Multiple sequence alignment - TraesCS1A01G235100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G235100 chr1A 100.000 4924 0 0 1 4924 415581220 415586143 0.000000e+00 9094.0
1 TraesCS1A01G235100 chr1A 86.256 211 11 7 4727 4924 64511934 64511729 3.860000e-51 213.0
2 TraesCS1A01G235100 chr1A 98.276 58 1 0 535 592 578482775 578482832 8.720000e-18 102.0
3 TraesCS1A01G235100 chr1A 98.113 53 1 0 4665 4717 415585833 415585885 5.250000e-15 93.5
4 TraesCS1A01G235100 chr1A 98.113 53 1 0 4614 4666 415585884 415585936 5.250000e-15 93.5
5 TraesCS1A01G235100 chr1D 92.216 1850 72 21 2193 4008 326152404 326154215 0.000000e+00 2553.0
6 TraesCS1A01G235100 chr1D 95.715 1377 43 2 821 2196 326146562 326147923 0.000000e+00 2202.0
7 TraesCS1A01G235100 chr1D 93.066 548 22 6 2 535 326145796 326146341 0.000000e+00 787.0
8 TraesCS1A01G235100 chr1D 90.047 211 7 8 4728 4924 105340378 105340168 1.360000e-65 261.0
9 TraesCS1A01G235100 chr1D 89.286 196 20 1 645 839 326146353 326146548 1.370000e-60 244.0
10 TraesCS1A01G235100 chr1D 90.968 155 10 4 4023 4174 326154297 326154450 6.460000e-49 206.0
11 TraesCS1A01G235100 chr1D 96.552 58 2 0 535 592 204510949 204510892 4.060000e-16 97.1
12 TraesCS1A01G235100 chr1B 95.241 1513 55 4 645 2155 439429808 439431305 0.000000e+00 2379.0
13 TraesCS1A01G235100 chr1B 90.776 1778 75 22 2288 4008 439431468 439433213 0.000000e+00 2292.0
14 TraesCS1A01G235100 chr1B 93.248 548 19 3 1 535 439429254 439429796 0.000000e+00 791.0
15 TraesCS1A01G235100 chr1B 91.892 185 13 1 4168 4352 439434349 439434531 1.760000e-64 257.0
16 TraesCS1A01G235100 chr1B 87.619 210 12 7 4728 4924 24800282 24800074 1.070000e-56 231.0
17 TraesCS1A01G235100 chr1B 87.582 153 8 3 4023 4174 439433303 439433445 3.050000e-37 167.0
18 TraesCS1A01G235100 chr1B 95.122 41 2 0 4377 4417 439434591 439434631 1.140000e-06 65.8
19 TraesCS1A01G235100 chr4A 96.196 184 7 0 1 184 38728635 38728818 8.010000e-78 302.0
20 TraesCS1A01G235100 chr5A 93.596 203 10 1 4725 4924 55098124 55098326 2.880000e-77 300.0
21 TraesCS1A01G235100 chr5A 94.536 183 10 0 2 184 478834100 478833918 2.900000e-72 283.0
22 TraesCS1A01G235100 chr5A 96.667 60 2 0 533 592 322991083 322991142 3.140000e-17 100.0
23 TraesCS1A01G235100 chr4B 93.000 200 10 3 4728 4924 380679872 380679674 6.240000e-74 289.0
24 TraesCS1A01G235100 chr3A 94.565 184 9 1 1 184 692538324 692538142 2.900000e-72 283.0
25 TraesCS1A01G235100 chr7D 90.476 210 7 7 4728 4924 397584162 397584371 1.050000e-66 265.0
26 TraesCS1A01G235100 chr5D 90.476 210 7 7 4728 4924 313347634 313347843 1.050000e-66 265.0
27 TraesCS1A01G235100 chr5B 91.000 200 11 4 4728 4924 289021002 289020807 3.780000e-66 263.0
28 TraesCS1A01G235100 chr7B 89.904 208 8 5 4730 4924 584165383 584165590 6.330000e-64 255.0
29 TraesCS1A01G235100 chr6B 89.573 211 8 8 4728 4924 63387714 63387924 6.330000e-64 255.0
30 TraesCS1A01G235100 chr4D 89.048 210 10 7 4728 4924 38341052 38340843 1.060000e-61 248.0
31 TraesCS1A01G235100 chrUn 88.942 208 10 6 4728 4924 83848592 83848797 1.370000e-60 244.0
32 TraesCS1A01G235100 chrUn 98.276 58 1 0 535 592 29767379 29767322 8.720000e-18 102.0
33 TraesCS1A01G235100 chrUn 89.189 74 6 1 535 608 126748966 126748895 1.890000e-14 91.6
34 TraesCS1A01G235100 chr6D 100.000 58 0 0 535 592 456792687 456792744 1.870000e-19 108.0
35 TraesCS1A01G235100 chr2D 96.825 63 1 1 531 593 637343854 637343793 2.420000e-18 104.0
36 TraesCS1A01G235100 chr6A 98.276 58 1 0 535 592 435338385 435338442 8.720000e-18 102.0
37 TraesCS1A01G235100 chr3D 90.541 74 5 1 535 608 42769818 42769747 4.060000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G235100 chr1A 415581220 415586143 4923 False 3093.666667 9094 98.742000 1 4924 3 chr1A.!!$F2 4923
1 TraesCS1A01G235100 chr1D 326152404 326154450 2046 False 1379.500000 2553 91.592000 2193 4174 2 chr1D.!!$F2 1981
2 TraesCS1A01G235100 chr1D 326145796 326147923 2127 False 1077.666667 2202 92.689000 2 2196 3 chr1D.!!$F1 2194
3 TraesCS1A01G235100 chr1B 439429254 439434631 5377 False 991.966667 2379 92.310167 1 4417 6 chr1B.!!$F1 4416

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
702 718 0.034574 TGCCCACCAGCATATTTCGT 60.035 50.000 0.0 0.0 38.00 3.85 F
1434 1483 0.798776 GGGACTGCAAATGTGTCTCG 59.201 55.000 3.4 0.0 0.00 4.04 F
1626 1675 1.339055 TGCCACTCAAGCATGTCTACC 60.339 52.381 0.0 0.0 34.69 3.18 F
3478 3615 0.391263 GGGGACACTTCAGGTAAGCG 60.391 60.000 0.0 0.0 38.93 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2142 2191 1.160137 GAAGTGTCATGACCTGCACC 58.840 55.000 22.85 4.13 34.44 5.01 R
3035 3172 1.001860 GAGAAGAGCTCAAGGCACACT 59.998 52.381 17.77 2.89 43.38 3.55 R
3613 3760 1.303317 CACCTGAACCGGGAAAGGG 60.303 63.158 19.24 11.15 33.87 3.95 R
4443 5644 0.036164 TATGCGGTGGTGACTTGCTT 59.964 50.000 0.00 0.00 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
317 319 1.374758 CTCCACACTCGGCACTTCC 60.375 63.158 0.00 0.00 0.00 3.46
477 492 2.923605 GCGATGTGCTTCACTTGCAATT 60.924 45.455 0.00 0.00 42.41 2.32
498 513 7.537904 CAATTGACGTGCATTTGTAAATATCG 58.462 34.615 0.00 0.00 34.66 2.92
502 517 7.911343 TGACGTGCATTTGTAAATATCGTAAT 58.089 30.769 0.00 0.00 32.69 1.89
505 520 7.849026 ACGTGCATTTGTAAATATCGTAATGTC 59.151 33.333 0.00 0.00 31.69 3.06
506 521 7.320324 CGTGCATTTGTAAATATCGTAATGTCC 59.680 37.037 0.00 0.00 0.00 4.02
512 527 6.339730 TGTAAATATCGTAATGTCCGTGGTT 58.660 36.000 0.00 0.00 0.00 3.67
527 542 6.425721 TGTCCGTGGTTAAATTGTTCTCTTAG 59.574 38.462 0.00 0.00 0.00 2.18
528 543 6.426025 GTCCGTGGTTAAATTGTTCTCTTAGT 59.574 38.462 0.00 0.00 0.00 2.24
529 544 6.647895 TCCGTGGTTAAATTGTTCTCTTAGTC 59.352 38.462 0.00 0.00 0.00 2.59
530 545 6.649557 CCGTGGTTAAATTGTTCTCTTAGTCT 59.350 38.462 0.00 0.00 0.00 3.24
531 546 7.172703 CCGTGGTTAAATTGTTCTCTTAGTCTT 59.827 37.037 0.00 0.00 0.00 3.01
532 547 9.199982 CGTGGTTAAATTGTTCTCTTAGTCTTA 57.800 33.333 0.00 0.00 0.00 2.10
563 578 3.567209 GGAGGTTATCCCCCGGCC 61.567 72.222 0.00 0.00 43.01 6.13
564 579 2.447959 GAGGTTATCCCCCGGCCT 60.448 66.667 0.00 0.00 0.00 5.19
565 580 2.447959 AGGTTATCCCCCGGCCTC 60.448 66.667 0.00 0.00 0.00 4.70
566 581 2.447959 GGTTATCCCCCGGCCTCT 60.448 66.667 0.00 0.00 0.00 3.69
567 582 2.819284 GGTTATCCCCCGGCCTCTG 61.819 68.421 0.00 0.00 0.00 3.35
568 583 3.168528 TTATCCCCCGGCCTCTGC 61.169 66.667 0.00 0.00 0.00 4.26
569 584 4.490606 TATCCCCCGGCCTCTGCA 62.491 66.667 0.00 0.00 40.13 4.41
570 585 3.792325 TATCCCCCGGCCTCTGCAT 62.792 63.158 0.00 0.00 40.13 3.96
573 588 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
574 589 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
575 590 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
576 591 1.147824 CCGGCCTCTGCATCAGAAT 59.852 57.895 0.00 0.00 40.18 2.40
577 592 1.164662 CCGGCCTCTGCATCAGAATG 61.165 60.000 0.00 0.00 40.18 2.67
588 603 2.027325 TCAGAATGATGCATGCGGC 58.973 52.632 14.09 7.96 42.56 6.53
589 604 1.007734 CAGAATGATGCATGCGGCC 60.008 57.895 14.09 5.01 39.87 6.13
590 605 1.454295 AGAATGATGCATGCGGCCA 60.454 52.632 14.09 10.90 43.89 5.36
591 606 0.826256 AGAATGATGCATGCGGCCAT 60.826 50.000 14.09 12.74 43.89 4.40
600 615 0.940126 CATGCGGCCATGTCTTACTC 59.060 55.000 2.24 0.00 43.07 2.59
617 632 9.998106 TGTCTTACTCTAAAGCATTCTTTTAGT 57.002 29.630 0.00 3.69 42.21 2.24
641 656 9.760926 AGTATACCATCTATGAGCTTATTGAGA 57.239 33.333 8.45 1.68 0.00 3.27
650 665 9.783081 TCTATGAGCTTATTGAGATATTTTGCA 57.217 29.630 0.00 0.00 0.00 4.08
653 668 7.709947 TGAGCTTATTGAGATATTTTGCAAGG 58.290 34.615 0.00 0.00 0.00 3.61
654 669 7.557358 TGAGCTTATTGAGATATTTTGCAAGGA 59.443 33.333 0.00 0.00 0.00 3.36
655 670 8.297470 AGCTTATTGAGATATTTTGCAAGGAA 57.703 30.769 0.00 0.00 0.00 3.36
690 705 6.463995 TCATAAATTTGTATTCTGCCCACC 57.536 37.500 0.00 0.00 0.00 4.61
691 706 5.954752 TCATAAATTTGTATTCTGCCCACCA 59.045 36.000 0.00 0.00 0.00 4.17
701 717 0.664761 CTGCCCACCAGCATATTTCG 59.335 55.000 0.00 0.00 43.09 3.46
702 718 0.034574 TGCCCACCAGCATATTTCGT 60.035 50.000 0.00 0.00 38.00 3.85
708 724 3.309682 CCACCAGCATATTTCGTAGTGTG 59.690 47.826 0.00 0.00 0.00 3.82
728 744 5.020795 TGTGGCTAATAACCTGTGAGTCTA 58.979 41.667 0.00 0.00 0.00 2.59
783 799 9.853555 CATGTTAATGGTTCTAAAATACAAGCA 57.146 29.630 0.00 0.00 32.42 3.91
787 803 7.624360 AATGGTTCTAAAATACAAGCATCGA 57.376 32.000 0.00 0.00 37.28 3.59
791 807 4.116961 TCTAAAATACAAGCATCGACCGG 58.883 43.478 0.00 0.00 0.00 5.28
799 815 1.141019 GCATCGACCGGTTCTAGCA 59.859 57.895 9.42 0.00 0.00 3.49
812 828 4.212214 CGGTTCTAGCATTATCTTTCTGCC 59.788 45.833 0.00 0.00 36.56 4.85
828 876 4.678509 TCTGCCGTGTGTTGATTAATTC 57.321 40.909 0.00 0.00 0.00 2.17
831 879 3.171277 GCCGTGTGTTGATTAATTCTGC 58.829 45.455 0.00 0.00 0.00 4.26
835 883 5.106555 CCGTGTGTTGATTAATTCTGCTCTT 60.107 40.000 0.00 0.00 0.00 2.85
853 901 7.255491 TGCTCTTATTGCAGATCATACTTTG 57.745 36.000 0.00 0.00 35.31 2.77
891 940 8.034804 AGTATTTGCAAGGTTAAATGATTGACC 58.965 33.333 0.00 3.52 43.69 4.02
914 963 5.404946 CATTTCGCTCAAATCAAGGATGTT 58.595 37.500 0.00 0.00 31.79 2.71
915 964 4.424061 TTCGCTCAAATCAAGGATGTTG 57.576 40.909 0.00 0.00 0.00 3.33
916 965 2.162208 TCGCTCAAATCAAGGATGTTGC 59.838 45.455 0.00 0.00 0.00 4.17
917 966 2.733227 CGCTCAAATCAAGGATGTTGCC 60.733 50.000 0.00 0.00 0.00 4.52
918 967 2.231964 GCTCAAATCAAGGATGTTGCCA 59.768 45.455 0.00 0.00 0.00 4.92
919 968 3.118884 GCTCAAATCAAGGATGTTGCCAT 60.119 43.478 0.00 0.00 0.00 4.40
920 969 4.622220 GCTCAAATCAAGGATGTTGCCATT 60.622 41.667 0.00 0.00 0.00 3.16
921 970 4.823157 TCAAATCAAGGATGTTGCCATTG 58.177 39.130 0.00 0.00 0.00 2.82
922 971 4.283978 TCAAATCAAGGATGTTGCCATTGT 59.716 37.500 0.00 0.00 0.00 2.71
923 972 4.895668 AATCAAGGATGTTGCCATTGTT 57.104 36.364 0.00 0.00 0.00 2.83
924 973 5.999205 AATCAAGGATGTTGCCATTGTTA 57.001 34.783 0.00 0.00 0.00 2.41
925 974 5.999205 ATCAAGGATGTTGCCATTGTTAA 57.001 34.783 0.00 0.00 0.00 2.01
926 975 5.798125 TCAAGGATGTTGCCATTGTTAAA 57.202 34.783 0.00 0.00 0.00 1.52
927 976 6.166984 TCAAGGATGTTGCCATTGTTAAAA 57.833 33.333 0.00 0.00 0.00 1.52
928 977 6.222389 TCAAGGATGTTGCCATTGTTAAAAG 58.778 36.000 0.00 0.00 0.00 2.27
933 982 5.543507 TGTTGCCATTGTTAAAAGGATGT 57.456 34.783 0.00 0.00 0.00 3.06
954 1003 7.981789 GGATGTAGTTTCTTGTCATGATGTCTA 59.018 37.037 0.00 0.00 0.00 2.59
960 1009 5.444663 TCTTGTCATGATGTCTATCCTCG 57.555 43.478 0.00 0.00 32.09 4.63
968 1017 2.437085 TGTCTATCCTCGGCTCAAGA 57.563 50.000 0.00 0.00 0.00 3.02
975 1024 3.802948 TCCTCGGCTCAAGATTCTAAC 57.197 47.619 0.00 0.00 0.00 2.34
985 1034 5.799213 CTCAAGATTCTAACTCAGTTGGGT 58.201 41.667 0.00 0.00 0.00 4.51
991 1040 5.560722 TTCTAACTCAGTTGGGTCATCAA 57.439 39.130 0.00 0.00 0.00 2.57
998 1047 2.969443 GTTGGGTCATCAACGTCAAG 57.031 50.000 0.00 0.00 37.80 3.02
999 1048 1.535462 GTTGGGTCATCAACGTCAAGG 59.465 52.381 0.00 0.00 37.80 3.61
1017 1066 2.566746 AGGATGGACTGGTTGAAGGAT 58.433 47.619 0.00 0.00 0.00 3.24
1023 1072 5.512942 TGGACTGGTTGAAGGATCAATTA 57.487 39.130 0.00 0.00 46.67 1.40
1144 1193 5.607477 TGATGTTTTTGTACCTCTTCTCGT 58.393 37.500 0.00 0.00 0.00 4.18
1212 1261 4.318831 CGGTCAAAAAGGAGAAACTTCGAG 60.319 45.833 0.00 0.00 0.00 4.04
1405 1454 1.649664 GCACACGATCTGCTCTTCAT 58.350 50.000 0.00 0.00 0.00 2.57
1434 1483 0.798776 GGGACTGCAAATGTGTCTCG 59.201 55.000 3.40 0.00 0.00 4.04
1461 1510 2.084546 GGTTGGAAGCATGTAGTCCAC 58.915 52.381 12.09 8.58 41.15 4.02
1626 1675 1.339055 TGCCACTCAAGCATGTCTACC 60.339 52.381 0.00 0.00 34.69 3.18
2142 2191 3.366985 GGCTACATTTCCTTTTGAACCCG 60.367 47.826 0.00 0.00 31.05 5.28
2191 2240 8.580720 CACTAGATCTGTACTTATGGCATAGTT 58.419 37.037 5.18 1.52 0.00 2.24
2244 2299 7.430441 TGCTGTTTTCCTTTATTTACCAGTTC 58.570 34.615 0.00 0.00 0.00 3.01
2279 2334 4.118168 ACCAATTGAAAGGTCACTCCAT 57.882 40.909 7.12 0.00 39.02 3.41
2360 2470 2.302260 TCGTTGCCATTTCCTTTGTGA 58.698 42.857 0.00 0.00 0.00 3.58
2377 2487 9.952030 TCCTTTGTGACTAATGTGATGTATTTA 57.048 29.630 0.00 0.00 0.00 1.40
2505 2615 2.501261 GGTACTGTTGGTTGGGTTCTC 58.499 52.381 0.00 0.00 0.00 2.87
2697 2807 5.363868 CACCATTCTAGACAGATGGAAGGTA 59.636 44.000 23.15 0.00 35.09 3.08
2719 2829 6.036191 GGTAACAGTAGAAGATAAGCAAGCAC 59.964 42.308 0.00 0.00 0.00 4.40
2779 2894 9.629878 ATCTAGGTAGGTATGGATATTTACTCG 57.370 37.037 0.00 0.00 0.00 4.18
2780 2895 6.527057 AGGTAGGTATGGATATTTACTCGC 57.473 41.667 0.00 0.00 0.00 5.03
2781 2896 6.254522 AGGTAGGTATGGATATTTACTCGCT 58.745 40.000 0.00 0.00 0.00 4.93
2782 2897 6.377712 AGGTAGGTATGGATATTTACTCGCTC 59.622 42.308 0.00 0.00 0.00 5.03
2783 2898 6.377712 GGTAGGTATGGATATTTACTCGCTCT 59.622 42.308 0.00 0.00 0.00 4.09
2784 2899 6.919775 AGGTATGGATATTTACTCGCTCTT 57.080 37.500 0.00 0.00 0.00 2.85
2785 2900 7.304497 AGGTATGGATATTTACTCGCTCTTT 57.696 36.000 0.00 0.00 0.00 2.52
2786 2901 7.736893 AGGTATGGATATTTACTCGCTCTTTT 58.263 34.615 0.00 0.00 0.00 2.27
2787 2902 8.211629 AGGTATGGATATTTACTCGCTCTTTTT 58.788 33.333 0.00 0.00 0.00 1.94
2855 2974 9.088987 ACTTATTTTTCCATGTTGACAGGTATT 57.911 29.630 0.00 0.00 0.00 1.89
3007 3144 6.417191 TCTTTCGGTGTCTAAACATATTGC 57.583 37.500 0.00 0.00 37.81 3.56
3012 3149 6.040247 TCGGTGTCTAAACATATTGCTGTAG 58.960 40.000 0.00 0.00 37.81 2.74
3049 3186 1.027357 CAAACAGTGTGCCTTGAGCT 58.973 50.000 0.00 0.00 44.23 4.09
3101 3238 6.408858 ACGCATGTAGTAACATTTCTCTTG 57.591 37.500 0.00 0.00 44.07 3.02
3147 3284 1.748879 GTATGCAAGGGAAGGCGCA 60.749 57.895 10.83 0.00 39.01 6.09
3219 3356 0.820871 AGGTTGACGGAGCTGAGATC 59.179 55.000 0.00 0.00 0.00 2.75
3239 3376 7.504574 TGAGATCGATATACCAGAGGTTTAACA 59.495 37.037 0.00 0.00 37.09 2.41
3243 3380 7.486647 TCGATATACCAGAGGTTTAACAAGAC 58.513 38.462 0.00 0.00 37.09 3.01
3264 3401 7.204496 AGACGAATCTTGCGACTATTATACT 57.796 36.000 0.00 0.00 32.50 2.12
3265 3402 7.299586 AGACGAATCTTGCGACTATTATACTC 58.700 38.462 0.00 0.00 32.50 2.59
3330 3467 0.674581 CAGAAGGCGTCCTCATTGCA 60.675 55.000 0.00 0.00 30.89 4.08
3369 3506 0.890996 GAGGGGTTGACTTGTGGCAG 60.891 60.000 0.00 0.00 0.00 4.85
3478 3615 0.391263 GGGGACACTTCAGGTAAGCG 60.391 60.000 0.00 0.00 38.93 4.68
3480 3617 1.404315 GGGACACTTCAGGTAAGCGAG 60.404 57.143 0.00 0.00 38.93 5.03
3486 3625 2.561419 ACTTCAGGTAAGCGAGCAGTAA 59.439 45.455 0.00 0.00 38.93 2.24
3610 3757 2.366533 TCGATCAAGCTACGGTTCTCT 58.633 47.619 0.00 0.00 0.00 3.10
3613 3760 0.246635 TCAAGCTACGGTTCTCTGCC 59.753 55.000 0.00 0.00 0.00 4.85
3705 3873 1.841556 AGGTCCGGAAACTGCCAGA 60.842 57.895 5.23 0.00 0.00 3.86
3706 3874 1.376037 GGTCCGGAAACTGCCAGAG 60.376 63.158 5.23 0.00 0.00 3.35
3740 3908 3.254166 TGATTTGGAAACTGCTCTGCTTC 59.746 43.478 0.00 0.00 0.00 3.86
3846 4014 1.563173 GTCACGGACGTGCTTGAAC 59.437 57.895 17.54 8.71 45.04 3.18
3857 4025 1.291184 TGCTTGAACATGCCGAGACG 61.291 55.000 9.52 0.00 0.00 4.18
3873 4041 2.152016 AGACGAGTCAAGTGATCACGA 58.848 47.619 19.85 9.62 36.20 4.35
3896 4064 1.521616 GCAGAAGAGAGCCCTCCTG 59.478 63.158 0.00 0.00 40.30 3.86
3930 4098 0.535335 AAGGCTCGCGTAAATCCTCA 59.465 50.000 5.77 0.00 0.00 3.86
3959 4135 4.760047 ACGCCGCGGAGAATTGCT 62.760 61.111 35.95 8.98 0.00 3.91
3999 4175 2.753029 GCAGGAGCACCTTGTCCT 59.247 61.111 0.00 0.00 45.36 3.85
4000 4176 1.376553 GCAGGAGCACCTTGTCCTC 60.377 63.158 0.00 0.00 45.36 3.71
4001 4177 1.079543 CAGGAGCACCTTGTCCTCG 60.080 63.158 0.00 0.00 45.36 4.63
4002 4178 1.228894 AGGAGCACCTTGTCCTCGA 60.229 57.895 0.00 0.00 45.36 4.04
4003 4179 1.079750 GGAGCACCTTGTCCTCGAC 60.080 63.158 0.00 0.00 0.00 4.20
4004 4180 1.444553 GAGCACCTTGTCCTCGACG 60.445 63.158 0.00 0.00 34.95 5.12
4047 4301 4.019771 TGCAAAGGGATATGTACAGTGTGA 60.020 41.667 5.88 0.00 0.00 3.58
4102 4356 1.086634 GCAGTCACGGAATGCCTCTC 61.087 60.000 13.16 0.00 46.03 3.20
4121 4375 0.524392 CGGTGTTGAAGCGTGCAAAA 60.524 50.000 0.00 0.00 44.71 2.44
4170 4427 3.357166 TGCCCACGTTGAAACAATTAC 57.643 42.857 0.00 0.00 0.00 1.89
4171 4428 2.287069 TGCCCACGTTGAAACAATTACG 60.287 45.455 0.00 0.00 39.71 3.18
4179 5345 1.801771 TGAAACAATTACGAGGCACCG 59.198 47.619 0.00 0.00 0.00 4.94
4241 5407 2.747855 CTCCTCCCAGCCAAACGC 60.748 66.667 0.00 0.00 37.98 4.84
4296 5462 4.154347 GCGGCCACCTCCTCTCTG 62.154 72.222 2.24 0.00 0.00 3.35
4297 5463 4.154347 CGGCCACCTCCTCTCTGC 62.154 72.222 2.24 0.00 0.00 4.26
4298 5464 2.686835 GGCCACCTCCTCTCTGCT 60.687 66.667 0.00 0.00 0.00 4.24
4299 5465 2.583520 GCCACCTCCTCTCTGCTG 59.416 66.667 0.00 0.00 0.00 4.41
4300 5466 2.583520 CCACCTCCTCTCTGCTGC 59.416 66.667 0.00 0.00 0.00 5.25
4301 5467 2.183811 CACCTCCTCTCTGCTGCG 59.816 66.667 0.00 0.00 0.00 5.18
4352 5518 1.162698 CTGTCAGACCATTGTGCCTG 58.837 55.000 0.00 0.00 0.00 4.85
4406 5607 1.238439 CAGACCATGGACACAACCAC 58.762 55.000 21.47 0.00 43.03 4.16
4409 5610 2.625823 CCATGGACACAACCACGGC 61.626 63.158 5.56 0.00 43.03 5.68
4421 5622 2.202824 CACGGCCGGCGAAAGATA 60.203 61.111 31.76 0.00 0.00 1.98
4422 5623 2.202837 ACGGCCGGCGAAAGATAC 60.203 61.111 31.76 2.13 0.00 2.24
4423 5624 3.327754 CGGCCGGCGAAAGATACG 61.328 66.667 22.54 12.00 0.00 3.06
4424 5625 2.105528 GGCCGGCGAAAGATACGA 59.894 61.111 22.54 0.00 0.00 3.43
4425 5626 1.949631 GGCCGGCGAAAGATACGAG 60.950 63.158 22.54 0.00 0.00 4.18
4426 5627 2.586773 GCCGGCGAAAGATACGAGC 61.587 63.158 12.58 0.00 0.00 5.03
4427 5628 1.949631 CCGGCGAAAGATACGAGCC 60.950 63.158 9.30 0.00 44.00 4.70
4428 5629 3.614143 GGCGAAAGATACGAGCCG 58.386 61.111 0.00 0.00 38.28 5.52
4429 5630 2.586773 GGCGAAAGATACGAGCCGC 61.587 63.158 0.00 0.00 41.61 6.53
4430 5631 1.876714 GCGAAAGATACGAGCCGCA 60.877 57.895 0.00 0.00 41.89 5.69
4431 5632 1.917921 CGAAAGATACGAGCCGCAC 59.082 57.895 0.00 0.00 0.00 5.34
4432 5633 0.800683 CGAAAGATACGAGCCGCACA 60.801 55.000 0.00 0.00 0.00 4.57
4433 5634 1.571919 GAAAGATACGAGCCGCACAT 58.428 50.000 0.00 0.00 0.00 3.21
4434 5635 1.523095 GAAAGATACGAGCCGCACATC 59.477 52.381 0.00 0.00 0.00 3.06
4435 5636 0.249489 AAGATACGAGCCGCACATCC 60.249 55.000 0.00 0.00 0.00 3.51
4436 5637 1.664965 GATACGAGCCGCACATCCC 60.665 63.158 0.00 0.00 0.00 3.85
4437 5638 3.499929 ATACGAGCCGCACATCCCG 62.500 63.158 0.00 0.00 0.00 5.14
4445 5646 4.520846 GCACATCCCGCGCGAAAG 62.521 66.667 34.63 19.69 0.00 2.62
4458 5659 1.569493 CGAAAGCAAGTCACCACCG 59.431 57.895 0.00 0.00 0.00 4.94
4459 5660 1.282875 GAAAGCAAGTCACCACCGC 59.717 57.895 0.00 0.00 0.00 5.68
4460 5661 1.444119 GAAAGCAAGTCACCACCGCA 61.444 55.000 0.00 0.00 0.00 5.69
4461 5662 0.823356 AAAGCAAGTCACCACCGCAT 60.823 50.000 0.00 0.00 0.00 4.73
4462 5663 0.036164 AAGCAAGTCACCACCGCATA 59.964 50.000 0.00 0.00 0.00 3.14
4463 5664 0.673644 AGCAAGTCACCACCGCATAC 60.674 55.000 0.00 0.00 0.00 2.39
4464 5665 0.953471 GCAAGTCACCACCGCATACA 60.953 55.000 0.00 0.00 0.00 2.29
4465 5666 0.796312 CAAGTCACCACCGCATACAC 59.204 55.000 0.00 0.00 0.00 2.90
4466 5667 0.685097 AAGTCACCACCGCATACACT 59.315 50.000 0.00 0.00 0.00 3.55
4467 5668 1.552578 AGTCACCACCGCATACACTA 58.447 50.000 0.00 0.00 0.00 2.74
4468 5669 1.203994 AGTCACCACCGCATACACTAC 59.796 52.381 0.00 0.00 0.00 2.73
4469 5670 1.067425 GTCACCACCGCATACACTACA 60.067 52.381 0.00 0.00 0.00 2.74
4470 5671 1.067425 TCACCACCGCATACACTACAC 60.067 52.381 0.00 0.00 0.00 2.90
4471 5672 0.970640 ACCACCGCATACACTACACA 59.029 50.000 0.00 0.00 0.00 3.72
4472 5673 1.067142 ACCACCGCATACACTACACAG 60.067 52.381 0.00 0.00 0.00 3.66
4473 5674 1.203758 CCACCGCATACACTACACAGA 59.796 52.381 0.00 0.00 0.00 3.41
4474 5675 2.530177 CACCGCATACACTACACAGAG 58.470 52.381 0.00 0.00 0.00 3.35
4475 5676 1.135083 ACCGCATACACTACACAGAGC 60.135 52.381 0.00 0.00 0.00 4.09
4476 5677 1.191944 CGCATACACTACACAGAGCG 58.808 55.000 0.00 0.00 37.91 5.03
4477 5678 0.924090 GCATACACTACACAGAGCGC 59.076 55.000 0.00 0.00 0.00 5.92
4478 5679 1.191944 CATACACTACACAGAGCGCG 58.808 55.000 0.00 0.00 0.00 6.86
4479 5680 0.100682 ATACACTACACAGAGCGCGG 59.899 55.000 8.83 0.00 0.00 6.46
4480 5681 2.537792 TACACTACACAGAGCGCGGC 62.538 60.000 8.83 0.00 0.00 6.53
4481 5682 4.436998 ACTACACAGAGCGCGGCC 62.437 66.667 8.83 0.00 0.00 6.13
4493 5694 3.330853 GCGGCCGCACGAGAATAG 61.331 66.667 43.55 2.91 41.49 1.73
4494 5695 2.658593 CGGCCGCACGAGAATAGG 60.659 66.667 14.67 0.00 35.47 2.57
4495 5696 2.967615 GGCCGCACGAGAATAGGC 60.968 66.667 0.00 0.00 46.51 3.93
4496 5697 2.967615 GCCGCACGAGAATAGGCC 60.968 66.667 0.00 0.00 41.81 5.19
4497 5698 2.499205 CCGCACGAGAATAGGCCA 59.501 61.111 5.01 0.00 0.00 5.36
4498 5699 1.592669 CCGCACGAGAATAGGCCAG 60.593 63.158 5.01 0.00 0.00 4.85
4499 5700 2.240500 CGCACGAGAATAGGCCAGC 61.241 63.158 5.01 0.00 0.00 4.85
4500 5701 1.153369 GCACGAGAATAGGCCAGCA 60.153 57.895 5.01 0.00 0.00 4.41
4501 5702 0.533755 GCACGAGAATAGGCCAGCAT 60.534 55.000 5.01 0.00 0.00 3.79
4502 5703 1.224075 CACGAGAATAGGCCAGCATG 58.776 55.000 5.01 0.00 0.00 4.06
4503 5704 1.123077 ACGAGAATAGGCCAGCATGA 58.877 50.000 5.01 0.00 39.69 3.07
4504 5705 1.486310 ACGAGAATAGGCCAGCATGAA 59.514 47.619 5.01 0.00 39.69 2.57
4505 5706 1.869767 CGAGAATAGGCCAGCATGAAC 59.130 52.381 5.01 0.00 39.69 3.18
4506 5707 2.225467 GAGAATAGGCCAGCATGAACC 58.775 52.381 5.01 0.00 39.69 3.62
4507 5708 1.133668 AGAATAGGCCAGCATGAACCC 60.134 52.381 5.01 0.00 39.69 4.11
4508 5709 0.630673 AATAGGCCAGCATGAACCCA 59.369 50.000 5.01 0.00 39.69 4.51
4509 5710 0.184451 ATAGGCCAGCATGAACCCAG 59.816 55.000 5.01 0.00 39.69 4.45
4510 5711 0.913934 TAGGCCAGCATGAACCCAGA 60.914 55.000 5.01 0.00 39.69 3.86
4511 5712 2.048603 GGCCAGCATGAACCCAGAC 61.049 63.158 0.00 0.00 39.69 3.51
4512 5713 2.401766 GCCAGCATGAACCCAGACG 61.402 63.158 0.00 0.00 39.69 4.18
4513 5714 1.296392 CCAGCATGAACCCAGACGA 59.704 57.895 0.00 0.00 39.69 4.20
4514 5715 0.742281 CCAGCATGAACCCAGACGAG 60.742 60.000 0.00 0.00 39.69 4.18
4515 5716 0.742281 CAGCATGAACCCAGACGAGG 60.742 60.000 0.00 0.00 39.69 4.63
4516 5717 2.109126 GCATGAACCCAGACGAGGC 61.109 63.158 0.00 0.00 0.00 4.70
4517 5718 1.450312 CATGAACCCAGACGAGGCC 60.450 63.158 0.00 0.00 0.00 5.19
4518 5719 2.670148 ATGAACCCAGACGAGGCCC 61.670 63.158 0.00 0.00 0.00 5.80
4519 5720 4.097361 GAACCCAGACGAGGCCCC 62.097 72.222 0.00 0.00 0.00 5.80
4520 5721 4.658786 AACCCAGACGAGGCCCCT 62.659 66.667 0.00 0.00 0.00 4.79
4524 5725 2.765807 CAGACGAGGCCCCTGGAT 60.766 66.667 0.00 0.00 0.00 3.41
4525 5726 1.457643 CAGACGAGGCCCCTGGATA 60.458 63.158 0.00 0.00 0.00 2.59
4526 5727 1.152440 AGACGAGGCCCCTGGATAG 60.152 63.158 0.00 0.00 0.00 2.08
4527 5728 2.844839 ACGAGGCCCCTGGATAGC 60.845 66.667 0.00 0.00 0.00 2.97
4531 5732 3.253061 GGCCCCTGGATAGCCTCC 61.253 72.222 13.20 0.00 43.62 4.30
4538 5739 2.844839 GGATAGCCTCCACCGCCT 60.845 66.667 0.00 0.00 44.26 5.52
4539 5740 1.533273 GGATAGCCTCCACCGCCTA 60.533 63.158 0.00 0.00 44.26 3.93
4540 5741 1.119574 GGATAGCCTCCACCGCCTAA 61.120 60.000 0.00 0.00 44.26 2.69
4541 5742 0.318762 GATAGCCTCCACCGCCTAAG 59.681 60.000 0.00 0.00 0.00 2.18
4542 5743 0.105658 ATAGCCTCCACCGCCTAAGA 60.106 55.000 0.00 0.00 0.00 2.10
4543 5744 1.041447 TAGCCTCCACCGCCTAAGAC 61.041 60.000 0.00 0.00 0.00 3.01
4544 5745 2.656069 GCCTCCACCGCCTAAGACA 61.656 63.158 0.00 0.00 0.00 3.41
4545 5746 1.517832 CCTCCACCGCCTAAGACAG 59.482 63.158 0.00 0.00 0.00 3.51
4553 5754 3.399181 CCTAAGACAGGCCCGCCA 61.399 66.667 8.74 0.00 37.70 5.69
4554 5755 2.125106 CTAAGACAGGCCCGCCAC 60.125 66.667 8.74 0.00 38.92 5.01
4555 5756 3.682292 CTAAGACAGGCCCGCCACC 62.682 68.421 8.74 0.00 38.92 4.61
4567 5768 4.704833 GCCACCCAAGCGCAGAGA 62.705 66.667 11.47 0.00 0.00 3.10
4568 5769 2.270205 CCACCCAAGCGCAGAGAT 59.730 61.111 11.47 0.00 0.00 2.75
4569 5770 1.817099 CCACCCAAGCGCAGAGATC 60.817 63.158 11.47 0.00 0.00 2.75
4570 5771 1.817099 CACCCAAGCGCAGAGATCC 60.817 63.158 11.47 0.00 0.00 3.36
4571 5772 2.587194 CCCAAGCGCAGAGATCCG 60.587 66.667 11.47 0.00 0.00 4.18
4579 5780 4.933064 CAGAGATCCGCCCGCGTC 62.933 72.222 4.92 0.00 37.81 5.19
4603 5804 1.698506 CGATAGGAGAAGCCTCACCT 58.301 55.000 6.54 6.54 46.97 4.00
4604 5805 1.611491 CGATAGGAGAAGCCTCACCTC 59.389 57.143 4.39 0.00 46.97 3.85
4605 5806 2.751479 CGATAGGAGAAGCCTCACCTCT 60.751 54.545 4.39 0.00 46.97 3.69
4606 5807 2.151502 TAGGAGAAGCCTCACCTCTG 57.848 55.000 4.39 0.00 46.97 3.35
4607 5808 1.220477 GGAGAAGCCTCACCTCTGC 59.780 63.158 0.00 0.00 41.20 4.26
4608 5809 1.220477 GAGAAGCCTCACCTCTGCC 59.780 63.158 0.00 0.00 39.24 4.85
4609 5810 2.125350 GAAGCCTCACCTCTGCCG 60.125 66.667 0.00 0.00 0.00 5.69
4610 5811 2.925170 AAGCCTCACCTCTGCCGT 60.925 61.111 0.00 0.00 0.00 5.68
4611 5812 2.844072 GAAGCCTCACCTCTGCCGTC 62.844 65.000 0.00 0.00 0.00 4.79
4612 5813 4.459089 GCCTCACCTCTGCCGTCC 62.459 72.222 0.00 0.00 0.00 4.79
4613 5814 4.135153 CCTCACCTCTGCCGTCCG 62.135 72.222 0.00 0.00 0.00 4.79
4614 5815 3.374402 CTCACCTCTGCCGTCCGT 61.374 66.667 0.00 0.00 0.00 4.69
4615 5816 3.343788 CTCACCTCTGCCGTCCGTC 62.344 68.421 0.00 0.00 0.00 4.79
4616 5817 4.778415 CACCTCTGCCGTCCGTCG 62.778 72.222 0.00 0.00 39.52 5.12
4629 5830 3.484547 CGTCGCACGGGTTAAGCC 61.485 66.667 13.92 13.92 38.08 4.35
4639 5840 3.583086 GTTAAGCCCGGCCGCATC 61.583 66.667 22.85 10.71 0.00 3.91
4640 5841 4.102815 TTAAGCCCGGCCGCATCA 62.103 61.111 22.85 0.00 0.00 3.07
4641 5842 3.630298 TTAAGCCCGGCCGCATCAA 62.630 57.895 22.85 6.47 0.00 2.57
4648 5849 2.892425 GGCCGCATCAACCGAGAG 60.892 66.667 0.00 0.00 0.00 3.20
4649 5850 3.567797 GCCGCATCAACCGAGAGC 61.568 66.667 0.00 0.00 0.00 4.09
4650 5851 2.125552 CCGCATCAACCGAGAGCA 60.126 61.111 0.00 0.00 0.00 4.26
4651 5852 2.169789 CCGCATCAACCGAGAGCAG 61.170 63.158 0.00 0.00 0.00 4.24
4652 5853 2.806856 CGCATCAACCGAGAGCAGC 61.807 63.158 0.00 0.00 0.00 5.25
4653 5854 2.806856 GCATCAACCGAGAGCAGCG 61.807 63.158 0.00 0.00 0.00 5.18
4654 5855 1.153765 CATCAACCGAGAGCAGCGA 60.154 57.895 0.00 0.00 0.00 4.93
4655 5856 1.140589 ATCAACCGAGAGCAGCGAG 59.859 57.895 0.00 0.00 0.00 5.03
4656 5857 2.290122 ATCAACCGAGAGCAGCGAGG 62.290 60.000 0.00 0.00 0.00 4.63
4657 5858 3.764466 AACCGAGAGCAGCGAGGG 61.764 66.667 0.00 0.00 0.00 4.30
4660 5861 3.452786 CGAGAGCAGCGAGGGGAA 61.453 66.667 0.00 0.00 0.00 3.97
4661 5862 2.790791 CGAGAGCAGCGAGGGGAAT 61.791 63.158 0.00 0.00 0.00 3.01
4662 5863 1.227497 GAGAGCAGCGAGGGGAATG 60.227 63.158 0.00 0.00 0.00 2.67
4663 5864 2.203126 GAGCAGCGAGGGGAATGG 60.203 66.667 0.00 0.00 0.00 3.16
4664 5865 3.764160 GAGCAGCGAGGGGAATGGG 62.764 68.421 0.00 0.00 0.00 4.00
4665 5866 4.115199 GCAGCGAGGGGAATGGGT 62.115 66.667 0.00 0.00 0.00 4.51
4666 5867 2.190578 CAGCGAGGGGAATGGGTC 59.809 66.667 0.00 0.00 0.00 4.46
4667 5868 3.470888 AGCGAGGGGAATGGGTCG 61.471 66.667 0.00 0.00 35.51 4.79
4669 5870 3.781307 CGAGGGGAATGGGTCGCA 61.781 66.667 0.00 0.00 40.96 5.10
4670 5871 2.124695 GAGGGGAATGGGTCGCAC 60.125 66.667 0.00 0.00 40.96 5.34
4671 5872 4.096003 AGGGGAATGGGTCGCACG 62.096 66.667 0.00 0.00 40.96 5.34
4674 5875 4.404098 GGAATGGGTCGCACGGGT 62.404 66.667 0.00 0.00 0.00 5.28
4675 5876 2.359478 GAATGGGTCGCACGGGTT 60.359 61.111 0.00 0.00 0.00 4.11
4676 5877 1.078988 GAATGGGTCGCACGGGTTA 60.079 57.895 0.00 0.00 0.00 2.85
4677 5878 0.674269 GAATGGGTCGCACGGGTTAA 60.674 55.000 0.00 0.00 0.00 2.01
4678 5879 0.675522 AATGGGTCGCACGGGTTAAG 60.676 55.000 0.00 0.00 0.00 1.85
4679 5880 3.122971 GGGTCGCACGGGTTAAGC 61.123 66.667 0.00 0.00 0.00 3.09
4680 5881 3.122971 GGTCGCACGGGTTAAGCC 61.123 66.667 13.92 13.92 0.00 4.35
4690 5891 3.583086 GTTAAGCCCGGCCGCATC 61.583 66.667 22.85 10.71 0.00 3.91
4691 5892 4.102815 TTAAGCCCGGCCGCATCA 62.103 61.111 22.85 0.00 0.00 3.07
4692 5893 3.630298 TTAAGCCCGGCCGCATCAA 62.630 57.895 22.85 6.47 0.00 2.57
4699 5900 3.499737 GGCCGCATCAACCGACAG 61.500 66.667 0.00 0.00 0.00 3.51
4700 5901 4.166011 GCCGCATCAACCGACAGC 62.166 66.667 0.00 0.00 0.00 4.40
4701 5902 2.741985 CCGCATCAACCGACAGCA 60.742 61.111 0.00 0.00 0.00 4.41
4702 5903 2.743752 CCGCATCAACCGACAGCAG 61.744 63.158 0.00 0.00 0.00 4.24
4703 5904 2.482374 GCATCAACCGACAGCAGC 59.518 61.111 0.00 0.00 0.00 5.25
4704 5905 2.780643 CATCAACCGACAGCAGCG 59.219 61.111 0.00 0.00 0.00 5.18
4705 5906 1.737735 CATCAACCGACAGCAGCGA 60.738 57.895 0.00 0.00 0.00 4.93
4706 5907 1.446792 ATCAACCGACAGCAGCGAG 60.447 57.895 0.00 0.00 0.00 5.03
4707 5908 2.842394 ATCAACCGACAGCAGCGAGG 62.842 60.000 0.00 0.00 0.00 4.63
4708 5909 4.379243 AACCGACAGCAGCGAGGG 62.379 66.667 0.00 0.00 0.00 4.30
4711 5912 4.069232 CGACAGCAGCGAGGGGAA 62.069 66.667 0.00 0.00 0.00 3.97
4712 5913 2.586792 GACAGCAGCGAGGGGAAT 59.413 61.111 0.00 0.00 0.00 3.01
4713 5914 1.817099 GACAGCAGCGAGGGGAATG 60.817 63.158 0.00 0.00 0.00 2.67
4714 5915 2.515523 CAGCAGCGAGGGGAATGG 60.516 66.667 0.00 0.00 0.00 3.16
4715 5916 3.801997 AGCAGCGAGGGGAATGGG 61.802 66.667 0.00 0.00 0.00 4.00
4716 5917 4.115199 GCAGCGAGGGGAATGGGT 62.115 66.667 0.00 0.00 0.00 4.51
4717 5918 2.124570 CAGCGAGGGGAATGGGTG 60.125 66.667 0.00 0.00 0.00 4.61
4718 5919 3.411517 AGCGAGGGGAATGGGTGG 61.412 66.667 0.00 0.00 0.00 4.61
4719 5920 3.407967 GCGAGGGGAATGGGTGGA 61.408 66.667 0.00 0.00 0.00 4.02
4720 5921 2.590092 CGAGGGGAATGGGTGGAC 59.410 66.667 0.00 0.00 0.00 4.02
4721 5922 2.297895 CGAGGGGAATGGGTGGACA 61.298 63.158 0.00 0.00 0.00 4.02
4722 5923 1.609783 GAGGGGAATGGGTGGACAG 59.390 63.158 0.00 0.00 0.00 3.51
4723 5924 1.926426 GAGGGGAATGGGTGGACAGG 61.926 65.000 0.00 0.00 0.00 4.00
4724 5925 1.928567 GGGGAATGGGTGGACAGGA 60.929 63.158 0.00 0.00 0.00 3.86
4725 5926 1.609783 GGGAATGGGTGGACAGGAG 59.390 63.158 0.00 0.00 0.00 3.69
4726 5927 1.609783 GGAATGGGTGGACAGGAGG 59.390 63.158 0.00 0.00 0.00 4.30
4727 5928 1.609783 GAATGGGTGGACAGGAGGG 59.390 63.158 0.00 0.00 0.00 4.30
4728 5929 0.914417 GAATGGGTGGACAGGAGGGA 60.914 60.000 0.00 0.00 0.00 4.20
4729 5930 0.916358 AATGGGTGGACAGGAGGGAG 60.916 60.000 0.00 0.00 0.00 4.30
4730 5931 2.122954 GGGTGGACAGGAGGGAGT 59.877 66.667 0.00 0.00 0.00 3.85
4731 5932 1.990614 GGGTGGACAGGAGGGAGTC 60.991 68.421 0.00 0.00 0.00 3.36
4743 5944 3.519930 GGAGTCCTCCTCGTCGCC 61.520 72.222 0.41 0.00 46.16 5.54
4744 5945 2.438795 GAGTCCTCCTCGTCGCCT 60.439 66.667 0.00 0.00 0.00 5.52
4745 5946 2.035940 AGTCCTCCTCGTCGCCTT 59.964 61.111 0.00 0.00 0.00 4.35
4746 5947 1.995646 GAGTCCTCCTCGTCGCCTTC 61.996 65.000 0.00 0.00 0.00 3.46
4747 5948 2.035155 TCCTCCTCGTCGCCTTCA 59.965 61.111 0.00 0.00 0.00 3.02
4748 5949 2.046864 TCCTCCTCGTCGCCTTCAG 61.047 63.158 0.00 0.00 0.00 3.02
4749 5950 2.202676 CTCCTCGTCGCCTTCAGC 60.203 66.667 0.00 0.00 38.52 4.26
4758 5959 3.741476 GCCTTCAGCGCCACCAAG 61.741 66.667 2.29 0.57 0.00 3.61
4759 5960 3.741476 CCTTCAGCGCCACCAAGC 61.741 66.667 2.29 0.00 0.00 4.01
4807 6008 2.363147 GGCCGGCCCATTAAACCA 60.363 61.111 36.64 0.00 0.00 3.67
4808 6009 1.760480 GGCCGGCCCATTAAACCAT 60.760 57.895 36.64 0.00 0.00 3.55
4809 6010 1.739667 GCCGGCCCATTAAACCATC 59.260 57.895 18.11 0.00 0.00 3.51
4810 6011 2.029743 CCGGCCCATTAAACCATCG 58.970 57.895 0.00 0.00 0.00 3.84
4811 6012 1.358759 CGGCCCATTAAACCATCGC 59.641 57.895 0.00 0.00 0.00 4.58
4812 6013 1.101049 CGGCCCATTAAACCATCGCT 61.101 55.000 0.00 0.00 0.00 4.93
4813 6014 1.812324 CGGCCCATTAAACCATCGCTA 60.812 52.381 0.00 0.00 0.00 4.26
4814 6015 1.607148 GGCCCATTAAACCATCGCTAC 59.393 52.381 0.00 0.00 0.00 3.58
4815 6016 1.607148 GCCCATTAAACCATCGCTACC 59.393 52.381 0.00 0.00 0.00 3.18
4816 6017 2.748465 GCCCATTAAACCATCGCTACCT 60.748 50.000 0.00 0.00 0.00 3.08
4817 6018 3.551846 CCCATTAAACCATCGCTACCTT 58.448 45.455 0.00 0.00 0.00 3.50
4818 6019 3.951680 CCCATTAAACCATCGCTACCTTT 59.048 43.478 0.00 0.00 0.00 3.11
4819 6020 4.401202 CCCATTAAACCATCGCTACCTTTT 59.599 41.667 0.00 0.00 0.00 2.27
4820 6021 5.449999 CCCATTAAACCATCGCTACCTTTTC 60.450 44.000 0.00 0.00 0.00 2.29
4821 6022 5.357032 CCATTAAACCATCGCTACCTTTTCT 59.643 40.000 0.00 0.00 0.00 2.52
4822 6023 6.127730 CCATTAAACCATCGCTACCTTTTCTT 60.128 38.462 0.00 0.00 0.00 2.52
4823 6024 6.887626 TTAAACCATCGCTACCTTTTCTTT 57.112 33.333 0.00 0.00 0.00 2.52
4824 6025 4.766404 AACCATCGCTACCTTTTCTTTG 57.234 40.909 0.00 0.00 0.00 2.77
4825 6026 3.081804 ACCATCGCTACCTTTTCTTTGG 58.918 45.455 0.00 0.00 0.00 3.28
4826 6027 2.159379 CCATCGCTACCTTTTCTTTGGC 60.159 50.000 0.00 0.00 0.00 4.52
4827 6028 2.561478 TCGCTACCTTTTCTTTGGCT 57.439 45.000 0.00 0.00 0.00 4.75
4828 6029 2.423577 TCGCTACCTTTTCTTTGGCTC 58.576 47.619 0.00 0.00 0.00 4.70
4829 6030 1.468914 CGCTACCTTTTCTTTGGCTCC 59.531 52.381 0.00 0.00 0.00 4.70
4830 6031 1.819288 GCTACCTTTTCTTTGGCTCCC 59.181 52.381 0.00 0.00 0.00 4.30
4831 6032 2.084546 CTACCTTTTCTTTGGCTCCCG 58.915 52.381 0.00 0.00 0.00 5.14
4832 6033 1.179174 ACCTTTTCTTTGGCTCCCGC 61.179 55.000 0.00 0.00 0.00 6.13
4833 6034 0.895559 CCTTTTCTTTGGCTCCCGCT 60.896 55.000 0.00 0.00 36.09 5.52
4834 6035 0.242017 CTTTTCTTTGGCTCCCGCTG 59.758 55.000 0.00 0.00 36.09 5.18
4835 6036 1.178534 TTTTCTTTGGCTCCCGCTGG 61.179 55.000 0.00 0.00 36.09 4.85
4836 6037 2.063015 TTTCTTTGGCTCCCGCTGGA 62.063 55.000 0.00 0.00 38.75 3.86
4837 6038 1.852157 TTCTTTGGCTCCCGCTGGAT 61.852 55.000 0.00 0.00 40.80 3.41
4838 6039 1.821332 CTTTGGCTCCCGCTGGATC 60.821 63.158 0.00 0.00 40.80 3.36
4839 6040 3.680620 TTTGGCTCCCGCTGGATCG 62.681 63.158 0.00 0.00 40.80 3.69
4842 6043 3.606662 GCTCCCGCTGGATCGCTA 61.607 66.667 0.00 0.00 40.80 4.26
4843 6044 2.647875 CTCCCGCTGGATCGCTAG 59.352 66.667 0.00 0.00 40.80 3.42
4844 6045 2.123854 TCCCGCTGGATCGCTAGT 60.124 61.111 0.00 0.00 35.03 2.57
4845 6046 2.136196 CTCCCGCTGGATCGCTAGTC 62.136 65.000 0.00 0.00 40.80 2.59
4846 6047 2.336809 CCGCTGGATCGCTAGTCC 59.663 66.667 0.00 0.00 36.26 3.85
4847 6048 2.336809 CGCTGGATCGCTAGTCCC 59.663 66.667 0.00 0.00 34.76 4.46
4848 6049 2.490148 CGCTGGATCGCTAGTCCCA 61.490 63.158 0.00 0.00 34.76 4.37
4849 6050 1.365633 GCTGGATCGCTAGTCCCAG 59.634 63.158 13.75 13.75 46.67 4.45
4850 6051 1.365633 CTGGATCGCTAGTCCCAGC 59.634 63.158 0.00 0.00 39.59 4.85
4851 6052 1.075970 TGGATCGCTAGTCCCAGCT 60.076 57.895 0.00 0.00 39.51 4.24
4852 6053 1.109920 TGGATCGCTAGTCCCAGCTC 61.110 60.000 0.00 0.00 39.51 4.09
4853 6054 1.284408 GATCGCTAGTCCCAGCTCG 59.716 63.158 0.00 0.00 39.51 5.03
4854 6055 1.152943 ATCGCTAGTCCCAGCTCGA 60.153 57.895 0.00 0.00 39.51 4.04
4855 6056 0.538516 ATCGCTAGTCCCAGCTCGAT 60.539 55.000 0.00 0.00 39.51 3.59
4856 6057 1.167155 TCGCTAGTCCCAGCTCGATC 61.167 60.000 0.00 0.00 39.51 3.69
4857 6058 1.448119 CGCTAGTCCCAGCTCGATCA 61.448 60.000 0.00 0.00 39.51 2.92
4858 6059 0.965439 GCTAGTCCCAGCTCGATCAT 59.035 55.000 0.00 0.00 38.57 2.45
4859 6060 1.342819 GCTAGTCCCAGCTCGATCATT 59.657 52.381 0.00 0.00 38.57 2.57
4860 6061 2.224161 GCTAGTCCCAGCTCGATCATTT 60.224 50.000 0.00 0.00 38.57 2.32
4861 6062 3.742640 GCTAGTCCCAGCTCGATCATTTT 60.743 47.826 0.00 0.00 38.57 1.82
4862 6063 3.356529 AGTCCCAGCTCGATCATTTTT 57.643 42.857 0.00 0.00 0.00 1.94
4881 6082 2.774439 TTTCTCTCGCCAAAAACTGC 57.226 45.000 0.00 0.00 0.00 4.40
4882 6083 1.967319 TTCTCTCGCCAAAAACTGCT 58.033 45.000 0.00 0.00 0.00 4.24
4883 6084 2.831685 TCTCTCGCCAAAAACTGCTA 57.168 45.000 0.00 0.00 0.00 3.49
4884 6085 2.413837 TCTCTCGCCAAAAACTGCTAC 58.586 47.619 0.00 0.00 0.00 3.58
4885 6086 2.143122 CTCTCGCCAAAAACTGCTACA 58.857 47.619 0.00 0.00 0.00 2.74
4886 6087 2.744202 CTCTCGCCAAAAACTGCTACAT 59.256 45.455 0.00 0.00 0.00 2.29
4887 6088 3.146066 TCTCGCCAAAAACTGCTACATT 58.854 40.909 0.00 0.00 0.00 2.71
4888 6089 4.320023 TCTCGCCAAAAACTGCTACATTA 58.680 39.130 0.00 0.00 0.00 1.90
4889 6090 4.391830 TCTCGCCAAAAACTGCTACATTAG 59.608 41.667 0.00 0.00 0.00 1.73
4890 6091 3.438781 TCGCCAAAAACTGCTACATTAGG 59.561 43.478 0.00 0.00 0.00 2.69
4891 6092 3.190535 CGCCAAAAACTGCTACATTAGGT 59.809 43.478 0.00 0.00 0.00 3.08
4892 6093 4.393680 CGCCAAAAACTGCTACATTAGGTA 59.606 41.667 0.00 0.00 0.00 3.08
4893 6094 5.637809 GCCAAAAACTGCTACATTAGGTAC 58.362 41.667 0.00 0.00 0.00 3.34
4894 6095 5.414765 GCCAAAAACTGCTACATTAGGTACT 59.585 40.000 0.00 0.00 46.37 2.73
4895 6096 6.622896 GCCAAAAACTGCTACATTAGGTACTG 60.623 42.308 0.00 0.00 41.52 2.74
4896 6097 6.653320 CCAAAAACTGCTACATTAGGTACTGA 59.347 38.462 0.00 0.00 41.52 3.41
4897 6098 7.336931 CCAAAAACTGCTACATTAGGTACTGAT 59.663 37.037 0.00 0.00 41.52 2.90
4898 6099 8.730680 CAAAAACTGCTACATTAGGTACTGATT 58.269 33.333 0.00 0.00 41.52 2.57
4899 6100 8.863872 AAAACTGCTACATTAGGTACTGATTT 57.136 30.769 0.00 0.00 41.52 2.17
4900 6101 8.863872 AAACTGCTACATTAGGTACTGATTTT 57.136 30.769 0.00 0.00 41.52 1.82
4901 6102 8.494016 AACTGCTACATTAGGTACTGATTTTC 57.506 34.615 0.00 0.00 41.52 2.29
4902 6103 7.852263 ACTGCTACATTAGGTACTGATTTTCT 58.148 34.615 0.00 0.00 41.52 2.52
4903 6104 8.322091 ACTGCTACATTAGGTACTGATTTTCTT 58.678 33.333 0.00 0.00 41.52 2.52
4904 6105 9.817809 CTGCTACATTAGGTACTGATTTTCTTA 57.182 33.333 0.00 0.00 41.52 2.10
4905 6106 9.817809 TGCTACATTAGGTACTGATTTTCTTAG 57.182 33.333 0.00 0.00 41.52 2.18
4913 6114 8.405418 AGGTACTGATTTTCTTAGAAAAACCC 57.595 34.615 23.62 17.16 37.18 4.11
4914 6115 8.002459 AGGTACTGATTTTCTTAGAAAAACCCA 58.998 33.333 23.62 19.07 37.18 4.51
4915 6116 8.635328 GGTACTGATTTTCTTAGAAAAACCCAA 58.365 33.333 21.71 7.43 31.35 4.12
4916 6117 9.459640 GTACTGATTTTCTTAGAAAAACCCAAC 57.540 33.333 21.71 14.13 31.35 3.77
4917 6118 7.497595 ACTGATTTTCTTAGAAAAACCCAACC 58.502 34.615 21.71 7.88 31.35 3.77
4918 6119 6.508777 TGATTTTCTTAGAAAAACCCAACCG 58.491 36.000 21.71 0.00 31.35 4.44
4919 6120 4.922471 TTTCTTAGAAAAACCCAACCGG 57.078 40.909 4.77 0.00 37.81 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 128 7.386025 CAGAAATTGAGGAGAAAATTGGAAACC 59.614 37.037 0.00 0.00 0.00 3.27
207 208 9.720769 TTCCTAGTTCCACTCTTTAACTAATTG 57.279 33.333 0.00 0.00 35.79 2.32
240 242 7.121168 CCAAATCACCTTGTATCAGTGTAACAT 59.879 37.037 1.99 0.00 41.43 2.71
286 288 4.386049 CGAGTGTGGAGTACAGATTGAAAC 59.614 45.833 0.00 0.00 40.69 2.78
430 433 5.028549 ACATGTCTATGTCAAGGGATCAC 57.971 43.478 0.00 0.00 44.00 3.06
477 492 5.788055 ACGATATTTACAAATGCACGTCA 57.212 34.783 0.00 0.00 32.29 4.35
498 513 6.905578 AGAACAATTTAACCACGGACATTAC 58.094 36.000 0.00 0.00 0.00 1.89
502 517 4.710324 AGAGAACAATTTAACCACGGACA 58.290 39.130 0.00 0.00 0.00 4.02
505 520 6.649557 AGACTAAGAGAACAATTTAACCACGG 59.350 38.462 0.00 0.00 0.00 4.94
506 521 7.653767 AGACTAAGAGAACAATTTAACCACG 57.346 36.000 0.00 0.00 0.00 4.94
535 550 4.768448 GGGGATAACCTCCTTTTCGAAAAA 59.232 41.667 22.67 9.49 44.28 1.94
536 551 4.338012 GGGGATAACCTCCTTTTCGAAAA 58.662 43.478 21.35 21.35 44.28 2.29
537 552 3.959293 GGGGATAACCTCCTTTTCGAAA 58.041 45.455 6.47 6.47 44.28 3.46
538 553 3.639672 GGGGATAACCTCCTTTTCGAA 57.360 47.619 0.00 0.00 44.28 3.71
547 562 2.447959 AGGCCGGGGGATAACCTC 60.448 66.667 2.18 0.00 40.03 3.85
548 563 2.447959 GAGGCCGGGGGATAACCT 60.448 66.667 2.18 0.00 40.03 3.50
549 564 2.447959 AGAGGCCGGGGGATAACC 60.448 66.667 2.18 0.00 39.11 2.85
550 565 2.829592 CAGAGGCCGGGGGATAAC 59.170 66.667 2.18 0.00 0.00 1.89
551 566 3.168528 GCAGAGGCCGGGGGATAA 61.169 66.667 2.18 0.00 0.00 1.75
552 567 3.792325 ATGCAGAGGCCGGGGGATA 62.792 63.158 2.18 0.00 40.13 2.59
556 571 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
557 572 2.335092 ATTCTGATGCAGAGGCCGGG 62.335 60.000 2.18 0.00 41.75 5.73
558 573 1.147824 ATTCTGATGCAGAGGCCGG 59.852 57.895 0.00 0.00 41.75 6.13
559 574 0.179065 TCATTCTGATGCAGAGGCCG 60.179 55.000 0.00 0.00 41.75 6.13
560 575 1.880675 CATCATTCTGATGCAGAGGCC 59.119 52.381 0.00 0.00 46.37 5.19
569 584 0.596577 GCCGCATGCATCATTCTGAT 59.403 50.000 19.57 0.00 37.65 2.90
570 585 1.449726 GGCCGCATGCATCATTCTGA 61.450 55.000 19.57 0.00 43.89 3.27
571 586 1.007734 GGCCGCATGCATCATTCTG 60.008 57.895 19.57 0.00 43.89 3.02
572 587 0.826256 ATGGCCGCATGCATCATTCT 60.826 50.000 19.57 0.00 43.89 2.40
573 588 0.666274 CATGGCCGCATGCATCATTC 60.666 55.000 19.57 1.17 43.89 2.67
574 589 1.365999 CATGGCCGCATGCATCATT 59.634 52.632 19.57 0.00 43.89 2.57
575 590 1.802337 GACATGGCCGCATGCATCAT 61.802 55.000 19.57 14.21 43.89 2.45
576 591 2.440613 ACATGGCCGCATGCATCA 60.441 55.556 19.57 12.47 43.89 3.07
577 592 1.731433 AAGACATGGCCGCATGCATC 61.731 55.000 19.57 8.10 43.89 3.91
578 593 0.466007 TAAGACATGGCCGCATGCAT 60.466 50.000 19.57 0.00 43.89 3.96
579 594 1.077858 TAAGACATGGCCGCATGCA 60.078 52.632 19.57 0.00 43.89 3.96
580 595 1.097547 AGTAAGACATGGCCGCATGC 61.098 55.000 7.91 7.91 36.08 4.06
581 596 0.940126 GAGTAAGACATGGCCGCATG 59.060 55.000 0.00 0.00 38.46 4.06
582 597 0.833287 AGAGTAAGACATGGCCGCAT 59.167 50.000 0.00 0.00 0.00 4.73
583 598 1.480789 TAGAGTAAGACATGGCCGCA 58.519 50.000 0.00 0.00 0.00 5.69
584 599 2.596904 TTAGAGTAAGACATGGCCGC 57.403 50.000 0.00 0.00 0.00 6.53
585 600 2.866762 GCTTTAGAGTAAGACATGGCCG 59.133 50.000 0.00 0.00 0.00 6.13
586 601 3.873910 TGCTTTAGAGTAAGACATGGCC 58.126 45.455 0.00 0.00 0.00 5.36
587 602 5.819901 AGAATGCTTTAGAGTAAGACATGGC 59.180 40.000 0.00 0.00 0.00 4.40
588 603 7.856145 AAGAATGCTTTAGAGTAAGACATGG 57.144 36.000 0.00 0.00 0.00 3.66
591 606 9.998106 ACTAAAAGAATGCTTTAGAGTAAGACA 57.002 29.630 10.62 0.00 43.32 3.41
615 630 9.760926 TCTCAATAAGCTCATAGATGGTATACT 57.239 33.333 2.25 0.00 0.00 2.12
624 639 9.783081 TGCAAAATATCTCAATAAGCTCATAGA 57.217 29.630 0.00 0.00 0.00 1.98
627 642 8.358148 CCTTGCAAAATATCTCAATAAGCTCAT 58.642 33.333 0.00 0.00 0.00 2.90
628 643 7.557358 TCCTTGCAAAATATCTCAATAAGCTCA 59.443 33.333 0.00 0.00 0.00 4.26
629 644 7.934457 TCCTTGCAAAATATCTCAATAAGCTC 58.066 34.615 0.00 0.00 0.00 4.09
630 645 7.886629 TCCTTGCAAAATATCTCAATAAGCT 57.113 32.000 0.00 0.00 0.00 3.74
631 646 8.408601 TCTTCCTTGCAAAATATCTCAATAAGC 58.591 33.333 0.00 0.00 0.00 3.09
632 647 9.947669 CTCTTCCTTGCAAAATATCTCAATAAG 57.052 33.333 0.00 0.00 0.00 1.73
633 648 8.906867 CCTCTTCCTTGCAAAATATCTCAATAA 58.093 33.333 0.00 0.00 0.00 1.40
634 649 8.055181 ACCTCTTCCTTGCAAAATATCTCAATA 58.945 33.333 0.00 0.00 0.00 1.90
635 650 6.894103 ACCTCTTCCTTGCAAAATATCTCAAT 59.106 34.615 0.00 0.00 0.00 2.57
636 651 6.248433 ACCTCTTCCTTGCAAAATATCTCAA 58.752 36.000 0.00 0.00 0.00 3.02
637 652 5.819991 ACCTCTTCCTTGCAAAATATCTCA 58.180 37.500 0.00 0.00 0.00 3.27
638 653 6.765915 AACCTCTTCCTTGCAAAATATCTC 57.234 37.500 0.00 0.00 0.00 2.75
639 654 6.573094 GCAAACCTCTTCCTTGCAAAATATCT 60.573 38.462 0.00 0.00 43.89 1.98
640 655 5.578336 GCAAACCTCTTCCTTGCAAAATATC 59.422 40.000 0.00 0.00 43.89 1.63
641 656 5.482006 GCAAACCTCTTCCTTGCAAAATAT 58.518 37.500 0.00 0.00 43.89 1.28
642 657 4.881920 GCAAACCTCTTCCTTGCAAAATA 58.118 39.130 0.00 0.00 43.89 1.40
643 658 3.732212 GCAAACCTCTTCCTTGCAAAAT 58.268 40.909 0.00 0.00 43.89 1.82
644 659 3.177997 GCAAACCTCTTCCTTGCAAAA 57.822 42.857 0.00 0.00 43.89 2.44
645 660 2.888834 GCAAACCTCTTCCTTGCAAA 57.111 45.000 0.00 0.00 43.89 3.68
648 663 2.297033 TGAATGCAAACCTCTTCCTTGC 59.703 45.455 0.00 0.00 44.54 4.01
649 664 4.796038 ATGAATGCAAACCTCTTCCTTG 57.204 40.909 0.00 0.00 0.00 3.61
650 665 6.916360 TTTATGAATGCAAACCTCTTCCTT 57.084 33.333 0.00 0.00 0.00 3.36
651 666 7.486407 AATTTATGAATGCAAACCTCTTCCT 57.514 32.000 0.00 0.00 0.00 3.36
652 667 7.603784 ACAAATTTATGAATGCAAACCTCTTCC 59.396 33.333 0.00 0.00 0.00 3.46
653 668 8.538409 ACAAATTTATGAATGCAAACCTCTTC 57.462 30.769 0.00 0.00 0.00 2.87
690 705 3.198068 AGCCACACTACGAAATATGCTG 58.802 45.455 0.00 0.00 0.00 4.41
691 706 3.543680 AGCCACACTACGAAATATGCT 57.456 42.857 0.00 0.00 0.00 3.79
701 717 5.080969 TCACAGGTTATTAGCCACACTAC 57.919 43.478 0.00 0.00 0.00 2.73
702 718 4.775780 ACTCACAGGTTATTAGCCACACTA 59.224 41.667 0.00 0.00 0.00 2.74
708 724 5.105473 TGTGTAGACTCACAGGTTATTAGCC 60.105 44.000 4.29 0.00 42.36 3.93
728 744 9.577110 CAAATATCATGAAAGCAAAGTATGTGT 57.423 29.630 0.00 0.00 0.00 3.72
777 793 0.892755 TAGAACCGGTCGATGCTTGT 59.107 50.000 8.04 0.00 0.00 3.16
783 799 3.827302 AGATAATGCTAGAACCGGTCGAT 59.173 43.478 8.04 0.00 0.00 3.59
787 803 5.360591 CAGAAAGATAATGCTAGAACCGGT 58.639 41.667 0.00 0.00 0.00 5.28
791 807 4.811557 ACGGCAGAAAGATAATGCTAGAAC 59.188 41.667 0.00 0.00 39.88 3.01
799 815 4.323417 TCAACACACGGCAGAAAGATAAT 58.677 39.130 0.00 0.00 0.00 1.28
812 828 5.536554 AGAGCAGAATTAATCAACACACG 57.463 39.130 0.00 0.00 0.00 4.49
831 879 6.994496 TCCCAAAGTATGATCTGCAATAAGAG 59.006 38.462 0.00 0.00 0.00 2.85
835 883 6.252599 ACTCCCAAAGTATGATCTGCAATA 57.747 37.500 0.00 0.00 36.07 1.90
853 901 8.063200 ACCTTGCAAATACTTAATAAACTCCC 57.937 34.615 0.00 0.00 0.00 4.30
867 916 7.901029 TGGTCAATCATTTAACCTTGCAAATA 58.099 30.769 0.00 0.00 32.82 1.40
891 940 4.990257 ACATCCTTGATTTGAGCGAAATG 58.010 39.130 1.90 0.00 34.18 2.32
914 963 6.909550 AACTACATCCTTTTAACAATGGCA 57.090 33.333 0.00 0.00 0.00 4.92
915 964 7.602753 AGAAACTACATCCTTTTAACAATGGC 58.397 34.615 0.00 0.00 0.00 4.40
916 965 9.410556 CAAGAAACTACATCCTTTTAACAATGG 57.589 33.333 0.00 0.00 0.00 3.16
917 966 9.965824 ACAAGAAACTACATCCTTTTAACAATG 57.034 29.630 0.00 0.00 0.00 2.82
919 968 9.179909 TGACAAGAAACTACATCCTTTTAACAA 57.820 29.630 0.00 0.00 0.00 2.83
920 969 8.740123 TGACAAGAAACTACATCCTTTTAACA 57.260 30.769 0.00 0.00 0.00 2.41
921 970 9.612620 CATGACAAGAAACTACATCCTTTTAAC 57.387 33.333 0.00 0.00 0.00 2.01
922 971 9.567776 TCATGACAAGAAACTACATCCTTTTAA 57.432 29.630 0.00 0.00 0.00 1.52
923 972 9.739276 ATCATGACAAGAAACTACATCCTTTTA 57.261 29.630 0.00 0.00 0.00 1.52
924 973 8.517878 CATCATGACAAGAAACTACATCCTTTT 58.482 33.333 0.00 0.00 0.00 2.27
925 974 7.667219 ACATCATGACAAGAAACTACATCCTTT 59.333 33.333 0.00 0.00 0.00 3.11
926 975 7.170965 ACATCATGACAAGAAACTACATCCTT 58.829 34.615 0.00 0.00 0.00 3.36
927 976 6.715280 ACATCATGACAAGAAACTACATCCT 58.285 36.000 0.00 0.00 0.00 3.24
928 977 6.820656 AGACATCATGACAAGAAACTACATCC 59.179 38.462 0.00 0.00 0.00 3.51
933 982 8.311395 AGGATAGACATCATGACAAGAAACTA 57.689 34.615 0.00 0.00 32.32 2.24
954 1003 3.964031 AGTTAGAATCTTGAGCCGAGGAT 59.036 43.478 0.00 0.00 0.00 3.24
960 1009 4.633565 CCAACTGAGTTAGAATCTTGAGCC 59.366 45.833 0.00 0.00 0.00 4.70
968 1017 5.762179 TGATGACCCAACTGAGTTAGAAT 57.238 39.130 0.00 0.00 0.00 2.40
975 1024 2.069273 GACGTTGATGACCCAACTGAG 58.931 52.381 0.00 0.00 43.02 3.35
985 1034 2.567169 AGTCCATCCTTGACGTTGATGA 59.433 45.455 15.51 1.72 38.49 2.92
991 1040 1.056660 AACCAGTCCATCCTTGACGT 58.943 50.000 0.00 0.00 37.80 4.34
993 1042 2.859165 TCAACCAGTCCATCCTTGAC 57.141 50.000 0.00 0.00 0.00 3.18
998 1047 2.239654 TGATCCTTCAACCAGTCCATCC 59.760 50.000 0.00 0.00 0.00 3.51
999 1048 3.634397 TGATCCTTCAACCAGTCCATC 57.366 47.619 0.00 0.00 0.00 3.51
1044 1093 7.345653 TCTGATGGTTTAGGAGATTCACTGTAT 59.654 37.037 0.00 0.00 0.00 2.29
1062 1111 2.444766 GGGGATCCAGAATTCTGATGGT 59.555 50.000 32.49 15.99 46.59 3.55
1144 1193 1.347707 ACTGATCTTTCGCCTCCACAA 59.652 47.619 0.00 0.00 0.00 3.33
1212 1261 4.396478 GCAGTAGGGACCTTTTGATTTCTC 59.604 45.833 0.00 0.00 0.00 2.87
1405 1454 2.604912 TTGCAGTCCCTCTGAGAGTA 57.395 50.000 8.88 0.00 46.27 2.59
1434 1483 3.854856 TGCTTCCAACCCAGCAAC 58.145 55.556 0.00 0.00 43.14 4.17
1461 1510 2.334946 CCACAGCACGGTCCATTGG 61.335 63.158 0.00 0.00 0.00 3.16
1626 1675 1.421485 GCAAACATCGCCTGTCTCG 59.579 57.895 0.00 0.00 36.98 4.04
1878 1927 2.826674 TTAATTCCTTGGCCCTCTGG 57.173 50.000 0.00 0.00 0.00 3.86
1956 2005 5.817988 TCTGATACGACCTCTTTACAATCG 58.182 41.667 0.00 0.00 38.71 3.34
2142 2191 1.160137 GAAGTGTCATGACCTGCACC 58.840 55.000 22.85 4.13 34.44 5.01
2244 2299 9.090692 CCTTTCAATTGGTAAGCATAAATTCAG 57.909 33.333 5.42 0.00 0.00 3.02
2279 2334 2.314246 TGGCATCACAAATGTCCACAA 58.686 42.857 0.00 0.00 0.00 3.33
2505 2615 9.270576 GCATAATTTTGTCTATCTATTGCATCG 57.729 33.333 0.00 0.00 0.00 3.84
2697 2807 5.551233 TGTGCTTGCTTATCTTCTACTGTT 58.449 37.500 0.00 0.00 0.00 3.16
2719 2829 2.097466 ACTTCACCAAAAGCACGTTCTG 59.903 45.455 0.00 0.00 0.00 3.02
2785 2900 9.781834 CAGATAAAAGTAAATATCCACGCAAAA 57.218 29.630 0.00 0.00 30.41 2.44
2786 2901 8.952278 ACAGATAAAAGTAAATATCCACGCAAA 58.048 29.630 0.00 0.00 30.41 3.68
2787 2902 8.394877 CACAGATAAAAGTAAATATCCACGCAA 58.605 33.333 0.00 0.00 30.41 4.85
2788 2903 7.466725 GCACAGATAAAAGTAAATATCCACGCA 60.467 37.037 0.00 0.00 30.41 5.24
2789 2904 6.851330 GCACAGATAAAAGTAAATATCCACGC 59.149 38.462 0.00 0.00 30.41 5.34
2790 2905 7.915508 TGCACAGATAAAAGTAAATATCCACG 58.084 34.615 0.00 0.00 30.41 4.94
2791 2906 8.893727 ACTGCACAGATAAAAGTAAATATCCAC 58.106 33.333 4.31 0.00 30.41 4.02
2792 2907 9.461312 AACTGCACAGATAAAAGTAAATATCCA 57.539 29.630 4.31 0.00 30.41 3.41
2793 2908 9.722056 CAACTGCACAGATAAAAGTAAATATCC 57.278 33.333 4.31 0.00 30.41 2.59
2797 2912 8.462016 GGATCAACTGCACAGATAAAAGTAAAT 58.538 33.333 4.31 0.00 0.00 1.40
2798 2913 7.446931 TGGATCAACTGCACAGATAAAAGTAAA 59.553 33.333 4.31 0.00 0.00 2.01
2799 2914 6.939730 TGGATCAACTGCACAGATAAAAGTAA 59.060 34.615 4.31 0.00 0.00 2.24
2800 2915 6.472016 TGGATCAACTGCACAGATAAAAGTA 58.528 36.000 4.31 0.00 0.00 2.24
2801 2916 5.316167 TGGATCAACTGCACAGATAAAAGT 58.684 37.500 4.31 0.00 0.00 2.66
2802 2917 5.885230 TGGATCAACTGCACAGATAAAAG 57.115 39.130 4.31 0.00 0.00 2.27
2803 2918 5.183713 CCTTGGATCAACTGCACAGATAAAA 59.816 40.000 4.31 0.00 0.00 1.52
2945 3070 7.677276 GCGTTTTTCATGTATGAGACTGCTATT 60.677 37.037 0.00 0.00 38.19 1.73
3035 3172 1.001860 GAGAAGAGCTCAAGGCACACT 59.998 52.381 17.77 2.89 43.38 3.55
3049 3186 7.517734 CGAAAACGACCTTGTAAAATGAGAAGA 60.518 37.037 0.00 0.00 0.00 2.87
3147 3284 7.309177 CGAATGTCCTATCGATGATACTCTTT 58.691 38.462 8.54 0.00 41.43 2.52
3219 3356 6.417044 CGTCTTGTTAAACCTCTGGTATATCG 59.583 42.308 0.00 0.00 33.12 2.92
3264 3401 4.226384 AGCATGATAGATAGTGGTGGTGA 58.774 43.478 0.00 0.00 0.00 4.02
3265 3402 4.613925 AGCATGATAGATAGTGGTGGTG 57.386 45.455 0.00 0.00 0.00 4.17
3297 3434 3.064545 CGCCTTCTGAATCCTGAAACATC 59.935 47.826 0.00 0.00 31.31 3.06
3369 3506 2.032426 GTCGAGATTCTCCTCCTCGTTC 59.968 54.545 8.09 0.00 46.79 3.95
3478 3615 4.640805 TTCGTCGAAAATGTTACTGCTC 57.359 40.909 4.91 0.00 0.00 4.26
3480 3617 6.793203 TGTTTATTCGTCGAAAATGTTACTGC 59.207 34.615 12.40 0.00 0.00 4.40
3486 3625 6.344390 GCGTTTTGTTTATTCGTCGAAAATGT 60.344 34.615 12.40 0.00 0.00 2.71
3542 3688 4.021719 ACGAGAAAGACCGACCTGATAAAA 60.022 41.667 0.00 0.00 0.00 1.52
3610 3757 3.179339 TGAACCGGGAAAGGGGCA 61.179 61.111 6.32 0.00 35.02 5.36
3613 3760 1.303317 CACCTGAACCGGGAAAGGG 60.303 63.158 19.24 11.15 33.87 3.95
3697 3844 0.174389 CATAGTCGCACTCTGGCAGT 59.826 55.000 15.27 0.00 34.67 4.40
3705 3873 4.406648 TCCAAATCATCATAGTCGCACT 57.593 40.909 0.00 0.00 0.00 4.40
3706 3874 5.065218 AGTTTCCAAATCATCATAGTCGCAC 59.935 40.000 0.00 0.00 0.00 5.34
3740 3908 2.233431 AGCACAGAGGCAGAGTTAGAAG 59.767 50.000 0.00 0.00 35.83 2.85
3846 4014 0.109086 ACTTGACTCGTCTCGGCATG 60.109 55.000 0.00 0.00 0.00 4.06
3857 4025 2.243407 GACGTCGTGATCACTTGACTC 58.757 52.381 22.95 16.50 0.00 3.36
3873 4041 2.569134 GGCTCTCTTCTGCGACGT 59.431 61.111 0.00 0.00 0.00 4.34
3953 4129 3.197265 GTTCAACCACAGCAAAGCAATT 58.803 40.909 0.00 0.00 0.00 2.32
3959 4135 1.315981 TGCGGTTCAACCACAGCAAA 61.316 50.000 7.52 0.00 43.67 3.68
3984 4160 1.228894 TCGAGGACAAGGTGCTCCT 60.229 57.895 11.49 0.18 45.92 3.69
3999 4175 1.811645 TTCCTGCATGTCACCGTCGA 61.812 55.000 0.00 0.00 0.00 4.20
4000 4176 1.354337 CTTCCTGCATGTCACCGTCG 61.354 60.000 0.00 0.00 0.00 5.12
4001 4177 1.021390 CCTTCCTGCATGTCACCGTC 61.021 60.000 0.00 0.00 0.00 4.79
4002 4178 1.003355 CCTTCCTGCATGTCACCGT 60.003 57.895 0.00 0.00 0.00 4.83
4003 4179 2.401766 GCCTTCCTGCATGTCACCG 61.402 63.158 0.00 0.00 0.00 4.94
4004 4180 1.001641 AGCCTTCCTGCATGTCACC 60.002 57.895 0.00 0.00 0.00 4.02
4047 4301 5.826601 TCATGTACACACAACACAACAAT 57.173 34.783 0.00 0.00 38.42 2.71
4099 4353 1.954146 GCACGCTTCAACACCGAGA 60.954 57.895 0.00 0.00 0.00 4.04
4102 4356 0.524392 TTTTGCACGCTTCAACACCG 60.524 50.000 0.00 0.00 0.00 4.94
4128 4383 9.066892 GGGCAAATATATATCAGACAAGAACAA 57.933 33.333 0.00 0.00 0.00 2.83
4144 4399 5.707242 TTGTTTCAACGTGGGCAAATATA 57.293 34.783 0.00 0.00 0.00 0.86
4145 4400 4.592485 TTGTTTCAACGTGGGCAAATAT 57.408 36.364 0.00 0.00 0.00 1.28
4221 5387 1.002011 GTTTGGCTGGGAGGAGTCC 60.002 63.158 0.00 0.00 43.05 3.85
4241 5407 2.520465 TATGGCTGTGGGTCGTGCAG 62.520 60.000 0.00 0.00 0.00 4.41
4246 5412 2.586079 CGCTATGGCTGTGGGTCG 60.586 66.667 0.00 0.00 36.09 4.79
4282 5448 2.583520 CAGCAGAGAGGAGGTGGC 59.416 66.667 0.00 0.00 0.00 5.01
4406 5607 3.327754 CGTATCTTTCGCCGGCCG 61.328 66.667 23.46 21.04 38.61 6.13
4409 5610 1.949631 GGCTCGTATCTTTCGCCGG 60.950 63.158 0.00 0.00 0.00 6.13
4417 5618 1.364171 GGATGTGCGGCTCGTATCT 59.636 57.895 0.00 0.00 0.00 1.98
4418 5619 1.664965 GGGATGTGCGGCTCGTATC 60.665 63.158 0.00 0.00 0.00 2.24
4419 5620 2.421739 GGGATGTGCGGCTCGTAT 59.578 61.111 0.00 0.00 0.00 3.06
4420 5621 4.201679 CGGGATGTGCGGCTCGTA 62.202 66.667 0.00 0.00 0.00 3.43
4429 5630 4.520846 GCTTTCGCGCGGGATGTG 62.521 66.667 31.69 18.97 0.00 3.21
4431 5632 3.723364 CTTGCTTTCGCGCGGGATG 62.723 63.158 31.69 21.65 39.65 3.51
4432 5633 3.499737 CTTGCTTTCGCGCGGGAT 61.500 61.111 31.69 0.00 39.65 3.85
4433 5634 4.980805 ACTTGCTTTCGCGCGGGA 62.981 61.111 31.69 23.01 39.65 5.14
4434 5635 4.445545 GACTTGCTTTCGCGCGGG 62.446 66.667 31.69 18.21 39.65 6.13
4435 5636 3.711842 TGACTTGCTTTCGCGCGG 61.712 61.111 31.69 15.59 39.65 6.46
4436 5637 2.497628 GTGACTTGCTTTCGCGCG 60.498 61.111 26.76 26.76 39.65 6.86
4437 5638 2.127232 GGTGACTTGCTTTCGCGC 60.127 61.111 0.00 0.00 39.65 6.86
4438 5639 1.082756 GTGGTGACTTGCTTTCGCG 60.083 57.895 0.00 0.00 39.65 5.87
4439 5640 1.282875 GGTGGTGACTTGCTTTCGC 59.717 57.895 0.00 0.00 0.00 4.70
4440 5641 1.569493 CGGTGGTGACTTGCTTTCG 59.431 57.895 0.00 0.00 0.00 3.46
4441 5642 1.282875 GCGGTGGTGACTTGCTTTC 59.717 57.895 0.00 0.00 0.00 2.62
4442 5643 0.823356 ATGCGGTGGTGACTTGCTTT 60.823 50.000 0.00 0.00 0.00 3.51
4443 5644 0.036164 TATGCGGTGGTGACTTGCTT 59.964 50.000 0.00 0.00 0.00 3.91
4444 5645 0.673644 GTATGCGGTGGTGACTTGCT 60.674 55.000 0.00 0.00 0.00 3.91
4445 5646 0.953471 TGTATGCGGTGGTGACTTGC 60.953 55.000 0.00 0.00 0.00 4.01
4446 5647 0.796312 GTGTATGCGGTGGTGACTTG 59.204 55.000 0.00 0.00 0.00 3.16
4447 5648 0.685097 AGTGTATGCGGTGGTGACTT 59.315 50.000 0.00 0.00 0.00 3.01
4448 5649 1.203994 GTAGTGTATGCGGTGGTGACT 59.796 52.381 0.00 0.00 0.00 3.41
4449 5650 1.067425 TGTAGTGTATGCGGTGGTGAC 60.067 52.381 0.00 0.00 0.00 3.67
4450 5651 1.067425 GTGTAGTGTATGCGGTGGTGA 60.067 52.381 0.00 0.00 0.00 4.02
4451 5652 1.337354 TGTGTAGTGTATGCGGTGGTG 60.337 52.381 0.00 0.00 0.00 4.17
4452 5653 0.970640 TGTGTAGTGTATGCGGTGGT 59.029 50.000 0.00 0.00 0.00 4.16
4453 5654 1.203758 TCTGTGTAGTGTATGCGGTGG 59.796 52.381 0.00 0.00 0.00 4.61
4454 5655 2.530177 CTCTGTGTAGTGTATGCGGTG 58.470 52.381 0.00 0.00 0.00 4.94
4455 5656 1.135083 GCTCTGTGTAGTGTATGCGGT 60.135 52.381 0.00 0.00 0.00 5.68
4456 5657 1.560923 GCTCTGTGTAGTGTATGCGG 58.439 55.000 0.00 0.00 0.00 5.69
4457 5658 1.191944 CGCTCTGTGTAGTGTATGCG 58.808 55.000 0.00 0.00 36.41 4.73
4458 5659 0.924090 GCGCTCTGTGTAGTGTATGC 59.076 55.000 0.00 0.00 0.00 3.14
4459 5660 1.191944 CGCGCTCTGTGTAGTGTATG 58.808 55.000 5.56 0.00 0.00 2.39
4460 5661 0.100682 CCGCGCTCTGTGTAGTGTAT 59.899 55.000 5.56 0.00 0.00 2.29
4461 5662 1.504900 CCGCGCTCTGTGTAGTGTA 59.495 57.895 5.56 0.00 0.00 2.90
4462 5663 2.258591 CCGCGCTCTGTGTAGTGT 59.741 61.111 5.56 0.00 0.00 3.55
4463 5664 3.181967 GCCGCGCTCTGTGTAGTG 61.182 66.667 5.56 0.00 0.00 2.74
4464 5665 4.436998 GGCCGCGCTCTGTGTAGT 62.437 66.667 5.56 0.00 0.00 2.73
4476 5677 3.330853 CTATTCTCGTGCGGCCGC 61.331 66.667 42.35 42.35 42.35 6.53
4477 5678 2.658593 CCTATTCTCGTGCGGCCG 60.659 66.667 24.05 24.05 0.00 6.13
4478 5679 2.967615 GCCTATTCTCGTGCGGCC 60.968 66.667 0.00 0.00 34.75 6.13
4479 5680 2.967615 GGCCTATTCTCGTGCGGC 60.968 66.667 0.00 0.00 39.98 6.53
4480 5681 1.592669 CTGGCCTATTCTCGTGCGG 60.593 63.158 3.32 0.00 0.00 5.69
4481 5682 2.240500 GCTGGCCTATTCTCGTGCG 61.241 63.158 3.32 0.00 0.00 5.34
4482 5683 0.533755 ATGCTGGCCTATTCTCGTGC 60.534 55.000 3.32 0.00 0.00 5.34
4483 5684 1.202568 TCATGCTGGCCTATTCTCGTG 60.203 52.381 3.32 0.00 0.00 4.35
4484 5685 1.123077 TCATGCTGGCCTATTCTCGT 58.877 50.000 3.32 0.00 0.00 4.18
4485 5686 1.869767 GTTCATGCTGGCCTATTCTCG 59.130 52.381 3.32 0.00 0.00 4.04
4486 5687 2.225467 GGTTCATGCTGGCCTATTCTC 58.775 52.381 3.32 0.00 0.00 2.87
4487 5688 1.133668 GGGTTCATGCTGGCCTATTCT 60.134 52.381 3.32 0.00 0.00 2.40
4488 5689 1.322442 GGGTTCATGCTGGCCTATTC 58.678 55.000 3.32 0.00 0.00 1.75
4489 5690 0.630673 TGGGTTCATGCTGGCCTATT 59.369 50.000 3.32 0.00 0.00 1.73
4490 5691 0.184451 CTGGGTTCATGCTGGCCTAT 59.816 55.000 3.32 0.00 0.00 2.57
4491 5692 0.913934 TCTGGGTTCATGCTGGCCTA 60.914 55.000 3.32 0.00 0.00 3.93
4492 5693 2.233566 TCTGGGTTCATGCTGGCCT 61.234 57.895 3.32 0.00 0.00 5.19
4493 5694 2.048603 GTCTGGGTTCATGCTGGCC 61.049 63.158 0.00 0.00 0.00 5.36
4494 5695 2.401766 CGTCTGGGTTCATGCTGGC 61.402 63.158 0.00 0.00 0.00 4.85
4495 5696 0.742281 CTCGTCTGGGTTCATGCTGG 60.742 60.000 0.00 0.00 0.00 4.85
4496 5697 0.742281 CCTCGTCTGGGTTCATGCTG 60.742 60.000 0.00 0.00 0.00 4.41
4497 5698 1.599047 CCTCGTCTGGGTTCATGCT 59.401 57.895 0.00 0.00 0.00 3.79
4498 5699 2.109126 GCCTCGTCTGGGTTCATGC 61.109 63.158 0.00 0.00 0.00 4.06
4499 5700 1.450312 GGCCTCGTCTGGGTTCATG 60.450 63.158 0.00 0.00 0.00 3.07
4500 5701 2.670148 GGGCCTCGTCTGGGTTCAT 61.670 63.158 0.84 0.00 0.00 2.57
4501 5702 3.319198 GGGCCTCGTCTGGGTTCA 61.319 66.667 0.84 0.00 0.00 3.18
4502 5703 4.097361 GGGGCCTCGTCTGGGTTC 62.097 72.222 0.84 0.00 0.00 3.62
4503 5704 4.658786 AGGGGCCTCGTCTGGGTT 62.659 66.667 0.84 0.00 0.00 4.11
4506 5707 2.946988 TATCCAGGGGCCTCGTCTGG 62.947 65.000 17.68 17.68 46.91 3.86
4507 5708 1.457643 TATCCAGGGGCCTCGTCTG 60.458 63.158 0.84 1.44 0.00 3.51
4508 5709 1.152440 CTATCCAGGGGCCTCGTCT 60.152 63.158 0.84 0.00 0.00 4.18
4509 5710 2.873525 GCTATCCAGGGGCCTCGTC 61.874 68.421 0.84 0.00 0.00 4.20
4510 5711 2.844839 GCTATCCAGGGGCCTCGT 60.845 66.667 0.84 0.00 0.00 4.18
4511 5712 3.631046 GGCTATCCAGGGGCCTCG 61.631 72.222 0.84 0.00 42.31 4.63
4521 5722 1.119574 TTAGGCGGTGGAGGCTATCC 61.120 60.000 1.22 1.92 46.43 2.59
4522 5723 0.318762 CTTAGGCGGTGGAGGCTATC 59.681 60.000 1.22 0.00 46.43 2.08
4523 5724 0.105658 TCTTAGGCGGTGGAGGCTAT 60.106 55.000 1.22 0.00 46.43 2.97
4524 5725 1.041447 GTCTTAGGCGGTGGAGGCTA 61.041 60.000 0.00 0.00 45.66 3.93
4526 5727 2.187163 GTCTTAGGCGGTGGAGGC 59.813 66.667 0.00 0.00 0.00 4.70
4527 5728 1.517832 CTGTCTTAGGCGGTGGAGG 59.482 63.158 0.00 0.00 0.00 4.30
4528 5729 1.517832 CCTGTCTTAGGCGGTGGAG 59.482 63.158 0.00 0.00 40.38 3.86
4529 5730 3.708210 CCTGTCTTAGGCGGTGGA 58.292 61.111 0.00 0.00 40.38 4.02
4537 5738 2.125106 GTGGCGGGCCTGTCTTAG 60.125 66.667 19.02 0.00 36.94 2.18
4538 5739 3.712907 GGTGGCGGGCCTGTCTTA 61.713 66.667 19.02 0.00 36.94 2.10
4550 5751 3.984193 ATCTCTGCGCTTGGGTGGC 62.984 63.158 9.73 0.00 0.00 5.01
4551 5752 1.817099 GATCTCTGCGCTTGGGTGG 60.817 63.158 9.73 0.00 0.00 4.61
4552 5753 1.817099 GGATCTCTGCGCTTGGGTG 60.817 63.158 9.73 0.00 0.00 4.61
4553 5754 2.586792 GGATCTCTGCGCTTGGGT 59.413 61.111 9.73 0.00 0.00 4.51
4554 5755 2.587194 CGGATCTCTGCGCTTGGG 60.587 66.667 9.73 0.96 0.00 4.12
4562 5763 4.933064 GACGCGGGCGGATCTCTG 62.933 72.222 18.03 0.00 44.69 3.35
4575 5776 4.344474 CTCCTATCGGGGCGACGC 62.344 72.222 12.43 12.43 39.18 5.19
4576 5777 2.131294 CTTCTCCTATCGGGGCGACG 62.131 65.000 0.00 0.00 39.18 5.12
4577 5778 1.660917 CTTCTCCTATCGGGGCGAC 59.339 63.158 0.00 0.00 39.18 5.19
4578 5779 2.201022 GCTTCTCCTATCGGGGCGA 61.201 63.158 0.00 0.00 41.13 5.54
4579 5780 2.340443 GCTTCTCCTATCGGGGCG 59.660 66.667 0.00 0.00 35.33 6.13
4580 5781 1.839296 AGGCTTCTCCTATCGGGGC 60.839 63.158 0.00 0.00 45.41 5.80
4581 5782 4.629442 AGGCTTCTCCTATCGGGG 57.371 61.111 0.00 0.00 45.41 5.73
4589 5790 1.220477 GCAGAGGTGAGGCTTCTCC 59.780 63.158 8.80 8.80 36.72 3.71
4590 5791 1.220477 GGCAGAGGTGAGGCTTCTC 59.780 63.158 0.00 0.00 38.00 2.87
4591 5792 2.654079 CGGCAGAGGTGAGGCTTCT 61.654 63.158 0.00 0.00 33.43 2.85
4592 5793 2.125350 CGGCAGAGGTGAGGCTTC 60.125 66.667 0.00 0.00 0.00 3.86
4593 5794 2.925170 ACGGCAGAGGTGAGGCTT 60.925 61.111 0.00 0.00 0.00 4.35
4594 5795 3.386237 GACGGCAGAGGTGAGGCT 61.386 66.667 0.00 0.00 0.00 4.58
4595 5796 4.459089 GGACGGCAGAGGTGAGGC 62.459 72.222 0.00 0.00 0.00 4.70
4596 5797 4.135153 CGGACGGCAGAGGTGAGG 62.135 72.222 0.00 0.00 0.00 3.86
4597 5798 3.343788 GACGGACGGCAGAGGTGAG 62.344 68.421 0.00 0.00 0.00 3.51
4598 5799 3.371063 GACGGACGGCAGAGGTGA 61.371 66.667 0.00 0.00 0.00 4.02
4599 5800 4.778415 CGACGGACGGCAGAGGTG 62.778 72.222 0.00 0.00 38.46 4.00
4612 5813 3.484547 GGCTTAACCCGTGCGACG 61.485 66.667 0.00 0.00 42.11 5.12
4622 5823 3.583086 GATGCGGCCGGGCTTAAC 61.583 66.667 29.38 12.97 0.00 2.01
4623 5824 3.630298 TTGATGCGGCCGGGCTTAA 62.630 57.895 29.38 11.57 0.00 1.85
4624 5825 4.102815 TTGATGCGGCCGGGCTTA 62.103 61.111 29.38 14.97 0.00 3.09
4630 5831 4.812476 TCTCGGTTGATGCGGCCG 62.812 66.667 24.05 24.05 46.12 6.13
4631 5832 2.892425 CTCTCGGTTGATGCGGCC 60.892 66.667 0.00 0.00 0.00 6.13
4632 5833 3.567797 GCTCTCGGTTGATGCGGC 61.568 66.667 0.00 0.00 0.00 6.53
4633 5834 2.125552 TGCTCTCGGTTGATGCGG 60.126 61.111 0.00 0.00 0.00 5.69
4634 5835 2.806856 GCTGCTCTCGGTTGATGCG 61.807 63.158 0.00 0.00 0.00 4.73
4635 5836 2.806856 CGCTGCTCTCGGTTGATGC 61.807 63.158 0.00 0.00 0.00 3.91
4636 5837 1.144565 CTCGCTGCTCTCGGTTGATG 61.145 60.000 0.00 0.00 0.00 3.07
4637 5838 1.140589 CTCGCTGCTCTCGGTTGAT 59.859 57.895 0.00 0.00 0.00 2.57
4638 5839 2.568612 CTCGCTGCTCTCGGTTGA 59.431 61.111 0.00 0.00 0.00 3.18
4639 5840 2.507992 CCTCGCTGCTCTCGGTTG 60.508 66.667 0.00 0.00 0.00 3.77
4640 5841 3.764466 CCCTCGCTGCTCTCGGTT 61.764 66.667 0.00 0.00 0.00 4.44
4643 5844 2.790791 ATTCCCCTCGCTGCTCTCG 61.791 63.158 0.00 0.00 0.00 4.04
4644 5845 1.227497 CATTCCCCTCGCTGCTCTC 60.227 63.158 0.00 0.00 0.00 3.20
4645 5846 2.739996 CCATTCCCCTCGCTGCTCT 61.740 63.158 0.00 0.00 0.00 4.09
4646 5847 2.203126 CCATTCCCCTCGCTGCTC 60.203 66.667 0.00 0.00 0.00 4.26
4647 5848 3.801997 CCCATTCCCCTCGCTGCT 61.802 66.667 0.00 0.00 0.00 4.24
4648 5849 4.115199 ACCCATTCCCCTCGCTGC 62.115 66.667 0.00 0.00 0.00 5.25
4649 5850 2.190578 GACCCATTCCCCTCGCTG 59.809 66.667 0.00 0.00 0.00 5.18
4650 5851 3.470888 CGACCCATTCCCCTCGCT 61.471 66.667 0.00 0.00 0.00 4.93
4652 5853 3.781307 TGCGACCCATTCCCCTCG 61.781 66.667 0.00 0.00 0.00 4.63
4653 5854 2.124695 GTGCGACCCATTCCCCTC 60.125 66.667 0.00 0.00 0.00 4.30
4654 5855 4.096003 CGTGCGACCCATTCCCCT 62.096 66.667 0.00 0.00 0.00 4.79
4657 5858 2.524951 TAACCCGTGCGACCCATTCC 62.525 60.000 0.00 0.00 0.00 3.01
4658 5859 0.674269 TTAACCCGTGCGACCCATTC 60.674 55.000 0.00 0.00 0.00 2.67
4659 5860 0.675522 CTTAACCCGTGCGACCCATT 60.676 55.000 0.00 0.00 0.00 3.16
4660 5861 1.078708 CTTAACCCGTGCGACCCAT 60.079 57.895 0.00 0.00 0.00 4.00
4661 5862 2.344500 CTTAACCCGTGCGACCCA 59.656 61.111 0.00 0.00 0.00 4.51
4662 5863 3.122971 GCTTAACCCGTGCGACCC 61.123 66.667 0.00 0.00 0.00 4.46
4663 5864 3.122971 GGCTTAACCCGTGCGACC 61.123 66.667 0.00 0.00 0.00 4.79
4673 5874 3.583086 GATGCGGCCGGGCTTAAC 61.583 66.667 29.38 12.97 0.00 2.01
4674 5875 3.630298 TTGATGCGGCCGGGCTTAA 62.630 57.895 29.38 11.57 0.00 1.85
4675 5876 4.102815 TTGATGCGGCCGGGCTTA 62.103 61.111 29.38 14.97 0.00 3.09
4682 5883 3.499737 CTGTCGGTTGATGCGGCC 61.500 66.667 0.00 0.00 0.00 6.13
4683 5884 4.166011 GCTGTCGGTTGATGCGGC 62.166 66.667 0.00 0.00 0.00 6.53
4684 5885 2.741985 TGCTGTCGGTTGATGCGG 60.742 61.111 0.00 0.00 31.73 5.69
4685 5886 2.780643 CTGCTGTCGGTTGATGCG 59.219 61.111 0.00 0.00 31.73 4.73
4686 5887 2.482374 GCTGCTGTCGGTTGATGC 59.518 61.111 0.00 0.00 0.00 3.91
4687 5888 1.690283 CTCGCTGCTGTCGGTTGATG 61.690 60.000 0.00 0.00 0.00 3.07
4688 5889 1.446792 CTCGCTGCTGTCGGTTGAT 60.447 57.895 0.00 0.00 0.00 2.57
4689 5890 2.049156 CTCGCTGCTGTCGGTTGA 60.049 61.111 0.00 0.00 0.00 3.18
4690 5891 3.114616 CCTCGCTGCTGTCGGTTG 61.115 66.667 0.00 0.92 0.00 3.77
4691 5892 4.379243 CCCTCGCTGCTGTCGGTT 62.379 66.667 0.00 0.00 0.00 4.44
4694 5895 3.376935 ATTCCCCTCGCTGCTGTCG 62.377 63.158 0.00 0.00 0.00 4.35
4695 5896 1.817099 CATTCCCCTCGCTGCTGTC 60.817 63.158 0.00 0.00 0.00 3.51
4696 5897 2.270205 CATTCCCCTCGCTGCTGT 59.730 61.111 0.00 0.00 0.00 4.40
4697 5898 2.515523 CCATTCCCCTCGCTGCTG 60.516 66.667 0.00 0.00 0.00 4.41
4698 5899 3.801997 CCCATTCCCCTCGCTGCT 61.802 66.667 0.00 0.00 0.00 4.24
4699 5900 4.115199 ACCCATTCCCCTCGCTGC 62.115 66.667 0.00 0.00 0.00 5.25
4700 5901 2.124570 CACCCATTCCCCTCGCTG 60.125 66.667 0.00 0.00 0.00 5.18
4701 5902 3.411517 CCACCCATTCCCCTCGCT 61.412 66.667 0.00 0.00 0.00 4.93
4702 5903 3.407967 TCCACCCATTCCCCTCGC 61.408 66.667 0.00 0.00 0.00 5.03
4703 5904 2.257409 CTGTCCACCCATTCCCCTCG 62.257 65.000 0.00 0.00 0.00 4.63
4704 5905 1.609783 CTGTCCACCCATTCCCCTC 59.390 63.158 0.00 0.00 0.00 4.30
4705 5906 1.930656 CCTGTCCACCCATTCCCCT 60.931 63.158 0.00 0.00 0.00 4.79
4706 5907 1.926426 CTCCTGTCCACCCATTCCCC 61.926 65.000 0.00 0.00 0.00 4.81
4707 5908 1.609783 CTCCTGTCCACCCATTCCC 59.390 63.158 0.00 0.00 0.00 3.97
4708 5909 1.609783 CCTCCTGTCCACCCATTCC 59.390 63.158 0.00 0.00 0.00 3.01
4709 5910 0.914417 TCCCTCCTGTCCACCCATTC 60.914 60.000 0.00 0.00 0.00 2.67
4710 5911 0.916358 CTCCCTCCTGTCCACCCATT 60.916 60.000 0.00 0.00 0.00 3.16
4711 5912 1.307343 CTCCCTCCTGTCCACCCAT 60.307 63.158 0.00 0.00 0.00 4.00
4712 5913 2.122729 CTCCCTCCTGTCCACCCA 59.877 66.667 0.00 0.00 0.00 4.51
4713 5914 1.990614 GACTCCCTCCTGTCCACCC 60.991 68.421 0.00 0.00 0.00 4.61
4714 5915 3.715015 GACTCCCTCCTGTCCACC 58.285 66.667 0.00 0.00 0.00 4.61
4727 5928 1.995646 GAAGGCGACGAGGAGGACTC 61.996 65.000 0.00 0.00 43.02 3.36
4728 5929 2.035940 AAGGCGACGAGGAGGACT 59.964 61.111 0.00 0.00 0.00 3.85
4729 5930 2.272918 CTGAAGGCGACGAGGAGGAC 62.273 65.000 0.00 0.00 0.00 3.85
4730 5931 2.035155 TGAAGGCGACGAGGAGGA 59.965 61.111 0.00 0.00 0.00 3.71
4731 5932 2.492090 CTGAAGGCGACGAGGAGG 59.508 66.667 0.00 0.00 0.00 4.30
4732 5933 2.202676 GCTGAAGGCGACGAGGAG 60.203 66.667 0.00 0.00 0.00 3.69
4741 5942 3.741476 CTTGGTGGCGCTGAAGGC 61.741 66.667 7.64 0.00 37.64 4.35
4742 5943 3.741476 GCTTGGTGGCGCTGAAGG 61.741 66.667 7.64 0.00 0.00 3.46
4790 5991 1.744320 GATGGTTTAATGGGCCGGCC 61.744 60.000 38.57 38.57 0.00 6.13
4791 5992 1.739667 GATGGTTTAATGGGCCGGC 59.260 57.895 21.18 21.18 0.00 6.13
4792 5993 2.029743 CGATGGTTTAATGGGCCGG 58.970 57.895 0.00 0.00 0.00 6.13
4793 5994 1.101049 AGCGATGGTTTAATGGGCCG 61.101 55.000 0.00 0.00 0.00 6.13
4794 5995 1.607148 GTAGCGATGGTTTAATGGGCC 59.393 52.381 0.00 0.00 0.00 5.80
4795 5996 1.607148 GGTAGCGATGGTTTAATGGGC 59.393 52.381 0.00 0.00 0.00 5.36
4796 5997 3.208747 AGGTAGCGATGGTTTAATGGG 57.791 47.619 0.00 0.00 0.00 4.00
4797 5998 5.357032 AGAAAAGGTAGCGATGGTTTAATGG 59.643 40.000 0.00 0.00 0.00 3.16
4798 5999 6.436843 AGAAAAGGTAGCGATGGTTTAATG 57.563 37.500 0.00 0.00 0.00 1.90
4799 6000 7.312899 CAAAGAAAAGGTAGCGATGGTTTAAT 58.687 34.615 0.00 0.00 0.00 1.40
4800 6001 6.294286 CCAAAGAAAAGGTAGCGATGGTTTAA 60.294 38.462 0.00 0.00 0.00 1.52
4801 6002 5.182380 CCAAAGAAAAGGTAGCGATGGTTTA 59.818 40.000 0.00 0.00 0.00 2.01
4802 6003 4.022329 CCAAAGAAAAGGTAGCGATGGTTT 60.022 41.667 0.00 0.00 0.00 3.27
4803 6004 3.506067 CCAAAGAAAAGGTAGCGATGGTT 59.494 43.478 0.00 0.00 0.00 3.67
4804 6005 3.081804 CCAAAGAAAAGGTAGCGATGGT 58.918 45.455 0.00 0.00 0.00 3.55
4805 6006 2.159379 GCCAAAGAAAAGGTAGCGATGG 60.159 50.000 0.00 0.00 0.00 3.51
4806 6007 2.749621 AGCCAAAGAAAAGGTAGCGATG 59.250 45.455 0.00 0.00 0.00 3.84
4807 6008 3.010420 GAGCCAAAGAAAAGGTAGCGAT 58.990 45.455 0.00 0.00 0.00 4.58
4808 6009 2.423577 GAGCCAAAGAAAAGGTAGCGA 58.576 47.619 0.00 0.00 0.00 4.93
4809 6010 1.468914 GGAGCCAAAGAAAAGGTAGCG 59.531 52.381 0.00 0.00 0.00 4.26
4810 6011 1.819288 GGGAGCCAAAGAAAAGGTAGC 59.181 52.381 0.00 0.00 0.00 3.58
4811 6012 2.084546 CGGGAGCCAAAGAAAAGGTAG 58.915 52.381 0.00 0.00 0.00 3.18
4812 6013 2.194201 CGGGAGCCAAAGAAAAGGTA 57.806 50.000 0.00 0.00 0.00 3.08
4813 6014 3.036431 CGGGAGCCAAAGAAAAGGT 57.964 52.632 0.00 0.00 0.00 3.50
4828 6029 2.336809 GACTAGCGATCCAGCGGG 59.663 66.667 0.00 0.00 43.00 6.13
4829 6030 2.336809 GGACTAGCGATCCAGCGG 59.663 66.667 0.00 0.00 43.00 5.52
4830 6031 2.336809 GGGACTAGCGATCCAGCG 59.663 66.667 6.32 0.00 43.00 5.18
4831 6032 1.365633 CTGGGACTAGCGATCCAGC 59.634 63.158 7.88 0.00 40.04 4.85
4832 6033 1.365633 GCTGGGACTAGCGATCCAG 59.634 63.158 13.63 13.63 46.93 3.86
4833 6034 3.538614 GCTGGGACTAGCGATCCA 58.461 61.111 6.32 0.00 38.06 3.41
4839 6040 0.965439 ATGATCGAGCTGGGACTAGC 59.035 55.000 0.90 0.00 44.01 3.42
4840 6041 3.742433 AAATGATCGAGCTGGGACTAG 57.258 47.619 0.90 0.00 0.00 2.57
4841 6042 4.487714 AAAAATGATCGAGCTGGGACTA 57.512 40.909 0.90 0.00 0.00 2.59
4842 6043 3.356529 AAAAATGATCGAGCTGGGACT 57.643 42.857 0.90 0.00 0.00 3.85
4860 6061 3.130340 AGCAGTTTTTGGCGAGAGAAAAA 59.870 39.130 0.00 0.00 34.54 1.94
4861 6062 2.687935 AGCAGTTTTTGGCGAGAGAAAA 59.312 40.909 0.00 0.00 34.54 2.29
4862 6063 2.297701 AGCAGTTTTTGGCGAGAGAAA 58.702 42.857 0.00 0.00 34.54 2.52
4863 6064 1.967319 AGCAGTTTTTGGCGAGAGAA 58.033 45.000 0.00 0.00 34.54 2.87
4864 6065 2.224185 TGTAGCAGTTTTTGGCGAGAGA 60.224 45.455 0.00 0.00 34.54 3.10
4865 6066 2.143122 TGTAGCAGTTTTTGGCGAGAG 58.857 47.619 0.00 0.00 34.54 3.20
4866 6067 2.248280 TGTAGCAGTTTTTGGCGAGA 57.752 45.000 0.00 0.00 34.54 4.04
4867 6068 3.559238 AATGTAGCAGTTTTTGGCGAG 57.441 42.857 0.00 0.00 34.54 5.03
4868 6069 3.438781 CCTAATGTAGCAGTTTTTGGCGA 59.561 43.478 0.00 0.00 34.54 5.54
4869 6070 3.190535 ACCTAATGTAGCAGTTTTTGGCG 59.809 43.478 0.00 0.00 34.54 5.69
4870 6071 4.783764 ACCTAATGTAGCAGTTTTTGGC 57.216 40.909 0.00 0.00 0.00 4.52
4871 6072 6.653320 TCAGTACCTAATGTAGCAGTTTTTGG 59.347 38.462 0.00 0.00 0.00 3.28
4872 6073 7.667043 TCAGTACCTAATGTAGCAGTTTTTG 57.333 36.000 0.00 0.00 0.00 2.44
4873 6074 8.863872 AATCAGTACCTAATGTAGCAGTTTTT 57.136 30.769 0.00 0.00 0.00 1.94
4874 6075 8.863872 AAATCAGTACCTAATGTAGCAGTTTT 57.136 30.769 0.00 0.00 0.00 2.43
4875 6076 8.863872 AAAATCAGTACCTAATGTAGCAGTTT 57.136 30.769 0.00 0.00 0.00 2.66
4876 6077 8.322091 AGAAAATCAGTACCTAATGTAGCAGTT 58.678 33.333 0.00 0.00 0.00 3.16
4877 6078 7.852263 AGAAAATCAGTACCTAATGTAGCAGT 58.148 34.615 0.00 0.00 0.00 4.40
4878 6079 8.723942 AAGAAAATCAGTACCTAATGTAGCAG 57.276 34.615 0.00 0.00 0.00 4.24
4879 6080 9.817809 CTAAGAAAATCAGTACCTAATGTAGCA 57.182 33.333 0.00 0.00 0.00 3.49
4887 6088 9.511272 GGGTTTTTCTAAGAAAATCAGTACCTA 57.489 33.333 1.88 0.00 32.52 3.08
4888 6089 8.002459 TGGGTTTTTCTAAGAAAATCAGTACCT 58.998 33.333 1.88 0.00 32.52 3.08
4889 6090 8.173542 TGGGTTTTTCTAAGAAAATCAGTACC 57.826 34.615 0.00 0.00 32.52 3.34
4890 6091 9.459640 GTTGGGTTTTTCTAAGAAAATCAGTAC 57.540 33.333 0.00 0.00 32.52 2.73
4891 6092 8.635328 GGTTGGGTTTTTCTAAGAAAATCAGTA 58.365 33.333 0.00 0.00 32.52 2.74
4892 6093 7.497595 GGTTGGGTTTTTCTAAGAAAATCAGT 58.502 34.615 0.00 0.00 32.52 3.41
4893 6094 6.640907 CGGTTGGGTTTTTCTAAGAAAATCAG 59.359 38.462 0.00 0.00 32.52 2.90
4894 6095 6.461788 CCGGTTGGGTTTTTCTAAGAAAATCA 60.462 38.462 0.00 0.00 32.52 2.57
4895 6096 5.924254 CCGGTTGGGTTTTTCTAAGAAAATC 59.076 40.000 0.00 0.00 31.80 2.17
4896 6097 5.849510 CCGGTTGGGTTTTTCTAAGAAAAT 58.150 37.500 0.00 0.00 31.80 1.82
4897 6098 5.265350 CCGGTTGGGTTTTTCTAAGAAAA 57.735 39.130 0.00 0.00 0.00 2.29
4898 6099 4.922471 CCGGTTGGGTTTTTCTAAGAAA 57.078 40.909 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.