Multiple sequence alignment - TraesCS1A01G236100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G236100 chr1A 100.000 8699 0 0 1 8699 418058131 418049433 0.000000e+00 16065.0
1 TraesCS1A01G236100 chr1D 94.366 6212 187 52 2321 8463 325668063 325674180 0.000000e+00 9382.0
2 TraesCS1A01G236100 chr1D 90.556 720 37 19 951 1658 325666608 325667308 0.000000e+00 924.0
3 TraesCS1A01G236100 chr1D 92.905 592 28 5 1659 2238 325667475 325668064 0.000000e+00 848.0
4 TraesCS1A01G236100 chr1D 88.785 214 21 2 8486 8699 325674274 325674484 8.660000e-65 259.0
5 TraesCS1A01G236100 chr1B 93.317 5866 220 50 2326 8155 438177714 438183443 0.000000e+00 8503.0
6 TraesCS1A01G236100 chr1B 89.684 1299 58 30 410 1658 438175633 438176905 0.000000e+00 1587.0
7 TraesCS1A01G236100 chr1B 94.533 567 24 5 1658 2221 438177142 438177704 0.000000e+00 869.0
8 TraesCS1A01G236100 chr1B 88.083 193 21 2 132 324 438175440 438175630 2.440000e-55 228.0
9 TraesCS1A01G236100 chr1B 95.876 97 4 0 2230 2326 61251344 61251248 3.250000e-34 158.0
10 TraesCS1A01G236100 chr1B 96.809 94 2 1 2233 2326 272976699 272976791 1.170000e-33 156.0
11 TraesCS1A01G236100 chr1B 94.000 100 6 0 2237 2336 66377400 66377499 1.510000e-32 152.0
12 TraesCS1A01G236100 chr6A 89.290 2745 206 46 4346 7044 30725535 30722833 0.000000e+00 3360.0
13 TraesCS1A01G236100 chr6A 84.660 867 89 23 7308 8152 30722833 30721989 0.000000e+00 824.0
14 TraesCS1A01G236100 chr6A 86.037 752 59 24 3007 3751 30726241 30725529 0.000000e+00 765.0
15 TraesCS1A01G236100 chr6A 88.544 419 38 6 2495 2912 30726660 30726251 4.690000e-137 499.0
16 TraesCS1A01G236100 chr6A 99.281 139 1 0 1 139 541540602 541540464 1.450000e-62 252.0
17 TraesCS1A01G236100 chr6A 97.826 92 1 1 323 414 53908438 53908348 3.250000e-34 158.0
18 TraesCS1A01G236100 chr6B 88.962 2745 211 44 4346 7044 51026837 51029535 0.000000e+00 3306.0
19 TraesCS1A01G236100 chr6B 87.212 1259 107 29 2495 3745 51025625 51026837 0.000000e+00 1384.0
20 TraesCS1A01G236100 chr6B 86.560 878 72 25 7308 8157 51029535 51030394 0.000000e+00 926.0
21 TraesCS1A01G236100 chr6B 95.918 98 3 1 314 410 232169048 232168951 3.250000e-34 158.0
22 TraesCS1A01G236100 chr6B 89.796 49 4 1 626 673 51022951 51022999 2.620000e-05 62.1
23 TraesCS1A01G236100 chr6D 91.506 1872 133 13 4346 6212 27496323 27498173 0.000000e+00 2553.0
24 TraesCS1A01G236100 chr6D 86.736 1259 108 31 2495 3745 27495116 27496323 0.000000e+00 1345.0
25 TraesCS1A01G236100 chr6D 85.471 881 68 29 7308 8157 27499019 27499870 0.000000e+00 863.0
26 TraesCS1A01G236100 chr6D 88.062 645 52 11 6412 7044 27498388 27499019 0.000000e+00 741.0
27 TraesCS1A01G236100 chr6D 92.661 109 5 3 2215 2322 400294374 400294268 4.210000e-33 154.0
28 TraesCS1A01G236100 chr7A 81.351 681 118 6 4437 5116 604815539 604816211 5.940000e-151 545.0
29 TraesCS1A01G236100 chr7A 77.637 711 89 42 3769 4453 604814762 604815428 1.380000e-97 368.0
30 TraesCS1A01G236100 chr7A 83.951 324 48 4 3411 3733 604814440 604814760 3.050000e-79 307.0
31 TraesCS1A01G236100 chr7A 84.810 237 20 5 3246 3476 127657654 127657428 3.160000e-54 224.0
32 TraesCS1A01G236100 chr7B 81.381 333 44 12 3411 3733 561066183 561066507 1.120000e-63 255.0
33 TraesCS1A01G236100 chr7B 96.907 97 3 0 319 415 292378759 292378855 6.990000e-36 163.0
34 TraesCS1A01G236100 chr7D 86.920 237 15 10 3246 3476 611354744 611354970 1.450000e-62 252.0
35 TraesCS1A01G236100 chr7D 92.308 104 6 1 327 430 503323176 503323075 7.040000e-31 147.0
36 TraesCS1A01G236100 chr4A 98.561 139 2 0 1 139 89566173 89566035 6.740000e-61 246.0
37 TraesCS1A01G236100 chr4A 99.265 136 1 0 1 136 445714897 445715032 6.740000e-61 246.0
38 TraesCS1A01G236100 chr4A 95.833 96 4 0 2230 2325 207366983 207366888 1.170000e-33 156.0
39 TraesCS1A01G236100 chr4B 83.333 234 28 10 3246 3476 355505999 355505774 1.140000e-48 206.0
40 TraesCS1A01G236100 chr4B 81.513 238 27 11 3151 3385 141289765 141289988 6.940000e-41 180.0
41 TraesCS1A01G236100 chr4B 94.949 99 4 1 327 425 86084367 86084464 4.210000e-33 154.0
42 TraesCS1A01G236100 chr4D 98.889 90 1 0 2236 2325 9296466 9296555 2.510000e-35 161.0
43 TraesCS1A01G236100 chr4D 93.023 43 1 2 104 146 91260536 91260496 2.620000e-05 62.1
44 TraesCS1A01G236100 chr3B 97.826 92 2 0 2236 2327 790199750 790199841 9.040000e-35 159.0
45 TraesCS1A01G236100 chr3B 92.661 109 6 2 2228 2335 4796041 4796148 1.170000e-33 156.0
46 TraesCS1A01G236100 chr2B 96.774 93 3 0 327 419 197683326 197683234 1.170000e-33 156.0
47 TraesCS1A01G236100 chr2B 90.826 109 8 2 315 423 470530834 470530728 2.530000e-30 145.0
48 TraesCS1A01G236100 chr3A 98.837 86 1 0 327 412 492755878 492755963 4.210000e-33 154.0
49 TraesCS1A01G236100 chr2A 94.898 98 4 1 2227 2324 98882722 98882818 1.510000e-32 152.0
50 TraesCS1A01G236100 chr2A 92.308 104 8 0 316 419 20825035 20824932 1.960000e-31 148.0
51 TraesCS1A01G236100 chr2A 100.000 37 0 0 103 139 147170170 147170134 1.570000e-07 69.4
52 TraesCS1A01G236100 chr2A 97.436 39 0 1 101 139 653299385 653299422 2.030000e-06 65.8
53 TraesCS1A01G236100 chr5B 95.122 41 2 0 99 139 693066614 693066654 2.030000e-06 65.8
54 TraesCS1A01G236100 chr2D 91.667 48 2 2 101 148 602181214 602181169 2.030000e-06 65.8
55 TraesCS1A01G236100 chr5A 92.857 42 1 2 99 138 660208659 660208700 9.430000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G236100 chr1A 418049433 418058131 8698 True 16065.000000 16065 100.000000 1 8699 1 chr1A.!!$R1 8698
1 TraesCS1A01G236100 chr1D 325666608 325674484 7876 False 2853.250000 9382 91.653000 951 8699 4 chr1D.!!$F1 7748
2 TraesCS1A01G236100 chr1B 438175440 438183443 8003 False 2796.750000 8503 91.404250 132 8155 4 chr1B.!!$F3 8023
3 TraesCS1A01G236100 chr6A 30721989 30726660 4671 True 1362.000000 3360 87.132750 2495 8152 4 chr6A.!!$R3 5657
4 TraesCS1A01G236100 chr6B 51022951 51030394 7443 False 1419.525000 3306 88.132500 626 8157 4 chr6B.!!$F1 7531
5 TraesCS1A01G236100 chr6D 27495116 27499870 4754 False 1375.500000 2553 87.943750 2495 8157 4 chr6D.!!$F1 5662
6 TraesCS1A01G236100 chr7A 604814440 604816211 1771 False 406.666667 545 80.979667 3411 5116 3 chr7A.!!$F1 1705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
289 290 0.040157 CGCGATGGGCCATTTGTATG 60.040 55.000 22.20 7.84 38.94 2.39 F
337 338 0.251653 TTGACTGCTACTCCCTCCGT 60.252 55.000 0.00 0.00 0.00 4.69 F
338 339 0.622136 TGACTGCTACTCCCTCCGTA 59.378 55.000 0.00 0.00 0.00 4.02 F
1643 2382 0.249657 GCGGGTTTTGTGAAATGCCA 60.250 50.000 0.00 0.00 0.00 4.92 F
3130 4287 0.481128 AAACCACCATCCCGGAAAGT 59.519 50.000 0.73 0.00 38.63 2.66 F
3950 5116 1.988107 AGTCATGCAGGAGAAAAGGGA 59.012 47.619 0.00 0.00 0.00 4.20 F
4804 6130 0.798776 GCACAGTGACAGTACATGCC 59.201 55.000 4.15 0.00 32.14 4.40 F
4859 6185 1.251251 GCAATTCCACTGCCTGAACT 58.749 50.000 0.00 0.00 33.51 3.01 F
5530 6879 2.682856 TGTGTTCAGTTGAAAGGACAGC 59.317 45.455 0.00 0.00 35.58 4.40 F
6167 7530 3.194861 GGGCTTTGTTTGTTTCCTTGTC 58.805 45.455 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1971 0.394352 GCACCCGAAATCCACCTCAT 60.394 55.000 0.00 0.00 0.00 2.90 R
1424 2017 0.997932 CTGTGACAGAGAAGCGCATC 59.002 55.000 11.47 7.57 32.44 3.91 R
1930 3009 1.423921 ACCACCCACTCCAACCTAAAG 59.576 52.381 0.00 0.00 0.00 1.85 R
3242 4401 2.749621 CTGGTGCAAGGGAAACATACTC 59.250 50.000 0.00 0.00 0.00 2.59 R
4189 5356 1.210722 TGTTACATTATGCAGGGGCGA 59.789 47.619 0.00 0.00 45.35 5.54 R
5248 6579 2.159254 CCCAATAAGTTCATGGTTGCCG 60.159 50.000 0.00 0.00 32.13 5.69 R
6409 7787 1.134401 CCGTGCCAATAGGTGACATCT 60.134 52.381 0.00 0.00 37.19 2.90 R
6410 7788 1.299541 CCGTGCCAATAGGTGACATC 58.700 55.000 0.00 0.00 37.19 3.06 R
7416 8859 0.544357 TCATGGGGACGAACTGGACT 60.544 55.000 0.00 0.00 0.00 3.85 R
8070 9580 1.176527 CCAACAGGCGACCATTGATT 58.823 50.000 3.67 0.00 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.506328 GGTTTTCATTTGACAGTACTTACCT 57.494 36.000 0.00 0.00 0.00 3.08
25 26 7.937649 GGTTTTCATTTGACAGTACTTACCTT 58.062 34.615 0.00 0.00 0.00 3.50
26 27 8.410912 GGTTTTCATTTGACAGTACTTACCTTT 58.589 33.333 0.00 0.00 0.00 3.11
27 28 9.447040 GTTTTCATTTGACAGTACTTACCTTTC 57.553 33.333 0.00 0.00 0.00 2.62
28 29 8.740123 TTTCATTTGACAGTACTTACCTTTCA 57.260 30.769 0.00 0.00 0.00 2.69
29 30 8.918202 TTCATTTGACAGTACTTACCTTTCAT 57.082 30.769 0.00 0.00 0.00 2.57
30 31 8.918202 TCATTTGACAGTACTTACCTTTCATT 57.082 30.769 0.00 0.00 0.00 2.57
31 32 9.349713 TCATTTGACAGTACTTACCTTTCATTT 57.650 29.630 0.00 0.00 0.00 2.32
32 33 9.398170 CATTTGACAGTACTTACCTTTCATTTG 57.602 33.333 0.00 0.00 0.00 2.32
33 34 8.740123 TTTGACAGTACTTACCTTTCATTTGA 57.260 30.769 0.00 0.00 0.00 2.69
34 35 7.724305 TGACAGTACTTACCTTTCATTTGAC 57.276 36.000 0.00 0.00 0.00 3.18
35 36 7.276658 TGACAGTACTTACCTTTCATTTGACA 58.723 34.615 0.00 0.00 0.00 3.58
36 37 7.936847 TGACAGTACTTACCTTTCATTTGACAT 59.063 33.333 0.00 0.00 0.00 3.06
37 38 8.099364 ACAGTACTTACCTTTCATTTGACATG 57.901 34.615 0.00 0.00 0.00 3.21
38 39 7.023575 CAGTACTTACCTTTCATTTGACATGC 58.976 38.462 0.00 0.00 0.00 4.06
39 40 5.391312 ACTTACCTTTCATTTGACATGCC 57.609 39.130 0.00 0.00 0.00 4.40
40 41 5.079643 ACTTACCTTTCATTTGACATGCCT 58.920 37.500 0.00 0.00 0.00 4.75
41 42 5.183904 ACTTACCTTTCATTTGACATGCCTC 59.816 40.000 0.00 0.00 0.00 4.70
42 43 3.499338 ACCTTTCATTTGACATGCCTCA 58.501 40.909 0.00 0.00 0.00 3.86
43 44 4.091549 ACCTTTCATTTGACATGCCTCAT 58.908 39.130 0.00 0.00 0.00 2.90
44 45 4.081862 ACCTTTCATTTGACATGCCTCATG 60.082 41.667 5.35 5.35 46.18 3.07
45 46 3.513680 TTCATTTGACATGCCTCATGC 57.486 42.857 6.71 1.60 44.80 4.06
46 47 2.730382 TCATTTGACATGCCTCATGCT 58.270 42.857 6.71 0.00 44.80 3.79
47 48 3.093814 TCATTTGACATGCCTCATGCTT 58.906 40.909 6.71 0.00 44.80 3.91
48 49 3.129813 TCATTTGACATGCCTCATGCTTC 59.870 43.478 6.71 0.00 44.80 3.86
49 50 1.466856 TTGACATGCCTCATGCTTCC 58.533 50.000 6.71 0.00 44.80 3.46
50 51 0.328926 TGACATGCCTCATGCTTCCA 59.671 50.000 6.71 0.00 44.80 3.53
51 52 0.737219 GACATGCCTCATGCTTCCAC 59.263 55.000 6.71 0.00 44.80 4.02
52 53 1.028330 ACATGCCTCATGCTTCCACG 61.028 55.000 6.71 0.00 44.80 4.94
53 54 2.117156 ATGCCTCATGCTTCCACGC 61.117 57.895 0.00 0.00 42.00 5.34
54 55 2.437359 GCCTCATGCTTCCACGCT 60.437 61.111 0.00 0.00 36.87 5.07
55 56 2.042831 GCCTCATGCTTCCACGCTT 61.043 57.895 0.00 0.00 36.87 4.68
56 57 0.744414 GCCTCATGCTTCCACGCTTA 60.744 55.000 0.00 0.00 36.87 3.09
57 58 1.293924 CCTCATGCTTCCACGCTTAG 58.706 55.000 0.00 0.00 0.00 2.18
58 59 1.134699 CCTCATGCTTCCACGCTTAGA 60.135 52.381 0.00 0.00 0.00 2.10
59 60 2.621338 CTCATGCTTCCACGCTTAGAA 58.379 47.619 0.00 0.00 0.00 2.10
60 61 3.002791 CTCATGCTTCCACGCTTAGAAA 58.997 45.455 0.00 0.00 0.00 2.52
61 62 3.407698 TCATGCTTCCACGCTTAGAAAA 58.592 40.909 0.00 0.00 0.00 2.29
62 63 3.818210 TCATGCTTCCACGCTTAGAAAAA 59.182 39.130 0.00 0.00 0.00 1.94
63 64 4.458989 TCATGCTTCCACGCTTAGAAAAAT 59.541 37.500 0.00 0.00 0.00 1.82
64 65 5.645929 TCATGCTTCCACGCTTAGAAAAATA 59.354 36.000 0.00 0.00 0.00 1.40
65 66 5.950758 TGCTTCCACGCTTAGAAAAATAA 57.049 34.783 0.00 0.00 0.00 1.40
66 67 6.509418 TGCTTCCACGCTTAGAAAAATAAT 57.491 33.333 0.00 0.00 0.00 1.28
67 68 7.618502 TGCTTCCACGCTTAGAAAAATAATA 57.381 32.000 0.00 0.00 0.00 0.98
68 69 8.046294 TGCTTCCACGCTTAGAAAAATAATAA 57.954 30.769 0.00 0.00 0.00 1.40
69 70 8.181573 TGCTTCCACGCTTAGAAAAATAATAAG 58.818 33.333 0.00 0.00 0.00 1.73
70 71 7.644157 GCTTCCACGCTTAGAAAAATAATAAGG 59.356 37.037 0.00 0.00 0.00 2.69
71 72 8.570068 TTCCACGCTTAGAAAAATAATAAGGT 57.430 30.769 0.00 0.00 0.00 3.50
72 73 9.669887 TTCCACGCTTAGAAAAATAATAAGGTA 57.330 29.630 0.00 0.00 0.00 3.08
73 74 9.101655 TCCACGCTTAGAAAAATAATAAGGTAC 57.898 33.333 0.00 0.00 0.00 3.34
74 75 8.885722 CCACGCTTAGAAAAATAATAAGGTACA 58.114 33.333 0.00 0.00 0.00 2.90
92 93 7.803487 AGGTACAAGTTAACCTACTAATGGT 57.197 36.000 0.88 0.00 44.40 3.55
93 94 7.618137 AGGTACAAGTTAACCTACTAATGGTG 58.382 38.462 0.88 0.00 44.40 4.17
94 95 7.236225 AGGTACAAGTTAACCTACTAATGGTGT 59.764 37.037 0.88 0.00 44.40 4.16
95 96 7.547019 GGTACAAGTTAACCTACTAATGGTGTC 59.453 40.741 0.88 0.00 37.93 3.67
96 97 6.470278 ACAAGTTAACCTACTAATGGTGTCC 58.530 40.000 0.88 0.00 37.93 4.02
97 98 6.271624 ACAAGTTAACCTACTAATGGTGTCCT 59.728 38.462 0.88 0.00 37.93 3.85
98 99 7.455638 ACAAGTTAACCTACTAATGGTGTCCTA 59.544 37.037 0.88 0.00 37.93 2.94
99 100 7.415592 AGTTAACCTACTAATGGTGTCCTAC 57.584 40.000 0.88 0.00 37.93 3.18
100 101 6.955851 AGTTAACCTACTAATGGTGTCCTACA 59.044 38.462 0.88 0.00 37.93 2.74
111 112 2.465860 TGTCCTACACAAATGTCCCG 57.534 50.000 0.00 0.00 40.48 5.14
112 113 1.084289 GTCCTACACAAATGTCCCGC 58.916 55.000 0.00 0.00 40.48 6.13
113 114 0.687920 TCCTACACAAATGTCCCGCA 59.312 50.000 0.00 0.00 40.48 5.69
114 115 1.086696 CCTACACAAATGTCCCGCAG 58.913 55.000 0.00 0.00 40.48 5.18
115 116 0.447801 CTACACAAATGTCCCGCAGC 59.552 55.000 0.00 0.00 40.48 5.25
116 117 0.250510 TACACAAATGTCCCGCAGCA 60.251 50.000 0.00 0.00 40.48 4.41
117 118 1.106351 ACACAAATGTCCCGCAGCAA 61.106 50.000 0.00 0.00 31.55 3.91
118 119 0.664166 CACAAATGTCCCGCAGCAAC 60.664 55.000 0.00 0.00 0.00 4.17
119 120 1.442520 CAAATGTCCCGCAGCAACG 60.443 57.895 0.00 0.00 0.00 4.10
120 121 3.267597 AAATGTCCCGCAGCAACGC 62.268 57.895 0.00 0.00 0.00 4.84
131 132 2.891448 GCAACGCGCGGGGTATTA 60.891 61.111 35.22 0.00 0.00 0.98
132 133 2.248835 GCAACGCGCGGGGTATTAT 61.249 57.895 35.22 7.19 0.00 1.28
133 134 1.857364 CAACGCGCGGGGTATTATC 59.143 57.895 35.22 0.00 0.00 1.75
134 135 0.599204 CAACGCGCGGGGTATTATCT 60.599 55.000 35.22 5.42 0.00 1.98
135 136 0.961019 AACGCGCGGGGTATTATCTA 59.039 50.000 35.22 0.00 0.00 1.98
136 137 0.524862 ACGCGCGGGGTATTATCTAG 59.475 55.000 35.22 0.47 0.00 2.43
149 150 6.352394 GGGTATTATCTAGTTGTCCCAACACA 60.352 42.308 9.53 0.00 34.35 3.72
155 156 1.525077 TTGTCCCAACACAGGCGAC 60.525 57.895 0.00 0.00 34.35 5.19
162 163 1.159285 CAACACAGGCGACACATGAT 58.841 50.000 0.00 0.00 0.00 2.45
164 165 0.391661 ACACAGGCGACACATGATCC 60.392 55.000 0.00 0.00 0.00 3.36
201 202 0.179032 AGACGTGTGGCATTGGTGAA 60.179 50.000 0.00 0.00 0.00 3.18
222 223 1.235724 TGTCGCTTCGAGACAAGAGA 58.764 50.000 3.69 0.00 44.56 3.10
225 226 3.246619 GTCGCTTCGAGACAAGAGAAAT 58.753 45.455 0.00 0.00 36.23 2.17
229 230 3.617531 GCTTCGAGACAAGAGAAATCCCA 60.618 47.826 0.00 0.00 0.00 4.37
236 237 3.782046 ACAAGAGAAATCCCACGTATCG 58.218 45.455 0.00 0.00 0.00 2.92
237 238 3.123804 CAAGAGAAATCCCACGTATCGG 58.876 50.000 0.00 0.00 0.00 4.18
241 242 1.865340 GAAATCCCACGTATCGGAAGC 59.135 52.381 2.63 0.00 0.00 3.86
263 264 4.195308 GCTGGTTCGCGATGGTAA 57.805 55.556 10.88 0.00 0.00 2.85
288 289 1.795170 GCGCGATGGGCCATTTGTAT 61.795 55.000 22.20 0.00 38.94 2.29
289 290 0.040157 CGCGATGGGCCATTTGTATG 60.040 55.000 22.20 7.84 38.94 2.39
317 318 7.660112 TGATAATAATGCACAATGGACCATTC 58.340 34.615 17.16 7.06 31.05 2.67
324 325 3.366679 GCACAATGGACCATTCTTGACTG 60.367 47.826 22.05 12.24 31.05 3.51
325 326 2.821969 ACAATGGACCATTCTTGACTGC 59.178 45.455 17.16 0.00 31.05 4.40
329 330 2.906389 TGGACCATTCTTGACTGCTACT 59.094 45.455 0.00 0.00 0.00 2.57
330 331 3.055819 TGGACCATTCTTGACTGCTACTC 60.056 47.826 0.00 0.00 0.00 2.59
332 333 2.237392 ACCATTCTTGACTGCTACTCCC 59.763 50.000 0.00 0.00 0.00 4.30
333 334 2.503356 CCATTCTTGACTGCTACTCCCT 59.497 50.000 0.00 0.00 0.00 4.20
334 335 3.431486 CCATTCTTGACTGCTACTCCCTC 60.431 52.174 0.00 0.00 0.00 4.30
335 336 1.853963 TCTTGACTGCTACTCCCTCC 58.146 55.000 0.00 0.00 0.00 4.30
336 337 0.457851 CTTGACTGCTACTCCCTCCG 59.542 60.000 0.00 0.00 0.00 4.63
337 338 0.251653 TTGACTGCTACTCCCTCCGT 60.252 55.000 0.00 0.00 0.00 4.69
338 339 0.622136 TGACTGCTACTCCCTCCGTA 59.378 55.000 0.00 0.00 0.00 4.02
339 340 1.005097 TGACTGCTACTCCCTCCGTAA 59.995 52.381 0.00 0.00 0.00 3.18
340 341 2.097825 GACTGCTACTCCCTCCGTAAA 58.902 52.381 0.00 0.00 0.00 2.01
341 342 1.823610 ACTGCTACTCCCTCCGTAAAC 59.176 52.381 0.00 0.00 0.00 2.01
342 343 2.100989 CTGCTACTCCCTCCGTAAACT 58.899 52.381 0.00 0.00 0.00 2.66
343 344 3.285484 CTGCTACTCCCTCCGTAAACTA 58.715 50.000 0.00 0.00 0.00 2.24
344 345 3.698040 CTGCTACTCCCTCCGTAAACTAA 59.302 47.826 0.00 0.00 0.00 2.24
345 346 4.284178 TGCTACTCCCTCCGTAAACTAAT 58.716 43.478 0.00 0.00 0.00 1.73
346 347 5.448654 TGCTACTCCCTCCGTAAACTAATA 58.551 41.667 0.00 0.00 0.00 0.98
347 348 6.073314 TGCTACTCCCTCCGTAAACTAATAT 58.927 40.000 0.00 0.00 0.00 1.28
348 349 7.233632 TGCTACTCCCTCCGTAAACTAATATA 58.766 38.462 0.00 0.00 0.00 0.86
349 350 7.725397 TGCTACTCCCTCCGTAAACTAATATAA 59.275 37.037 0.00 0.00 0.00 0.98
350 351 8.242739 GCTACTCCCTCCGTAAACTAATATAAG 58.757 40.741 0.00 0.00 0.00 1.73
351 352 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
352 353 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
353 354 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
354 355 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
355 356 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
356 357 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
357 358 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
386 387 6.663944 ACTATTTTAGTGATCCAAACGCTC 57.336 37.500 0.00 0.00 37.69 5.03
387 388 6.407202 ACTATTTTAGTGATCCAAACGCTCT 58.593 36.000 0.00 0.00 37.69 4.09
388 389 6.879458 ACTATTTTAGTGATCCAAACGCTCTT 59.121 34.615 0.00 0.00 37.69 2.85
389 390 8.038944 ACTATTTTAGTGATCCAAACGCTCTTA 58.961 33.333 0.00 0.00 37.69 2.10
390 391 7.865706 ATTTTAGTGATCCAAACGCTCTTAT 57.134 32.000 0.00 0.00 0.00 1.73
391 392 8.958119 ATTTTAGTGATCCAAACGCTCTTATA 57.042 30.769 0.00 0.00 0.00 0.98
392 393 8.958119 TTTTAGTGATCCAAACGCTCTTATAT 57.042 30.769 0.00 0.00 0.00 0.86
393 394 8.958119 TTTAGTGATCCAAACGCTCTTATATT 57.042 30.769 0.00 0.00 0.00 1.28
395 396 9.692749 TTAGTGATCCAAACGCTCTTATATTAG 57.307 33.333 0.00 0.00 0.00 1.73
396 397 7.727181 AGTGATCCAAACGCTCTTATATTAGT 58.273 34.615 0.00 0.00 0.00 2.24
397 398 8.204836 AGTGATCCAAACGCTCTTATATTAGTT 58.795 33.333 0.00 0.00 0.00 2.24
398 399 8.827677 GTGATCCAAACGCTCTTATATTAGTTT 58.172 33.333 0.00 0.00 32.82 2.66
401 402 9.826574 ATCCAAACGCTCTTATATTAGTTTACA 57.173 29.630 0.00 0.00 31.63 2.41
402 403 9.309516 TCCAAACGCTCTTATATTAGTTTACAG 57.690 33.333 0.00 0.00 31.63 2.74
403 404 9.309516 CCAAACGCTCTTATATTAGTTTACAGA 57.690 33.333 0.00 0.00 31.63 3.41
405 406 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
406 407 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
407 408 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
408 409 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
409 410 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
492 493 1.999051 CGAGAATGTGCACGGCTAC 59.001 57.895 13.13 2.84 0.00 3.58
505 506 0.741574 CGGCTACACGGCATTGGTTA 60.742 55.000 0.00 0.00 38.27 2.85
506 507 1.455248 GGCTACACGGCATTGGTTAA 58.545 50.000 0.00 0.00 38.25 2.01
507 508 1.131693 GGCTACACGGCATTGGTTAAC 59.868 52.381 0.00 0.00 38.25 2.01
508 509 1.807742 GCTACACGGCATTGGTTAACA 59.192 47.619 8.10 0.00 0.00 2.41
509 510 2.226912 GCTACACGGCATTGGTTAACAA 59.773 45.455 8.10 0.00 44.54 2.83
510 511 3.304794 GCTACACGGCATTGGTTAACAAA 60.305 43.478 8.10 2.29 43.46 2.83
575 576 0.931005 GTGCTCGGATCGTTTCATCC 59.069 55.000 0.00 0.00 39.35 3.51
604 620 2.980476 CAATCAGCTACCGCGTAGTATG 59.020 50.000 4.92 10.15 42.32 2.39
662 679 2.890945 CAGATTTGGTTCCCGGTCTTTT 59.109 45.455 0.00 0.00 0.00 2.27
692 742 3.173853 GCTGCCGCGTGAATAACA 58.826 55.556 4.92 0.00 0.00 2.41
757 844 3.782244 GCAACTCACGGCAGCTCG 61.782 66.667 0.00 0.00 0.00 5.03
771 858 2.459934 CAGCTCGTGGTTTCCAAAAAC 58.540 47.619 0.00 0.00 43.36 2.43
855 1011 1.145803 GTTGAGCGAAAACGCCTACT 58.854 50.000 10.85 0.00 35.12 2.57
857 1013 1.986698 TGAGCGAAAACGCCTACTAC 58.013 50.000 10.85 0.00 35.12 2.73
858 1014 1.270274 TGAGCGAAAACGCCTACTACA 59.730 47.619 10.85 0.89 35.12 2.74
860 1016 2.733026 GAGCGAAAACGCCTACTACAAA 59.267 45.455 10.85 0.00 35.12 2.83
861 1017 3.332034 AGCGAAAACGCCTACTACAAAT 58.668 40.909 10.85 0.00 35.12 2.32
872 1029 3.576982 CCTACTACAAATATCCCTCCGCA 59.423 47.826 0.00 0.00 0.00 5.69
873 1030 3.470645 ACTACAAATATCCCTCCGCAC 57.529 47.619 0.00 0.00 0.00 5.34
874 1031 2.104281 ACTACAAATATCCCTCCGCACC 59.896 50.000 0.00 0.00 0.00 5.01
900 1059 4.514577 AGCGGGATCTGCGAACGG 62.515 66.667 5.11 0.00 37.44 4.44
903 1062 2.577059 GGGATCTGCGAACGGACA 59.423 61.111 0.00 0.00 32.77 4.02
904 1063 1.079405 GGGATCTGCGAACGGACAA 60.079 57.895 0.00 0.00 32.77 3.18
910 1069 1.347817 CTGCGAACGGACAAGCTCTC 61.348 60.000 0.00 0.00 0.00 3.20
927 1086 1.214175 TCTCTCTCTCCGCCTCTCAAT 59.786 52.381 0.00 0.00 0.00 2.57
930 1096 1.753649 CTCTCTCCGCCTCTCAATCAA 59.246 52.381 0.00 0.00 0.00 2.57
949 1115 5.229921 TCAAGTCCACTCGTTTCAAAAAG 57.770 39.130 0.00 0.00 0.00 2.27
972 1138 1.335810 GTCCACCCGTTTCAAACTTCC 59.664 52.381 0.00 0.00 0.00 3.46
1176 1368 3.423179 CCTCTCGAGGTACGCTCC 58.577 66.667 13.56 0.00 43.61 4.70
1182 1374 2.829458 GAGGTACGCTCCCTCGCT 60.829 66.667 0.45 0.00 39.22 4.93
1183 1375 2.829458 AGGTACGCTCCCTCGCTC 60.829 66.667 0.00 0.00 0.00 5.03
1289 1484 1.398390 GCTGATTCGTGGTCACCATTC 59.602 52.381 0.00 0.00 35.28 2.67
1295 1490 2.434185 TGGTCACCATTCGAGCGC 60.434 61.111 0.00 0.00 33.56 5.92
1304 1499 1.065031 CATTCGAGCGCGGGTTTTTG 61.065 55.000 10.69 0.00 38.28 2.44
1349 1937 2.502080 CGGATCGCGATCGGCTAC 60.502 66.667 35.36 23.10 40.44 3.58
1383 1971 1.452145 GGTGGGCTTTCGCTGTCAAA 61.452 55.000 0.00 0.00 36.09 2.69
1420 2009 5.333721 CGGGTGCCATTGTTTGTTTATTTTC 60.334 40.000 0.00 0.00 0.00 2.29
1424 2017 7.358848 GGTGCCATTGTTTGTTTATTTTCGTAG 60.359 37.037 0.00 0.00 0.00 3.51
1434 2027 5.350365 TGTTTATTTTCGTAGATGCGCTTCT 59.650 36.000 26.52 26.52 35.04 2.85
1479 2072 3.181497 CGATTATTGCCACCAAAGACCAG 60.181 47.826 0.00 0.00 34.05 4.00
1508 2112 1.127213 GCATTGCAATTGTCGCTTTGG 59.873 47.619 9.83 0.00 0.00 3.28
1643 2382 0.249657 GCGGGTTTTGTGAAATGCCA 60.250 50.000 0.00 0.00 0.00 4.92
1922 3001 4.476113 TCTGGAAGTGGATCAGGAATGATT 59.524 41.667 0.00 0.00 33.76 2.57
2045 3129 7.595502 GGACGATGAACTTTATGTCCTACATAG 59.404 40.741 2.09 0.00 41.56 2.23
2237 3368 6.998074 AGAAATGTGTGGTCTCTTGTTTCATA 59.002 34.615 0.00 0.00 0.00 2.15
2238 3369 6.560253 AATGTGTGGTCTCTTGTTTCATAC 57.440 37.500 0.00 0.00 0.00 2.39
2239 3370 5.290493 TGTGTGGTCTCTTGTTTCATACT 57.710 39.130 0.00 0.00 0.00 2.12
2240 3371 5.297547 TGTGTGGTCTCTTGTTTCATACTC 58.702 41.667 0.00 0.00 0.00 2.59
2241 3372 4.691216 GTGTGGTCTCTTGTTTCATACTCC 59.309 45.833 0.00 0.00 0.00 3.85
2242 3373 4.254492 GTGGTCTCTTGTTTCATACTCCC 58.746 47.826 0.00 0.00 0.00 4.30
2243 3374 4.020128 GTGGTCTCTTGTTTCATACTCCCT 60.020 45.833 0.00 0.00 0.00 4.20
2244 3375 4.223032 TGGTCTCTTGTTTCATACTCCCTC 59.777 45.833 0.00 0.00 0.00 4.30
2245 3376 4.383226 GGTCTCTTGTTTCATACTCCCTCC 60.383 50.000 0.00 0.00 0.00 4.30
2246 3377 3.447586 TCTCTTGTTTCATACTCCCTCCG 59.552 47.826 0.00 0.00 0.00 4.63
2247 3378 3.170717 TCTTGTTTCATACTCCCTCCGT 58.829 45.455 0.00 0.00 0.00 4.69
2248 3379 3.581332 TCTTGTTTCATACTCCCTCCGTT 59.419 43.478 0.00 0.00 0.00 4.44
2249 3380 3.604875 TGTTTCATACTCCCTCCGTTC 57.395 47.619 0.00 0.00 0.00 3.95
2250 3381 2.235402 TGTTTCATACTCCCTCCGTTCC 59.765 50.000 0.00 0.00 0.00 3.62
2251 3382 2.235402 GTTTCATACTCCCTCCGTTCCA 59.765 50.000 0.00 0.00 0.00 3.53
2252 3383 2.241281 TCATACTCCCTCCGTTCCAA 57.759 50.000 0.00 0.00 0.00 3.53
2253 3384 2.542550 TCATACTCCCTCCGTTCCAAA 58.457 47.619 0.00 0.00 0.00 3.28
2254 3385 2.907696 TCATACTCCCTCCGTTCCAAAA 59.092 45.455 0.00 0.00 0.00 2.44
2255 3386 3.521937 TCATACTCCCTCCGTTCCAAAAT 59.478 43.478 0.00 0.00 0.00 1.82
2256 3387 4.717778 TCATACTCCCTCCGTTCCAAAATA 59.282 41.667 0.00 0.00 0.00 1.40
2257 3388 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2258 3389 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2259 3390 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2260 3391 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2261 3392 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2262 3393 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2263 3394 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2264 3395 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2265 3396 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2266 3397 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2267 3398 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2268 3399 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
2269 3400 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
2270 3401 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
2271 3402 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
2287 3418 9.991906 ACTCAACTTTATACTAACTTTAGTGCA 57.008 29.630 11.24 0.00 43.44 4.57
2299 3430 4.853924 CTTTAGTGCAAAGTTGGGTCAT 57.146 40.909 0.00 0.00 39.10 3.06
2300 3431 4.798574 CTTTAGTGCAAAGTTGGGTCATC 58.201 43.478 0.00 0.00 39.10 2.92
2301 3432 2.664402 AGTGCAAAGTTGGGTCATCT 57.336 45.000 0.00 0.00 0.00 2.90
2302 3433 3.788227 AGTGCAAAGTTGGGTCATCTA 57.212 42.857 0.00 0.00 0.00 1.98
2303 3434 4.307032 AGTGCAAAGTTGGGTCATCTAT 57.693 40.909 0.00 0.00 0.00 1.98
2304 3435 4.666512 AGTGCAAAGTTGGGTCATCTATT 58.333 39.130 0.00 0.00 0.00 1.73
2305 3436 5.079643 AGTGCAAAGTTGGGTCATCTATTT 58.920 37.500 0.00 0.00 0.00 1.40
2306 3437 5.539955 AGTGCAAAGTTGGGTCATCTATTTT 59.460 36.000 0.00 0.00 0.00 1.82
2307 3438 5.634859 GTGCAAAGTTGGGTCATCTATTTTG 59.365 40.000 0.00 0.00 0.00 2.44
2308 3439 5.170748 GCAAAGTTGGGTCATCTATTTTGG 58.829 41.667 0.00 0.00 0.00 3.28
2309 3440 5.047377 GCAAAGTTGGGTCATCTATTTTGGA 60.047 40.000 0.00 0.00 0.00 3.53
2310 3441 6.518200 GCAAAGTTGGGTCATCTATTTTGGAA 60.518 38.462 0.00 0.00 0.00 3.53
2311 3442 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
2312 3443 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
2313 3444 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
2314 3445 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
2315 3446 3.877508 GGGTCATCTATTTTGGAACGGAG 59.122 47.826 0.00 0.00 0.00 4.63
2316 3447 3.877508 GGTCATCTATTTTGGAACGGAGG 59.122 47.826 0.00 0.00 0.00 4.30
2317 3448 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2318 3449 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2319 3450 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2320 3451 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2443 3581 3.467119 GTGTACGTCGGTGCTGCG 61.467 66.667 0.00 0.00 0.00 5.18
2481 3619 8.879759 TCTCAACTAGCCAATAGTAAAAATTCG 58.120 33.333 0.00 0.00 44.26 3.34
2482 3620 8.780846 TCAACTAGCCAATAGTAAAAATTCGA 57.219 30.769 0.00 0.00 44.26 3.71
2544 3682 0.804364 GCCTTGATTGACATGTCGCA 59.196 50.000 20.54 15.11 0.00 5.10
2857 4008 5.762825 ATTGTGATTCTGTATCCACATGC 57.237 39.130 0.00 0.00 33.14 4.06
2882 4033 7.122204 GCCATTTGTTTACCCTCTTATTGTACT 59.878 37.037 0.00 0.00 0.00 2.73
3071 4228 6.795399 TGCAAGCTAATATTCAGTTTTAGCC 58.205 36.000 9.58 0.00 45.67 3.93
3082 4239 5.906113 TCAGTTTTAGCCAACAACAAGAA 57.094 34.783 0.00 0.00 0.00 2.52
3094 4251 5.691754 CCAACAACAAGAAGGCTTACATTTC 59.308 40.000 0.00 0.00 31.81 2.17
3130 4287 0.481128 AAACCACCATCCCGGAAAGT 59.519 50.000 0.73 0.00 38.63 2.66
3153 4311 6.774170 AGTGGCATGCTCATTTTCAAGATATA 59.226 34.615 18.92 0.00 0.00 0.86
3154 4312 6.860023 GTGGCATGCTCATTTTCAAGATATAC 59.140 38.462 18.92 0.00 0.00 1.47
3254 4413 9.520204 CAATCATTATGTTTGAGTATGTTTCCC 57.480 33.333 9.66 0.00 30.71 3.97
3364 4524 8.806146 ACAGAAAATTATGGTGCTTAATTCTGT 58.194 29.630 10.55 10.55 34.91 3.41
3806 4972 7.223193 TCAAATCAAGACATGCTTTCTTGTTTG 59.777 33.333 24.25 24.25 46.81 2.93
3950 5116 1.988107 AGTCATGCAGGAGAAAAGGGA 59.012 47.619 0.00 0.00 0.00 4.20
4043 5210 6.932356 AAAAGTACTACAGGATGATGCATG 57.068 37.500 2.46 0.00 39.69 4.06
4083 5250 4.482952 AACCCTCCTAAACTAATGGACG 57.517 45.455 0.00 0.00 0.00 4.79
4174 5341 3.820467 TGTAGCATGCTAGCTGTTGTTTT 59.180 39.130 27.54 0.00 46.11 2.43
4371 5564 6.318648 AGAGTTGTCTTAACAGTTTCATTGCA 59.681 34.615 0.00 0.00 36.57 4.08
4460 5781 7.380602 GCAACATTATAGCCTGCTTAGAATTTG 59.619 37.037 0.00 0.00 0.00 2.32
4498 5819 8.060931 TCTATATGCAACTATAGAAGCCTGAG 57.939 38.462 12.61 5.63 37.63 3.35
4804 6130 0.798776 GCACAGTGACAGTACATGCC 59.201 55.000 4.15 0.00 32.14 4.40
4859 6185 1.251251 GCAATTCCACTGCCTGAACT 58.749 50.000 0.00 0.00 33.51 3.01
4969 6295 4.415596 TGGTTTTTATTGTGCAGGATCCT 58.584 39.130 9.02 9.02 0.00 3.24
5029 6355 8.345565 GTTGCCATTCCTATATGTAAAACAGAG 58.654 37.037 0.00 0.00 0.00 3.35
5248 6579 4.060205 AGTGTTTTGATTTTGATGCCAGC 58.940 39.130 0.00 0.00 0.00 4.85
5317 6662 4.037208 GCATCTTTTGTCATTGATCCCGAT 59.963 41.667 0.00 0.00 0.00 4.18
5318 6663 5.239306 GCATCTTTTGTCATTGATCCCGATA 59.761 40.000 0.00 0.00 0.00 2.92
5443 6790 5.652452 CCATAAGGGACAAAAGAAGGTTAGG 59.348 44.000 0.00 0.00 40.01 2.69
5454 6801 9.197306 ACAAAAGAAGGTTAGGTTTCAACTATT 57.803 29.630 0.00 0.00 0.00 1.73
5530 6879 2.682856 TGTGTTCAGTTGAAAGGACAGC 59.317 45.455 0.00 0.00 35.58 4.40
5637 6986 7.174426 GTGGCTGTAGATTTTACTGGTTAGTTT 59.826 37.037 0.00 0.00 38.36 2.66
5736 7096 3.288099 AGCATCAAATGGTGACCCC 57.712 52.632 0.00 0.00 39.72 4.95
6106 7469 6.002653 ACATTCCCCTATAAACCAACTCTC 57.997 41.667 0.00 0.00 0.00 3.20
6120 7483 4.253685 CCAACTCTCGGACATTTGTGTAT 58.746 43.478 0.00 0.00 0.00 2.29
6123 7486 5.344743 ACTCTCGGACATTTGTGTATCAT 57.655 39.130 0.00 0.00 0.00 2.45
6124 7487 6.465439 ACTCTCGGACATTTGTGTATCATA 57.535 37.500 0.00 0.00 0.00 2.15
6125 7488 6.873997 ACTCTCGGACATTTGTGTATCATAA 58.126 36.000 0.00 0.00 0.00 1.90
6126 7489 6.980978 ACTCTCGGACATTTGTGTATCATAAG 59.019 38.462 0.00 0.00 0.00 1.73
6127 7490 7.107639 TCTCGGACATTTGTGTATCATAAGA 57.892 36.000 0.00 0.00 0.00 2.10
6128 7491 6.978659 TCTCGGACATTTGTGTATCATAAGAC 59.021 38.462 0.00 0.00 0.00 3.01
6129 7492 6.873997 TCGGACATTTGTGTATCATAAGACT 58.126 36.000 0.00 0.00 0.00 3.24
6130 7493 8.002984 TCGGACATTTGTGTATCATAAGACTA 57.997 34.615 0.00 0.00 0.00 2.59
6131 7494 8.471609 TCGGACATTTGTGTATCATAAGACTAA 58.528 33.333 0.00 0.00 0.00 2.24
6147 7510 9.994432 CATAAGACTAAACTTTTTGAGCTATGG 57.006 33.333 0.00 0.00 0.00 2.74
6167 7530 3.194861 GGGCTTTGTTTGTTTCCTTGTC 58.805 45.455 0.00 0.00 0.00 3.18
6486 7909 6.040278 TGTTCCTGAAATGTTGCTGAATGTTA 59.960 34.615 0.00 0.00 0.00 2.41
6487 7910 6.258230 TCCTGAAATGTTGCTGAATGTTAG 57.742 37.500 0.00 0.00 0.00 2.34
6521 7944 8.986929 AAAAGCAGCCTATAGAATACTTGATT 57.013 30.769 0.00 0.00 0.00 2.57
6889 8327 4.655649 TGTATGCAGGATGGAGTTATCACT 59.344 41.667 0.00 0.00 42.42 3.41
7044 8482 4.021192 TCATCCCCTGAACATTTTTCTTGC 60.021 41.667 0.00 0.00 0.00 4.01
7118 8556 9.989869 CTATTTCTTAGTAGCTTTAGTTTTGGC 57.010 33.333 0.00 0.00 0.00 4.52
7416 8859 1.570347 GGGTTGCAACGCGTGACATA 61.570 55.000 27.91 2.68 32.08 2.29
7524 8972 2.158871 AGTACCACCGCTGAAAACAAGA 60.159 45.455 0.00 0.00 0.00 3.02
7530 8992 1.264288 CCGCTGAAAACAAGAGTGACC 59.736 52.381 0.00 0.00 0.00 4.02
7532 8994 2.210116 GCTGAAAACAAGAGTGACCGA 58.790 47.619 0.00 0.00 0.00 4.69
7533 8995 2.808543 GCTGAAAACAAGAGTGACCGAT 59.191 45.455 0.00 0.00 0.00 4.18
7534 8996 3.120511 GCTGAAAACAAGAGTGACCGATC 60.121 47.826 0.00 0.00 0.00 3.69
7535 8997 3.057019 TGAAAACAAGAGTGACCGATCG 58.943 45.455 8.51 8.51 0.00 3.69
7536 8998 3.243602 TGAAAACAAGAGTGACCGATCGA 60.244 43.478 18.66 0.00 0.00 3.59
7537 8999 2.349297 AACAAGAGTGACCGATCGAC 57.651 50.000 18.66 7.04 0.00 4.20
7538 9000 0.168348 ACAAGAGTGACCGATCGACG 59.832 55.000 18.66 2.80 42.18 5.12
7539 9001 0.446616 CAAGAGTGACCGATCGACGA 59.553 55.000 18.66 0.00 45.77 4.20
7540 9002 0.447011 AAGAGTGACCGATCGACGAC 59.553 55.000 18.66 9.36 45.77 4.34
7541 9003 1.296722 GAGTGACCGATCGACGACG 60.297 63.158 18.66 6.28 45.77 5.12
7746 9218 1.811266 CAAGCTGGTCTGCGCGTAT 60.811 57.895 8.43 0.00 38.13 3.06
7898 9389 5.390613 GCTGCAAACACTACGTATGAAAAT 58.609 37.500 0.00 0.00 0.00 1.82
7903 9394 7.915923 TGCAAACACTACGTATGAAAATTGAAA 59.084 29.630 0.00 0.00 0.00 2.69
8070 9580 0.683828 ATGCAATTCATGGGTCGGCA 60.684 50.000 0.00 0.00 33.26 5.69
8099 9609 3.846180 CCTGTTGGCTGTTGCTGT 58.154 55.556 0.00 0.00 39.59 4.40
8113 9623 5.227569 TGTTGCTGTAGAAGATGAAGGAA 57.772 39.130 0.00 0.00 0.00 3.36
8157 9667 4.990543 TCACATTTGTTAAGCAGAGACG 57.009 40.909 0.00 0.00 0.00 4.18
8159 9669 4.211164 TCACATTTGTTAAGCAGAGACGTG 59.789 41.667 0.00 0.00 0.00 4.49
8181 9692 6.916387 CGTGTATAATGTATCCAAGACTCGTT 59.084 38.462 0.00 0.00 0.00 3.85
8192 9703 4.570772 TCCAAGACTCGTTTCTTTTGTCTG 59.429 41.667 0.00 0.00 37.93 3.51
8198 9709 7.378966 AGACTCGTTTCTTTTGTCTGATGATA 58.621 34.615 0.00 0.00 36.74 2.15
8202 9713 8.777865 TCGTTTCTTTTGTCTGATGATATTCT 57.222 30.769 0.00 0.00 0.00 2.40
8218 9729 8.930846 ATGATATTCTATCTTTTCCTTGGTGG 57.069 34.615 0.00 0.00 37.10 4.61
8263 9775 3.009473 TGAAATTCCTCTTGGTCTCAGGG 59.991 47.826 0.00 0.00 34.23 4.45
8345 9858 0.098905 GCTCGTAGCACACTCGATCA 59.901 55.000 0.00 0.00 41.89 2.92
8350 9863 3.128764 TCGTAGCACACTCGATCAATTCT 59.871 43.478 0.00 0.00 0.00 2.40
8351 9864 3.241553 CGTAGCACACTCGATCAATTCTG 59.758 47.826 0.00 0.00 0.00 3.02
8361 9874 6.758416 CACTCGATCAATTCTGGAGTCAATAA 59.242 38.462 0.00 0.00 0.00 1.40
8364 9877 6.931281 TCGATCAATTCTGGAGTCAATAATCC 59.069 38.462 0.00 0.00 36.05 3.01
8394 9910 9.953697 CTTAAGGTTAGTACTGTCATCTATGTC 57.046 37.037 5.39 0.00 0.00 3.06
8424 9940 0.982704 TTCAATGGGTTGGCATTGGG 59.017 50.000 0.00 0.00 38.81 4.12
8443 9959 2.545952 GGGTATCCAGTAGTCGCATGTG 60.546 54.545 0.00 0.00 0.00 3.21
8463 9979 1.280421 GGCTGGAGACAATGAAGGAGT 59.720 52.381 0.00 0.00 42.06 3.85
8464 9980 2.354259 GCTGGAGACAATGAAGGAGTG 58.646 52.381 0.00 0.00 42.06 3.51
8466 9982 3.557898 GCTGGAGACAATGAAGGAGTGAA 60.558 47.826 0.00 0.00 42.06 3.18
8467 9983 4.645535 CTGGAGACAATGAAGGAGTGAAA 58.354 43.478 0.00 0.00 42.06 2.69
8468 9984 5.246981 TGGAGACAATGAAGGAGTGAAAT 57.753 39.130 0.00 0.00 37.44 2.17
8469 9985 5.634118 TGGAGACAATGAAGGAGTGAAATT 58.366 37.500 0.00 0.00 37.44 1.82
8470 9986 6.070656 TGGAGACAATGAAGGAGTGAAATTT 58.929 36.000 0.00 0.00 37.44 1.82
8471 9987 6.016024 TGGAGACAATGAAGGAGTGAAATTTG 60.016 38.462 0.00 0.00 37.44 2.32
8472 9988 6.015940 GGAGACAATGAAGGAGTGAAATTTGT 60.016 38.462 0.00 0.00 0.00 2.83
8473 9989 6.974965 AGACAATGAAGGAGTGAAATTTGTC 58.025 36.000 0.00 0.00 0.00 3.18
8474 9990 6.774656 AGACAATGAAGGAGTGAAATTTGTCT 59.225 34.615 8.68 8.68 0.00 3.41
8476 9992 6.547141 ACAATGAAGGAGTGAAATTTGTCTGA 59.453 34.615 0.00 0.00 0.00 3.27
8477 9993 6.566197 ATGAAGGAGTGAAATTTGTCTGAC 57.434 37.500 0.00 0.00 0.00 3.51
8479 9995 5.528690 TGAAGGAGTGAAATTTGTCTGACTG 59.471 40.000 9.51 0.00 0.00 3.51
8480 9996 3.817647 AGGAGTGAAATTTGTCTGACTGC 59.182 43.478 9.51 0.00 0.00 4.40
8482 9998 3.466836 AGTGAAATTTGTCTGACTGCGA 58.533 40.909 9.51 0.00 0.00 5.10
8483 9999 3.876914 AGTGAAATTTGTCTGACTGCGAA 59.123 39.130 9.51 0.00 0.00 4.70
8484 10000 4.516698 AGTGAAATTTGTCTGACTGCGAAT 59.483 37.500 9.51 2.14 0.00 3.34
8490 10077 8.816640 AAATTTGTCTGACTGCGAATAAATTT 57.183 26.923 9.51 12.70 33.89 1.82
8494 10081 5.015733 GTCTGACTGCGAATAAATTTGTCG 58.984 41.667 17.19 17.19 37.82 4.35
8505 10092 7.742963 GCGAATAAATTTGTCGACTTAACTCAA 59.257 33.333 22.79 0.00 36.92 3.02
8518 10105 9.505995 TCGACTTAACTCAACATTTTAAAAACC 57.494 29.630 4.44 0.00 0.00 3.27
8525 10112 7.941919 ACTCAACATTTTAAAAACCTCTCTCC 58.058 34.615 4.44 0.00 0.00 3.71
8528 10115 8.977412 TCAACATTTTAAAAACCTCTCTCCTTT 58.023 29.630 4.44 0.00 0.00 3.11
8533 10120 9.877222 ATTTTAAAAACCTCTCTCCTTTCCTTA 57.123 29.630 4.44 0.00 0.00 2.69
8534 10121 8.919777 TTTAAAAACCTCTCTCCTTTCCTTAG 57.080 34.615 0.00 0.00 0.00 2.18
8535 10122 4.561500 AAACCTCTCTCCTTTCCTTAGC 57.438 45.455 0.00 0.00 0.00 3.09
8536 10123 2.104170 ACCTCTCTCCTTTCCTTAGCG 58.896 52.381 0.00 0.00 0.00 4.26
8537 10124 2.291670 ACCTCTCTCCTTTCCTTAGCGA 60.292 50.000 0.00 0.00 0.00 4.93
8548 10135 6.039941 TCCTTTCCTTAGCGATGAAACAAAAA 59.960 34.615 0.00 0.00 0.00 1.94
8553 10140 5.925969 CCTTAGCGATGAAACAAAAACCAAT 59.074 36.000 0.00 0.00 0.00 3.16
8555 10142 7.596995 CCTTAGCGATGAAACAAAAACCAATTA 59.403 33.333 0.00 0.00 0.00 1.40
8556 10143 9.139174 CTTAGCGATGAAACAAAAACCAATTAT 57.861 29.630 0.00 0.00 0.00 1.28
8580 10167 3.118542 GCAACAAAGCTCTTGGTTTCTG 58.881 45.455 11.59 0.00 41.31 3.02
8620 10207 2.510064 TAACGCGGGAAATGAGCCGT 62.510 55.000 12.47 0.00 0.00 5.68
8626 10213 2.750888 GGAAATGAGCCGTGCCGTC 61.751 63.158 0.00 0.00 0.00 4.79
8659 10246 1.227002 GCGGAGGTCCAACGATCTC 60.227 63.158 9.14 0.00 44.42 2.75
8667 10254 2.795470 GGTCCAACGATCTCGCTATTTC 59.205 50.000 0.00 0.00 44.43 2.17
8675 10262 5.992729 ACGATCTCGCTATTTCTCTAAGAC 58.007 41.667 0.00 0.00 44.43 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.506328 AGGTAAGTACTGTCAAATGAAAACC 57.494 36.000 0.00 0.00 0.00 3.27
1 2 9.447040 GAAAGGTAAGTACTGTCAAATGAAAAC 57.553 33.333 0.00 0.00 0.00 2.43
4 5 8.918202 ATGAAAGGTAAGTACTGTCAAATGAA 57.082 30.769 0.00 0.00 0.00 2.57
5 6 8.918202 AATGAAAGGTAAGTACTGTCAAATGA 57.082 30.769 0.00 0.00 0.00 2.57
6 7 9.398170 CAAATGAAAGGTAAGTACTGTCAAATG 57.602 33.333 0.00 0.00 0.00 2.32
7 8 9.349713 TCAAATGAAAGGTAAGTACTGTCAAAT 57.650 29.630 0.00 0.00 0.00 2.32
8 9 8.617809 GTCAAATGAAAGGTAAGTACTGTCAAA 58.382 33.333 0.00 0.00 0.00 2.69
9 10 7.771361 TGTCAAATGAAAGGTAAGTACTGTCAA 59.229 33.333 0.00 0.00 0.00 3.18
10 11 7.276658 TGTCAAATGAAAGGTAAGTACTGTCA 58.723 34.615 0.00 0.00 0.00 3.58
11 12 7.724305 TGTCAAATGAAAGGTAAGTACTGTC 57.276 36.000 0.00 0.00 0.00 3.51
12 13 7.308589 GCATGTCAAATGAAAGGTAAGTACTGT 60.309 37.037 0.00 0.00 0.00 3.55
13 14 7.023575 GCATGTCAAATGAAAGGTAAGTACTG 58.976 38.462 0.00 0.00 0.00 2.74
14 15 6.151144 GGCATGTCAAATGAAAGGTAAGTACT 59.849 38.462 0.00 0.00 0.00 2.73
15 16 6.151144 AGGCATGTCAAATGAAAGGTAAGTAC 59.849 38.462 0.00 0.00 0.00 2.73
16 17 6.245408 AGGCATGTCAAATGAAAGGTAAGTA 58.755 36.000 0.00 0.00 0.00 2.24
17 18 5.079643 AGGCATGTCAAATGAAAGGTAAGT 58.920 37.500 0.00 0.00 0.00 2.24
18 19 5.183713 TGAGGCATGTCAAATGAAAGGTAAG 59.816 40.000 0.00 0.00 0.00 2.34
19 20 5.076182 TGAGGCATGTCAAATGAAAGGTAA 58.924 37.500 0.00 0.00 0.00 2.85
20 21 4.661222 TGAGGCATGTCAAATGAAAGGTA 58.339 39.130 0.00 0.00 0.00 3.08
21 22 3.499338 TGAGGCATGTCAAATGAAAGGT 58.501 40.909 0.00 0.00 0.00 3.50
22 23 4.430007 CATGAGGCATGTCAAATGAAAGG 58.570 43.478 0.00 0.00 37.12 3.11
23 24 3.863424 GCATGAGGCATGTCAAATGAAAG 59.137 43.478 14.41 0.00 43.10 2.62
24 25 3.852286 GCATGAGGCATGTCAAATGAAA 58.148 40.909 14.41 0.00 43.10 2.69
25 26 3.513680 GCATGAGGCATGTCAAATGAA 57.486 42.857 14.41 0.00 43.10 2.57
37 38 0.744414 TAAGCGTGGAAGCATGAGGC 60.744 55.000 0.00 0.00 45.30 4.70
38 39 1.134699 TCTAAGCGTGGAAGCATGAGG 60.135 52.381 0.00 0.00 40.15 3.86
39 40 2.299993 TCTAAGCGTGGAAGCATGAG 57.700 50.000 0.00 0.00 40.15 2.90
40 41 2.760634 TTCTAAGCGTGGAAGCATGA 57.239 45.000 0.00 0.00 40.15 3.07
41 42 3.829886 TTTTCTAAGCGTGGAAGCATG 57.170 42.857 0.00 0.00 40.15 4.06
42 43 6.509418 TTATTTTTCTAAGCGTGGAAGCAT 57.491 33.333 0.00 0.00 40.15 3.79
43 44 5.950758 TTATTTTTCTAAGCGTGGAAGCA 57.049 34.783 0.00 0.00 40.15 3.91
44 45 7.644157 CCTTATTATTTTTCTAAGCGTGGAAGC 59.356 37.037 0.00 0.00 37.41 3.86
45 46 8.674607 ACCTTATTATTTTTCTAAGCGTGGAAG 58.325 33.333 0.00 0.00 0.00 3.46
46 47 8.570068 ACCTTATTATTTTTCTAAGCGTGGAA 57.430 30.769 0.00 0.00 0.00 3.53
47 48 9.101655 GTACCTTATTATTTTTCTAAGCGTGGA 57.898 33.333 0.00 0.00 0.00 4.02
48 49 8.885722 TGTACCTTATTATTTTTCTAAGCGTGG 58.114 33.333 0.00 0.00 0.00 4.94
66 67 9.325248 ACCATTAGTAGGTTAACTTGTACCTTA 57.675 33.333 5.42 0.00 42.01 2.69
67 68 8.098912 CACCATTAGTAGGTTAACTTGTACCTT 58.901 37.037 5.42 0.00 42.01 3.50
68 69 7.236225 ACACCATTAGTAGGTTAACTTGTACCT 59.764 37.037 5.42 0.00 46.28 3.08
69 70 7.389232 ACACCATTAGTAGGTTAACTTGTACC 58.611 38.462 5.42 0.00 37.23 3.34
70 71 7.547019 GGACACCATTAGTAGGTTAACTTGTAC 59.453 40.741 5.42 5.55 37.23 2.90
71 72 7.455638 AGGACACCATTAGTAGGTTAACTTGTA 59.544 37.037 5.42 0.00 37.23 2.41
72 73 6.271624 AGGACACCATTAGTAGGTTAACTTGT 59.728 38.462 5.42 0.00 37.23 3.16
73 74 6.708285 AGGACACCATTAGTAGGTTAACTTG 58.292 40.000 5.42 0.00 37.23 3.16
74 75 6.947376 AGGACACCATTAGTAGGTTAACTT 57.053 37.500 5.42 0.00 37.23 2.66
75 76 6.955851 TGTAGGACACCATTAGTAGGTTAACT 59.044 38.462 5.42 0.00 37.23 2.24
76 77 7.038048 GTGTAGGACACCATTAGTAGGTTAAC 58.962 42.308 0.00 0.00 43.05 2.01
77 78 7.174107 GTGTAGGACACCATTAGTAGGTTAA 57.826 40.000 0.00 0.00 43.05 2.01
78 79 6.780457 GTGTAGGACACCATTAGTAGGTTA 57.220 41.667 0.00 0.00 43.05 2.85
79 80 5.672421 GTGTAGGACACCATTAGTAGGTT 57.328 43.478 0.00 0.00 43.05 3.50
92 93 1.609580 GCGGGACATTTGTGTAGGACA 60.610 52.381 0.00 0.00 0.00 4.02
93 94 1.084289 GCGGGACATTTGTGTAGGAC 58.916 55.000 0.00 0.00 0.00 3.85
94 95 0.687920 TGCGGGACATTTGTGTAGGA 59.312 50.000 0.00 0.00 0.00 2.94
95 96 1.086696 CTGCGGGACATTTGTGTAGG 58.913 55.000 0.00 0.00 0.00 3.18
96 97 0.447801 GCTGCGGGACATTTGTGTAG 59.552 55.000 0.00 0.00 0.00 2.74
97 98 0.250510 TGCTGCGGGACATTTGTGTA 60.251 50.000 0.00 0.00 0.00 2.90
98 99 1.106351 TTGCTGCGGGACATTTGTGT 61.106 50.000 0.00 0.00 0.00 3.72
99 100 0.664166 GTTGCTGCGGGACATTTGTG 60.664 55.000 0.00 0.00 0.00 3.33
100 101 1.659794 GTTGCTGCGGGACATTTGT 59.340 52.632 0.00 0.00 0.00 2.83
101 102 1.442520 CGTTGCTGCGGGACATTTG 60.443 57.895 0.00 0.00 0.00 2.32
102 103 2.953821 CGTTGCTGCGGGACATTT 59.046 55.556 0.00 0.00 0.00 2.32
103 104 3.737172 GCGTTGCTGCGGGACATT 61.737 61.111 0.00 0.00 0.00 2.71
113 114 2.653953 ATAATACCCCGCGCGTTGCT 62.654 55.000 29.95 10.35 43.27 3.91
114 115 2.166584 GATAATACCCCGCGCGTTGC 62.167 60.000 29.95 8.80 41.47 4.17
115 116 0.599204 AGATAATACCCCGCGCGTTG 60.599 55.000 29.95 21.02 0.00 4.10
116 117 0.961019 TAGATAATACCCCGCGCGTT 59.039 50.000 29.95 18.17 0.00 4.84
117 118 0.524862 CTAGATAATACCCCGCGCGT 59.475 55.000 29.95 13.36 0.00 6.01
118 119 0.524862 ACTAGATAATACCCCGCGCG 59.475 55.000 25.67 25.67 0.00 6.86
119 120 2.288640 ACAACTAGATAATACCCCGCGC 60.289 50.000 0.00 0.00 0.00 6.86
120 121 3.572584 GACAACTAGATAATACCCCGCG 58.427 50.000 0.00 0.00 0.00 6.46
121 122 3.306571 GGGACAACTAGATAATACCCCGC 60.307 52.174 0.00 0.00 0.00 6.13
122 123 3.899360 TGGGACAACTAGATAATACCCCG 59.101 47.826 0.00 0.00 35.69 5.73
149 150 0.977627 TCCTGGATCATGTGTCGCCT 60.978 55.000 0.00 0.00 0.00 5.52
155 156 0.464373 CCGGGTTCCTGGATCATGTG 60.464 60.000 11.03 0.00 0.00 3.21
162 163 1.452801 GTCAAACCGGGTTCCTGGA 59.547 57.895 22.05 6.19 0.00 3.86
164 165 0.949105 CTCGTCAAACCGGGTTCCTG 60.949 60.000 13.78 9.06 0.00 3.86
211 212 2.263077 CGTGGGATTTCTCTTGTCTCG 58.737 52.381 0.00 0.00 0.00 4.04
216 217 3.123804 CCGATACGTGGGATTTCTCTTG 58.876 50.000 0.00 0.00 0.00 3.02
222 223 1.208535 TGCTTCCGATACGTGGGATTT 59.791 47.619 0.00 0.00 31.80 2.17
225 226 0.609151 TTTGCTTCCGATACGTGGGA 59.391 50.000 0.00 0.00 0.00 4.37
229 230 2.075761 GCGTTTGCTTCCGATACGT 58.924 52.632 0.00 0.00 38.39 3.57
267 268 2.834505 AAATGGCCCATCGCGCAT 60.835 55.556 8.75 0.00 38.94 4.73
270 271 0.040157 CATACAAATGGCCCATCGCG 60.040 55.000 0.00 0.00 38.94 5.87
288 289 6.209192 GGTCCATTGTGCATTATTATCATCCA 59.791 38.462 0.00 0.00 0.00 3.41
289 290 6.209192 TGGTCCATTGTGCATTATTATCATCC 59.791 38.462 0.00 0.00 0.00 3.51
294 295 7.844493 AGAATGGTCCATTGTGCATTATTAT 57.156 32.000 22.12 0.00 33.90 1.28
306 307 3.446442 AGCAGTCAAGAATGGTCCATT 57.554 42.857 17.33 17.33 36.72 3.16
317 318 0.457851 CGGAGGGAGTAGCAGTCAAG 59.542 60.000 0.00 0.00 0.00 3.02
324 325 4.933505 ATTAGTTTACGGAGGGAGTAGC 57.066 45.455 0.00 0.00 0.00 3.58
325 326 9.512588 TCTTATATTAGTTTACGGAGGGAGTAG 57.487 37.037 0.00 0.00 0.00 2.57
329 330 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
330 331 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
363 364 6.407202 AGAGCGTTTGGATCACTAAAATAGT 58.593 36.000 0.00 0.00 40.28 2.12
364 365 6.910536 AGAGCGTTTGGATCACTAAAATAG 57.089 37.500 0.00 0.00 32.03 1.73
365 366 8.958119 ATAAGAGCGTTTGGATCACTAAAATA 57.042 30.769 0.00 0.00 32.03 1.40
366 367 7.865706 ATAAGAGCGTTTGGATCACTAAAAT 57.134 32.000 0.00 0.00 32.03 1.82
367 368 8.958119 ATATAAGAGCGTTTGGATCACTAAAA 57.042 30.769 0.00 0.00 32.03 1.52
368 369 8.958119 AATATAAGAGCGTTTGGATCACTAAA 57.042 30.769 0.00 0.00 32.03 1.85
369 370 9.692749 CTAATATAAGAGCGTTTGGATCACTAA 57.307 33.333 0.00 0.00 32.03 2.24
370 371 8.857098 ACTAATATAAGAGCGTTTGGATCACTA 58.143 33.333 0.00 0.00 32.03 2.74
371 372 7.727181 ACTAATATAAGAGCGTTTGGATCACT 58.273 34.615 0.00 0.00 32.03 3.41
372 373 7.948278 ACTAATATAAGAGCGTTTGGATCAC 57.052 36.000 0.00 0.00 32.03 3.06
373 374 8.958119 AAACTAATATAAGAGCGTTTGGATCA 57.042 30.769 0.00 0.00 32.03 2.92
375 376 9.826574 TGTAAACTAATATAAGAGCGTTTGGAT 57.173 29.630 0.00 0.00 0.00 3.41
376 377 9.309516 CTGTAAACTAATATAAGAGCGTTTGGA 57.690 33.333 0.00 0.00 0.00 3.53
377 378 9.309516 TCTGTAAACTAATATAAGAGCGTTTGG 57.690 33.333 0.00 0.00 0.00 3.28
379 380 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
380 381 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
381 382 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
382 383 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
383 384 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
429 430 8.208718 TGTAATAATCAGGAATTTCTTGACCG 57.791 34.615 12.80 0.00 35.26 4.79
520 521 2.279918 ATCCCGCGTTACCGATGC 60.280 61.111 4.92 0.00 35.63 3.91
551 552 0.999406 AAACGATCCGAGCACATTCG 59.001 50.000 0.00 0.00 40.18 3.34
552 553 1.999735 TGAAACGATCCGAGCACATTC 59.000 47.619 0.00 0.00 0.00 2.67
553 554 2.093306 TGAAACGATCCGAGCACATT 57.907 45.000 0.00 0.00 0.00 2.71
554 555 2.205074 GATGAAACGATCCGAGCACAT 58.795 47.619 0.00 0.00 0.00 3.21
562 563 0.746563 TTGGCCGGATGAAACGATCC 60.747 55.000 5.05 0.00 38.93 3.36
564 565 1.308998 GATTGGCCGGATGAAACGAT 58.691 50.000 5.05 0.00 0.00 3.73
575 576 0.947244 GGTAGCTGATTGATTGGCCG 59.053 55.000 0.00 0.00 0.00 6.13
578 579 0.583438 CGCGGTAGCTGATTGATTGG 59.417 55.000 0.00 0.00 42.32 3.16
604 620 1.671379 GTGGAGCAAACGGGACCTC 60.671 63.158 0.00 0.00 0.00 3.85
691 741 5.048713 GGTCCTATATTTCTTCGGCCATTTG 60.049 44.000 2.24 0.00 0.00 2.32
692 742 5.070685 GGTCCTATATTTCTTCGGCCATTT 58.929 41.667 2.24 0.00 0.00 2.32
729 781 2.489329 CCGTGAGTTGCCTGATGATTTT 59.511 45.455 0.00 0.00 0.00 1.82
855 1011 1.069513 CGGTGCGGAGGGATATTTGTA 59.930 52.381 0.00 0.00 0.00 2.41
857 1013 0.105964 TCGGTGCGGAGGGATATTTG 59.894 55.000 0.00 0.00 0.00 2.32
858 1014 0.393077 CTCGGTGCGGAGGGATATTT 59.607 55.000 0.00 0.00 0.00 1.40
860 1016 2.574955 GCTCGGTGCGGAGGGATAT 61.575 63.158 8.48 0.00 34.56 1.63
861 1017 3.224324 GCTCGGTGCGGAGGGATA 61.224 66.667 8.48 0.00 34.56 2.59
891 1050 1.347817 GAGAGCTTGTCCGTTCGCAG 61.348 60.000 0.00 0.00 0.00 5.18
900 1059 0.100503 GCGGAGAGAGAGAGCTTGTC 59.899 60.000 0.00 0.00 0.00 3.18
903 1062 0.751643 GAGGCGGAGAGAGAGAGCTT 60.752 60.000 0.00 0.00 0.00 3.74
904 1063 1.152963 GAGGCGGAGAGAGAGAGCT 60.153 63.158 0.00 0.00 0.00 4.09
910 1069 1.397672 TGATTGAGAGGCGGAGAGAG 58.602 55.000 0.00 0.00 0.00 3.20
927 1086 4.938832 TCTTTTTGAAACGAGTGGACTTGA 59.061 37.500 0.80 0.00 0.00 3.02
930 1096 4.941873 ACTTCTTTTTGAAACGAGTGGACT 59.058 37.500 0.00 0.00 33.79 3.85
949 1115 2.294979 AGTTTGAAACGGGTGGACTTC 58.705 47.619 1.97 0.00 36.23 3.01
1107 1291 4.351938 TGGTCGACCGCCTCGTTG 62.352 66.667 28.70 0.00 43.45 4.10
1238 1433 2.125512 CTGGGAAAGTCTCCGCGG 60.126 66.667 22.12 22.12 46.51 6.46
1265 1460 0.716108 GTGACCACGAATCAGCGAAG 59.284 55.000 0.00 0.00 34.83 3.79
1271 1466 1.273886 TCGAATGGTGACCACGAATCA 59.726 47.619 13.95 0.00 35.80 2.57
1289 1484 4.398598 CCCAAAAACCCGCGCTCG 62.399 66.667 5.56 0.00 0.00 5.03
1295 1490 1.457831 TTCCCACCCCAAAAACCCG 60.458 57.895 0.00 0.00 0.00 5.28
1304 1499 0.617535 CCCAAATTCCTTCCCACCCC 60.618 60.000 0.00 0.00 0.00 4.95
1348 1936 2.744709 CCAAATTCCGGTCGCCGT 60.745 61.111 15.38 0.00 46.80 5.68
1383 1971 0.394352 GCACCCGAAATCCACCTCAT 60.394 55.000 0.00 0.00 0.00 2.90
1420 2009 1.202188 TGACAGAGAAGCGCATCTACG 60.202 52.381 16.15 11.81 0.00 3.51
1424 2017 0.997932 CTGTGACAGAGAAGCGCATC 59.002 55.000 11.47 7.57 32.44 3.91
1508 2112 5.178061 GGATCCAATCATCCAAACCAAAAC 58.822 41.667 6.95 0.00 42.02 2.43
1586 2324 4.925836 TCGAGTAAAAGCCCCCTAAATTT 58.074 39.130 0.00 0.00 0.00 1.82
1783 2861 4.922964 CGCATGCGGAAACTGAAAAACAG 61.923 47.826 31.99 0.00 42.77 3.16
1879 2958 6.483974 TCCAGAAAATACTACAGCGTCAAAAA 59.516 34.615 0.00 0.00 0.00 1.94
1891 2970 6.672218 TCCTGATCCACTTCCAGAAAATACTA 59.328 38.462 0.00 0.00 0.00 1.82
1922 3001 8.269317 CACCCACTCCAACCTAAAGTATATTTA 58.731 37.037 0.00 0.00 0.00 1.40
1930 3009 1.423921 ACCACCCACTCCAACCTAAAG 59.576 52.381 0.00 0.00 0.00 1.85
1938 3017 2.040359 TGTCCACCACCCACTCCA 60.040 61.111 0.00 0.00 0.00 3.86
1956 3038 6.777526 TCCATTTTTAAAGCAAACGATTGG 57.222 33.333 7.57 0.00 37.02 3.16
2237 3368 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2238 3369 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2239 3370 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2240 3371 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2241 3372 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2242 3373 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2243 3374 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2244 3375 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
2245 3376 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
2261 3392 9.991906 TGCACTAAAGTTAGTATAAAGTTGAGT 57.008 29.630 3.46 0.00 41.82 3.41
2279 3410 4.469657 AGATGACCCAACTTTGCACTAAA 58.530 39.130 0.00 0.00 0.00 1.85
2280 3411 4.098914 AGATGACCCAACTTTGCACTAA 57.901 40.909 0.00 0.00 0.00 2.24
2281 3412 3.788227 AGATGACCCAACTTTGCACTA 57.212 42.857 0.00 0.00 0.00 2.74
2282 3413 2.664402 AGATGACCCAACTTTGCACT 57.336 45.000 0.00 0.00 0.00 4.40
2283 3414 5.391312 AAATAGATGACCCAACTTTGCAC 57.609 39.130 0.00 0.00 0.00 4.57
2284 3415 5.279406 CCAAAATAGATGACCCAACTTTGCA 60.279 40.000 0.00 0.00 0.00 4.08
2285 3416 5.047377 TCCAAAATAGATGACCCAACTTTGC 60.047 40.000 0.00 0.00 0.00 3.68
2286 3417 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2287 3418 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
2288 3419 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
2289 3420 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
2290 3421 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
2291 3422 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
2292 3423 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
2293 3424 3.877508 CTCCGTTCCAAAATAGATGACCC 59.122 47.826 0.00 0.00 0.00 4.46
2294 3425 3.877508 CCTCCGTTCCAAAATAGATGACC 59.122 47.826 0.00 0.00 0.00 4.02
2295 3426 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2296 3427 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2297 3428 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2298 3429 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2299 3430 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2300 3431 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2301 3432 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
2302 3433 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
2303 3434 4.376225 AAATACTCCCTCCGTTCCAAAA 57.624 40.909 0.00 0.00 0.00 2.44
2304 3435 4.376225 AAAATACTCCCTCCGTTCCAAA 57.624 40.909 0.00 0.00 0.00 3.28
2305 3436 4.778958 TCTAAAATACTCCCTCCGTTCCAA 59.221 41.667 0.00 0.00 0.00 3.53
2306 3437 4.355549 TCTAAAATACTCCCTCCGTTCCA 58.644 43.478 0.00 0.00 0.00 3.53
2307 3438 4.405036 ACTCTAAAATACTCCCTCCGTTCC 59.595 45.833 0.00 0.00 0.00 3.62
2308 3439 5.595257 ACTCTAAAATACTCCCTCCGTTC 57.405 43.478 0.00 0.00 0.00 3.95
2309 3440 5.482878 TGAACTCTAAAATACTCCCTCCGTT 59.517 40.000 0.00 0.00 0.00 4.44
2310 3441 5.021458 TGAACTCTAAAATACTCCCTCCGT 58.979 41.667 0.00 0.00 0.00 4.69
2311 3442 5.593679 TGAACTCTAAAATACTCCCTCCG 57.406 43.478 0.00 0.00 0.00 4.63
2312 3443 7.147637 ACAGATGAACTCTAAAATACTCCCTCC 60.148 40.741 0.00 0.00 31.13 4.30
2313 3444 7.787028 ACAGATGAACTCTAAAATACTCCCTC 58.213 38.462 0.00 0.00 31.13 4.30
2314 3445 7.741554 ACAGATGAACTCTAAAATACTCCCT 57.258 36.000 0.00 0.00 31.13 4.20
2315 3446 9.535878 CTAACAGATGAACTCTAAAATACTCCC 57.464 37.037 0.00 0.00 31.13 4.30
2344 3475 9.149225 GAACATGCATTGGAAACATTATAAACA 57.851 29.630 0.00 0.00 42.32 2.83
2443 3581 6.049149 TGGCTAGTTGAGAACATATTAGCAC 58.951 40.000 0.00 0.00 0.00 4.40
2487 3625 8.426489 ACATCCACTATCCGCTAGTTTATTTTA 58.574 33.333 0.00 0.00 38.68 1.52
2492 3630 4.891168 TGACATCCACTATCCGCTAGTTTA 59.109 41.667 0.00 0.00 38.68 2.01
2501 3639 6.538021 GCAGATCATATTGACATCCACTATCC 59.462 42.308 0.00 0.00 0.00 2.59
2857 4008 8.458843 CAGTACAATAAGAGGGTAAACAAATGG 58.541 37.037 0.00 0.00 0.00 3.16
2882 4033 3.227614 GGCCCTAGAAAAGGTGAAAACA 58.772 45.455 0.00 0.00 44.90 2.83
2900 4051 6.019779 TGTTCATGTACACTTATTTTGGCC 57.980 37.500 0.00 0.00 0.00 5.36
3071 4228 5.399301 CGAAATGTAAGCCTTCTTGTTGTTG 59.601 40.000 0.00 0.00 33.85 3.33
3082 4239 5.023533 TCAGCTATTCGAAATGTAAGCCT 57.976 39.130 0.00 0.00 0.00 4.58
3094 4251 5.088739 GTGGTTTCATGTTTCAGCTATTCG 58.911 41.667 0.00 0.00 0.00 3.34
3130 4287 6.774170 AGTATATCTTGAAAATGAGCATGCCA 59.226 34.615 15.66 12.73 0.00 4.92
3153 4311 8.250332 TCAAAATAAACTGAAAAAGACAGCAGT 58.750 29.630 0.00 0.00 42.91 4.40
3154 4312 8.633075 TCAAAATAAACTGAAAAAGACAGCAG 57.367 30.769 0.00 0.00 38.74 4.24
3242 4401 2.749621 CTGGTGCAAGGGAAACATACTC 59.250 50.000 0.00 0.00 0.00 2.59
3254 4413 3.319137 TTCTAGTGTAGCTGGTGCAAG 57.681 47.619 0.00 0.00 42.74 4.01
3367 4527 8.682710 ACATACACATACACAAGAAAAACAACT 58.317 29.630 0.00 0.00 0.00 3.16
3756 4922 6.179906 AGCATGGCTACACAGATATTAAGT 57.820 37.500 0.00 0.00 36.99 2.24
3897 5063 5.991861 TGTACTGACCACAAACCTCTTTTA 58.008 37.500 0.00 0.00 0.00 1.52
4043 5210 5.241728 AGGGTTAACTCTTTGATGAGCAAAC 59.758 40.000 0.85 0.00 41.37 2.93
4104 5271 5.760253 CCCTAAACATGTAATCTGGCTACTG 59.240 44.000 0.00 0.00 0.00 2.74
4189 5356 1.210722 TGTTACATTATGCAGGGGCGA 59.789 47.619 0.00 0.00 45.35 5.54
4190 5357 1.674359 TGTTACATTATGCAGGGGCG 58.326 50.000 0.00 0.00 45.35 6.13
4191 5358 2.226437 CGATGTTACATTATGCAGGGGC 59.774 50.000 0.00 0.00 41.68 5.80
4192 5359 2.813754 CCGATGTTACATTATGCAGGGG 59.186 50.000 0.00 0.00 0.00 4.79
4474 5795 7.835822 ACTCAGGCTTCTATAGTTGCATATAG 58.164 38.462 16.86 7.71 37.17 1.31
4498 5819 9.013490 GTTCAACATCTGCATAATACAAATGAC 57.987 33.333 0.00 0.00 0.00 3.06
4804 6130 3.748048 TCCTTGATGAAGCAGTTTCTTCG 59.252 43.478 7.96 0.00 44.01 3.79
4859 6185 5.917541 GAGAACGTGTCTTTGTTATCCAA 57.082 39.130 0.00 0.00 36.41 3.53
5029 6355 6.868339 CAGGGTTTAAATTGTTCTTGATCACC 59.132 38.462 0.00 0.00 0.00 4.02
5248 6579 2.159254 CCCAATAAGTTCATGGTTGCCG 60.159 50.000 0.00 0.00 32.13 5.69
5800 7160 3.127030 CCTAGCAACGTCAGAAAATTCCC 59.873 47.826 0.00 0.00 0.00 3.97
6106 7469 8.642908 TTAGTCTTATGATACACAAATGTCCG 57.357 34.615 0.00 0.00 40.48 4.79
6123 7486 7.120726 GCCCATAGCTCAAAAAGTTTAGTCTTA 59.879 37.037 0.00 0.00 38.99 2.10
6124 7487 6.071896 GCCCATAGCTCAAAAAGTTTAGTCTT 60.072 38.462 0.00 0.00 38.99 3.01
6125 7488 5.416013 GCCCATAGCTCAAAAAGTTTAGTCT 59.584 40.000 0.00 0.00 38.99 3.24
6126 7489 5.641709 GCCCATAGCTCAAAAAGTTTAGTC 58.358 41.667 0.00 0.00 38.99 2.59
6127 7490 5.644977 GCCCATAGCTCAAAAAGTTTAGT 57.355 39.130 0.00 0.00 38.99 2.24
6147 7510 4.123497 AGACAAGGAAACAAACAAAGCC 57.877 40.909 0.00 0.00 0.00 4.35
6167 7530 7.806690 TCAGTTAATACTACTGCAAAAGCAAG 58.193 34.615 0.00 0.00 42.12 4.01
6407 7785 3.123804 CGTGCCAATAGGTGACATCTAC 58.876 50.000 0.00 0.00 37.19 2.59
6408 7786 2.102420 CCGTGCCAATAGGTGACATCTA 59.898 50.000 0.00 0.00 37.19 1.98
6409 7787 1.134401 CCGTGCCAATAGGTGACATCT 60.134 52.381 0.00 0.00 37.19 2.90
6410 7788 1.299541 CCGTGCCAATAGGTGACATC 58.700 55.000 0.00 0.00 37.19 3.06
6549 7973 7.607991 CCATCAGCCGGTAAATATAAAAGATCT 59.392 37.037 1.90 0.00 0.00 2.75
6567 7992 2.158696 AGAAATCTAGGTGCCATCAGCC 60.159 50.000 0.00 0.00 42.71 4.85
6820 8251 3.197333 AGAGGTCACATGACAGATTCCTG 59.803 47.826 13.77 0.00 46.47 3.86
6821 8252 3.197333 CAGAGGTCACATGACAGATTCCT 59.803 47.826 13.77 0.54 46.47 3.36
6822 8253 3.055530 ACAGAGGTCACATGACAGATTCC 60.056 47.826 13.77 0.00 46.47 3.01
6823 8254 4.199432 ACAGAGGTCACATGACAGATTC 57.801 45.455 13.77 5.85 46.47 2.52
6824 8255 4.040829 TGAACAGAGGTCACATGACAGATT 59.959 41.667 13.77 1.10 46.47 2.40
6825 8256 3.580022 TGAACAGAGGTCACATGACAGAT 59.420 43.478 13.77 0.00 46.47 2.90
6826 8257 2.965147 TGAACAGAGGTCACATGACAGA 59.035 45.455 13.77 0.00 46.47 3.41
6827 8258 3.391506 TGAACAGAGGTCACATGACAG 57.608 47.619 13.77 3.50 46.47 3.51
6828 8259 3.836365 TTGAACAGAGGTCACATGACA 57.164 42.857 13.77 0.00 46.47 3.58
6829 8260 5.499139 TTTTTGAACAGAGGTCACATGAC 57.501 39.130 0.00 3.27 44.04 3.06
6889 8327 5.360714 AGAATCTTTTGTTTCTTGCTGGTCA 59.639 36.000 0.00 0.00 35.58 4.02
6961 8399 3.726557 TGAGTGAAATCAGCATTCCCT 57.273 42.857 0.00 0.00 0.00 4.20
7044 8482 2.158986 AGCTCATTCAAGACCGAGATGG 60.159 50.000 0.00 0.00 46.41 3.51
7118 8556 3.726517 CAGCGACAAACTGCCGGG 61.727 66.667 2.18 0.00 0.00 5.73
7404 8847 0.601558 ACTGGACTATGTCACGCGTT 59.398 50.000 10.22 0.00 33.68 4.84
7416 8859 0.544357 TCATGGGGACGAACTGGACT 60.544 55.000 0.00 0.00 0.00 3.85
7524 8972 1.739196 TCGTCGTCGATCGGTCACT 60.739 57.895 16.41 0.00 41.35 3.41
7534 8996 3.301835 CCTGCTGATAAAAATCGTCGTCG 60.302 47.826 0.00 0.00 38.55 5.12
7535 8997 3.617263 ACCTGCTGATAAAAATCGTCGTC 59.383 43.478 0.00 0.00 0.00 4.20
7536 8998 3.370978 CACCTGCTGATAAAAATCGTCGT 59.629 43.478 0.00 0.00 0.00 4.34
7537 8999 3.242413 CCACCTGCTGATAAAAATCGTCG 60.242 47.826 0.00 0.00 0.00 5.12
7538 9000 3.065371 CCCACCTGCTGATAAAAATCGTC 59.935 47.826 0.00 0.00 0.00 4.20
7539 9001 3.016736 CCCACCTGCTGATAAAAATCGT 58.983 45.455 0.00 0.00 0.00 3.73
7540 9002 2.223572 GCCCACCTGCTGATAAAAATCG 60.224 50.000 0.00 0.00 0.00 3.34
7541 9003 2.760092 TGCCCACCTGCTGATAAAAATC 59.240 45.455 0.00 0.00 0.00 2.17
7542 9004 2.762327 CTGCCCACCTGCTGATAAAAAT 59.238 45.455 0.00 0.00 32.50 1.82
7543 9005 2.170166 CTGCCCACCTGCTGATAAAAA 58.830 47.619 0.00 0.00 32.50 1.94
7680 9145 3.406200 CACAGCTGGGGAGGAGGG 61.406 72.222 19.93 0.00 0.00 4.30
7746 9218 2.869101 TACAATTGCCAGCTGGTACA 57.131 45.000 32.81 20.85 37.57 2.90
7898 9389 7.851228 TCACTAGGAGCTATCTCATTTTTCAA 58.149 34.615 0.00 0.00 41.13 2.69
7903 9394 9.336171 GAAAAATCACTAGGAGCTATCTCATTT 57.664 33.333 0.00 0.00 41.13 2.32
7905 9396 8.261349 AGAAAAATCACTAGGAGCTATCTCAT 57.739 34.615 0.00 0.00 41.13 2.90
7906 9397 7.469318 CGAGAAAAATCACTAGGAGCTATCTCA 60.469 40.741 0.00 0.00 41.13 3.27
7907 9398 6.861055 CGAGAAAAATCACTAGGAGCTATCTC 59.139 42.308 0.00 0.00 38.62 2.75
7908 9399 6.737346 GCGAGAAAAATCACTAGGAGCTATCT 60.737 42.308 0.00 0.00 0.00 1.98
7913 9404 3.308323 CAGCGAGAAAAATCACTAGGAGC 59.692 47.826 0.00 0.00 0.00 4.70
7919 9414 3.058639 GCAGTTCAGCGAGAAAAATCACT 60.059 43.478 0.00 0.00 38.13 3.41
8070 9580 1.176527 CCAACAGGCGACCATTGATT 58.823 50.000 3.67 0.00 0.00 2.57
8192 9703 9.007901 CCACCAAGGAAAAGATAGAATATCATC 57.992 37.037 0.00 0.00 41.22 2.92
8263 9775 6.099159 AGTAAAACCGGCCTTATATCTCTC 57.901 41.667 0.00 0.00 0.00 3.20
8305 9817 4.020928 AGCATGCAAGATTTCATGGACAAA 60.021 37.500 21.98 0.00 40.16 2.83
8408 9924 2.397597 GATACCCAATGCCAACCCATT 58.602 47.619 0.00 0.00 35.90 3.16
8414 9930 2.849943 ACTACTGGATACCCAATGCCAA 59.150 45.455 0.00 0.00 42.98 4.52
8424 9940 2.743938 CCACATGCGACTACTGGATAC 58.256 52.381 0.00 0.00 0.00 2.24
8443 9959 1.280421 ACTCCTTCATTGTCTCCAGCC 59.720 52.381 0.00 0.00 0.00 4.85
8463 9979 6.552859 TTATTCGCAGTCAGACAAATTTCA 57.447 33.333 2.66 0.00 0.00 2.69
8464 9980 8.452989 AATTTATTCGCAGTCAGACAAATTTC 57.547 30.769 2.66 0.00 0.00 2.17
8466 9982 7.867403 ACAAATTTATTCGCAGTCAGACAAATT 59.133 29.630 2.66 1.93 30.33 1.82
8467 9983 7.370383 ACAAATTTATTCGCAGTCAGACAAAT 58.630 30.769 2.66 0.19 0.00 2.32
8468 9984 6.734137 ACAAATTTATTCGCAGTCAGACAAA 58.266 32.000 2.66 0.00 0.00 2.83
8469 9985 6.312399 ACAAATTTATTCGCAGTCAGACAA 57.688 33.333 2.66 0.00 0.00 3.18
8470 9986 5.389411 CGACAAATTTATTCGCAGTCAGACA 60.389 40.000 2.66 0.00 0.00 3.41
8471 9987 5.015733 CGACAAATTTATTCGCAGTCAGAC 58.984 41.667 8.07 0.00 0.00 3.51
8472 9988 4.926832 TCGACAAATTTATTCGCAGTCAGA 59.073 37.500 13.86 5.35 32.70 3.27
8473 9989 5.015733 GTCGACAAATTTATTCGCAGTCAG 58.984 41.667 11.55 3.62 32.70 3.51
8474 9990 4.688879 AGTCGACAAATTTATTCGCAGTCA 59.311 37.500 19.50 0.00 32.70 3.41
8476 9992 5.607119 AAGTCGACAAATTTATTCGCAGT 57.393 34.783 19.50 6.15 32.70 4.40
8477 9993 7.234384 AGTTAAGTCGACAAATTTATTCGCAG 58.766 34.615 19.50 0.00 32.70 5.18
8479 9995 7.231607 TGAGTTAAGTCGACAAATTTATTCGC 58.768 34.615 19.50 10.24 32.70 4.70
8480 9996 9.037417 GTTGAGTTAAGTCGACAAATTTATTCG 57.963 33.333 21.27 12.89 31.83 3.34
8505 10092 7.785028 AGGAAAGGAGAGAGGTTTTTAAAATGT 59.215 33.333 0.55 0.00 0.00 2.71
8512 10099 5.317808 GCTAAGGAAAGGAGAGAGGTTTTT 58.682 41.667 0.00 0.00 0.00 1.94
8516 10103 2.104170 CGCTAAGGAAAGGAGAGAGGT 58.896 52.381 0.00 0.00 0.00 3.85
8518 10105 3.634448 TCATCGCTAAGGAAAGGAGAGAG 59.366 47.826 0.00 0.00 0.00 3.20
8522 10109 4.253685 TGTTTCATCGCTAAGGAAAGGAG 58.746 43.478 0.00 0.00 31.75 3.69
8525 10112 6.143919 GGTTTTTGTTTCATCGCTAAGGAAAG 59.856 38.462 0.00 0.00 31.75 2.62
8528 10115 4.580995 TGGTTTTTGTTTCATCGCTAAGGA 59.419 37.500 0.00 0.00 0.00 3.36
8533 10120 9.086336 CATATAATTGGTTTTTGTTTCATCGCT 57.914 29.630 0.00 0.00 0.00 4.93
8534 10121 7.845622 GCATATAATTGGTTTTTGTTTCATCGC 59.154 33.333 0.00 0.00 0.00 4.58
8535 10122 8.867935 TGCATATAATTGGTTTTTGTTTCATCG 58.132 29.630 0.00 0.00 0.00 3.84
8548 10135 6.780457 AGAGCTTTGTTGCATATAATTGGT 57.220 33.333 0.00 0.00 34.99 3.67
8553 10140 6.588719 AACCAAGAGCTTTGTTGCATATAA 57.411 33.333 0.00 0.00 34.99 0.98
8555 10142 5.244626 AGAAACCAAGAGCTTTGTTGCATAT 59.755 36.000 7.63 0.00 28.91 1.78
8556 10143 4.584325 AGAAACCAAGAGCTTTGTTGCATA 59.416 37.500 7.63 0.00 28.91 3.14
8557 10144 3.385755 AGAAACCAAGAGCTTTGTTGCAT 59.614 39.130 7.63 0.00 28.91 3.96
8599 10186 0.586802 GGCTCATTTCCCGCGTTATC 59.413 55.000 4.92 0.00 0.00 1.75
8626 10213 1.299620 CCGCCCACGTTAGGATACG 60.300 63.158 5.55 0.00 46.52 3.06
8659 10246 8.018677 TCTTTTGTTGTCTTAGAGAAATAGCG 57.981 34.615 0.00 0.00 0.00 4.26
8667 10254 5.294306 TGTGTGCTCTTTTGTTGTCTTAGAG 59.706 40.000 0.00 0.00 36.33 2.43
8675 10262 2.599973 GCAGTTGTGTGCTCTTTTGTTG 59.400 45.455 0.00 0.00 40.54 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.