146 42.308 13.58 0.00 40.79 1.73
113 114 7.254829 CGACGACTTCCTGAAGATAGAATAAGA 60.255 40.741 13.58 0.00 40.79 2.10
114 115 8.472007 ACGACTTCCTGAAGATAGAATAAGAT 57.528 34.615 13.58 0.00 40.79 2.40
115 116 8.919145 ACGACTTCCTGAAGATAGAATAAGATT 58.081 33.333 13.58 0.00 40.79 2.40
116 117 9.405587 CGACTTCCTGAAGATAGAATAAGATTC 57.594 37.037 13.58 0.00 40.79 2.52
121 122 8.875168 TCCTGAAGATAGAATAAGATTCTTCCC 58.125 37.037 1.27 0.00 40.88 3.97
122 123 8.654997 CCTGAAGATAGAATAAGATTCTTCCCA 58.345 37.037 1.27 5.87 40.88 4.37
123 124 9.487790 CTGAAGATAGAATAAGATTCTTCCCAC 57.512 37.037 1.27 0.00 40.88 4.61
124 125 8.432805 TGAAGATAGAATAAGATTCTTCCCACC 58.567 37.037 1.27 0.00 40.88 4.61
125 126 8.574309 AAGATAGAATAAGATTCTTCCCACCT 57.426 34.615 1.27 0.00 0.00 4.00
126 127 9.676129 AAGATAGAATAAGATTCTTCCCACCTA 57.324 33.333 1.27 0.43 0.00 3.08
127 128 9.320295 AGATAGAATAAGATTCTTCCCACCTAG 57.680 37.037 1.27 0.00 0.00 3.02
128 129 9.095700 GATAGAATAAGATTCTTCCCACCTAGT 57.904 37.037 1.27 0.00 0.00 2.57
129 130 7.368198 AGAATAAGATTCTTCCCACCTAGTC 57.632 40.000 1.27 0.00 0.00 2.59
130 131 6.327887 AGAATAAGATTCTTCCCACCTAGTCC 59.672 42.308 1.27 0.00 0.00 3.85
131 132 2.765502 AGATTCTTCCCACCTAGTCCC 58.234 52.381 0.00 0.00 0.00 4.46
132 133 1.769465 GATTCTTCCCACCTAGTCCCC 59.231 57.143 0.00 0.00 0.00 4.81
133 134 0.616679 TTCTTCCCACCTAGTCCCCG 60.617 60.000 0.00 0.00 0.00 5.73
134 135 1.305887 CTTCCCACCTAGTCCCCGT 60.306 63.158 0.00 0.00 0.00 5.28
135 136 1.305549 TTCCCACCTAGTCCCCGTC 60.306 63.158 0.00 0.00 0.00 4.79
136 137 2.762875 CCCACCTAGTCCCCGTCC 60.763 72.222 0.00 0.00 0.00 4.79
137 138 2.762875 CCACCTAGTCCCCGTCCC 60.763 72.222 0.00 0.00 0.00 4.46
138 139 2.038329 CACCTAGTCCCCGTCCCA 59.962 66.667 0.00 0.00 0.00 4.37
139 140 2.058595 CACCTAGTCCCCGTCCCAG 61.059 68.421 0.00 0.00 0.00 4.45
140 141 3.155167 CCTAGTCCCCGTCCCAGC 61.155 72.222 0.00 0.00 0.00 4.85
141 142 3.528370 CTAGTCCCCGTCCCAGCG 61.528 72.222 0.00 0.00 0.00 5.18
148 149 4.619227 CCGTCCCAGCGGTGTGTT 62.619 66.667 14.40 0.00 46.11 3.32
149 150 2.590575 CGTCCCAGCGGTGTGTTT 60.591 61.111 14.40 0.00 0.00 2.83
150 151 2.184167 CGTCCCAGCGGTGTGTTTT 61.184 57.895 14.40 0.00 0.00 2.43
151 152 1.358759 GTCCCAGCGGTGTGTTTTG 59.641 57.895 14.40 0.00 0.00 2.44
152 153 2.027460 CCCAGCGGTGTGTTTTGC 59.973 61.111 14.40 0.00 0.00 3.68
153 154 2.780094 CCCAGCGGTGTGTTTTGCA 61.780 57.895 14.40 0.00 0.00 4.08
154 155 1.363443 CCAGCGGTGTGTTTTGCAT 59.637 52.632 14.40 0.00 0.00 3.96
155 156 0.664166 CCAGCGGTGTGTTTTGCATC 60.664 55.000 14.40 0.00 0.00 3.91
156 157 0.664166 CAGCGGTGTGTTTTGCATCC 60.664 55.000 6.41 0.00 0.00 3.51
157 158 0.823356 AGCGGTGTGTTTTGCATCCT 60.823 50.000 0.00 0.00 0.00 3.24
158 159 0.387239 GCGGTGTGTTTTGCATCCTC 60.387 55.000 0.00 0.00 0.00 3.71
159 160 0.110238 CGGTGTGTTTTGCATCCTCG 60.110 55.000 0.00 0.00 0.00 4.63
160 161 0.240945 GGTGTGTTTTGCATCCTCGG 59.759 55.000 0.00 0.00 0.00 4.63
161 162 1.234821 GTGTGTTTTGCATCCTCGGA 58.765 50.000 0.00 0.00 0.00 4.55
162 163 1.197721 GTGTGTTTTGCATCCTCGGAG 59.802 52.381 0.00 0.00 0.00 4.63
163 164 0.804989 GTGTTTTGCATCCTCGGAGG 59.195 55.000 18.25 18.25 36.46 4.30
164 165 0.322456 TGTTTTGCATCCTCGGAGGG 60.322 55.000 23.39 9.89 35.59 4.30
165 166 1.378514 TTTTGCATCCTCGGAGGGC 60.379 57.895 23.39 19.23 35.59 5.19
166 167 3.680620 TTTGCATCCTCGGAGGGCG 62.681 63.158 23.39 15.35 35.59 6.13
168 169 4.899239 GCATCCTCGGAGGGCGTG 62.899 72.222 23.39 18.96 35.59 5.34
169 170 3.461773 CATCCTCGGAGGGCGTGT 61.462 66.667 23.39 3.00 35.59 4.49
170 171 3.461773 ATCCTCGGAGGGCGTGTG 61.462 66.667 23.39 0.00 35.59 3.82
173 174 4.135153 CTCGGAGGGCGTGTGGAG 62.135 72.222 0.00 0.00 0.00 3.86
176 177 4.394712 GGAGGGCGTGTGGAGGTG 62.395 72.222 0.00 0.00 0.00 4.00
177 178 3.626924 GAGGGCGTGTGGAGGTGT 61.627 66.667 0.00 0.00 0.00 4.16
178 179 3.883744 GAGGGCGTGTGGAGGTGTG 62.884 68.421 0.00 0.00 0.00 3.82
179 180 4.250305 GGGCGTGTGGAGGTGTGT 62.250 66.667 0.00 0.00 0.00 3.72
180 181 2.665185 GGCGTGTGGAGGTGTGTC 60.665 66.667 0.00 0.00 0.00 3.67
181 182 2.421739 GCGTGTGGAGGTGTGTCT 59.578 61.111 0.00 0.00 0.00 3.41
182 183 1.227556 GCGTGTGGAGGTGTGTCTT 60.228 57.895 0.00 0.00 0.00 3.01
183 184 1.222115 GCGTGTGGAGGTGTGTCTTC 61.222 60.000 0.00 0.00 0.00 2.87
184 185 0.939577 CGTGTGGAGGTGTGTCTTCG 60.940 60.000 0.00 0.00 0.00 3.79
185 186 0.387929 GTGTGGAGGTGTGTCTTCGA 59.612 55.000 0.00 0.00 0.00 3.71
186 187 0.387929 TGTGGAGGTGTGTCTTCGAC 59.612 55.000 0.00 0.00 33.05 4.20
187 188 0.663568 GTGGAGGTGTGTCTTCGACG 60.664 60.000 0.00 0.00 34.95 5.12
188 189 1.080705 GGAGGTGTGTCTTCGACGG 60.081 63.158 0.00 0.00 34.95 4.79
189 190 1.521450 GGAGGTGTGTCTTCGACGGA 61.521 60.000 0.00 0.00 34.95 4.69
190 191 0.526662 GAGGTGTGTCTTCGACGGAT 59.473 55.000 0.00 0.00 34.95 4.18
191 192 0.526662 AGGTGTGTCTTCGACGGATC 59.473 55.000 0.00 0.00 34.95 3.36
192 193 0.458025 GGTGTGTCTTCGACGGATCC 60.458 60.000 0.00 0.00 34.95 3.36
193 194 0.458025 GTGTGTCTTCGACGGATCCC 60.458 60.000 6.06 0.00 34.95 3.85
211 212 4.446413 GCGGGATTCGGTCGGTGT 62.446 66.667 0.00 0.00 39.69 4.16
212 213 2.263540 CGGGATTCGGTCGGTGTT 59.736 61.111 0.00 0.00 34.75 3.32
213 214 1.512230 CGGGATTCGGTCGGTGTTA 59.488 57.895 0.00 0.00 34.75 2.41
214 215 0.526954 CGGGATTCGGTCGGTGTTAG 60.527 60.000 0.00 0.00 34.75 2.34
215 216 0.533951 GGGATTCGGTCGGTGTTAGT 59.466 55.000 0.00 0.00 0.00 2.24
216 217 1.470458 GGGATTCGGTCGGTGTTAGTC 60.470 57.143 0.00 0.00 0.00 2.59
217 218 1.475682 GGATTCGGTCGGTGTTAGTCT 59.524 52.381 0.00 0.00 0.00 3.24
218 219 2.094338 GGATTCGGTCGGTGTTAGTCTT 60.094 50.000 0.00 0.00 0.00 3.01
219 220 3.582780 GATTCGGTCGGTGTTAGTCTTT 58.417 45.455 0.00 0.00 0.00 2.52
220 221 3.457610 TTCGGTCGGTGTTAGTCTTTT 57.542 42.857 0.00 0.00 0.00 2.27
221 222 2.746269 TCGGTCGGTGTTAGTCTTTTG 58.254 47.619 0.00 0.00 0.00 2.44
222 223 1.796459 CGGTCGGTGTTAGTCTTTTGG 59.204 52.381 0.00 0.00 0.00 3.28
223 224 2.804212 CGGTCGGTGTTAGTCTTTTGGT 60.804 50.000 0.00 0.00 0.00 3.67
224 225 2.546789 GGTCGGTGTTAGTCTTTTGGTG 59.453 50.000 0.00 0.00 0.00 4.17
225 226 2.546789 GTCGGTGTTAGTCTTTTGGTGG 59.453 50.000 0.00 0.00 0.00 4.61
226 227 2.435069 TCGGTGTTAGTCTTTTGGTGGA 59.565 45.455 0.00 0.00 0.00 4.02
227 228 3.071892 TCGGTGTTAGTCTTTTGGTGGAT 59.928 43.478 0.00 0.00 0.00 3.41
228 229 3.818773 CGGTGTTAGTCTTTTGGTGGATT 59.181 43.478 0.00 0.00 0.00 3.01
229 230 4.277423 CGGTGTTAGTCTTTTGGTGGATTT 59.723 41.667 0.00 0.00 0.00 2.17
230 231 5.528870 GGTGTTAGTCTTTTGGTGGATTTG 58.471 41.667 0.00 0.00 0.00 2.32
231 232 4.982295 GTGTTAGTCTTTTGGTGGATTTGC 59.018 41.667 0.00 0.00 0.00 3.68
232 233 4.646945 TGTTAGTCTTTTGGTGGATTTGCA 59.353 37.500 0.00 0.00 0.00 4.08
233 234 5.304101 TGTTAGTCTTTTGGTGGATTTGCAT 59.696 36.000 0.00 0.00 0.00 3.96
234 235 4.261578 AGTCTTTTGGTGGATTTGCATG 57.738 40.909 0.00 0.00 0.00 4.06
235 236 3.007182 AGTCTTTTGGTGGATTTGCATGG 59.993 43.478 0.00 0.00 0.00 3.66
236 237 3.006752 GTCTTTTGGTGGATTTGCATGGA 59.993 43.478 0.00 0.00 0.00 3.41
237 238 3.839490 TCTTTTGGTGGATTTGCATGGAT 59.161 39.130 0.00 0.00 0.00 3.41
238 239 3.891422 TTTGGTGGATTTGCATGGATC 57.109 42.857 0.00 0.00 0.00 3.36
239 240 1.779221 TGGTGGATTTGCATGGATCC 58.221 50.000 4.20 4.20 41.78 3.36
240 241 0.670162 GGTGGATTTGCATGGATCCG 59.330 55.000 7.39 0.00 43.86 4.18
241 242 0.670162 GTGGATTTGCATGGATCCGG 59.330 55.000 7.39 0.00 43.86 5.14
242 243 0.258484 TGGATTTGCATGGATCCGGT 59.742 50.000 7.39 0.00 43.86 5.28
243 244 0.954452 GGATTTGCATGGATCCGGTC 59.046 55.000 7.39 0.00 33.12 4.79
251 252 4.515404 GGATCCGGTCCTCGTTTG 57.485 61.111 13.87 0.00 44.16 2.93
252 253 1.595357 GGATCCGGTCCTCGTTTGT 59.405 57.895 13.87 0.00 44.16 2.83
253 254 0.819582 GGATCCGGTCCTCGTTTGTA 59.180 55.000 13.87 0.00 44.16 2.41
254 255 1.411612 GGATCCGGTCCTCGTTTGTAT 59.588 52.381 13.87 0.00 44.16 2.29
255 256 2.159000 GGATCCGGTCCTCGTTTGTATT 60.159 50.000 13.87 0.00 44.16 1.89
256 257 2.660189 TCCGGTCCTCGTTTGTATTC 57.340 50.000 0.00 0.00 37.11 1.75
257 258 1.894466 TCCGGTCCTCGTTTGTATTCA 59.106 47.619 0.00 0.00 37.11 2.57
258 259 2.498481 TCCGGTCCTCGTTTGTATTCAT 59.502 45.455 0.00 0.00 37.11 2.57
259 260 2.607635 CCGGTCCTCGTTTGTATTCATG 59.392 50.000 0.00 0.00 37.11 3.07
260 261 3.259064 CGGTCCTCGTTTGTATTCATGT 58.741 45.455 0.00 0.00 0.00 3.21
261 262 3.306166 CGGTCCTCGTTTGTATTCATGTC 59.694 47.826 0.00 0.00 0.00 3.06
262 263 4.504858 GGTCCTCGTTTGTATTCATGTCT 58.495 43.478 0.00 0.00 0.00 3.41
263 264 4.935808 GGTCCTCGTTTGTATTCATGTCTT 59.064 41.667 0.00 0.00 0.00 3.01
264 265 5.063564 GGTCCTCGTTTGTATTCATGTCTTC 59.936 44.000 0.00 0.00 0.00 2.87
265 266 5.637810 GTCCTCGTTTGTATTCATGTCTTCA 59.362 40.000 0.00 0.00 0.00 3.02
266 267 5.637810 TCCTCGTTTGTATTCATGTCTTCAC 59.362 40.000 0.00 0.00 0.00 3.18
267 268 5.408299 CCTCGTTTGTATTCATGTCTTCACA 59.592 40.000 0.00 0.00 36.78 3.58
268 269 6.401474 CCTCGTTTGTATTCATGTCTTCACAG 60.401 42.308 0.00 0.00 35.41 3.66
269 270 5.408299 TCGTTTGTATTCATGTCTTCACAGG 59.592 40.000 0.00 0.00 35.41 4.00
270 271 5.179368 CGTTTGTATTCATGTCTTCACAGGT 59.821 40.000 0.00 0.00 35.71 4.00
271 272 6.293407 CGTTTGTATTCATGTCTTCACAGGTT 60.293 38.462 0.00 0.00 35.71 3.50
272 273 6.558771 TTGTATTCATGTCTTCACAGGTTG 57.441 37.500 0.00 0.00 35.71 3.77
273 274 5.003160 TGTATTCATGTCTTCACAGGTTGG 58.997 41.667 0.00 0.00 35.71 3.77
274 275 2.566833 TCATGTCTTCACAGGTTGGG 57.433 50.000 0.00 0.00 35.71 4.12
275 276 1.774254 TCATGTCTTCACAGGTTGGGT 59.226 47.619 0.00 0.00 35.71 4.51
276 277 2.154462 CATGTCTTCACAGGTTGGGTC 58.846 52.381 0.00 0.00 35.41 4.46
277 278 0.472471 TGTCTTCACAGGTTGGGTCC 59.528 55.000 0.00 0.00 0.00 4.46
278 279 0.765510 GTCTTCACAGGTTGGGTCCT 59.234 55.000 0.00 0.00 38.51 3.85
279 280 1.143073 GTCTTCACAGGTTGGGTCCTT 59.857 52.381 0.00 0.00 35.37 3.36
280 281 1.420138 TCTTCACAGGTTGGGTCCTTC 59.580 52.381 0.00 0.00 35.37 3.46
281 282 0.476771 TTCACAGGTTGGGTCCTTCC 59.523 55.000 0.00 0.00 35.37 3.46
282 283 0.696143 TCACAGGTTGGGTCCTTCCA 60.696 55.000 0.00 0.00 35.37 3.53
283 284 0.184933 CACAGGTTGGGTCCTTCCAA 59.815 55.000 0.00 0.00 43.82 3.53
284 285 1.158007 ACAGGTTGGGTCCTTCCAAT 58.842 50.000 0.00 0.00 46.97 3.16
285 286 1.075536 ACAGGTTGGGTCCTTCCAATC 59.924 52.381 0.00 0.00 46.97 2.67
288 289 3.000684 GGTTGGGTCCTTCCAATCTAC 57.999 52.381 0.00 0.00 46.97 2.59
289 290 2.307686 GGTTGGGTCCTTCCAATCTACA 59.692 50.000 0.00 0.00 46.97 2.74
290 291 3.344515 GTTGGGTCCTTCCAATCTACAC 58.655 50.000 0.00 0.00 46.97 2.90
291 292 2.915869 TGGGTCCTTCCAATCTACACT 58.084 47.619 0.00 0.00 38.11 3.55
292 293 3.256704 TGGGTCCTTCCAATCTACACTT 58.743 45.455 0.00 0.00 38.11 3.16
293 294 3.263425 TGGGTCCTTCCAATCTACACTTC 59.737 47.826 0.00 0.00 38.11 3.01
294 295 3.519913 GGGTCCTTCCAATCTACACTTCT 59.480 47.826 0.00 0.00 38.11 2.85
295 296 4.383226 GGGTCCTTCCAATCTACACTTCTC 60.383 50.000 0.00 0.00 38.11 2.87
296 297 4.468153 GGTCCTTCCAATCTACACTTCTCT 59.532 45.833 0.00 0.00 35.97 3.10
297 298 5.046231 GGTCCTTCCAATCTACACTTCTCTT 60.046 44.000 0.00 0.00 35.97 2.85
298 299 6.468543 GTCCTTCCAATCTACACTTCTCTTT 58.531 40.000 0.00 0.00 0.00 2.52
299 300 6.937465 GTCCTTCCAATCTACACTTCTCTTTT 59.063 38.462 0.00 0.00 0.00 2.27
300 301 8.095169 GTCCTTCCAATCTACACTTCTCTTTTA 58.905 37.037 0.00 0.00 0.00 1.52
301 302 8.826765 TCCTTCCAATCTACACTTCTCTTTTAT 58.173 33.333 0.00 0.00 0.00 1.40
302 303 8.887717 CCTTCCAATCTACACTTCTCTTTTATG 58.112 37.037 0.00 0.00 0.00 1.90
303 304 9.658799 CTTCCAATCTACACTTCTCTTTTATGA 57.341 33.333 0.00 0.00 0.00 2.15
304 305 9.658799 TTCCAATCTACACTTCTCTTTTATGAG 57.341 33.333 0.00 0.00 35.52 2.90
305 306 7.766278 TCCAATCTACACTTCTCTTTTATGAGC 59.234 37.037 0.00 0.00 34.29 4.26
306 307 7.254252 CCAATCTACACTTCTCTTTTATGAGCG 60.254 40.741 0.00 0.00 34.29 5.03
307 308 5.651530 TCTACACTTCTCTTTTATGAGCGG 58.348 41.667 0.00 0.00 34.29 5.52
308 309 3.003480 ACACTTCTCTTTTATGAGCGGC 58.997 45.455 0.00 0.00 34.29 6.53
309 310 2.029728 CACTTCTCTTTTATGAGCGGCG 59.970 50.000 0.51 0.51 34.29 6.46
310 311 1.594862 CTTCTCTTTTATGAGCGGCGG 59.405 52.381 9.78 0.00 34.29 6.13
311 312 0.535335 TCTCTTTTATGAGCGGCGGT 59.465 50.000 13.08 13.08 34.29 5.68
312 313 1.066430 TCTCTTTTATGAGCGGCGGTT 60.066 47.619 14.71 0.00 34.29 4.44
313 314 1.062587 CTCTTTTATGAGCGGCGGTTG 59.937 52.381 14.71 0.00 0.00 3.77
314 315 0.802494 CTTTTATGAGCGGCGGTTGT 59.198 50.000 14.71 7.76 0.00 3.32
315 316 1.199097 CTTTTATGAGCGGCGGTTGTT 59.801 47.619 14.71 3.74 0.00 2.83
316 317 0.519519 TTTATGAGCGGCGGTTGTTG 59.480 50.000 14.71 0.00 0.00 3.33
317 318 0.604243 TTATGAGCGGCGGTTGTTGT 60.604 50.000 14.71 0.44 0.00 3.32
318 319 0.604243 TATGAGCGGCGGTTGTTGTT 60.604 50.000 14.71 0.00 0.00 2.83
319 320 1.852067 ATGAGCGGCGGTTGTTGTTC 61.852 55.000 14.71 0.00 0.00 3.18
320 321 3.573489 GAGCGGCGGTTGTTGTTCG 62.573 63.158 14.71 0.00 0.00 3.95
324 325 3.018973 GCGGTTGTTGTTCGCTGA 58.981 55.556 0.00 0.00 45.16 4.26
325 326 1.574428 GCGGTTGTTGTTCGCTGAT 59.426 52.632 0.00 0.00 45.16 2.90
326 327 0.452784 GCGGTTGTTGTTCGCTGATC 60.453 55.000 0.00 0.00 45.16 2.92
327 328 1.148310 CGGTTGTTGTTCGCTGATCT 58.852 50.000 0.00 0.00 0.00 2.75
328 329 1.531149 CGGTTGTTGTTCGCTGATCTT 59.469 47.619 0.00 0.00 0.00 2.40
329 330 2.032030 CGGTTGTTGTTCGCTGATCTTT 60.032 45.455 0.00 0.00 0.00 2.52
330 331 3.555518 GGTTGTTGTTCGCTGATCTTTC 58.444 45.455 0.00 0.00 0.00 2.62
331 332 3.218398 GTTGTTGTTCGCTGATCTTTCG 58.782 45.455 0.00 0.00 0.00 3.46
332 333 1.798223 TGTTGTTCGCTGATCTTTCGG 59.202 47.619 0.00 0.00 0.00 4.30
333 334 1.128692 GTTGTTCGCTGATCTTTCGGG 59.871 52.381 0.00 0.00 0.00 5.14
334 335 0.391130 TGTTCGCTGATCTTTCGGGG 60.391 55.000 0.00 0.00 41.38 5.73
335 336 0.391263 GTTCGCTGATCTTTCGGGGT 60.391 55.000 0.00 0.00 40.95 4.95
336 337 0.108329 TTCGCTGATCTTTCGGGGTC 60.108 55.000 0.00 0.00 40.95 4.46
337 338 0.970937 TCGCTGATCTTTCGGGGTCT 60.971 55.000 0.00 0.00 40.95 3.85
338 339 0.108138 CGCTGATCTTTCGGGGTCTT 60.108 55.000 0.00 0.00 36.64 3.01
339 340 1.136305 CGCTGATCTTTCGGGGTCTTA 59.864 52.381 0.00 0.00 36.64 2.10
340 341 2.418197 CGCTGATCTTTCGGGGTCTTAA 60.418 50.000 0.00 0.00 36.64 1.85
341 342 2.937149 GCTGATCTTTCGGGGTCTTAAC 59.063 50.000 0.00 0.00 0.00 2.01
342 343 3.532542 CTGATCTTTCGGGGTCTTAACC 58.467 50.000 0.00 0.00 45.65 2.85
357 358 7.142306 GGTCTTAACCCAATGACTTTTAGAC 57.858 40.000 0.00 0.00 39.93 2.59
358 359 6.940867 GGTCTTAACCCAATGACTTTTAGACT 59.059 38.462 0.00 0.00 39.93 3.24
359 360 8.098912 GGTCTTAACCCAATGACTTTTAGACTA 58.901 37.037 0.00 0.00 39.93 2.59
360 361 9.668497 GTCTTAACCCAATGACTTTTAGACTAT 57.332 33.333 0.00 0.00 0.00 2.12
361 362 9.886132 TCTTAACCCAATGACTTTTAGACTATC 57.114 33.333 0.00 0.00 0.00 2.08
362 363 9.892130 CTTAACCCAATGACTTTTAGACTATCT 57.108 33.333 0.00 0.00 0.00 1.98
365 366 8.611051 ACCCAATGACTTTTAGACTATCTACT 57.389 34.615 0.00 0.00 0.00 2.57
366 367 9.710818 ACCCAATGACTTTTAGACTATCTACTA 57.289 33.333 0.00 0.00 0.00 1.82
388 389 8.305441 ACTAAAATAAAATTTGCTTGGTTCCG 57.695 30.769 0.00 0.00 0.00 4.30
389 390 6.552859 AAAATAAAATTTGCTTGGTTCCGG 57.447 33.333 0.00 0.00 0.00 5.14
390 391 4.882842 ATAAAATTTGCTTGGTTCCGGT 57.117 36.364 0.00 0.00 0.00 5.28
391 392 2.524569 AAATTTGCTTGGTTCCGGTG 57.475 45.000 0.00 0.00 0.00 4.94
392 393 1.698506 AATTTGCTTGGTTCCGGTGA 58.301 45.000 0.00 0.00 0.00 4.02
393 394 1.923356 ATTTGCTTGGTTCCGGTGAT 58.077 45.000 0.00 0.00 0.00 3.06
394 395 0.958091 TTTGCTTGGTTCCGGTGATG 59.042 50.000 0.00 0.00 0.00 3.07
395 396 0.893270 TTGCTTGGTTCCGGTGATGG 60.893 55.000 0.00 0.00 0.00 3.51
396 397 1.002624 GCTTGGTTCCGGTGATGGA 60.003 57.895 0.00 0.00 35.83 3.41
397 398 1.026718 GCTTGGTTCCGGTGATGGAG 61.027 60.000 0.00 0.00 39.72 3.86
398 399 0.392998 CTTGGTTCCGGTGATGGAGG 60.393 60.000 0.00 0.00 39.72 4.30
399 400 1.847798 TTGGTTCCGGTGATGGAGGG 61.848 60.000 0.00 0.00 39.72 4.30
400 401 1.993391 GGTTCCGGTGATGGAGGGA 60.993 63.158 0.00 0.00 39.72 4.20
401 402 1.345715 GGTTCCGGTGATGGAGGGAT 61.346 60.000 0.00 0.00 39.72 3.85
402 403 0.179045 GTTCCGGTGATGGAGGGATG 60.179 60.000 0.00 0.00 39.72 3.51
403 404 0.326143 TTCCGGTGATGGAGGGATGA 60.326 55.000 0.00 0.00 39.72 2.92
404 405 0.104986 TCCGGTGATGGAGGGATGAT 60.105 55.000 0.00 0.00 33.05 2.45
405 406 0.035881 CCGGTGATGGAGGGATGATG 59.964 60.000 0.00 0.00 0.00 3.07
406 407 1.051008 CGGTGATGGAGGGATGATGA 58.949 55.000 0.00 0.00 0.00 2.92
407 408 1.627329 CGGTGATGGAGGGATGATGAT 59.373 52.381 0.00 0.00 0.00 2.45
408 409 2.833943 CGGTGATGGAGGGATGATGATA 59.166 50.000 0.00 0.00 0.00 2.15
409 410 3.118847 CGGTGATGGAGGGATGATGATAG 60.119 52.174 0.00 0.00 0.00 2.08
410 411 3.370315 GGTGATGGAGGGATGATGATAGC 60.370 52.174 0.00 0.00 0.00 2.97
411 412 3.262660 GTGATGGAGGGATGATGATAGCA 59.737 47.826 0.00 0.00 0.00 3.49
412 413 3.518303 TGATGGAGGGATGATGATAGCAG 59.482 47.826 0.00 0.00 0.00 4.24
413 414 1.627329 TGGAGGGATGATGATAGCAGC 59.373 52.381 0.00 0.00 0.00 5.25
414 415 1.405256 GGAGGGATGATGATAGCAGCG 60.405 57.143 0.00 0.00 31.73 5.18
415 416 1.274728 GAGGGATGATGATAGCAGCGT 59.725 52.381 0.00 0.00 31.73 5.07
416 417 1.001746 AGGGATGATGATAGCAGCGTG 59.998 52.381 0.00 0.00 31.73 5.34
417 418 0.795085 GGATGATGATAGCAGCGTGC 59.205 55.000 0.00 0.00 45.46 5.34
418 419 0.795085 GATGATGATAGCAGCGTGCC 59.205 55.000 0.00 0.00 46.52 5.01
419 420 0.395686 ATGATGATAGCAGCGTGCCT 59.604 50.000 6.39 0.00 46.52 4.75
420 421 0.178767 TGATGATAGCAGCGTGCCTT 59.821 50.000 6.39 0.00 46.52 4.35
421 422 0.864455 GATGATAGCAGCGTGCCTTC 59.136 55.000 6.39 5.11 46.52 3.46
422 423 0.877649 ATGATAGCAGCGTGCCTTCG 60.878 55.000 6.39 0.00 46.52 3.79
430 431 4.785512 CGTGCCTTCGCTCGCTCT 62.786 66.667 0.00 0.00 44.00 4.09
431 432 2.490217 GTGCCTTCGCTCGCTCTA 59.510 61.111 0.00 0.00 35.36 2.43
432 433 1.587613 GTGCCTTCGCTCGCTCTAG 60.588 63.158 0.00 0.00 35.36 2.43
433 434 2.046864 TGCCTTCGCTCGCTCTAGT 61.047 57.895 0.00 0.00 35.36 2.57
434 435 1.587613 GCCTTCGCTCGCTCTAGTG 60.588 63.158 0.00 0.00 0.00 2.74
435 436 1.587613 CCTTCGCTCGCTCTAGTGC 60.588 63.158 6.72 6.72 0.00 4.40
436 437 1.431440 CTTCGCTCGCTCTAGTGCT 59.569 57.895 14.40 0.00 0.00 4.40
437 438 0.179150 CTTCGCTCGCTCTAGTGCTT 60.179 55.000 14.40 0.00 0.00 3.91
438 439 0.456824 TTCGCTCGCTCTAGTGCTTG 60.457 55.000 14.40 8.06 0.00 4.01
439 440 1.153939 CGCTCGCTCTAGTGCTTGT 60.154 57.895 14.40 0.00 0.00 3.16
440 441 0.098905 CGCTCGCTCTAGTGCTTGTA 59.901 55.000 14.40 0.00 0.00 2.41
441 442 1.467543 CGCTCGCTCTAGTGCTTGTAA 60.468 52.381 14.40 0.00 0.00 2.41
442 443 2.796383 CGCTCGCTCTAGTGCTTGTAAT 60.796 50.000 14.40 0.00 0.00 1.89
443 444 2.792116 GCTCGCTCTAGTGCTTGTAATC 59.208 50.000 14.40 0.00 0.00 1.75
444 445 3.735208 GCTCGCTCTAGTGCTTGTAATCA 60.735 47.826 14.40 0.00 0.00 2.57
445 446 4.615949 CTCGCTCTAGTGCTTGTAATCAT 58.384 43.478 14.40 0.00 0.00 2.45
446 447 4.611943 TCGCTCTAGTGCTTGTAATCATC 58.388 43.478 14.40 0.00 0.00 2.92
447 448 3.423536 CGCTCTAGTGCTTGTAATCATCG 59.576 47.826 14.40 0.00 0.00 3.84
448 449 4.363999 GCTCTAGTGCTTGTAATCATCGT 58.636 43.478 9.52 0.00 0.00 3.73
449 450 4.806247 GCTCTAGTGCTTGTAATCATCGTT 59.194 41.667 9.52 0.00 0.00 3.85
450 451 5.977725 GCTCTAGTGCTTGTAATCATCGTTA 59.022 40.000 9.52 0.00 0.00 3.18
451 452 6.475727 GCTCTAGTGCTTGTAATCATCGTTAA 59.524 38.462 9.52 0.00 0.00 2.01
452 453 7.010183 GCTCTAGTGCTTGTAATCATCGTTAAA 59.990 37.037 9.52 0.00 0.00 1.52
453 454 8.407457 TCTAGTGCTTGTAATCATCGTTAAAG 57.593 34.615 0.00 0.00 0.00 1.85
454 455 8.033038 TCTAGTGCTTGTAATCATCGTTAAAGT 58.967 33.333 0.00 0.00 0.00 2.66
455 456 6.831769 AGTGCTTGTAATCATCGTTAAAGTG 58.168 36.000 0.00 0.00 0.00 3.16
456 457 6.021596 GTGCTTGTAATCATCGTTAAAGTGG 58.978 40.000 0.00 0.00 0.00 4.00
457 458 5.703592 TGCTTGTAATCATCGTTAAAGTGGT 59.296 36.000 0.00 0.00 0.00 4.16
458 459 6.128391 TGCTTGTAATCATCGTTAAAGTGGTC 60.128 38.462 0.00 0.00 0.00 4.02
459 460 6.092259 GCTTGTAATCATCGTTAAAGTGGTCT 59.908 38.462 0.00 0.00 0.00 3.85
460 461 6.961359 TGTAATCATCGTTAAAGTGGTCTG 57.039 37.500 0.00 0.00 0.00 3.51
461 462 4.946784 AATCATCGTTAAAGTGGTCTGC 57.053 40.909 0.00 0.00 0.00 4.26
462 463 2.333926 TCATCGTTAAAGTGGTCTGCG 58.666 47.619 0.00 0.00 0.00 5.18
463 464 1.393539 CATCGTTAAAGTGGTCTGCGG 59.606 52.381 0.00 0.00 0.00 5.69
464 465 0.675083 TCGTTAAAGTGGTCTGCGGA 59.325 50.000 0.00 0.00 0.00 5.54
465 466 1.274167 TCGTTAAAGTGGTCTGCGGAT 59.726 47.619 0.00 0.00 0.00 4.18
466 467 2.492881 TCGTTAAAGTGGTCTGCGGATA 59.507 45.455 0.00 0.00 0.00 2.59
467 468 3.131577 TCGTTAAAGTGGTCTGCGGATAT 59.868 43.478 0.00 0.00 0.00 1.63
468 469 3.245284 CGTTAAAGTGGTCTGCGGATATG 59.755 47.826 0.00 0.00 0.00 1.78
469 470 4.189231 GTTAAAGTGGTCTGCGGATATGT 58.811 43.478 0.00 0.00 0.00 2.29
470 471 5.353938 GTTAAAGTGGTCTGCGGATATGTA 58.646 41.667 0.00 0.00 0.00 2.29
471 472 4.689612 AAAGTGGTCTGCGGATATGTAT 57.310 40.909 0.00 0.00 0.00 2.29
472 473 3.667497 AGTGGTCTGCGGATATGTATG 57.333 47.619 0.00 0.00 0.00 2.39
473 474 2.965831 AGTGGTCTGCGGATATGTATGT 59.034 45.455 0.00 0.00 0.00 2.29
474 475 4.149598 AGTGGTCTGCGGATATGTATGTA 58.850 43.478 0.00 0.00 0.00 2.29
475 476 4.587262 AGTGGTCTGCGGATATGTATGTAA 59.413 41.667 0.00 0.00 0.00 2.41
476 477 5.246203 AGTGGTCTGCGGATATGTATGTAAT 59.754 40.000 0.00 0.00 0.00 1.89
477 478 5.932303 GTGGTCTGCGGATATGTATGTAATT 59.068 40.000 0.00 0.00 0.00 1.40
478 479 6.426937 GTGGTCTGCGGATATGTATGTAATTT 59.573 38.462 0.00 0.00 0.00 1.82
479 480 6.995686 TGGTCTGCGGATATGTATGTAATTTT 59.004 34.615 0.00 0.00 0.00 1.82
480 481 7.500892 TGGTCTGCGGATATGTATGTAATTTTT 59.499 33.333 0.00 0.00 0.00 1.94
481 482 7.803189 GGTCTGCGGATATGTATGTAATTTTTG 59.197 37.037 0.00 0.00 0.00 2.44
482 483 8.342634 GTCTGCGGATATGTATGTAATTTTTGT 58.657 33.333 0.00 0.00 0.00 2.83
483 484 8.898761 TCTGCGGATATGTATGTAATTTTTGTT 58.101 29.630 0.00 0.00 0.00 2.83
528 529 3.217599 AGGCACTCATATATACGCACG 57.782 47.619 0.00 0.00 0.00 5.34
529 530 2.557056 AGGCACTCATATATACGCACGT 59.443 45.455 0.00 0.00 0.00 4.49
530 531 3.754850 AGGCACTCATATATACGCACGTA 59.245 43.478 5.24 5.24 34.87 3.57
531 532 3.850273 GGCACTCATATATACGCACGTAC 59.150 47.826 4.84 0.00 33.01 3.67
532 533 4.469552 GCACTCATATATACGCACGTACA 58.530 43.478 4.84 0.00 33.01 2.90
533 534 4.320164 GCACTCATATATACGCACGTACAC 59.680 45.833 4.84 0.00 33.01 2.90
534 535 4.849926 CACTCATATATACGCACGTACACC 59.150 45.833 4.84 0.00 33.01 4.16
535 536 4.758674 ACTCATATATACGCACGTACACCT 59.241 41.667 4.84 0.00 33.01 4.00
536 537 5.240183 ACTCATATATACGCACGTACACCTT 59.760 40.000 4.84 0.00 33.01 3.50
537 538 6.427853 ACTCATATATACGCACGTACACCTTA 59.572 38.462 4.84 0.00 33.01 2.69
538 539 7.120285 ACTCATATATACGCACGTACACCTTAT 59.880 37.037 4.84 2.30 33.01 1.73
539 540 7.819644 TCATATATACGCACGTACACCTTATT 58.180 34.615 4.84 0.00 33.01 1.40
540 541 8.298854 TCATATATACGCACGTACACCTTATTT 58.701 33.333 4.84 0.00 33.01 1.40
541 542 8.918658 CATATATACGCACGTACACCTTATTTT 58.081 33.333 4.84 0.00 33.01 1.82
542 543 7.775397 ATATACGCACGTACACCTTATTTTT 57.225 32.000 4.84 0.00 33.01 1.94
543 544 8.870160 ATATACGCACGTACACCTTATTTTTA 57.130 30.769 4.84 0.00 33.01 1.52
544 545 7.775397 ATACGCACGTACACCTTATTTTTAT 57.225 32.000 4.84 0.00 33.01 1.40
545 546 5.860641 ACGCACGTACACCTTATTTTTATG 58.139 37.500 0.00 0.00 0.00 1.90
546 547 5.638657 ACGCACGTACACCTTATTTTTATGA 59.361 36.000 0.00 0.00 0.00 2.15
547 548 6.182634 CGCACGTACACCTTATTTTTATGAG 58.817 40.000 0.00 0.00 0.00 2.90
548 549 5.963586 GCACGTACACCTTATTTTTATGAGC 59.036 40.000 0.00 0.00 0.00 4.26
549 550 6.402766 GCACGTACACCTTATTTTTATGAGCA 60.403 38.462 0.00 0.00 0.00 4.26
550 551 7.678690 GCACGTACACCTTATTTTTATGAGCAT 60.679 37.037 0.00 0.00 0.00 3.79
551 552 7.850982 CACGTACACCTTATTTTTATGAGCATC 59.149 37.037 0.00 0.00 0.00 3.91
552 553 7.769044 ACGTACACCTTATTTTTATGAGCATCT 59.231 33.333 0.00 0.00 34.92 2.90
553 554 8.612619 CGTACACCTTATTTTTATGAGCATCTT 58.387 33.333 0.00 0.00 34.92 2.40
556 557 9.643693 ACACCTTATTTTTATGAGCATCTTTTG 57.356 29.630 0.00 0.00 34.92 2.44
557 558 9.643693 CACCTTATTTTTATGAGCATCTTTTGT 57.356 29.630 0.00 0.00 34.92 2.83
558 559 9.643693 ACCTTATTTTTATGAGCATCTTTTGTG 57.356 29.630 0.00 0.00 34.92 3.33
559 560 9.643693 CCTTATTTTTATGAGCATCTTTTGTGT 57.356 29.630 0.00 0.00 34.92 3.72
563 564 9.768662 ATTTTTATGAGCATCTTTTGTGTTCTT 57.231 25.926 0.00 0.00 34.92 2.52
564 565 9.598517 TTTTTATGAGCATCTTTTGTGTTCTTT 57.401 25.926 0.00 0.00 34.92 2.52
565 566 8.578308 TTTATGAGCATCTTTTGTGTTCTTTG 57.422 30.769 0.00 0.00 34.92 2.77
566 567 4.362279 TGAGCATCTTTTGTGTTCTTTGC 58.638 39.130 0.00 0.00 34.92 3.68
567 568 4.142204 TGAGCATCTTTTGTGTTCTTTGCA 60.142 37.500 0.00 0.00 34.92 4.08
568 569 4.114794 AGCATCTTTTGTGTTCTTTGCAC 58.885 39.130 0.00 0.00 37.37 4.57
569 570 4.114794 GCATCTTTTGTGTTCTTTGCACT 58.885 39.130 0.00 0.00 37.70 4.40
570 571 4.026310 GCATCTTTTGTGTTCTTTGCACTG 60.026 41.667 0.00 0.00 37.70 3.66
571 572 4.782019 TCTTTTGTGTTCTTTGCACTGT 57.218 36.364 0.00 0.00 37.70 3.55
572 573 4.732784 TCTTTTGTGTTCTTTGCACTGTC 58.267 39.130 0.00 0.00 37.70 3.51
573 574 4.217334 TCTTTTGTGTTCTTTGCACTGTCA 59.783 37.500 0.00 0.00 37.70 3.58
574 575 4.717233 TTTGTGTTCTTTGCACTGTCAT 57.283 36.364 0.00 0.00 37.70 3.06
575 576 5.826601 TTTGTGTTCTTTGCACTGTCATA 57.173 34.783 0.00 0.00 37.70 2.15
576 577 5.826601 TTGTGTTCTTTGCACTGTCATAA 57.173 34.783 0.00 0.00 37.70 1.90
577 578 6.389830 TTGTGTTCTTTGCACTGTCATAAT 57.610 33.333 0.00 0.00 37.70 1.28
578 579 5.761003 TGTGTTCTTTGCACTGTCATAATG 58.239 37.500 0.00 0.00 37.70 1.90
579 580 5.299028 TGTGTTCTTTGCACTGTCATAATGT 59.701 36.000 0.00 0.00 37.70 2.71
580 581 6.484977 TGTGTTCTTTGCACTGTCATAATGTA 59.515 34.615 0.00 0.00 37.70 2.29
581 582 7.174772 TGTGTTCTTTGCACTGTCATAATGTAT 59.825 33.333 0.00 0.00 37.70 2.29
582 583 7.482743 GTGTTCTTTGCACTGTCATAATGTATG 59.517 37.037 0.00 0.00 34.60 2.39
583 584 7.390162 TGTTCTTTGCACTGTCATAATGTATGA 59.610 33.333 0.00 0.00 42.56 2.15
584 585 8.400947 GTTCTTTGCACTGTCATAATGTATGAT 58.599 33.333 1.51 0.00 45.96 2.45
585 586 7.922837 TCTTTGCACTGTCATAATGTATGATG 58.077 34.615 1.51 0.00 45.96 3.07
586 587 6.622833 TTGCACTGTCATAATGTATGATGG 57.377 37.500 1.51 1.52 45.96 3.51
587 588 5.927819 TGCACTGTCATAATGTATGATGGA 58.072 37.500 1.51 0.00 45.96 3.41
588 589 6.536447 TGCACTGTCATAATGTATGATGGAT 58.464 36.000 1.51 0.00 45.96 3.41
589 590 7.678837 TGCACTGTCATAATGTATGATGGATA 58.321 34.615 1.51 0.00 45.96 2.59
590 591 7.820872 TGCACTGTCATAATGTATGATGGATAG 59.179 37.037 1.51 0.00 45.96 2.08
591 592 8.037166 GCACTGTCATAATGTATGATGGATAGA 58.963 37.037 1.51 0.00 45.96 1.98
628 629 7.947782 TTTGAGGGGTATATAGATGGAAAGT 57.052 36.000 0.00 0.00 0.00 2.66
629 630 7.947782 TTGAGGGGTATATAGATGGAAAGTT 57.052 36.000 0.00 0.00 0.00 2.66
630 631 7.947782 TGAGGGGTATATAGATGGAAAGTTT 57.052 36.000 0.00 0.00 0.00 2.66
631 632 8.344939 TGAGGGGTATATAGATGGAAAGTTTT 57.655 34.615 0.00 0.00 0.00 2.43
632 633 8.787818 TGAGGGGTATATAGATGGAAAGTTTTT 58.212 33.333 0.00 0.00 0.00 1.94
666 667 5.772825 AACTGCTAAGCAAACAAGAATCA 57.227 34.783 0.00 0.00 38.41 2.57
667 668 5.972107 ACTGCTAAGCAAACAAGAATCAT 57.028 34.783 0.00 0.00 38.41 2.45
668 669 7.452880 AACTGCTAAGCAAACAAGAATCATA 57.547 32.000 0.00 0.00 38.41 2.15
669 670 6.846350 ACTGCTAAGCAAACAAGAATCATAC 58.154 36.000 0.00 0.00 38.41 2.39
670 671 6.430925 ACTGCTAAGCAAACAAGAATCATACA 59.569 34.615 0.00 0.00 38.41 2.29
671 672 6.611381 TGCTAAGCAAACAAGAATCATACAC 58.389 36.000 0.00 0.00 34.76 2.90
718 719 4.202441 CCGAAATGGAGGATCAGAATTGT 58.798 43.478 0.00 0.00 42.00 2.71
755 756 5.368256 AACATGCAAGCAAAACAAAACAA 57.632 30.435 0.00 0.00 0.00 2.83
798 799 4.370364 TGAGTCCAGAAAGCAACAAAAC 57.630 40.909 0.00 0.00 0.00 2.43
906 907 3.585289 TGTAGGAATACAGAGTGGCCAAA 59.415 43.478 7.24 0.00 0.00 3.28
939 940 9.708222 CACAGTTTGAGAAATGTATATAAGCAC 57.292 33.333 0.00 0.00 41.68 4.40
954 955 2.874019 CACCGCTTGCGCCAAATA 59.126 55.556 4.18 0.00 0.00 1.40
969 970 5.295950 CGCCAAATATTTTTCATGCCCATA 58.704 37.500 0.00 0.00 0.00 2.74
1128 1129 0.618458 GTACCAGCCTCAACCATGGA 59.382 55.000 21.47 0.00 36.62 3.41
1485 1486 2.433664 GGCGTCATCGTCGGGTTT 60.434 61.111 0.00 0.00 39.49 3.27
2160 2161 2.187946 GGCACCAGCTACTGCGAT 59.812 61.111 8.33 0.00 45.42 4.58
2579 2580 1.371758 CGTCGATGGTGCCTATCGG 60.372 63.158 16.60 3.28 45.46 4.18
2679 2680 4.394712 AAGAAGGCGCACCCGGAG 62.395 66.667 10.83 0.00 39.21 4.63
2916 2917 2.143925 GCCATGAAGACTATTACGGGC 58.856 52.381 0.00 0.00 0.00 6.13
3079 3080 4.742201 CTCACCTGGACGTGCCCG 62.742 72.222 4.04 0.00 40.83 6.13
3349 3439 6.620733 GCACAAGTATCCATACAGTTCACAAC 60.621 42.308 0.00 0.00 35.74 3.32
3439 3529 6.150976 TCACACAAATAGGGCACTTATCAAAG 59.849 38.462 0.00 0.00 38.77 2.77
3537 3627 5.260424 TCAAGCTTCTGTCTGAGAGATACT 58.740 41.667 5.26 3.65 30.18 2.12
3538 3628 5.356751 TCAAGCTTCTGTCTGAGAGATACTC 59.643 44.000 5.26 0.00 45.11 2.59
3539 3629 4.207165 AGCTTCTGTCTGAGAGATACTCC 58.793 47.826 5.26 0.00 44.34 3.85
3540 3630 3.317993 GCTTCTGTCTGAGAGATACTCCC 59.682 52.174 5.26 0.00 44.34 4.30
3541 3631 4.792068 CTTCTGTCTGAGAGATACTCCCT 58.208 47.826 5.26 0.00 44.34 4.20
3542 3632 4.431416 TCTGTCTGAGAGATACTCCCTC 57.569 50.000 0.00 0.00 44.34 4.30
3543 3633 3.137544 TCTGTCTGAGAGATACTCCCTCC 59.862 52.174 0.00 0.00 44.34 4.30
3544 3634 2.158740 TGTCTGAGAGATACTCCCTCCG 60.159 54.545 0.00 0.00 44.34 4.63
3545 3635 2.128535 TCTGAGAGATACTCCCTCCGT 58.871 52.381 0.00 0.00 44.34 4.69
3546 3636 2.105134 TCTGAGAGATACTCCCTCCGTC 59.895 54.545 0.00 0.00 44.34 4.79
3547 3637 1.143277 TGAGAGATACTCCCTCCGTCC 59.857 57.143 0.00 0.00 44.34 4.79
3548 3638 0.479378 AGAGATACTCCCTCCGTCCC 59.521 60.000 0.00 0.00 0.00 4.46
3549 3639 0.185416 GAGATACTCCCTCCGTCCCA 59.815 60.000 0.00 0.00 0.00 4.37
3550 3640 0.635009 AGATACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
3551 3641 1.007963 AGATACTCCCTCCGTCCCAAA 59.992 52.381 0.00 0.00 0.00 3.28
3552 3642 1.835531 GATACTCCCTCCGTCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
3553 3643 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3554 3644 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
3555 3645 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
3556 3646 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
3557 3647 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
3558 3648 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
3559 3649 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
3560 3650 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
3561 3651 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
3562 3652 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
3563 3653 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
3564 3654 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
3565 3655 4.154195 CCGTCCCAAAATAAGTGACTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
3566 3656 4.755123 CGTCCCAAAATAAGTGACTCAAGT 59.245 41.667 0.00 0.00 0.00 3.16
3567 3657 5.238650 CGTCCCAAAATAAGTGACTCAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
3568 3658 6.238648 CGTCCCAAAATAAGTGACTCAAGTTT 60.239 38.462 0.00 0.00 0.00 2.66
3569 3659 6.918022 GTCCCAAAATAAGTGACTCAAGTTTG 59.082 38.462 11.50 11.50 0.00 2.93
3570 3660 6.605594 TCCCAAAATAAGTGACTCAAGTTTGT 59.394 34.615 15.07 0.00 0.00 2.83
3571 3661 7.776030 TCCCAAAATAAGTGACTCAAGTTTGTA 59.224 33.333 15.07 5.29 0.00 2.41
3572 3662 7.860872 CCCAAAATAAGTGACTCAAGTTTGTAC 59.139 37.037 15.07 0.00 0.00 2.90
3573 3663 8.621286 CCAAAATAAGTGACTCAAGTTTGTACT 58.379 33.333 15.07 0.00 35.68 2.73
3579 3669 8.788325 AAGTGACTCAAGTTTGTACTAACTTT 57.212 30.769 26.14 15.97 43.85 2.66
3580 3670 8.197988 AGTGACTCAAGTTTGTACTAACTTTG 57.802 34.615 26.14 22.84 43.85 2.77
3581 3671 7.822822 AGTGACTCAAGTTTGTACTAACTTTGT 59.177 33.333 26.14 25.01 43.85 2.83
3582 3672 9.090692 GTGACTCAAGTTTGTACTAACTTTGTA 57.909 33.333 26.14 16.32 43.85 2.41
3583 3673 9.090692 TGACTCAAGTTTGTACTAACTTTGTAC 57.909 33.333 26.14 19.04 43.85 2.90
3584 3674 9.310716 GACTCAAGTTTGTACTAACTTTGTACT 57.689 33.333 26.14 11.72 43.85 2.73
3608 3698 9.310716 ACTAAAACTAGTACAAAGTTGAGTCAC 57.689 33.333 12.72 0.00 37.26 3.67
3609 3699 9.530633 CTAAAACTAGTACAAAGTTGAGTCACT 57.469 33.333 12.72 0.00 37.26 3.41
3610 3700 8.788325 AAAACTAGTACAAAGTTGAGTCACTT 57.212 30.769 12.72 0.00 38.74 3.16
3611 3701 9.880157 AAAACTAGTACAAAGTTGAGTCACTTA 57.120 29.630 12.72 0.00 35.87 2.24
3621 3711 9.370126 CAAAGTTGAGTCACTTATTTTAGAACG 57.630 33.333 0.00 0.00 35.87 3.95
3622 3712 7.653767 AGTTGAGTCACTTATTTTAGAACGG 57.346 36.000 0.00 0.00 0.00 4.44
3623 3713 7.439381 AGTTGAGTCACTTATTTTAGAACGGA 58.561 34.615 0.00 0.00 0.00 4.69
3624 3714 7.599245 AGTTGAGTCACTTATTTTAGAACGGAG 59.401 37.037 0.00 0.00 0.00 4.63
3625 3715 6.395629 TGAGTCACTTATTTTAGAACGGAGG 58.604 40.000 0.00 0.00 0.00 4.30
3626 3716 5.731591 AGTCACTTATTTTAGAACGGAGGG 58.268 41.667 0.00 0.00 0.00 4.30
3627 3717 5.482878 AGTCACTTATTTTAGAACGGAGGGA 59.517 40.000 0.00 0.00 0.00 4.20
3628 3718 5.811100 GTCACTTATTTTAGAACGGAGGGAG 59.189 44.000 0.00 0.00 0.00 4.30
3629 3719 5.482878 TCACTTATTTTAGAACGGAGGGAGT 59.517 40.000 0.00 0.00 0.00 3.85
3630 3720 6.664816 TCACTTATTTTAGAACGGAGGGAGTA 59.335 38.462 0.00 0.00 0.00 2.59
3631 3721 6.755607 CACTTATTTTAGAACGGAGGGAGTAC 59.244 42.308 0.00 0.00 0.00 2.73
3758 3848 2.169352 CTCGGACTGGAAGGTCAATGAT 59.831 50.000 0.00 0.00 39.30 2.45
3759 3849 2.093500 TCGGACTGGAAGGTCAATGATG 60.093 50.000 0.00 0.00 39.30 3.07
3783 3875 6.824196 TGTGTTACTGTTACAAAATGACCAGA 59.176 34.615 0.69 0.00 0.00 3.86
3802 3894 5.159209 CCAGACAATGAGAAAATCAGCAAC 58.841 41.667 0.00 0.00 42.53 4.17
3827 3919 3.354467 TGTTGCACATTGAGATGGCATA 58.646 40.909 0.00 0.00 38.42 3.14
3828 3920 3.129113 TGTTGCACATTGAGATGGCATAC 59.871 43.478 0.00 0.00 38.42 2.39
3843 3935 3.193903 TGGCATACGTAGTGCAGTTTAGA 59.806 43.478 22.61 0.00 45.73 2.10
3844 3936 4.142026 TGGCATACGTAGTGCAGTTTAGAT 60.142 41.667 22.61 0.00 45.73 1.98
3864 3956 6.405278 AGATCGTTTCCCAACAAAAGATTT 57.595 33.333 0.00 0.00 35.43 2.17
3900 3992 0.462759 GGAAATCCAGGCACCGAGAG 60.463 60.000 0.00 0.00 35.64 3.20
3941 4033 4.115401 TGCAAGTTAACAATGCACACAA 57.885 36.364 25.95 10.59 44.52 3.33
3942 4034 4.111198 TGCAAGTTAACAATGCACACAAG 58.889 39.130 25.95 0.00 44.52 3.16
4019 4111 7.468922 TCTGAAGATAATTACATTGCTGACG 57.531 36.000 0.00 0.00 0.00 4.35
4131 4223 6.650390 CCAAAGTCAATAAAATGGTTTCCTGG 59.350 38.462 0.00 0.00 0.00 4.45
4221 4313 8.970691 TTTTCTAATAAGATGCTCAAACAAGC 57.029 30.769 0.00 0.00 42.82 4.01
4222 4314 6.683974 TCTAATAAGATGCTCAAACAAGCC 57.316 37.500 0.00 0.00 41.77 4.35
4223 4315 6.179756 TCTAATAAGATGCTCAAACAAGCCA 58.820 36.000 0.00 0.00 41.77 4.75
4224 4316 5.726980 AATAAGATGCTCAAACAAGCCAA 57.273 34.783 0.00 0.00 41.77 4.52
4225 4317 5.927281 ATAAGATGCTCAAACAAGCCAAT 57.073 34.783 0.00 0.00 41.77 3.16
4226 4318 3.863142 AGATGCTCAAACAAGCCAATC 57.137 42.857 0.00 0.00 41.77 2.67
4227 4319 3.159472 AGATGCTCAAACAAGCCAATCA 58.841 40.909 0.00 0.00 41.77 2.57
4228 4320 3.192844 AGATGCTCAAACAAGCCAATCAG 59.807 43.478 0.00 0.00 41.77 2.90
4229 4321 1.000060 TGCTCAAACAAGCCAATCAGC 60.000 47.619 0.00 0.00 41.77 4.26
4245 4337 5.726397 CAATCAGCTTTGATTGGAAATGGA 58.274 37.500 16.98 0.00 46.75 3.41
4246 4338 6.167685 CAATCAGCTTTGATTGGAAATGGAA 58.832 36.000 16.98 0.00 46.75 3.53
4247 4339 5.804944 TCAGCTTTGATTGGAAATGGAAA 57.195 34.783 0.00 0.00 0.00 3.13
4248 4340 6.172136 TCAGCTTTGATTGGAAATGGAAAA 57.828 33.333 0.00 0.00 0.00 2.29
4249 4341 6.225318 TCAGCTTTGATTGGAAATGGAAAAG 58.775 36.000 0.00 0.00 0.00 2.27
4250 4342 4.999311 AGCTTTGATTGGAAATGGAAAAGC 59.001 37.500 8.73 8.73 45.15 3.51
4251 4343 4.154737 GCTTTGATTGGAAATGGAAAAGCC 59.845 41.667 6.05 0.00 41.19 4.35
4265 4357 6.569179 TGGAAAAGCCACAGTATTAAGAAC 57.431 37.500 0.00 0.00 43.33 3.01
4266 4358 5.475564 TGGAAAAGCCACAGTATTAAGAACC 59.524 40.000 0.00 0.00 43.33 3.62
4267 4359 5.710567 GGAAAAGCCACAGTATTAAGAACCT 59.289 40.000 0.00 0.00 36.34 3.50
4268 4360 6.882678 GGAAAAGCCACAGTATTAAGAACCTA 59.117 38.462 0.00 0.00 36.34 3.08
4269 4361 7.148289 GGAAAAGCCACAGTATTAAGAACCTAC 60.148 40.741 0.00 0.00 36.34 3.18
4270 4362 6.622427 AAGCCACAGTATTAAGAACCTACT 57.378 37.500 0.00 0.00 0.00 2.57
4271 4363 5.978814 AGCCACAGTATTAAGAACCTACTG 58.021 41.667 10.33 10.33 45.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.006281 TGAGCCCTCCTAACGGTAAGA 59.994 52.381 0.00 0.00 0.00 2.10
1 2 1.481871 TGAGCCCTCCTAACGGTAAG 58.518 55.000 0.00 0.00 0.00 2.34
2 3 1.760613 CATGAGCCCTCCTAACGGTAA 59.239 52.381 0.00 0.00 0.00 2.85
3 4 1.410004 CATGAGCCCTCCTAACGGTA 58.590 55.000 0.00 0.00 0.00 4.02
4 5 1.972660 GCATGAGCCCTCCTAACGGT 61.973 60.000 0.00 0.00 33.58 4.83
5 6 1.227674 GCATGAGCCCTCCTAACGG 60.228 63.158 0.00 0.00 33.58 4.44
6 7 0.179000 AAGCATGAGCCCTCCTAACG 59.821 55.000 0.00 0.00 43.56 3.18
7 8 1.210478 TGAAGCATGAGCCCTCCTAAC 59.790 52.381 0.00 0.00 43.56 2.34
8 9 1.583556 TGAAGCATGAGCCCTCCTAA 58.416 50.000 0.00 0.00 43.56 2.69
9 10 1.811778 ATGAAGCATGAGCCCTCCTA 58.188 50.000 0.00 0.00 43.56 2.94
10 11 0.924823 AATGAAGCATGAGCCCTCCT 59.075 50.000 0.00 0.00 43.56 3.69
11 12 1.772836 AAATGAAGCATGAGCCCTCC 58.227 50.000 0.00 0.00 43.56 4.30
12 13 3.881937 AAAAATGAAGCATGAGCCCTC 57.118 42.857 0.00 0.00 43.56 4.30
13 14 3.703052 CCTAAAAATGAAGCATGAGCCCT 59.297 43.478 0.00 0.00 43.56 5.19
14 15 3.448660 ACCTAAAAATGAAGCATGAGCCC 59.551 43.478 0.00 0.00 43.56 5.19
15 16 4.082026 ACACCTAAAAATGAAGCATGAGCC 60.082 41.667 0.00 0.00 43.56 4.70
16 17 5.064441 ACACCTAAAAATGAAGCATGAGC 57.936 39.130 0.00 0.00 42.56 4.26
17 18 7.951530 AAAACACCTAAAAATGAAGCATGAG 57.048 32.000 0.00 0.00 0.00 2.90
41 42 9.856162 AGTACTCAAACCCTAAACAGATAAAAA 57.144 29.630 0.00 0.00 0.00 1.94
46 47 8.822805 TGAATAGTACTCAAACCCTAAACAGAT 58.177 33.333 0.00 0.00 0.00 2.90
47 48 8.197592 TGAATAGTACTCAAACCCTAAACAGA 57.802 34.615 0.00 0.00 0.00 3.41
48 49 8.311836 TCTGAATAGTACTCAAACCCTAAACAG 58.688 37.037 0.00 0.00 0.00 3.16
49 50 8.197592 TCTGAATAGTACTCAAACCCTAAACA 57.802 34.615 0.00 0.00 0.00 2.83
50 51 9.498176 TTTCTGAATAGTACTCAAACCCTAAAC 57.502 33.333 0.00 0.00 0.00 2.01
51 52 9.720769 CTTTCTGAATAGTACTCAAACCCTAAA 57.279 33.333 0.00 0.00 0.00 1.85
52 53 8.319146 CCTTTCTGAATAGTACTCAAACCCTAA 58.681 37.037 0.00 0.00 0.00 2.69
53 54 7.456902 ACCTTTCTGAATAGTACTCAAACCCTA 59.543 37.037 0.00 0.00 0.00 3.53
54 55 6.272558 ACCTTTCTGAATAGTACTCAAACCCT 59.727 38.462 0.00 0.00 0.00 4.34
55 56 6.473758 ACCTTTCTGAATAGTACTCAAACCC 58.526 40.000 0.00 0.00 0.00 4.11
56 57 9.152595 CTTACCTTTCTGAATAGTACTCAAACC 57.847 37.037 0.00 0.00 0.00 3.27
57 58 9.152595 CCTTACCTTTCTGAATAGTACTCAAAC 57.847 37.037 0.00 0.00 0.00 2.93
58 59 7.822822 GCCTTACCTTTCTGAATAGTACTCAAA 59.177 37.037 0.00 0.00 0.00 2.69
59 60 7.328737 GCCTTACCTTTCTGAATAGTACTCAA 58.671 38.462 0.00 0.00 0.00 3.02
60 61 6.405508 CGCCTTACCTTTCTGAATAGTACTCA 60.406 42.308 0.00 0.00 0.00 3.41
61 62 5.978322 CGCCTTACCTTTCTGAATAGTACTC 59.022 44.000 0.00 0.00 0.00 2.59
62 63 5.655532 TCGCCTTACCTTTCTGAATAGTACT 59.344 40.000 0.00 0.00 0.00 2.73
63 64 5.747675 GTCGCCTTACCTTTCTGAATAGTAC 59.252 44.000 0.00 0.00 0.00 2.73
64 65 5.449588 CGTCGCCTTACCTTTCTGAATAGTA 60.450 44.000 0.00 0.00 0.00 1.82
65 66 4.677250 CGTCGCCTTACCTTTCTGAATAGT 60.677 45.833 0.00 0.00 0.00 2.12
66 67 3.797256 CGTCGCCTTACCTTTCTGAATAG 59.203 47.826 0.00 0.00 0.00 1.73
67 68 3.444742 TCGTCGCCTTACCTTTCTGAATA 59.555 43.478 0.00 0.00 0.00 1.75
68 69 2.232941 TCGTCGCCTTACCTTTCTGAAT 59.767 45.455 0.00 0.00 0.00 2.57
69 70 1.614903 TCGTCGCCTTACCTTTCTGAA 59.385 47.619 0.00 0.00 0.00 3.02
70 71 1.068055 GTCGTCGCCTTACCTTTCTGA 60.068 52.381 0.00 0.00 0.00 3.27
71 72 1.347320 GTCGTCGCCTTACCTTTCTG 58.653 55.000 0.00 0.00 0.00 3.02
72 73 0.109412 CGTCGTCGCCTTACCTTTCT 60.109 55.000 0.00 0.00 0.00 2.52
73 74 0.109597 TCGTCGTCGCCTTACCTTTC 60.110 55.000 0.00 0.00 36.96 2.62
74 75 0.387750 GTCGTCGTCGCCTTACCTTT 60.388 55.000 0.00 0.00 36.96 3.11
75 76 1.211190 GTCGTCGTCGCCTTACCTT 59.789 57.895 0.00 0.00 36.96 3.50
76 77 1.239968 AAGTCGTCGTCGCCTTACCT 61.240 55.000 0.00 0.00 33.52 3.08
77 78 0.796113 GAAGTCGTCGTCGCCTTACC 60.796 60.000 0.00 0.00 35.42 2.85
78 79 0.796113 GGAAGTCGTCGTCGCCTTAC 60.796 60.000 0.00 0.00 35.42 2.34
79 80 0.957395 AGGAAGTCGTCGTCGCCTTA 60.957 55.000 0.00 0.00 35.42 2.69
80 81 2.257676 GGAAGTCGTCGTCGCCTT 59.742 61.111 0.00 0.00 37.97 4.35
81 82 2.672307 AGGAAGTCGTCGTCGCCT 60.672 61.111 0.00 0.00 36.96 5.52
82 83 2.467946 TTCAGGAAGTCGTCGTCGCC 62.468 60.000 0.00 0.00 36.96 5.54
83 84 1.066114 CTTCAGGAAGTCGTCGTCGC 61.066 60.000 0.00 0.00 36.96 5.19
84 85 0.516001 TCTTCAGGAAGTCGTCGTCG 59.484 55.000 8.75 0.00 39.38 5.12
85 86 2.923605 ATCTTCAGGAAGTCGTCGTC 57.076 50.000 8.75 0.00 39.38 4.20
86 87 3.607741 TCTATCTTCAGGAAGTCGTCGT 58.392 45.455 8.75 0.00 39.38 4.34
87 88 4.617808 TTCTATCTTCAGGAAGTCGTCG 57.382 45.455 8.75 0.00 39.38 5.12
88 89 7.932335 TCTTATTCTATCTTCAGGAAGTCGTC 58.068 38.462 8.75 0.00 39.38 4.20
89 90 7.883391 TCTTATTCTATCTTCAGGAAGTCGT 57.117 36.000 8.75 0.62 39.38 4.34
90 91 9.405587 GAATCTTATTCTATCTTCAGGAAGTCG 57.594 37.037 8.75 0.23 39.38 4.18
95 96 8.875168 GGGAAGAATCTTATTCTATCTTCAGGA 58.125 37.037 13.81 0.00 44.86 3.86
96 97 8.654997 TGGGAAGAATCTTATTCTATCTTCAGG 58.345 37.037 13.81 0.00 44.86 3.86
97 98 9.487790 GTGGGAAGAATCTTATTCTATCTTCAG 57.512 37.037 13.81 0.00 44.86 3.02
98 99 8.432805 GGTGGGAAGAATCTTATTCTATCTTCA 58.567 37.037 13.81 4.58 44.86 3.02
99 100 8.655901 AGGTGGGAAGAATCTTATTCTATCTTC 58.344 37.037 0.00 5.49 43.23 2.87
100 101 8.574309 AGGTGGGAAGAATCTTATTCTATCTT 57.426 34.615 0.00 0.00 33.28 2.40
101 102 9.320295 CTAGGTGGGAAGAATCTTATTCTATCT 57.680 37.037 0.00 0.00 0.00 1.98
102 103 9.095700 ACTAGGTGGGAAGAATCTTATTCTATC 57.904 37.037 0.00 3.86 0.00 2.08
103 104 9.095700 GACTAGGTGGGAAGAATCTTATTCTAT 57.904 37.037 0.00 0.00 0.00 1.98
104 105 7.509659 GGACTAGGTGGGAAGAATCTTATTCTA 59.490 40.741 0.00 0.00 0.00 2.10
105 106 6.327887 GGACTAGGTGGGAAGAATCTTATTCT 59.672 42.308 0.00 0.00 0.00 2.40
106 107 6.464607 GGGACTAGGTGGGAAGAATCTTATTC 60.465 46.154 0.00 0.00 0.00 1.75
107 108 5.369993 GGGACTAGGTGGGAAGAATCTTATT 59.630 44.000 0.00 0.00 0.00 1.40
108 109 4.908481 GGGACTAGGTGGGAAGAATCTTAT 59.092 45.833 0.00 0.00 0.00 1.73
109 110 4.296056 GGGACTAGGTGGGAAGAATCTTA 58.704 47.826 0.00 0.00 0.00 2.10
110 111 3.116174 GGGACTAGGTGGGAAGAATCTT 58.884 50.000 0.00 0.00 0.00 2.40
111 112 2.629909 GGGGACTAGGTGGGAAGAATCT 60.630 54.545 0.00 0.00 0.00 2.40
112 113 1.769465 GGGGACTAGGTGGGAAGAATC 59.231 57.143 0.00 0.00 0.00 2.52
113 114 1.894699 GGGGACTAGGTGGGAAGAAT 58.105 55.000 0.00 0.00 0.00 2.40
114 115 0.616679 CGGGGACTAGGTGGGAAGAA 60.617 60.000 0.00 0.00 0.00 2.52
115 116 1.001248 CGGGGACTAGGTGGGAAGA 59.999 63.158 0.00 0.00 0.00 2.87
116 117 1.305887 ACGGGGACTAGGTGGGAAG 60.306 63.158 0.00 0.00 0.00 3.46
117 118 1.305549 GACGGGGACTAGGTGGGAA 60.306 63.158 0.00 0.00 0.00 3.97
118 119 2.361771 GACGGGGACTAGGTGGGA 59.638 66.667 0.00 0.00 0.00 4.37
119 120 2.762875 GGACGGGGACTAGGTGGG 60.763 72.222 0.00 0.00 0.00 4.61
120 121 2.762875 GGGACGGGGACTAGGTGG 60.763 72.222 0.00 0.00 0.00 4.61
121 122 2.038329 TGGGACGGGGACTAGGTG 59.962 66.667 0.00 0.00 0.00 4.00
122 123 2.363361 CTGGGACGGGGACTAGGT 59.637 66.667 0.00 0.00 0.00 3.08
123 124 3.155167 GCTGGGACGGGGACTAGG 61.155 72.222 0.00 0.00 33.56 3.02
132 133 2.184167 AAAACACACCGCTGGGACG 61.184 57.895 0.00 0.00 36.97 4.79
133 134 1.358759 CAAAACACACCGCTGGGAC 59.641 57.895 0.00 0.00 36.97 4.46
134 135 2.485795 GCAAAACACACCGCTGGGA 61.486 57.895 0.00 0.00 36.97 4.37
135 136 2.027460 GCAAAACACACCGCTGGG 59.973 61.111 0.00 0.00 40.11 4.45
136 137 0.664166 GATGCAAAACACACCGCTGG 60.664 55.000 0.00 0.00 0.00 4.85
137 138 0.664166 GGATGCAAAACACACCGCTG 60.664 55.000 0.00 0.00 0.00 5.18
138 139 0.823356 AGGATGCAAAACACACCGCT 60.823 50.000 0.00 0.00 34.44 5.52
139 140 0.387239 GAGGATGCAAAACACACCGC 60.387 55.000 0.00 0.00 34.44 5.68
140 141 0.110238 CGAGGATGCAAAACACACCG 60.110 55.000 0.00 0.00 34.44 4.94
141 142 0.240945 CCGAGGATGCAAAACACACC 59.759 55.000 0.00 0.00 0.00 4.16
142 143 1.197721 CTCCGAGGATGCAAAACACAC 59.802 52.381 0.00 0.00 0.00 3.82
143 144 1.522668 CTCCGAGGATGCAAAACACA 58.477 50.000 0.00 0.00 0.00 3.72
144 145 0.804989 CCTCCGAGGATGCAAAACAC 59.195 55.000 9.01 0.00 37.67 3.32
145 146 0.322456 CCCTCCGAGGATGCAAAACA 60.322 55.000 16.69 0.00 37.67 2.83
146 147 1.657751 GCCCTCCGAGGATGCAAAAC 61.658 60.000 16.69 0.00 37.67 2.43
147 148 1.378514 GCCCTCCGAGGATGCAAAA 60.379 57.895 16.69 0.00 37.67 2.44
148 149 2.272146 GCCCTCCGAGGATGCAAA 59.728 61.111 16.69 0.00 37.67 3.68
149 150 4.161295 CGCCCTCCGAGGATGCAA 62.161 66.667 16.69 0.00 37.67 4.08
151 152 4.899239 CACGCCCTCCGAGGATGC 62.899 72.222 16.69 10.57 37.67 3.91
152 153 3.461773 ACACGCCCTCCGAGGATG 61.462 66.667 16.69 12.84 37.67 3.51
153 154 3.461773 CACACGCCCTCCGAGGAT 61.462 66.667 16.69 0.00 37.67 3.24
156 157 4.135153 CTCCACACGCCCTCCGAG 62.135 72.222 0.00 0.00 41.02 4.63
159 160 4.394712 CACCTCCACACGCCCTCC 62.395 72.222 0.00 0.00 0.00 4.30
160 161 3.626924 ACACCTCCACACGCCCTC 61.627 66.667 0.00 0.00 0.00 4.30
161 162 3.941188 CACACCTCCACACGCCCT 61.941 66.667 0.00 0.00 0.00 5.19
162 163 4.250305 ACACACCTCCACACGCCC 62.250 66.667 0.00 0.00 0.00 6.13
163 164 2.660258 AAGACACACCTCCACACGCC 62.660 60.000 0.00 0.00 0.00 5.68
164 165 1.222115 GAAGACACACCTCCACACGC 61.222 60.000 0.00 0.00 0.00 5.34
165 166 0.939577 CGAAGACACACCTCCACACG 60.940 60.000 0.00 0.00 0.00 4.49
166 167 0.387929 TCGAAGACACACCTCCACAC 59.612 55.000 0.00 0.00 0.00 3.82
167 168 2.815384 TCGAAGACACACCTCCACA 58.185 52.632 0.00 0.00 0.00 4.17
194 195 2.561549 TAACACCGACCGAATCCCGC 62.562 60.000 0.00 0.00 36.84 6.13
195 196 0.526954 CTAACACCGACCGAATCCCG 60.527 60.000 0.00 0.00 38.18 5.14
196 197 0.533951 ACTAACACCGACCGAATCCC 59.466 55.000 0.00 0.00 0.00 3.85
197 198 1.475682 AGACTAACACCGACCGAATCC 59.524 52.381 0.00 0.00 0.00 3.01
198 199 2.935481 AGACTAACACCGACCGAATC 57.065 50.000 0.00 0.00 0.00 2.52
199 200 3.672767 AAAGACTAACACCGACCGAAT 57.327 42.857 0.00 0.00 0.00 3.34
200 201 3.125316 CAAAAGACTAACACCGACCGAA 58.875 45.455 0.00 0.00 0.00 4.30
201 202 2.546373 CCAAAAGACTAACACCGACCGA 60.546 50.000 0.00 0.00 0.00 4.69
202 203 1.796459 CCAAAAGACTAACACCGACCG 59.204 52.381 0.00 0.00 0.00 4.79
203 204 2.546789 CACCAAAAGACTAACACCGACC 59.453 50.000 0.00 0.00 0.00 4.79
204 205 2.546789 CCACCAAAAGACTAACACCGAC 59.453 50.000 0.00 0.00 0.00 4.79
205 206 2.435069 TCCACCAAAAGACTAACACCGA 59.565 45.455 0.00 0.00 0.00 4.69
206 207 2.841215 TCCACCAAAAGACTAACACCG 58.159 47.619 0.00 0.00 0.00 4.94
207 208 5.528870 CAAATCCACCAAAAGACTAACACC 58.471 41.667 0.00 0.00 0.00 4.16
208 209 4.982295 GCAAATCCACCAAAAGACTAACAC 59.018 41.667 0.00 0.00 0.00 3.32
209 210 4.646945 TGCAAATCCACCAAAAGACTAACA 59.353 37.500 0.00 0.00 0.00 2.41
210 211 5.195001 TGCAAATCCACCAAAAGACTAAC 57.805 39.130 0.00 0.00 0.00 2.34
211 212 5.279406 CCATGCAAATCCACCAAAAGACTAA 60.279 40.000 0.00 0.00 0.00 2.24
212 213 4.220382 CCATGCAAATCCACCAAAAGACTA 59.780 41.667 0.00 0.00 0.00 2.59
213 214 3.007182 CCATGCAAATCCACCAAAAGACT 59.993 43.478 0.00 0.00 0.00 3.24
214 215 3.006752 TCCATGCAAATCCACCAAAAGAC 59.993 43.478 0.00 0.00 0.00 3.01
215 216 3.237746 TCCATGCAAATCCACCAAAAGA 58.762 40.909 0.00 0.00 0.00 2.52
216 217 3.681593 TCCATGCAAATCCACCAAAAG 57.318 42.857 0.00 0.00 0.00 2.27
217 218 3.055240 GGATCCATGCAAATCCACCAAAA 60.055 43.478 16.97 0.00 41.02 2.44
218 219 2.500910 GGATCCATGCAAATCCACCAAA 59.499 45.455 16.97 0.00 41.02 3.28
219 220 2.109774 GGATCCATGCAAATCCACCAA 58.890 47.619 16.97 0.00 41.02 3.67
220 221 1.779221 GGATCCATGCAAATCCACCA 58.221 50.000 16.97 0.00 41.02 4.17
221 222 0.670162 CGGATCCATGCAAATCCACC 59.330 55.000 20.04 7.67 41.35 4.61
222 223 0.670162 CCGGATCCATGCAAATCCAC 59.330 55.000 20.04 0.73 41.35 4.02
223 224 0.258484 ACCGGATCCATGCAAATCCA 59.742 50.000 9.46 0.00 41.35 3.41
224 225 0.954452 GACCGGATCCATGCAAATCC 59.046 55.000 9.46 13.49 38.47 3.01
235 236 2.884894 ATACAAACGAGGACCGGATC 57.115 50.000 9.46 1.18 43.93 3.36
236 237 2.498481 TGAATACAAACGAGGACCGGAT 59.502 45.455 9.46 0.00 43.93 4.18
237 238 1.894466 TGAATACAAACGAGGACCGGA 59.106 47.619 9.46 0.00 43.93 5.14
238 239 2.373540 TGAATACAAACGAGGACCGG 57.626 50.000 0.00 0.00 43.93 5.28
239 240 3.259064 ACATGAATACAAACGAGGACCG 58.741 45.455 0.00 0.00 45.44 4.79
240 241 4.504858 AGACATGAATACAAACGAGGACC 58.495 43.478 0.00 0.00 0.00 4.46
241 242 5.637810 TGAAGACATGAATACAAACGAGGAC 59.362 40.000 0.00 0.00 0.00 3.85
242 243 5.637810 GTGAAGACATGAATACAAACGAGGA 59.362 40.000 0.00 0.00 0.00 3.71
243 244 5.408299 TGTGAAGACATGAATACAAACGAGG 59.592 40.000 0.00 0.00 0.00 4.63
244 245 6.401474 CCTGTGAAGACATGAATACAAACGAG 60.401 42.308 0.00 0.00 0.00 4.18
245 246 5.408299 CCTGTGAAGACATGAATACAAACGA 59.592 40.000 0.00 0.00 0.00 3.85
246 247 5.179368 ACCTGTGAAGACATGAATACAAACG 59.821 40.000 0.00 0.00 0.00 3.60
247 248 6.560253 ACCTGTGAAGACATGAATACAAAC 57.440 37.500 0.00 0.00 0.00 2.93
248 249 6.016360 CCAACCTGTGAAGACATGAATACAAA 60.016 38.462 0.00 0.00 0.00 2.83
249 250 5.473162 CCAACCTGTGAAGACATGAATACAA 59.527 40.000 0.00 0.00 0.00 2.41
250 251 5.003160 CCAACCTGTGAAGACATGAATACA 58.997 41.667 0.00 0.00 0.00 2.29
251 252 4.396166 CCCAACCTGTGAAGACATGAATAC 59.604 45.833 0.00 0.00 0.00 1.89
252 253 4.042809 ACCCAACCTGTGAAGACATGAATA 59.957 41.667 0.00 0.00 0.00 1.75
253 254 3.181429 ACCCAACCTGTGAAGACATGAAT 60.181 43.478 0.00 0.00 0.00 2.57
254 255 2.174639 ACCCAACCTGTGAAGACATGAA 59.825 45.455 0.00 0.00 0.00 2.57
255 256 1.774254 ACCCAACCTGTGAAGACATGA 59.226 47.619 0.00 0.00 0.00 3.07
256 257 2.154462 GACCCAACCTGTGAAGACATG 58.846 52.381 0.00 0.00 0.00 3.21
257 258 1.073923 GGACCCAACCTGTGAAGACAT 59.926 52.381 0.00 0.00 0.00 3.06
258 259 0.472471 GGACCCAACCTGTGAAGACA 59.528 55.000 0.00 0.00 0.00 3.41
259 260 0.765510 AGGACCCAACCTGTGAAGAC 59.234 55.000 0.00 0.00 39.01 3.01
260 261 1.420138 GAAGGACCCAACCTGTGAAGA 59.580 52.381 0.00 0.00 40.49 2.87
261 262 1.545651 GGAAGGACCCAACCTGTGAAG 60.546 57.143 0.00 0.00 40.49 3.02
262 263 0.476771 GGAAGGACCCAACCTGTGAA 59.523 55.000 0.00 0.00 40.49 3.18
263 264 0.696143 TGGAAGGACCCAACCTGTGA 60.696 55.000 0.00 0.00 40.49 3.58
264 265 0.184933 TTGGAAGGACCCAACCTGTG 59.815 55.000 0.00 0.00 40.99 3.66
265 266 2.640473 TTGGAAGGACCCAACCTGT 58.360 52.632 0.00 0.00 40.99 4.00
271 272 2.915869 AGTGTAGATTGGAAGGACCCA 58.084 47.619 0.00 0.00 38.00 4.51
272 273 3.519913 AGAAGTGTAGATTGGAAGGACCC 59.480 47.826 0.00 0.00 38.00 4.46
273 274 4.468153 AGAGAAGTGTAGATTGGAAGGACC 59.532 45.833 0.00 0.00 39.54 4.46
274 275 5.669164 AGAGAAGTGTAGATTGGAAGGAC 57.331 43.478 0.00 0.00 0.00 3.85
275 276 6.688073 AAAGAGAAGTGTAGATTGGAAGGA 57.312 37.500 0.00 0.00 0.00 3.36
276 277 8.887717 CATAAAAGAGAAGTGTAGATTGGAAGG 58.112 37.037 0.00 0.00 0.00 3.46
277 278 9.658799 TCATAAAAGAGAAGTGTAGATTGGAAG 57.341 33.333 0.00 0.00 0.00 3.46
278 279 9.658799 CTCATAAAAGAGAAGTGTAGATTGGAA 57.341 33.333 0.00 0.00 37.87 3.53
279 280 7.766278 GCTCATAAAAGAGAAGTGTAGATTGGA 59.234 37.037 0.00 0.00 37.87 3.53
280 281 7.254252 CGCTCATAAAAGAGAAGTGTAGATTGG 60.254 40.741 0.00 0.00 37.87 3.16
281 282 7.254252 CCGCTCATAAAAGAGAAGTGTAGATTG 60.254 40.741 0.00 0.00 37.87 2.67
282 283 6.758886 CCGCTCATAAAAGAGAAGTGTAGATT 59.241 38.462 0.00 0.00 37.87 2.40
283 284 6.276847 CCGCTCATAAAAGAGAAGTGTAGAT 58.723 40.000 0.00 0.00 37.87 1.98
284 285 5.651530 CCGCTCATAAAAGAGAAGTGTAGA 58.348 41.667 0.00 0.00 37.87 2.59
285 286 4.268884 GCCGCTCATAAAAGAGAAGTGTAG 59.731 45.833 0.00 0.00 37.87 2.74
286 287 4.181578 GCCGCTCATAAAAGAGAAGTGTA 58.818 43.478 0.00 0.00 37.87 2.90
287 288 3.003480 GCCGCTCATAAAAGAGAAGTGT 58.997 45.455 0.00 0.00 37.87 3.55
288 289 2.029728 CGCCGCTCATAAAAGAGAAGTG 59.970 50.000 0.00 0.00 37.87 3.16
289 290 2.271800 CGCCGCTCATAAAAGAGAAGT 58.728 47.619 0.00 0.00 37.87 3.01
290 291 1.594862 CCGCCGCTCATAAAAGAGAAG 59.405 52.381 0.00 0.00 37.87 2.85
291 292 1.066430 ACCGCCGCTCATAAAAGAGAA 60.066 47.619 0.00 0.00 37.87 2.87
292 293 0.535335 ACCGCCGCTCATAAAAGAGA 59.465 50.000 0.00 0.00 37.87 3.10
293 294 1.062587 CAACCGCCGCTCATAAAAGAG 59.937 52.381 0.00 0.00 38.68 2.85
294 295 1.083489 CAACCGCCGCTCATAAAAGA 58.917 50.000 0.00 0.00 0.00 2.52
295 296 0.802494 ACAACCGCCGCTCATAAAAG 59.198 50.000 0.00 0.00 0.00 2.27
296 297 1.068885 CAACAACCGCCGCTCATAAAA 60.069 47.619 0.00 0.00 0.00 1.52
297 298 0.519519 CAACAACCGCCGCTCATAAA 59.480 50.000 0.00 0.00 0.00 1.40
298 299 0.604243 ACAACAACCGCCGCTCATAA 60.604 50.000 0.00 0.00 0.00 1.90
299 300 0.604243 AACAACAACCGCCGCTCATA 60.604 50.000 0.00 0.00 0.00 2.15
300 301 1.852067 GAACAACAACCGCCGCTCAT 61.852 55.000 0.00 0.00 0.00 2.90
301 302 2.515057 AACAACAACCGCCGCTCA 60.515 55.556 0.00 0.00 0.00 4.26
302 303 2.251371 GAACAACAACCGCCGCTC 59.749 61.111 0.00 0.00 0.00 5.03
303 304 3.645975 CGAACAACAACCGCCGCT 61.646 61.111 0.00 0.00 0.00 5.52
308 309 1.148310 AGATCAGCGAACAACAACCG 58.852 50.000 0.00 0.00 0.00 4.44
309 310 3.555518 GAAAGATCAGCGAACAACAACC 58.444 45.455 0.00 0.00 0.00 3.77
310 311 3.218398 CGAAAGATCAGCGAACAACAAC 58.782 45.455 0.00 0.00 0.00 3.32
311 312 2.223144 CCGAAAGATCAGCGAACAACAA 59.777 45.455 0.00 0.00 0.00 2.83
312 313 1.798223 CCGAAAGATCAGCGAACAACA 59.202 47.619 0.00 0.00 0.00 3.33
313 314 1.128692 CCCGAAAGATCAGCGAACAAC 59.871 52.381 0.00 0.00 0.00 3.32
314 315 1.438651 CCCGAAAGATCAGCGAACAA 58.561 50.000 0.00 0.00 0.00 2.83
315 316 0.391130 CCCCGAAAGATCAGCGAACA 60.391 55.000 0.00 0.00 0.00 3.18
316 317 0.391263 ACCCCGAAAGATCAGCGAAC 60.391 55.000 0.00 0.00 0.00 3.95
317 318 0.108329 GACCCCGAAAGATCAGCGAA 60.108 55.000 0.00 0.00 0.00 4.70
318 319 0.970937 AGACCCCGAAAGATCAGCGA 60.971 55.000 0.00 0.00 0.00 4.93
319 320 0.108138 AAGACCCCGAAAGATCAGCG 60.108 55.000 0.00 0.00 0.00 5.18
320 321 2.937149 GTTAAGACCCCGAAAGATCAGC 59.063 50.000 0.00 0.00 0.00 4.26
321 322 3.532542 GGTTAAGACCCCGAAAGATCAG 58.467 50.000 0.00 0.00 40.25 2.90
322 323 3.622166 GGTTAAGACCCCGAAAGATCA 57.378 47.619 0.00 0.00 40.25 2.92
333 334 6.940867 AGTCTAAAAGTCATTGGGTTAAGACC 59.059 38.462 0.00 0.00 45.75 3.85
334 335 7.981102 AGTCTAAAAGTCATTGGGTTAAGAC 57.019 36.000 0.00 0.00 0.00 3.01
335 336 9.886132 GATAGTCTAAAAGTCATTGGGTTAAGA 57.114 33.333 0.00 0.00 0.00 2.10
336 337 9.892130 AGATAGTCTAAAAGTCATTGGGTTAAG 57.108 33.333 0.00 0.00 0.00 1.85
339 340 9.047947 AGTAGATAGTCTAAAAGTCATTGGGTT 57.952 33.333 0.00 0.00 29.58 4.11
340 341 8.611051 AGTAGATAGTCTAAAAGTCATTGGGT 57.389 34.615 0.00 0.00 29.58 4.51
362 363 9.413048 CGGAACCAAGCAAATTTTATTTTAGTA 57.587 29.630 0.00 0.00 0.00 1.82
363 364 7.386573 CCGGAACCAAGCAAATTTTATTTTAGT 59.613 33.333 0.00 0.00 0.00 2.24
364 365 7.386573 ACCGGAACCAAGCAAATTTTATTTTAG 59.613 33.333 9.46 0.00 0.00 1.85
365 366 7.171678 CACCGGAACCAAGCAAATTTTATTTTA 59.828 33.333 9.46 0.00 0.00 1.52
366 367 6.017523 CACCGGAACCAAGCAAATTTTATTTT 60.018 34.615 9.46 0.00 0.00 1.82
367 368 5.468409 CACCGGAACCAAGCAAATTTTATTT 59.532 36.000 9.46 0.00 0.00 1.40
368 369 4.994217 CACCGGAACCAAGCAAATTTTATT 59.006 37.500 9.46 0.00 0.00 1.40
369 370 4.282195 TCACCGGAACCAAGCAAATTTTAT 59.718 37.500 9.46 0.00 0.00 1.40
370 371 3.637229 TCACCGGAACCAAGCAAATTTTA 59.363 39.130 9.46 0.00 0.00 1.52
371 372 2.432510 TCACCGGAACCAAGCAAATTTT 59.567 40.909 9.46 0.00 0.00 1.82
372 373 2.035632 TCACCGGAACCAAGCAAATTT 58.964 42.857 9.46 0.00 0.00 1.82
373 374 1.698506 TCACCGGAACCAAGCAAATT 58.301 45.000 9.46 0.00 0.00 1.82
374 375 1.545582 CATCACCGGAACCAAGCAAAT 59.454 47.619 9.46 0.00 0.00 2.32
375 376 0.958091 CATCACCGGAACCAAGCAAA 59.042 50.000 9.46 0.00 0.00 3.68
376 377 0.893270 CCATCACCGGAACCAAGCAA 60.893 55.000 9.46 0.00 0.00 3.91
377 378 1.303236 CCATCACCGGAACCAAGCA 60.303 57.895 9.46 0.00 0.00 3.91
378 379 1.002624 TCCATCACCGGAACCAAGC 60.003 57.895 9.46 0.00 29.93 4.01
379 380 0.392998 CCTCCATCACCGGAACCAAG 60.393 60.000 9.46 0.00 33.65 3.61
380 381 1.682849 CCTCCATCACCGGAACCAA 59.317 57.895 9.46 0.00 33.65 3.67
381 382 2.297895 CCCTCCATCACCGGAACCA 61.298 63.158 9.46 0.00 33.65 3.67
382 383 1.345715 ATCCCTCCATCACCGGAACC 61.346 60.000 9.46 0.00 33.65 3.62
383 384 0.179045 CATCCCTCCATCACCGGAAC 60.179 60.000 9.46 0.00 33.65 3.62
384 385 0.326143 TCATCCCTCCATCACCGGAA 60.326 55.000 9.46 0.00 33.65 4.30
385 386 0.104986 ATCATCCCTCCATCACCGGA 60.105 55.000 9.46 0.00 0.00 5.14
386 387 0.035881 CATCATCCCTCCATCACCGG 59.964 60.000 0.00 0.00 0.00 5.28
387 388 1.051008 TCATCATCCCTCCATCACCG 58.949 55.000 0.00 0.00 0.00 4.94
388 389 3.370315 GCTATCATCATCCCTCCATCACC 60.370 52.174 0.00 0.00 0.00 4.02
389 390 3.262660 TGCTATCATCATCCCTCCATCAC 59.737 47.826 0.00 0.00 0.00 3.06
390 391 3.518303 CTGCTATCATCATCCCTCCATCA 59.482 47.826 0.00 0.00 0.00 3.07
391 392 3.682155 GCTGCTATCATCATCCCTCCATC 60.682 52.174 0.00 0.00 0.00 3.51
392 393 2.239150 GCTGCTATCATCATCCCTCCAT 59.761 50.000 0.00 0.00 0.00 3.41
393 394 1.627329 GCTGCTATCATCATCCCTCCA 59.373 52.381 0.00 0.00 0.00 3.86
394 395 1.405256 CGCTGCTATCATCATCCCTCC 60.405 57.143 0.00 0.00 0.00 4.30
395 396 1.274728 ACGCTGCTATCATCATCCCTC 59.725 52.381 0.00 0.00 0.00 4.30
396 397 1.001746 CACGCTGCTATCATCATCCCT 59.998 52.381 0.00 0.00 0.00 4.20
397 398 1.436600 CACGCTGCTATCATCATCCC 58.563 55.000 0.00 0.00 0.00 3.85
398 399 0.795085 GCACGCTGCTATCATCATCC 59.205 55.000 0.00 0.00 40.96 3.51
399 400 0.795085 GGCACGCTGCTATCATCATC 59.205 55.000 9.31 0.00 44.28 2.92
400 401 0.395686 AGGCACGCTGCTATCATCAT 59.604 50.000 9.31 0.00 44.28 2.45
401 402 0.178767 AAGGCACGCTGCTATCATCA 59.821 50.000 9.31 0.00 44.28 3.07
402 403 0.864455 GAAGGCACGCTGCTATCATC 59.136 55.000 9.31 0.21 44.28 2.92
403 404 0.877649 CGAAGGCACGCTGCTATCAT 60.878 55.000 9.31 0.00 44.28 2.45
404 405 1.519234 CGAAGGCACGCTGCTATCA 60.519 57.895 9.31 0.00 44.28 2.15
405 406 3.313750 CGAAGGCACGCTGCTATC 58.686 61.111 9.31 7.38 44.28 2.08
414 415 1.587613 CTAGAGCGAGCGAAGGCAC 60.588 63.158 0.00 0.00 43.41 5.01
415 416 2.046864 ACTAGAGCGAGCGAAGGCA 61.047 57.895 0.00 0.00 43.41 4.75
416 417 1.587613 CACTAGAGCGAGCGAAGGC 60.588 63.158 0.00 0.00 40.37 4.35
417 418 1.587613 GCACTAGAGCGAGCGAAGG 60.588 63.158 0.00 0.00 0.00 3.46
418 419 0.179150 AAGCACTAGAGCGAGCGAAG 60.179 55.000 6.51 0.00 40.15 3.79
419 420 0.456824 CAAGCACTAGAGCGAGCGAA 60.457 55.000 6.51 0.00 40.15 4.70
420 421 1.137614 CAAGCACTAGAGCGAGCGA 59.862 57.895 6.51 0.00 40.15 4.93
421 422 0.098905 TACAAGCACTAGAGCGAGCG 59.901 55.000 6.51 0.00 40.15 5.03
422 423 2.279582 TTACAAGCACTAGAGCGAGC 57.720 50.000 6.51 0.00 40.15 5.03
423 424 4.033990 TGATTACAAGCACTAGAGCGAG 57.966 45.455 6.51 6.00 40.15 5.03
424 425 4.611943 GATGATTACAAGCACTAGAGCGA 58.388 43.478 6.51 0.00 40.15 4.93
425 426 3.423536 CGATGATTACAAGCACTAGAGCG 59.576 47.826 6.51 0.00 40.15 5.03
426 427 4.363999 ACGATGATTACAAGCACTAGAGC 58.636 43.478 3.68 3.68 0.00 4.09
427 428 7.987268 TTAACGATGATTACAAGCACTAGAG 57.013 36.000 0.00 0.00 0.00 2.43
428 429 8.033038 ACTTTAACGATGATTACAAGCACTAGA 58.967 33.333 0.00 0.00 0.00 2.43
429 430 8.110612 CACTTTAACGATGATTACAAGCACTAG 58.889 37.037 0.00 0.00 0.00 2.57
430 431 7.064134 CCACTTTAACGATGATTACAAGCACTA 59.936 37.037 0.00 0.00 0.00 2.74
431 432 6.128282 CCACTTTAACGATGATTACAAGCACT 60.128 38.462 0.00 0.00 0.00 4.40
432 433 6.021596 CCACTTTAACGATGATTACAAGCAC 58.978 40.000 0.00 0.00 0.00 4.40
433 434 5.703592 ACCACTTTAACGATGATTACAAGCA 59.296 36.000 0.00 0.00 0.00 3.91
434 435 6.092259 AGACCACTTTAACGATGATTACAAGC 59.908 38.462 0.00 0.00 0.00 4.01
435 436 7.456253 CAGACCACTTTAACGATGATTACAAG 58.544 38.462 0.00 0.00 0.00 3.16
436 437 6.128391 GCAGACCACTTTAACGATGATTACAA 60.128 38.462 0.00 0.00 0.00 2.41
437 438 5.350365 GCAGACCACTTTAACGATGATTACA 59.650 40.000 0.00 0.00 0.00 2.41
438 439 5.500290 CGCAGACCACTTTAACGATGATTAC 60.500 44.000 0.00 0.00 0.00 1.89
439 440 4.565166 CGCAGACCACTTTAACGATGATTA 59.435 41.667 0.00 0.00 0.00 1.75
440 441 3.370978 CGCAGACCACTTTAACGATGATT 59.629 43.478 0.00 0.00 0.00 2.57
441 442 2.930040 CGCAGACCACTTTAACGATGAT 59.070 45.455 0.00 0.00 0.00 2.45
442 443 2.333926 CGCAGACCACTTTAACGATGA 58.666 47.619 0.00 0.00 0.00 2.92
443 444 1.393539 CCGCAGACCACTTTAACGATG 59.606 52.381 0.00 0.00 0.00 3.84
444 445 1.274167 TCCGCAGACCACTTTAACGAT 59.726 47.619 0.00 0.00 0.00 3.73
445 446 0.675083 TCCGCAGACCACTTTAACGA 59.325 50.000 0.00 0.00 0.00 3.85
446 447 1.722011 ATCCGCAGACCACTTTAACG 58.278 50.000 0.00 0.00 0.00 3.18
447 448 4.189231 ACATATCCGCAGACCACTTTAAC 58.811 43.478 0.00 0.00 0.00 2.01
448 449 4.481368 ACATATCCGCAGACCACTTTAA 57.519 40.909 0.00 0.00 0.00 1.52
449 450 5.069914 ACATACATATCCGCAGACCACTTTA 59.930 40.000 0.00 0.00 0.00 1.85
450 451 4.141711 ACATACATATCCGCAGACCACTTT 60.142 41.667 0.00 0.00 0.00 2.66
451 452 3.388024 ACATACATATCCGCAGACCACTT 59.612 43.478 0.00 0.00 0.00 3.16
452 453 2.965831 ACATACATATCCGCAGACCACT 59.034 45.455 0.00 0.00 0.00 4.00
453 454 3.386768 ACATACATATCCGCAGACCAC 57.613 47.619 0.00 0.00 0.00 4.16
454 455 5.738619 ATTACATACATATCCGCAGACCA 57.261 39.130 0.00 0.00 0.00 4.02
455 456 7.435068 AAAATTACATACATATCCGCAGACC 57.565 36.000 0.00 0.00 0.00 3.85
456 457 8.342634 ACAAAAATTACATACATATCCGCAGAC 58.657 33.333 0.00 0.00 0.00 3.51
457 458 8.445275 ACAAAAATTACATACATATCCGCAGA 57.555 30.769 0.00 0.00 0.00 4.26
497 498 9.179909 GTATATATGAGTGCCTCAGTATGTACT 57.820 37.037 10.13 0.00 44.08 2.73
498 499 8.123575 CGTATATATGAGTGCCTCAGTATGTAC 58.876 40.741 10.13 14.69 44.08 2.90
499 500 7.201705 GCGTATATATGAGTGCCTCAGTATGTA 60.202 40.741 6.12 8.09 44.08 2.29
500 501 6.404844 GCGTATATATGAGTGCCTCAGTATGT 60.405 42.308 6.12 8.74 44.08 2.29
501 502 5.974158 GCGTATATATGAGTGCCTCAGTATG 59.026 44.000 6.12 7.36 44.08 2.39
502 503 5.652452 TGCGTATATATGAGTGCCTCAGTAT 59.348 40.000 6.12 11.74 44.08 2.12
503 504 5.007682 TGCGTATATATGAGTGCCTCAGTA 58.992 41.667 6.12 6.74 44.08 2.74
504 505 3.826729 TGCGTATATATGAGTGCCTCAGT 59.173 43.478 6.12 5.13 44.08 3.41
505 506 4.169508 GTGCGTATATATGAGTGCCTCAG 58.830 47.826 6.12 0.00 44.08 3.35
506 507 3.365969 CGTGCGTATATATGAGTGCCTCA 60.366 47.826 6.12 7.26 44.99 3.86
507 508 3.172050 CGTGCGTATATATGAGTGCCTC 58.828 50.000 6.12 0.00 0.00 4.70
508 509 2.557056 ACGTGCGTATATATGAGTGCCT 59.443 45.455 6.12 0.00 0.00 4.75
509 510 2.942710 ACGTGCGTATATATGAGTGCC 58.057 47.619 6.12 0.00 0.00 5.01
510 511 4.320164 GTGTACGTGCGTATATATGAGTGC 59.680 45.833 7.72 6.50 32.82 4.40
511 512 4.849926 GGTGTACGTGCGTATATATGAGTG 59.150 45.833 7.72 0.00 32.82 3.51
512 513 4.758674 AGGTGTACGTGCGTATATATGAGT 59.241 41.667 7.72 5.09 32.82 3.41
513 514 5.292671 AGGTGTACGTGCGTATATATGAG 57.707 43.478 7.72 0.00 32.82 2.90
514 515 5.694231 AAGGTGTACGTGCGTATATATGA 57.306 39.130 7.72 0.00 32.82 2.15
515 516 8.456904 AAATAAGGTGTACGTGCGTATATATG 57.543 34.615 7.72 0.00 32.82 1.78
516 517 9.480053 AAAAATAAGGTGTACGTGCGTATATAT 57.520 29.630 7.72 0.00 32.82 0.86
517 518 8.870160 AAAAATAAGGTGTACGTGCGTATATA 57.130 30.769 7.72 0.00 32.82 0.86
518 519 7.775397 AAAAATAAGGTGTACGTGCGTATAT 57.225 32.000 7.72 0.00 32.82 0.86
519 520 8.754096 CATAAAAATAAGGTGTACGTGCGTATA 58.246 33.333 7.72 2.45 32.82 1.47
520 521 7.492020 TCATAAAAATAAGGTGTACGTGCGTAT 59.508 33.333 7.72 0.00 32.82 3.06
521 522 6.810676 TCATAAAAATAAGGTGTACGTGCGTA 59.189 34.615 0.00 0.00 0.00 4.42
522 523 5.638657 TCATAAAAATAAGGTGTACGTGCGT 59.361 36.000 0.00 2.05 0.00 5.24
523 524 6.097156 TCATAAAAATAAGGTGTACGTGCG 57.903 37.500 0.00 0.00 0.00 5.34
524 525 5.963586 GCTCATAAAAATAAGGTGTACGTGC 59.036 40.000 0.00 0.00 0.00 5.34
525 526 7.067532 TGCTCATAAAAATAAGGTGTACGTG 57.932 36.000 0.00 0.00 0.00 4.49
526 527 7.769044 AGATGCTCATAAAAATAAGGTGTACGT 59.231 33.333 0.00 0.00 0.00 3.57
527 528 8.142994 AGATGCTCATAAAAATAAGGTGTACG 57.857 34.615 0.00 0.00 0.00 3.67
530 531 9.643693 CAAAAGATGCTCATAAAAATAAGGTGT 57.356 29.630 0.00 0.00 0.00 4.16
531 532 9.643693 ACAAAAGATGCTCATAAAAATAAGGTG 57.356 29.630 0.00 0.00 0.00 4.00
532 533 9.643693 CACAAAAGATGCTCATAAAAATAAGGT 57.356 29.630 0.00 0.00 0.00 3.50
533 534 9.643693 ACACAAAAGATGCTCATAAAAATAAGG 57.356 29.630 0.00 0.00 0.00 2.69
537 538 9.768662 AAGAACACAAAAGATGCTCATAAAAAT 57.231 25.926 0.00 0.00 0.00 1.82
538 539 9.598517 AAAGAACACAAAAGATGCTCATAAAAA 57.401 25.926 0.00 0.00 0.00 1.94
539 540 9.033481 CAAAGAACACAAAAGATGCTCATAAAA 57.967 29.630 0.00 0.00 0.00 1.52
540 541 7.169645 GCAAAGAACACAAAAGATGCTCATAAA 59.830 33.333 0.00 0.00 0.00 1.40
541 542 6.642131 GCAAAGAACACAAAAGATGCTCATAA 59.358 34.615 0.00 0.00 0.00 1.90
542 543 6.151691 GCAAAGAACACAAAAGATGCTCATA 58.848 36.000 0.00 0.00 0.00 2.15
543 544 4.986659 GCAAAGAACACAAAAGATGCTCAT 59.013 37.500 0.00 0.00 0.00 2.90
544 545 4.142204 TGCAAAGAACACAAAAGATGCTCA 60.142 37.500 0.00 0.00 33.87 4.26
545 546 4.207841 GTGCAAAGAACACAAAAGATGCTC 59.792 41.667 0.00 0.00 37.96 4.26
546 547 4.114794 GTGCAAAGAACACAAAAGATGCT 58.885 39.130 0.00 0.00 37.96 3.79
547 548 4.026310 CAGTGCAAAGAACACAAAAGATGC 60.026 41.667 0.00 0.00 40.59 3.91
548 549 5.104374 ACAGTGCAAAGAACACAAAAGATG 58.896 37.500 0.00 0.00 40.59 2.90
549 550 5.105797 TGACAGTGCAAAGAACACAAAAGAT 60.106 36.000 0.00 0.00 40.59 2.40
550 551 4.217334 TGACAGTGCAAAGAACACAAAAGA 59.783 37.500 0.00 0.00 40.59 2.52
551 552 4.484236 TGACAGTGCAAAGAACACAAAAG 58.516 39.130 0.00 0.00 40.59 2.27
552 553 4.511617 TGACAGTGCAAAGAACACAAAA 57.488 36.364 0.00 0.00 40.59 2.44
553 554 4.717233 ATGACAGTGCAAAGAACACAAA 57.283 36.364 0.00 0.00 40.59 2.83
554 555 5.826601 TTATGACAGTGCAAAGAACACAA 57.173 34.783 0.00 0.00 40.59 3.33
555 556 5.299028 ACATTATGACAGTGCAAAGAACACA 59.701 36.000 0.00 0.00 40.59 3.72
556 557 5.762045 ACATTATGACAGTGCAAAGAACAC 58.238 37.500 0.00 0.00 38.35 3.32
557 558 7.390162 TCATACATTATGACAGTGCAAAGAACA 59.610 33.333 0.00 0.00 40.09 3.18
558 559 7.751732 TCATACATTATGACAGTGCAAAGAAC 58.248 34.615 0.00 0.00 40.09 3.01
559 560 7.920160 TCATACATTATGACAGTGCAAAGAA 57.080 32.000 0.00 0.00 40.09 2.52
560 561 7.012610 CCATCATACATTATGACAGTGCAAAGA 59.987 37.037 0.00 0.00 46.94 2.52
561 562 7.012610 TCCATCATACATTATGACAGTGCAAAG 59.987 37.037 0.00 0.00 46.94 2.77
562 563 6.827762 TCCATCATACATTATGACAGTGCAAA 59.172 34.615 0.00 0.00 46.94 3.68
563 564 6.355747 TCCATCATACATTATGACAGTGCAA 58.644 36.000 0.00 0.00 46.94 4.08
564 565 5.927819 TCCATCATACATTATGACAGTGCA 58.072 37.500 0.00 0.00 46.94 4.57
565 566 8.037166 TCTATCCATCATACATTATGACAGTGC 58.963 37.037 0.00 0.00 46.94 4.40
602 603 8.787818 ACTTTCCATCTATATACCCCTCAAAAA 58.212 33.333 0.00 0.00 0.00 1.94
603 604 8.344939 ACTTTCCATCTATATACCCCTCAAAA 57.655 34.615 0.00 0.00 0.00 2.44
604 605 7.947782 ACTTTCCATCTATATACCCCTCAAA 57.052 36.000 0.00 0.00 0.00 2.69
605 606 7.947782 AACTTTCCATCTATATACCCCTCAA 57.052 36.000 0.00 0.00 0.00 3.02
606 607 7.947782 AAACTTTCCATCTATATACCCCTCA 57.052 36.000 0.00 0.00 0.00 3.86
645 646 5.972107 ATGATTCTTGTTTGCTTAGCAGT 57.028 34.783 7.08 0.00 40.61 4.40
646 647 6.744537 GTGTATGATTCTTGTTTGCTTAGCAG 59.255 38.462 7.08 0.00 40.61 4.24
650 651 7.877612 TCTCAGTGTATGATTCTTGTTTGCTTA 59.122 33.333 0.00 0.00 37.28 3.09
666 667 2.231215 GCTTCGGCATCTCAGTGTAT 57.769 50.000 0.00 0.00 41.33 2.29
667 668 3.741029 GCTTCGGCATCTCAGTGTA 57.259 52.632 0.00 0.00 41.33 2.90
668 669 4.606071 GCTTCGGCATCTCAGTGT 57.394 55.556 0.00 0.00 41.33 3.55
718 719 1.010580 ATGTTTTGTGTGTGACGCGA 58.989 45.000 15.93 0.00 0.00 5.87
755 756 8.796475 ACTCATAATGTAACTGCATCTGTTTTT 58.204 29.630 0.00 0.00 0.00 1.94
954 955 4.822685 TGCAAGTATGGGCATGAAAAAT 57.177 36.364 0.00 0.00 34.58 1.82
969 970 2.542618 CGATCTACGAGAGCATGCAAGT 60.543 50.000 21.98 15.43 45.77 3.16
1196 1197 1.450312 GACTTGTGCCATCTCCGGG 60.450 63.158 0.00 0.00 0.00 5.73
1485 1486 4.492160 GCGATGCCGGTGTCGAGA 62.492 66.667 27.17 0.00 40.11 4.04
2160 2161 0.030504 TGTTGACGCCGTCGAAGTAA 59.969 50.000 9.11 0.00 39.41 2.24
2460 2461 2.956964 GAGAAGGCCGCGACGATG 60.957 66.667 8.23 0.00 0.00 3.84
2916 2917 1.369689 GCACGTCAAGCTGCTGTTG 60.370 57.895 1.35 0.00 0.00 3.33
2952 2953 3.630013 TTCAGCTGCGCCTCTGGT 61.630 61.111 20.96 6.03 0.00 4.00
2955 2956 1.216710 GTAGTTCAGCTGCGCCTCT 59.783 57.895 9.47 0.00 0.00 3.69
3079 3080 1.303643 CCTTCACCTTGAGCCACCC 60.304 63.158 0.00 0.00 0.00 4.61
3080 3081 0.890996 CACCTTCACCTTGAGCCACC 60.891 60.000 0.00 0.00 0.00 4.61
3349 3439 4.752101 GGGAAGAACGATAATGTCTCCATG 59.248 45.833 0.00 0.00 0.00 3.66
3439 3529 3.515901 ACAAGGTTATCTCAGTGACCTCC 59.484 47.826 1.19 0.00 41.49 4.30
3537 3627 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
3538 3628 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
3539 3629 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3540 3630 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
3541 3631 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
3542 3632 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
3543 3633 4.755123 ACTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
3544 3634 6.635030 AACTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
3545 3635 6.605594 ACAAACTTGAGTCACTTATTTTGGGA 59.394 34.615 9.57 0.00 0.00 4.37
3546 3636 6.805713 ACAAACTTGAGTCACTTATTTTGGG 58.194 36.000 9.57 0.00 0.00 4.12
3547 3637 8.621286 AGTACAAACTTGAGTCACTTATTTTGG 58.379 33.333 9.57 0.00 29.00 3.28
3553 3643 9.880157 AAAGTTAGTACAAACTTGAGTCACTTA 57.120 29.630 2.97 0.00 46.40 2.24
3554 3644 8.665685 CAAAGTTAGTACAAACTTGAGTCACTT 58.334 33.333 2.97 0.00 46.40 3.16
3555 3645 7.822822 ACAAAGTTAGTACAAACTTGAGTCACT 59.177 33.333 2.97 0.00 46.40 3.41
3556 3646 7.971455 ACAAAGTTAGTACAAACTTGAGTCAC 58.029 34.615 2.97 0.00 46.40 3.67
3557 3647 9.090692 GTACAAAGTTAGTACAAACTTGAGTCA 57.909 33.333 2.97 0.00 46.40 3.41
3558 3648 9.310716 AGTACAAAGTTAGTACAAACTTGAGTC 57.689 33.333 2.97 0.00 46.40 3.36
3582 3672 9.310716 GTGACTCAACTTTGTACTAGTTTTAGT 57.689 33.333 0.00 17.00 42.66 2.24
3583 3673 9.530633 AGTGACTCAACTTTGTACTAGTTTTAG 57.469 33.333 0.00 11.99 33.73 1.85
3584 3674 9.880157 AAGTGACTCAACTTTGTACTAGTTTTA 57.120 29.630 0.00 3.52 37.05 1.52
3585 3675 8.788325 AAGTGACTCAACTTTGTACTAGTTTT 57.212 30.769 0.00 1.05 37.05 2.43
3595 3685 9.370126 CGTTCTAAAATAAGTGACTCAACTTTG 57.630 33.333 0.00 0.00 40.77 2.77
3596 3686 8.557029 CCGTTCTAAAATAAGTGACTCAACTTT 58.443 33.333 0.00 0.00 40.77 2.66
3597 3687 7.929785 TCCGTTCTAAAATAAGTGACTCAACTT 59.070 33.333 0.00 0.00 42.89 2.66
3598 3688 7.439381 TCCGTTCTAAAATAAGTGACTCAACT 58.561 34.615 0.00 0.00 0.00 3.16
3599 3689 7.148623 CCTCCGTTCTAAAATAAGTGACTCAAC 60.149 40.741 0.00 0.00 0.00 3.18
3600 3690 6.872020 CCTCCGTTCTAAAATAAGTGACTCAA 59.128 38.462 0.00 0.00 0.00 3.02
3601 3691 6.395629 CCTCCGTTCTAAAATAAGTGACTCA 58.604 40.000 0.00 0.00 0.00 3.41
3602 3692 5.811100 CCCTCCGTTCTAAAATAAGTGACTC 59.189 44.000 0.00 0.00 0.00 3.36
3603 3693 5.482878 TCCCTCCGTTCTAAAATAAGTGACT 59.517 40.000 0.00 0.00 0.00 3.41
3604 3694 5.727434 TCCCTCCGTTCTAAAATAAGTGAC 58.273 41.667 0.00 0.00 0.00 3.67
3605 3695 5.482878 ACTCCCTCCGTTCTAAAATAAGTGA 59.517 40.000 0.00 0.00 0.00 3.41
3606 3696 5.731591 ACTCCCTCCGTTCTAAAATAAGTG 58.268 41.667 0.00 0.00 0.00 3.16
3607 3697 6.438425 TGTACTCCCTCCGTTCTAAAATAAGT 59.562 38.462 0.00 0.00 0.00 2.24
3608 3698 6.870769 TGTACTCCCTCCGTTCTAAAATAAG 58.129 40.000 0.00 0.00 0.00 1.73
3609 3699 6.855763 TGTACTCCCTCCGTTCTAAAATAA 57.144 37.500 0.00 0.00 0.00 1.40
3610 3700 7.270047 CAATGTACTCCCTCCGTTCTAAAATA 58.730 38.462 0.00 0.00 0.00 1.40
3611 3701 5.952347 ATGTACTCCCTCCGTTCTAAAAT 57.048 39.130 0.00 0.00 0.00 1.82
3612 3702 5.484715 CAATGTACTCCCTCCGTTCTAAAA 58.515 41.667 0.00 0.00 0.00 1.52
3613 3703 4.622220 GCAATGTACTCCCTCCGTTCTAAA 60.622 45.833 0.00 0.00 0.00 1.85
3614 3704 3.118884 GCAATGTACTCCCTCCGTTCTAA 60.119 47.826 0.00 0.00 0.00 2.10
3615 3705 2.429610 GCAATGTACTCCCTCCGTTCTA 59.570 50.000 0.00 0.00 0.00 2.10
3616 3706 1.207329 GCAATGTACTCCCTCCGTTCT 59.793 52.381 0.00 0.00 0.00 3.01
3617 3707 1.066430 TGCAATGTACTCCCTCCGTTC 60.066 52.381 0.00 0.00 0.00 3.95
3618 3708 0.981183 TGCAATGTACTCCCTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
3619 3709 0.981183 TTGCAATGTACTCCCTCCGT 59.019 50.000 0.00 0.00 0.00 4.69
3620 3710 1.737793 GTTTGCAATGTACTCCCTCCG 59.262 52.381 0.00 0.00 0.00 4.63
3621 3711 2.749621 CAGTTTGCAATGTACTCCCTCC 59.250 50.000 0.00 0.00 0.00 4.30
3622 3712 3.674997 TCAGTTTGCAATGTACTCCCTC 58.325 45.455 0.00 0.00 0.00 4.30
3623 3713 3.327757 TCTCAGTTTGCAATGTACTCCCT 59.672 43.478 0.00 0.00 0.00 4.20
3624 3714 3.674997 TCTCAGTTTGCAATGTACTCCC 58.325 45.455 0.00 0.00 0.00 4.30
3625 3715 3.126000 GCTCTCAGTTTGCAATGTACTCC 59.874 47.826 0.00 0.00 0.00 3.85
3626 3716 3.748048 TGCTCTCAGTTTGCAATGTACTC 59.252 43.478 0.00 0.00 33.48 2.59
3627 3717 3.499918 GTGCTCTCAGTTTGCAATGTACT 59.500 43.478 0.00 0.00 38.50 2.73
3628 3718 3.365364 GGTGCTCTCAGTTTGCAATGTAC 60.365 47.826 0.00 0.00 38.50 2.90
3629 3719 2.813754 GGTGCTCTCAGTTTGCAATGTA 59.186 45.455 0.00 0.00 38.50 2.29
3630 3720 1.610522 GGTGCTCTCAGTTTGCAATGT 59.389 47.619 0.00 0.00 38.50 2.71
3631 3721 1.610038 TGGTGCTCTCAGTTTGCAATG 59.390 47.619 0.00 0.00 38.50 2.82
3758 3848 6.824196 TCTGGTCATTTTGTAACAGTAACACA 59.176 34.615 0.00 0.00 0.00 3.72
3759 3849 7.130269 GTCTGGTCATTTTGTAACAGTAACAC 58.870 38.462 0.00 0.00 0.00 3.32
3783 3875 5.518848 TGTGTTGCTGATTTTCTCATTGT 57.481 34.783 0.00 0.00 32.10 2.71
3827 3919 3.844577 ACGATCTAAACTGCACTACGT 57.155 42.857 0.00 0.00 0.00 3.57
3828 3920 4.031426 GGAAACGATCTAAACTGCACTACG 59.969 45.833 0.00 0.00 0.00 3.51
3864 3956 9.116067 CTGGATTTCCCTTTCGTGTATTTATTA 57.884 33.333 0.00 0.00 35.38 0.98
3900 3992 1.016130 CGACTGCACCAGACATGTCC 61.016 60.000 22.21 7.15 35.18 4.02
4019 4111 7.459234 AGTATATGCCACTTTTACCTTATCCC 58.541 38.462 0.00 0.00 0.00 3.85
4195 4287 9.578439 GCTTGTTTGAGCATCTTATTAGAAAAT 57.422 29.630 0.00 0.00 42.25 1.82
4196 4288 8.028938 GGCTTGTTTGAGCATCTTATTAGAAAA 58.971 33.333 0.00 0.00 44.49 2.29
4197 4289 7.176515 TGGCTTGTTTGAGCATCTTATTAGAAA 59.823 33.333 0.00 0.00 44.49 2.52
4198 4290 6.658816 TGGCTTGTTTGAGCATCTTATTAGAA 59.341 34.615 0.00 0.00 44.49 2.10
4199 4291 6.179756 TGGCTTGTTTGAGCATCTTATTAGA 58.820 36.000 0.00 0.00 44.49 2.10
4200 4292 6.441093 TGGCTTGTTTGAGCATCTTATTAG 57.559 37.500 0.00 0.00 44.49 1.73
4201 4293 6.832520 TTGGCTTGTTTGAGCATCTTATTA 57.167 33.333 0.00 0.00 44.49 0.98
4202 4294 5.726980 TTGGCTTGTTTGAGCATCTTATT 57.273 34.783 0.00 0.00 44.49 1.40
4203 4295 5.419788 TGATTGGCTTGTTTGAGCATCTTAT 59.580 36.000 0.00 0.00 44.49 1.73
4204 4296 4.766373 TGATTGGCTTGTTTGAGCATCTTA 59.234 37.500 0.00 0.00 44.49 2.10
4205 4297 3.575256 TGATTGGCTTGTTTGAGCATCTT 59.425 39.130 0.00 0.00 44.49 2.40
4206 4298 3.159472 TGATTGGCTTGTTTGAGCATCT 58.841 40.909 0.00 0.00 44.49 2.90
4207 4299 3.508762 CTGATTGGCTTGTTTGAGCATC 58.491 45.455 0.00 0.00 44.49 3.91
4208 4300 2.353406 GCTGATTGGCTTGTTTGAGCAT 60.353 45.455 0.00 0.00 44.49 3.79
4209 4301 1.000060 GCTGATTGGCTTGTTTGAGCA 60.000 47.619 0.00 0.00 44.49 4.26
4210 4302 1.271656 AGCTGATTGGCTTGTTTGAGC 59.728 47.619 0.00 0.00 39.86 4.26
4224 4316 6.363167 TTTCCATTTCCAATCAAAGCTGAT 57.637 33.333 0.00 0.00 44.54 2.90
4225 4317 5.804944 TTTCCATTTCCAATCAAAGCTGA 57.195 34.783 0.00 0.00 35.56 4.26
4226 4318 5.106830 GCTTTTCCATTTCCAATCAAAGCTG 60.107 40.000 6.50 0.00 40.84 4.24
4227 4319 4.999311 GCTTTTCCATTTCCAATCAAAGCT 59.001 37.500 6.50 0.00 40.84 3.74
4228 4320 4.154737 GGCTTTTCCATTTCCAATCAAAGC 59.845 41.667 5.37 5.37 42.47 3.51
4229 4321 5.307204 TGGCTTTTCCATTTCCAATCAAAG 58.693 37.500 0.00 0.00 40.72 2.77
4230 4322 5.301835 TGGCTTTTCCATTTCCAATCAAA 57.698 34.783 0.00 0.00 40.72 2.69
4231 4323 4.970860 TGGCTTTTCCATTTCCAATCAA 57.029 36.364 0.00 0.00 40.72 2.57
4242 4334 5.475564 GGTTCTTAATACTGTGGCTTTTCCA 59.524 40.000 0.00 0.00 44.18 3.53
4243 4335 5.710567 AGGTTCTTAATACTGTGGCTTTTCC 59.289 40.000 0.00 0.00 0.00 3.13
4244 4336 6.819397 AGGTTCTTAATACTGTGGCTTTTC 57.181 37.500 0.00 0.00 0.00 2.29
4245 4337 7.390718 CAGTAGGTTCTTAATACTGTGGCTTTT 59.609 37.037 5.40 0.00 40.86 2.27
4246 4338 6.879458 CAGTAGGTTCTTAATACTGTGGCTTT 59.121 38.462 5.40 0.00 40.86 3.51
4247 4339 6.407202 CAGTAGGTTCTTAATACTGTGGCTT 58.593 40.000 5.40 0.00 40.86 4.35
4248 4340 5.978814 CAGTAGGTTCTTAATACTGTGGCT 58.021 41.667 5.40 0.00 40.86 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.