Multiple sequence alignment - TraesCS1A01G234200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G234200 chr1A 100.000 7916 0 0 1 7916 409826847 409834762 0.000000e+00 14619.0
1 TraesCS1A01G234200 chr1A 91.954 87 7 0 4899 4985 409831654 409831740 1.080000e-23 122.0
2 TraesCS1A01G234200 chr1A 91.954 87 7 0 4808 4894 409831745 409831831 1.080000e-23 122.0
3 TraesCS1A01G234200 chr1A 93.443 61 3 1 5650 5709 409832466 409832526 1.090000e-13 89.8
4 TraesCS1A01G234200 chr1A 93.443 61 3 1 5620 5680 409832496 409832555 1.090000e-13 89.8
5 TraesCS1A01G234200 chr1B 96.939 3430 84 14 2258 5680 441658894 441655479 0.000000e+00 5733.0
6 TraesCS1A01G234200 chr1B 94.014 2222 67 27 3 2200 441661065 441658886 0.000000e+00 3306.0
7 TraesCS1A01G234200 chr1B 94.462 1553 57 17 5650 7184 441655537 441653996 0.000000e+00 2364.0
8 TraesCS1A01G234200 chr1B 87.109 256 13 9 7204 7450 441654011 441653767 1.010000e-68 272.0
9 TraesCS1A01G234200 chr1B 85.093 161 18 5 2085 2243 592646284 592646128 8.220000e-35 159.0
10 TraesCS1A01G234200 chr1B 94.253 87 5 0 4808 4894 441656258 441656172 4.980000e-27 134.0
11 TraesCS1A01G234200 chr1B 86.792 106 12 2 2141 2245 11695076 11694972 5.020000e-22 117.0
12 TraesCS1A01G234200 chr1B 92.000 50 4 0 7771 7820 441653696 441653647 3.960000e-08 71.3
13 TraesCS1A01G234200 chr1D 92.529 3400 139 50 1 3351 326976525 326973192 0.000000e+00 4765.0
14 TraesCS1A01G234200 chr1D 93.215 2255 97 19 3403 5650 326973206 326971001 0.000000e+00 3265.0
15 TraesCS1A01G234200 chr1D 94.241 1528 57 18 5680 7184 326971030 326969511 0.000000e+00 2305.0
16 TraesCS1A01G234200 chr1D 87.574 169 14 3 7204 7371 326969526 326969364 1.050000e-43 189.0
17 TraesCS1A01G234200 chr1D 93.103 87 6 0 4808 4894 326971750 326971664 2.320000e-25 128.0
18 TraesCS1A01G234200 chr5A 85.597 243 23 3 7497 7727 562386698 562386456 2.210000e-60 244.0
19 TraesCS1A01G234200 chr5A 81.897 232 30 3 7500 7721 693649433 693649662 1.360000e-42 185.0
20 TraesCS1A01G234200 chr5A 92.424 66 5 0 7851 7916 347461286 347461351 2.350000e-15 95.3
21 TraesCS1A01G234200 chr5A 96.078 51 2 0 3353 3403 397752259 397752309 5.090000e-12 84.2
22 TraesCS1A01G234200 chr6A 84.348 230 21 3 7501 7720 199160777 199160553 2.240000e-50 211.0
23 TraesCS1A01G234200 chr6A 92.647 68 5 0 7846 7913 611109888 611109821 1.820000e-16 99.0
24 TraesCS1A01G234200 chr5D 83.401 247 22 6 7497 7727 445106402 445106159 2.240000e-50 211.0
25 TraesCS1A01G234200 chr5D 77.540 187 28 12 2084 2261 106983911 106983730 5.050000e-17 100.0
26 TraesCS1A01G234200 chr5D 96.078 51 2 0 3353 3403 147796428 147796378 5.090000e-12 84.2
27 TraesCS1A01G234200 chr3D 83.830 235 24 3 7501 7722 418784966 418784733 2.240000e-50 211.0
28 TraesCS1A01G234200 chr3D 78.889 180 33 4 2083 2259 76398457 76398280 5.020000e-22 117.0
29 TraesCS1A01G234200 chr3A 82.833 233 25 7 7500 7721 515951806 515951578 2.250000e-45 195.0
30 TraesCS1A01G234200 chr3A 84.091 132 21 0 2127 2258 52199484 52199353 2.320000e-25 128.0
31 TraesCS1A01G234200 chr3A 92.424 66 5 0 7851 7916 696313968 696313903 2.350000e-15 95.3
32 TraesCS1A01G234200 chr6D 81.466 232 26 4 7501 7722 148175131 148175355 2.940000e-39 174.0
33 TraesCS1A01G234200 chr6D 100.000 30 0 0 7692 7721 154359063 154359092 1.000000e-03 56.5
34 TraesCS1A01G234200 chr2D 80.519 231 29 5 7500 7720 37625853 37626077 6.360000e-36 163.0
35 TraesCS1A01G234200 chr2B 78.195 266 41 13 2082 2333 8075355 8075617 3.830000e-33 154.0
36 TraesCS1A01G234200 chr3B 78.889 180 33 4 2083 2259 123396888 123396711 5.020000e-22 117.0
37 TraesCS1A01G234200 chr3B 88.889 99 6 2 7522 7618 140401752 140401657 5.020000e-22 117.0
38 TraesCS1A01G234200 chr3B 93.939 66 4 0 7851 7916 519398292 519398357 5.050000e-17 100.0
39 TraesCS1A01G234200 chr3B 83.178 107 17 1 2084 2190 95164527 95164422 6.540000e-16 97.1
40 TraesCS1A01G234200 chr3B 96.078 51 2 0 3353 3403 412004914 412004964 5.090000e-12 84.2
41 TraesCS1A01G234200 chr4A 93.939 66 4 0 7851 7916 648759560 648759495 5.050000e-17 100.0
42 TraesCS1A01G234200 chr4A 92.424 66 5 0 7851 7916 608991039 608991104 2.350000e-15 95.3
43 TraesCS1A01G234200 chr2A 92.424 66 5 0 7851 7916 32383839 32383774 2.350000e-15 95.3
44 TraesCS1A01G234200 chr2A 94.444 54 3 0 3353 3406 8629552 8629499 5.090000e-12 84.2
45 TraesCS1A01G234200 chr7A 86.585 82 7 3 7839 7916 569453262 569453343 3.940000e-13 87.9
46 TraesCS1A01G234200 chr7B 87.179 78 6 3 7841 7914 547956441 547956518 1.420000e-12 86.1
47 TraesCS1A01G234200 chr4D 96.078 51 2 0 3353 3403 38357712 38357762 5.090000e-12 84.2
48 TraesCS1A01G234200 chr4D 96.078 51 2 0 3353 3403 505534294 505534244 5.090000e-12 84.2
49 TraesCS1A01G234200 chr6B 91.525 59 3 2 3353 3409 526909469 526909527 6.580000e-11 80.5
50 TraesCS1A01G234200 chr6B 91.525 59 3 2 3353 3409 526941982 526942040 6.580000e-11 80.5
51 TraesCS1A01G234200 chr7D 93.478 46 2 1 4106 4150 124519538 124519493 5.130000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G234200 chr1A 409826847 409834762 7915 False 3008.52 14619 94.1588 1 7916 5 chr1A.!!$F1 7915
1 TraesCS1A01G234200 chr1B 441653647 441661065 7418 True 1980.05 5733 93.1295 3 7820 6 chr1B.!!$R3 7817
2 TraesCS1A01G234200 chr1D 326969364 326976525 7161 True 2130.40 4765 92.1324 1 7371 5 chr1D.!!$R1 7370

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 338 0.041833 CTCTTCCCACCTCTCCTCCA 59.958 60.000 0.00 0.0 0.0 3.86 F
627 662 0.658244 GGTCGCCGTTTCCGTTTTTC 60.658 55.000 0.00 0.0 0.0 2.29 F
629 664 0.814812 TCGCCGTTTCCGTTTTTCCT 60.815 50.000 0.00 0.0 0.0 3.36 F
2505 2571 1.066605 TGTCGCCTCTATTAACTCCGC 59.933 52.381 0.00 0.0 0.0 5.54 F
3228 3297 0.482446 ACCTTTCCTGGCCATTCACA 59.518 50.000 5.51 0.0 0.0 3.58 F
4090 4166 0.256752 TGTTACTCCCTCCGATCCGA 59.743 55.000 0.00 0.0 0.0 4.55 F
4785 4862 3.056749 AGGGTTGACGACTTGACACTATC 60.057 47.826 0.00 0.0 0.0 2.08 F
5638 5718 0.550914 ACTCAGGGGTGTGAAAAGCA 59.449 50.000 0.00 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1461 1500 1.804601 AAATTCGGTCGTCCCTTGAC 58.195 50.000 0.00 0.00 38.18 3.18 R
2323 2389 4.631740 TCCGGCACACTCCCTCCA 62.632 66.667 0.00 0.00 0.00 3.86 R
2615 2682 5.936372 TGCTGCATATGGTAGATGAGATTTC 59.064 40.000 4.56 0.00 0.00 2.17 R
3690 3763 1.343069 GACCAGACTCCTCAACAGGT 58.657 55.000 0.00 0.00 41.28 4.00 R
4761 4838 1.116308 TGTCAAGTCGTCAACCCTGA 58.884 50.000 0.00 0.00 0.00 3.86 R
4895 4972 2.028130 TCAACCGCAAAACAATCCACT 58.972 42.857 0.00 0.00 0.00 4.00 R
6408 6519 1.134367 GCTACACGATCTGCTACACCA 59.866 52.381 0.00 0.00 0.00 4.17 R
7501 7640 0.030369 ATCGGGCAGTTATCGACGTC 59.970 55.000 5.18 5.18 35.70 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.909210 GCTTTGCAGCAAGATAAAAGTTTC 58.091 37.500 8.12 0.00 46.49 2.78
30 31 8.491331 TTTGCAGCAAGATAAAAGTTTCTTTT 57.509 26.923 8.12 11.32 29.85 2.27
136 140 1.411041 ACTATACGAAGGACCTGGGC 58.589 55.000 0.00 0.00 0.00 5.36
167 171 4.578928 GCCACATTAATCCGTAACCTGATT 59.421 41.667 0.00 0.00 35.48 2.57
168 172 5.067283 GCCACATTAATCCGTAACCTGATTT 59.933 40.000 0.00 0.00 33.46 2.17
169 173 6.725246 CCACATTAATCCGTAACCTGATTTC 58.275 40.000 0.00 0.00 33.46 2.17
170 174 6.542370 CCACATTAATCCGTAACCTGATTTCT 59.458 38.462 0.00 0.00 33.46 2.52
171 175 7.067008 CCACATTAATCCGTAACCTGATTTCTT 59.933 37.037 0.00 0.00 33.46 2.52
172 176 8.122952 CACATTAATCCGTAACCTGATTTCTTC 58.877 37.037 0.00 0.00 33.46 2.87
288 295 2.544069 CCGCCGTAATCTCCTTCTTCTC 60.544 54.545 0.00 0.00 0.00 2.87
315 335 0.338120 CCTCTCTTCCCACCTCTCCT 59.662 60.000 0.00 0.00 0.00 3.69
318 338 0.041833 CTCTTCCCACCTCTCCTCCA 59.958 60.000 0.00 0.00 0.00 3.86
389 410 2.025510 CAGGGAATTCAGCCTCTTCCTT 60.026 50.000 7.93 0.00 38.77 3.36
452 473 1.795162 GCGCCGTCAGATTTGGAATTG 60.795 52.381 0.00 0.00 0.00 2.32
460 490 4.333649 GTCAGATTTGGAATTGCTCGATGA 59.666 41.667 0.00 0.00 0.00 2.92
470 500 6.753279 TGGAATTGCTCGATGATTTGAAAATC 59.247 34.615 8.53 8.53 43.91 2.17
500 530 7.280205 ACGCGATTTTATCCTGATTAGTTCTTT 59.720 33.333 15.93 0.00 0.00 2.52
533 568 0.970937 TCCAGAGCCGAACCCTACTG 60.971 60.000 0.00 0.00 0.00 2.74
603 638 3.022914 GTTATCGCCGACGCCTCG 61.023 66.667 0.00 0.00 39.84 4.63
611 646 4.609247 CGACGCCTCGATCCGGTC 62.609 72.222 0.00 0.00 43.06 4.79
619 654 3.252484 CGATCCGGTCGCCGTTTC 61.252 66.667 15.38 10.89 46.80 2.78
620 655 2.889018 GATCCGGTCGCCGTTTCC 60.889 66.667 15.38 1.12 46.80 3.13
621 656 4.807039 ATCCGGTCGCCGTTTCCG 62.807 66.667 15.38 10.01 46.80 4.30
624 659 3.340253 CGGTCGCCGTTTCCGTTT 61.340 61.111 9.69 0.00 42.73 3.60
625 660 2.884571 CGGTCGCCGTTTCCGTTTT 61.885 57.895 9.69 0.00 42.73 2.43
626 661 1.356270 GGTCGCCGTTTCCGTTTTT 59.644 52.632 0.00 0.00 0.00 1.94
627 662 0.658244 GGTCGCCGTTTCCGTTTTTC 60.658 55.000 0.00 0.00 0.00 2.29
628 663 0.658244 GTCGCCGTTTCCGTTTTTCC 60.658 55.000 0.00 0.00 0.00 3.13
629 664 0.814812 TCGCCGTTTCCGTTTTTCCT 60.815 50.000 0.00 0.00 0.00 3.36
666 701 2.046023 CTGCCGTCTCCATTGCCA 60.046 61.111 0.00 0.00 0.00 4.92
676 711 4.485163 GTCTCCATTGCCATGTGTTTTAC 58.515 43.478 0.00 0.00 0.00 2.01
685 720 6.072112 TGCCATGTGTTTTACTTTTCTCTC 57.928 37.500 0.00 0.00 0.00 3.20
686 721 5.827797 TGCCATGTGTTTTACTTTTCTCTCT 59.172 36.000 0.00 0.00 0.00 3.10
700 735 8.794335 ACTTTTCTCTCTCTTTGTTTTACTGT 57.206 30.769 0.00 0.00 0.00 3.55
701 736 9.886132 ACTTTTCTCTCTCTTTGTTTTACTGTA 57.114 29.630 0.00 0.00 0.00 2.74
751 786 2.938756 GCTGCTACTGTTCTTCATGCCT 60.939 50.000 0.00 0.00 0.00 4.75
909 944 4.524328 CCTTTTCCTTTGGACACATAGCTT 59.476 41.667 0.00 0.00 0.00 3.74
915 950 6.480763 TCCTTTGGACACATAGCTTGATAAA 58.519 36.000 0.00 0.00 0.00 1.40
988 1023 4.229304 CTGAGAAGTACAGGAGAGGAGA 57.771 50.000 0.00 0.00 0.00 3.71
1123 1158 2.092914 CGCTTAGGTTCTTGGAATCCCT 60.093 50.000 0.00 0.00 0.00 4.20
1262 1297 6.426937 GCATAGTCTTTCTTGTGTTGTTCCTA 59.573 38.462 0.00 0.00 0.00 2.94
1264 1299 6.927294 AGTCTTTCTTGTGTTGTTCCTAAG 57.073 37.500 0.00 0.00 0.00 2.18
1291 1326 8.755696 TTTTCAGCGCTGATGTTTTAAATAAT 57.244 26.923 38.40 0.00 39.64 1.28
1491 1530 5.106436 GGACGACCGAATTTTGTTTTCCTAT 60.106 40.000 0.00 0.00 0.00 2.57
1509 1548 6.266131 TCCTATCTTTGGGCTACATCATTT 57.734 37.500 0.00 0.00 0.00 2.32
1547 1586 7.765360 TCATGTTTTATTGCTCATTTCCAATCC 59.235 33.333 0.00 0.00 33.93 3.01
1693 1732 9.907229 AATCCCTTCAGTTTATTAGGACTTTAG 57.093 33.333 0.00 0.00 0.00 1.85
1949 2011 8.700439 TTTAAAGAAAATGGGCAACTAGTAGT 57.300 30.769 0.00 0.00 0.00 2.73
1991 2053 4.736793 GCTTCGCTCAAACCAATCATATTG 59.263 41.667 0.00 0.00 0.00 1.90
1996 2058 6.095300 TCGCTCAAACCAATCATATTGAACAT 59.905 34.615 1.23 0.00 31.94 2.71
2356 2422 3.512329 TGCCGGAAGTACAGACATTTCTA 59.488 43.478 5.05 0.00 0.00 2.10
2383 2449 6.705825 GCAAACCAATACATTTTCCTTTGTCT 59.294 34.615 0.00 0.00 0.00 3.41
2388 2454 7.891561 CCAATACATTTTCCTTTGTCTTGGTA 58.108 34.615 10.40 0.00 41.53 3.25
2505 2571 1.066605 TGTCGCCTCTATTAACTCCGC 59.933 52.381 0.00 0.00 0.00 5.54
2508 2574 2.128035 CGCCTCTATTAACTCCGCTTG 58.872 52.381 0.00 0.00 0.00 4.01
2522 2588 4.021368 ACTCCGCTTGTCTGTGTACTATTT 60.021 41.667 0.00 0.00 0.00 1.40
2615 2682 7.763985 CCAAGGTAAATATTAGCAAAAAGTGGG 59.236 37.037 2.61 0.00 0.00 4.61
2810 2878 3.596066 TTCGCAGGTGAGCTCCAGC 62.596 63.158 12.15 9.11 43.31 4.85
2814 2882 1.071987 CAGGTGAGCTCCAGCACAA 59.928 57.895 12.15 0.00 45.30 3.33
2836 2904 7.837202 CAATGTTTTGCCATTGTTGATCTAT 57.163 32.000 5.87 0.00 44.24 1.98
2841 2909 5.601583 TTGCCATTGTTGATCTATGCAAT 57.398 34.783 0.00 0.00 32.48 3.56
3081 3149 6.044046 TGATTGGCATCAATTTTCTGTATGC 58.956 36.000 0.00 0.00 43.08 3.14
3228 3297 0.482446 ACCTTTCCTGGCCATTCACA 59.518 50.000 5.51 0.00 0.00 3.58
3252 3321 3.012518 CACTCAAGGAGGCAAATACCAG 58.987 50.000 0.00 0.00 33.35 4.00
3387 3457 5.451354 ACTTGTTTGGGACTAAAGGCTTTA 58.549 37.500 18.11 18.11 0.00 1.85
3438 3511 3.725634 ACTATGGTCAAGCTACTTCCCT 58.274 45.455 0.00 0.00 0.00 4.20
3439 3512 3.452627 ACTATGGTCAAGCTACTTCCCTG 59.547 47.826 0.00 0.00 0.00 4.45
3454 3527 0.790207 CCCTGACACGTGTTCGATTG 59.210 55.000 24.26 8.43 40.62 2.67
3463 3536 4.099120 CACGTGTTCGATTGGTTTTGAAA 58.901 39.130 7.58 0.00 40.62 2.69
3479 3552 5.713792 TTTGAAAACCTGACAAGACACAA 57.286 34.783 0.00 0.00 0.00 3.33
3532 3605 6.039493 TGAAGAGAGATTCGTCCAGTATAACC 59.961 42.308 0.00 0.00 33.90 2.85
3680 3753 0.892755 TTACCGCTAGACACCTGTGG 59.107 55.000 1.91 0.00 37.38 4.17
3690 3763 2.371841 AGACACCTGTGGAAGCATACAA 59.628 45.455 1.91 0.00 34.19 2.41
3985 4059 2.421751 TTGGGTTTGTCACTTTCCGA 57.578 45.000 0.00 0.00 0.00 4.55
3998 4072 0.947180 TTTCCGAAGTGCAGGTACGC 60.947 55.000 0.00 0.00 0.00 4.42
4089 4165 1.329256 ATGTTACTCCCTCCGATCCG 58.671 55.000 0.00 0.00 0.00 4.18
4090 4166 0.256752 TGTTACTCCCTCCGATCCGA 59.743 55.000 0.00 0.00 0.00 4.55
4121 4197 8.848474 ATTTGTATGTACATTGTATAGAGGCC 57.152 34.615 14.77 0.00 35.89 5.19
4156 4232 5.888982 TTGGATCAGGGGAGTATAACTTC 57.111 43.478 0.00 0.00 0.00 3.01
4235 4311 4.308458 TGCTTGTAGTGCCGCCGT 62.308 61.111 0.00 0.00 0.00 5.68
4458 4535 3.137533 GAGGCATGAGCTAGGATTTGAC 58.862 50.000 0.00 0.00 41.70 3.18
4536 4613 6.927381 ACCATTTACCACGAGTAATATAGTGC 59.073 38.462 0.00 0.00 40.62 4.40
4632 4709 6.153851 TGCAAGAAAATCATGAGATTGATGGT 59.846 34.615 0.09 0.00 43.52 3.55
4633 4710 7.039882 GCAAGAAAATCATGAGATTGATGGTT 58.960 34.615 0.09 0.00 43.52 3.67
4729 4806 7.228507 TGGAATACATGTATTATTCTGTGTGCC 59.771 37.037 27.01 19.79 36.54 5.01
4785 4862 3.056749 AGGGTTGACGACTTGACACTATC 60.057 47.826 0.00 0.00 0.00 2.08
4874 4951 8.275187 TCATACCATGATCCTACCAATTTACT 57.725 34.615 0.00 0.00 33.59 2.24
4928 5005 1.302271 GGTTGAACTGGTCCGGGTC 60.302 63.158 9.02 9.02 0.00 4.46
4929 5006 1.448497 GTTGAACTGGTCCGGGTCA 59.552 57.895 14.93 14.93 34.32 4.02
5189 5266 5.008613 TGAAGTTTGACTTTGCTATGTCCAC 59.991 40.000 10.75 8.07 38.80 4.02
5208 5285 6.015856 TGTCCACAACGACCAATTTTATGAAT 60.016 34.615 0.00 0.00 31.35 2.57
5350 5430 7.397892 TTTTCTTGTTTGATGAACCTGTACA 57.602 32.000 0.00 0.00 37.45 2.90
5352 5432 7.397892 TTCTTGTTTGATGAACCTGTACAAA 57.602 32.000 0.00 0.00 37.45 2.83
5637 5717 0.954452 CACTCAGGGGTGTGAAAAGC 59.046 55.000 0.00 0.00 40.14 3.51
5638 5718 0.550914 ACTCAGGGGTGTGAAAAGCA 59.449 50.000 0.00 0.00 0.00 3.91
5639 5719 1.064017 ACTCAGGGGTGTGAAAAGCAA 60.064 47.619 0.00 0.00 0.00 3.91
5640 5720 1.338020 CTCAGGGGTGTGAAAAGCAAC 59.662 52.381 0.00 0.00 0.00 4.17
5641 5721 1.110442 CAGGGGTGTGAAAAGCAACA 58.890 50.000 0.00 0.00 0.00 3.33
5642 5722 1.688197 CAGGGGTGTGAAAAGCAACAT 59.312 47.619 0.00 0.00 0.00 2.71
5643 5723 1.688197 AGGGGTGTGAAAAGCAACATG 59.312 47.619 0.00 0.00 0.00 3.21
5644 5724 1.686052 GGGGTGTGAAAAGCAACATGA 59.314 47.619 0.00 0.00 0.00 3.07
5645 5725 2.299867 GGGGTGTGAAAAGCAACATGAT 59.700 45.455 0.00 0.00 0.00 2.45
5646 5726 3.244181 GGGGTGTGAAAAGCAACATGATT 60.244 43.478 0.00 0.00 0.00 2.57
5647 5727 4.021544 GGGGTGTGAAAAGCAACATGATTA 60.022 41.667 0.00 0.00 0.00 1.75
5648 5728 5.337491 GGGGTGTGAAAAGCAACATGATTAT 60.337 40.000 0.00 0.00 0.00 1.28
5649 5729 6.127479 GGGGTGTGAAAAGCAACATGATTATA 60.127 38.462 0.00 0.00 0.00 0.98
5650 5730 6.751888 GGGTGTGAAAAGCAACATGATTATAC 59.248 38.462 0.00 0.00 0.00 1.47
5651 5731 7.362920 GGGTGTGAAAAGCAACATGATTATACT 60.363 37.037 0.00 0.00 0.00 2.12
5652 5732 7.698130 GGTGTGAAAAGCAACATGATTATACTC 59.302 37.037 0.00 0.00 0.00 2.59
5653 5733 8.236586 GTGTGAAAAGCAACATGATTATACTCA 58.763 33.333 0.00 0.00 0.00 3.41
5654 5734 8.453320 TGTGAAAAGCAACATGATTATACTCAG 58.547 33.333 0.00 0.00 0.00 3.35
5655 5735 7.912250 GTGAAAAGCAACATGATTATACTCAGG 59.088 37.037 0.00 3.48 33.32 3.86
5656 5736 6.949352 AAAGCAACATGATTATACTCAGGG 57.051 37.500 9.21 2.33 31.41 4.45
5657 5737 5.894298 AGCAACATGATTATACTCAGGGA 57.106 39.130 9.21 0.00 31.41 4.20
5658 5738 6.445451 AGCAACATGATTATACTCAGGGAT 57.555 37.500 9.21 0.00 31.41 3.85
5659 5739 6.236409 AGCAACATGATTATACTCAGGGATG 58.764 40.000 9.21 8.42 31.41 3.51
5660 5740 6.000219 GCAACATGATTATACTCAGGGATGT 59.000 40.000 9.21 1.48 31.41 3.06
5661 5741 6.072838 GCAACATGATTATACTCAGGGATGTG 60.073 42.308 9.21 3.70 31.41 3.21
5662 5742 7.219322 CAACATGATTATACTCAGGGATGTGA 58.781 38.462 9.21 0.00 31.41 3.58
5663 5743 7.379059 ACATGATTATACTCAGGGATGTGAA 57.621 36.000 9.21 0.00 31.41 3.18
5664 5744 7.805163 ACATGATTATACTCAGGGATGTGAAA 58.195 34.615 9.21 0.00 31.41 2.69
5665 5745 8.274322 ACATGATTATACTCAGGGATGTGAAAA 58.726 33.333 9.21 0.00 31.41 2.29
5666 5746 8.781196 CATGATTATACTCAGGGATGTGAAAAG 58.219 37.037 0.00 0.00 0.00 2.27
5667 5747 6.767902 TGATTATACTCAGGGATGTGAAAAGC 59.232 38.462 0.00 0.00 0.00 3.51
5668 5748 2.957402 ACTCAGGGATGTGAAAAGCA 57.043 45.000 0.00 0.00 0.00 3.91
5669 5749 3.228188 ACTCAGGGATGTGAAAAGCAA 57.772 42.857 0.00 0.00 0.00 3.91
5670 5750 3.771216 ACTCAGGGATGTGAAAAGCAAT 58.229 40.909 0.00 0.00 0.00 3.56
5671 5751 4.922206 ACTCAGGGATGTGAAAAGCAATA 58.078 39.130 0.00 0.00 0.00 1.90
5672 5752 5.513233 ACTCAGGGATGTGAAAAGCAATAT 58.487 37.500 0.00 0.00 0.00 1.28
5673 5753 5.359009 ACTCAGGGATGTGAAAAGCAATATG 59.641 40.000 0.00 0.00 0.00 1.78
5674 5754 5.508567 TCAGGGATGTGAAAAGCAATATGA 58.491 37.500 0.00 0.00 0.00 2.15
5675 5755 6.131264 TCAGGGATGTGAAAAGCAATATGAT 58.869 36.000 0.00 0.00 0.00 2.45
5676 5756 6.608405 TCAGGGATGTGAAAAGCAATATGATT 59.392 34.615 0.00 0.00 0.00 2.57
5677 5757 7.779326 TCAGGGATGTGAAAAGCAATATGATTA 59.221 33.333 0.00 0.00 0.00 1.75
5678 5758 8.582437 CAGGGATGTGAAAAGCAATATGATTAT 58.418 33.333 0.00 0.00 0.00 1.28
5679 5759 9.812347 AGGGATGTGAAAAGCAATATGATTATA 57.188 29.630 0.00 0.00 0.00 0.98
5680 5760 9.846248 GGGATGTGAAAAGCAATATGATTATAC 57.154 33.333 0.00 0.00 0.00 1.47
5686 5766 9.288576 TGAAAAGCAATATGATTATACTCAGGG 57.711 33.333 0.00 0.00 0.00 4.45
5687 5767 9.507329 GAAAAGCAATATGATTATACTCAGGGA 57.493 33.333 0.00 0.00 0.00 4.20
5689 5769 9.458727 AAAGCAATATGATTATACTCAGGGATG 57.541 33.333 0.00 0.00 0.00 3.51
5690 5770 8.155620 AGCAATATGATTATACTCAGGGATGT 57.844 34.615 0.00 0.00 0.00 3.06
5691 5771 8.045507 AGCAATATGATTATACTCAGGGATGTG 58.954 37.037 0.00 0.00 0.00 3.21
5692 5772 8.043113 GCAATATGATTATACTCAGGGATGTGA 58.957 37.037 0.00 0.00 0.00 3.58
5693 5773 9.948964 CAATATGATTATACTCAGGGATGTGAA 57.051 33.333 0.00 0.00 0.00 3.18
5696 5776 8.915057 ATGATTATACTCAGGGATGTGAAAAG 57.085 34.615 0.00 0.00 0.00 2.27
5807 5918 6.015180 ACATGCACACATTTTGAGATTAGGTT 60.015 34.615 0.00 0.00 32.87 3.50
5812 5923 7.328493 GCACACATTTTGAGATTAGGTTTTACC 59.672 37.037 0.00 0.00 38.99 2.85
5845 5956 7.781056 AGAGAGATAAAGAGATCAAGGACAAC 58.219 38.462 0.00 0.00 0.00 3.32
5866 5977 1.443802 GCTTTGGTAGCCTCACACTC 58.556 55.000 0.00 0.00 44.48 3.51
5980 6091 1.227263 CGAGGGTGGTTATGGCTCG 60.227 63.158 0.00 0.00 0.00 5.03
5983 6094 1.692519 GAGGGTGGTTATGGCTCGTAT 59.307 52.381 0.00 0.00 0.00 3.06
6052 6163 4.141642 CCAACACTGTATGATCATCCTGGA 60.142 45.833 12.53 0.00 0.00 3.86
6190 6301 4.467438 CCCCCTGTATCAAGCAAAAAGATT 59.533 41.667 0.00 0.00 0.00 2.40
6360 6471 3.308545 CCCTAGTGCTATCGTAGGATCCT 60.309 52.174 20.48 20.48 36.19 3.24
6408 6519 5.362430 TGGTTTTGTTACTTTTGCTGAGGAT 59.638 36.000 0.00 0.00 0.00 3.24
6466 6577 1.814429 TTTGGGACAGGAGGTGAGAA 58.186 50.000 0.00 0.00 42.39 2.87
6505 6616 0.319405 GCTCAGCCTGCCAAAAATGT 59.681 50.000 0.00 0.00 0.00 2.71
6575 6686 0.894141 CTGTAGACTCAGCTGCACCT 59.106 55.000 9.47 7.77 0.00 4.00
6619 6730 1.173913 GGTTACATGGAACCACCTGC 58.826 55.000 31.47 5.87 46.97 4.85
6624 6735 4.947147 TGGAACCACCTGCGCCAC 62.947 66.667 4.18 0.00 39.86 5.01
6794 6905 2.608261 CCACTCGCTCTTCGACTTTCTT 60.608 50.000 0.00 0.00 43.16 2.52
6820 6931 0.504384 CACTTGTGAGTTGCGAGACG 59.496 55.000 0.00 0.00 32.54 4.18
6894 7005 3.523606 AGCAGCAGATCAAGAGTACAG 57.476 47.619 0.00 0.00 0.00 2.74
6900 7011 1.478510 AGATCAAGAGTACAGCCACGG 59.521 52.381 0.00 0.00 0.00 4.94
6905 7016 1.624336 AGAGTACAGCCACGGTACAA 58.376 50.000 9.99 0.00 42.73 2.41
6920 7031 2.968675 GTACAAACCGTACTGAGGCAT 58.031 47.619 0.00 0.00 46.01 4.40
6922 7033 2.858745 ACAAACCGTACTGAGGCATTT 58.141 42.857 0.00 0.00 0.00 2.32
6934 7054 2.756760 TGAGGCATTTTCTTGGAGCATC 59.243 45.455 0.00 0.00 36.64 3.91
6937 7057 4.801164 AGGCATTTTCTTGGAGCATCTAT 58.199 39.130 0.00 0.00 33.73 1.98
6951 7074 1.907606 CATCTATGCGACGTGATAGCG 59.092 52.381 0.00 0.00 37.94 4.26
6952 7075 1.223187 TCTATGCGACGTGATAGCGA 58.777 50.000 0.00 0.00 35.59 4.93
6953 7076 1.600485 TCTATGCGACGTGATAGCGAA 59.400 47.619 0.00 0.00 35.59 4.70
6954 7077 1.972640 CTATGCGACGTGATAGCGAAG 59.027 52.381 0.00 0.00 35.59 3.79
6955 7078 0.595053 ATGCGACGTGATAGCGAAGG 60.595 55.000 0.00 0.00 35.59 3.46
6956 7079 1.063649 GCGACGTGATAGCGAAGGA 59.936 57.895 0.00 0.00 35.59 3.36
6957 7080 0.930742 GCGACGTGATAGCGAAGGAG 60.931 60.000 0.00 0.00 35.59 3.69
6958 7081 0.656259 CGACGTGATAGCGAAGGAGA 59.344 55.000 0.00 0.00 35.59 3.71
6959 7082 1.264557 CGACGTGATAGCGAAGGAGAT 59.735 52.381 0.00 0.00 35.59 2.75
6960 7083 2.656085 GACGTGATAGCGAAGGAGATG 58.344 52.381 0.00 0.00 35.59 2.90
6961 7084 1.269309 ACGTGATAGCGAAGGAGATGC 60.269 52.381 0.00 0.00 35.59 3.91
6964 7087 3.669290 CGTGATAGCGAAGGAGATGCTAG 60.669 52.174 0.00 0.00 43.75 3.42
6965 7088 3.254657 GTGATAGCGAAGGAGATGCTAGT 59.745 47.826 0.00 0.00 43.75 2.57
6967 7090 5.124776 GTGATAGCGAAGGAGATGCTAGTAT 59.875 44.000 0.00 0.00 43.75 2.12
6968 7091 3.932545 AGCGAAGGAGATGCTAGTATG 57.067 47.619 0.00 0.00 37.15 2.39
6969 7092 3.491342 AGCGAAGGAGATGCTAGTATGA 58.509 45.455 0.00 0.00 37.15 2.15
6970 7093 3.254657 AGCGAAGGAGATGCTAGTATGAC 59.745 47.826 0.00 0.00 37.15 3.06
7075 7207 4.215965 CGTAACCCTTTTTGTTCATGACG 58.784 43.478 0.00 0.00 0.00 4.35
7111 7243 1.543802 TGTGCCACCGGAAATTTGATC 59.456 47.619 9.46 0.00 0.00 2.92
7120 7252 4.037923 ACCGGAAATTTGATCATATGGTGC 59.962 41.667 9.46 0.00 0.00 5.01
7137 7269 0.390340 TGCGGCAGACTCTGAACATC 60.390 55.000 10.45 0.00 32.44 3.06
7138 7270 0.390340 GCGGCAGACTCTGAACATCA 60.390 55.000 10.45 0.00 32.44 3.07
7152 7284 4.058124 TGAACATCACCGATTATGCTAGC 58.942 43.478 8.10 8.10 0.00 3.42
7153 7285 4.202253 TGAACATCACCGATTATGCTAGCT 60.202 41.667 17.23 4.07 0.00 3.32
7154 7286 3.657634 ACATCACCGATTATGCTAGCTG 58.342 45.455 17.23 3.00 0.00 4.24
7155 7287 2.820059 TCACCGATTATGCTAGCTGG 57.180 50.000 17.23 10.20 0.00 4.85
7156 7288 1.151668 CACCGATTATGCTAGCTGGC 58.848 55.000 16.23 16.23 0.00 4.85
7157 7289 0.758734 ACCGATTATGCTAGCTGGCA 59.241 50.000 27.83 27.83 46.63 4.92
7184 7316 2.571653 AGATGGGTTAGCTGTGCAGTTA 59.428 45.455 0.00 0.00 0.00 2.24
7185 7317 3.200825 AGATGGGTTAGCTGTGCAGTTAT 59.799 43.478 0.00 0.00 0.00 1.89
7186 7318 3.433306 TGGGTTAGCTGTGCAGTTATT 57.567 42.857 0.00 0.00 0.00 1.40
7187 7319 3.761897 TGGGTTAGCTGTGCAGTTATTT 58.238 40.909 0.00 0.00 0.00 1.40
7188 7320 4.148838 TGGGTTAGCTGTGCAGTTATTTT 58.851 39.130 0.00 0.00 0.00 1.82
7189 7321 4.586841 TGGGTTAGCTGTGCAGTTATTTTT 59.413 37.500 0.00 0.00 0.00 1.94
7209 7341 1.310904 TTTTCCGTGTGGTGGTTAGC 58.689 50.000 0.00 0.00 36.30 3.09
7210 7342 0.470766 TTTCCGTGTGGTGGTTAGCT 59.529 50.000 0.00 0.00 36.30 3.32
7211 7343 0.250124 TTCCGTGTGGTGGTTAGCTG 60.250 55.000 0.00 0.00 36.30 4.24
7212 7344 1.070786 CCGTGTGGTGGTTAGCTGT 59.929 57.895 0.00 0.00 0.00 4.40
7213 7345 1.227999 CCGTGTGGTGGTTAGCTGTG 61.228 60.000 0.00 0.00 0.00 3.66
7214 7346 1.841663 CGTGTGGTGGTTAGCTGTGC 61.842 60.000 0.00 0.00 0.00 4.57
7215 7347 0.817634 GTGTGGTGGTTAGCTGTGCA 60.818 55.000 0.00 0.00 0.00 4.57
7216 7348 0.534877 TGTGGTGGTTAGCTGTGCAG 60.535 55.000 0.00 0.00 0.00 4.41
7217 7349 0.535102 GTGGTGGTTAGCTGTGCAGT 60.535 55.000 0.00 0.00 0.00 4.40
7218 7350 0.182537 TGGTGGTTAGCTGTGCAGTT 59.817 50.000 0.00 0.00 0.00 3.16
7219 7351 1.318576 GGTGGTTAGCTGTGCAGTTT 58.681 50.000 0.00 0.00 0.00 2.66
7220 7352 1.681264 GGTGGTTAGCTGTGCAGTTTT 59.319 47.619 0.00 0.00 0.00 2.43
7256 7388 1.623311 GTTGGGCCTATTTGGTTTGCT 59.377 47.619 4.53 0.00 38.35 3.91
7257 7389 1.555967 TGGGCCTATTTGGTTTGCTC 58.444 50.000 4.53 0.00 38.35 4.26
7258 7390 0.455815 GGGCCTATTTGGTTTGCTCG 59.544 55.000 0.84 0.00 38.35 5.03
7259 7391 1.173913 GGCCTATTTGGTTTGCTCGT 58.826 50.000 0.00 0.00 38.35 4.18
7300 7432 1.830408 CAAGGTTCCGGTTGCCCAA 60.830 57.895 0.00 0.00 0.00 4.12
7317 7449 4.080243 TGCCCAAGTTTTATCCGAGGATTA 60.080 41.667 10.19 0.00 36.17 1.75
7319 7451 5.681639 CCCAAGTTTTATCCGAGGATTACT 58.318 41.667 10.19 8.72 36.17 2.24
7320 7452 5.758784 CCCAAGTTTTATCCGAGGATTACTC 59.241 44.000 10.19 0.42 43.02 2.59
7321 7453 6.408206 CCCAAGTTTTATCCGAGGATTACTCT 60.408 42.308 10.19 2.57 44.33 3.24
7322 7454 6.480320 CCAAGTTTTATCCGAGGATTACTCTG 59.520 42.308 10.19 11.02 44.33 3.35
7323 7455 7.265673 CAAGTTTTATCCGAGGATTACTCTGA 58.734 38.462 10.19 0.00 44.33 3.27
7344 7476 1.868469 AAATGCACATGTGTTGCCAC 58.132 45.000 26.01 9.58 42.19 5.01
7377 7509 8.811378 GCAATTACTGAATCAAAGGCTAAATTC 58.189 33.333 8.63 8.63 0.00 2.17
7381 7513 7.765695 ACTGAATCAAAGGCTAAATTCTTCA 57.234 32.000 13.98 7.20 0.00 3.02
7385 7517 7.448161 TGAATCAAAGGCTAAATTCTTCAGACA 59.552 33.333 13.98 0.00 0.00 3.41
7389 7521 8.321353 TCAAAGGCTAAATTCTTCAGACATCTA 58.679 33.333 0.00 0.00 0.00 1.98
7418 7550 0.392706 GCACCCTTCCCTTGGTTTTG 59.607 55.000 0.00 0.00 30.70 2.44
7420 7552 0.639943 ACCCTTCCCTTGGTTTTGGT 59.360 50.000 0.00 0.00 0.00 3.67
7422 7554 2.247897 ACCCTTCCCTTGGTTTTGGTAA 59.752 45.455 0.00 0.00 0.00 2.85
7423 7555 3.310193 CCCTTCCCTTGGTTTTGGTAAA 58.690 45.455 0.00 0.00 0.00 2.01
7424 7556 3.323691 CCCTTCCCTTGGTTTTGGTAAAG 59.676 47.826 0.00 0.00 0.00 1.85
7427 7559 4.252570 TCCCTTGGTTTTGGTAAAGTGA 57.747 40.909 0.00 0.00 0.00 3.41
7438 7577 8.084073 GGTTTTGGTAAAGTGATTTAACCTACC 58.916 37.037 0.00 0.00 32.97 3.18
7450 7589 0.616891 AACCTACCGGGCCTTGTTAG 59.383 55.000 6.32 0.00 39.10 2.34
7451 7590 1.153229 CCTACCGGGCCTTGTTAGC 60.153 63.158 6.32 0.00 0.00 3.09
7452 7591 1.623542 CCTACCGGGCCTTGTTAGCT 61.624 60.000 6.32 0.00 0.00 3.32
7453 7592 0.462047 CTACCGGGCCTTGTTAGCTG 60.462 60.000 6.32 0.00 0.00 4.24
7454 7593 1.196104 TACCGGGCCTTGTTAGCTGT 61.196 55.000 6.32 0.00 0.00 4.40
7455 7594 1.303317 CCGGGCCTTGTTAGCTGTT 60.303 57.895 0.84 0.00 0.00 3.16
7456 7595 0.035820 CCGGGCCTTGTTAGCTGTTA 60.036 55.000 0.84 0.00 0.00 2.41
7457 7596 1.084289 CGGGCCTTGTTAGCTGTTAC 58.916 55.000 0.84 0.00 0.00 2.50
7458 7597 1.460504 GGGCCTTGTTAGCTGTTACC 58.539 55.000 0.84 0.00 0.00 2.85
7459 7598 1.271707 GGGCCTTGTTAGCTGTTACCA 60.272 52.381 0.84 0.00 0.00 3.25
7460 7599 2.620627 GGGCCTTGTTAGCTGTTACCAT 60.621 50.000 0.84 0.00 0.00 3.55
7461 7600 2.683362 GGCCTTGTTAGCTGTTACCATC 59.317 50.000 0.00 0.00 0.00 3.51
7462 7601 3.610911 GCCTTGTTAGCTGTTACCATCT 58.389 45.455 0.00 0.00 0.00 2.90
7463 7602 4.010349 GCCTTGTTAGCTGTTACCATCTT 58.990 43.478 0.00 0.00 0.00 2.40
7464 7603 4.459337 GCCTTGTTAGCTGTTACCATCTTT 59.541 41.667 0.00 0.00 0.00 2.52
7465 7604 5.048013 GCCTTGTTAGCTGTTACCATCTTTT 60.048 40.000 0.00 0.00 0.00 2.27
7476 7615 7.522236 GCTGTTACCATCTTTTCTTAGTTTGCT 60.522 37.037 0.00 0.00 0.00 3.91
7503 7642 3.427161 GCATTGTTGCCTCATAAGGAC 57.573 47.619 0.00 0.00 46.67 3.85
7504 7643 2.223340 GCATTGTTGCCTCATAAGGACG 60.223 50.000 0.00 0.00 46.67 4.79
7505 7644 2.851263 TTGTTGCCTCATAAGGACGT 57.149 45.000 0.00 0.00 46.67 4.34
7506 7645 2.380084 TGTTGCCTCATAAGGACGTC 57.620 50.000 7.13 7.13 46.67 4.34
7508 7647 1.135199 GTTGCCTCATAAGGACGTCGA 60.135 52.381 9.92 0.00 46.67 4.20
7509 7648 1.399714 TGCCTCATAAGGACGTCGAT 58.600 50.000 9.92 3.06 46.67 3.59
7510 7649 2.578786 TGCCTCATAAGGACGTCGATA 58.421 47.619 9.92 5.43 46.67 2.92
7511 7650 2.953648 TGCCTCATAAGGACGTCGATAA 59.046 45.455 9.92 0.00 46.67 1.75
7512 7651 3.243301 TGCCTCATAAGGACGTCGATAAC 60.243 47.826 9.92 0.00 46.67 1.89
7513 7652 3.004524 GCCTCATAAGGACGTCGATAACT 59.995 47.826 9.92 0.00 46.67 2.24
7514 7653 4.537965 CCTCATAAGGACGTCGATAACTG 58.462 47.826 9.92 2.57 46.67 3.16
7515 7654 3.961182 TCATAAGGACGTCGATAACTGC 58.039 45.455 9.92 0.00 0.00 4.40
7516 7655 2.857592 TAAGGACGTCGATAACTGCC 57.142 50.000 9.92 0.00 0.00 4.85
7519 7658 1.430632 GACGTCGATAACTGCCCGA 59.569 57.895 0.00 0.00 0.00 5.14
7520 7659 0.030369 GACGTCGATAACTGCCCGAT 59.970 55.000 0.00 0.00 34.71 4.18
7521 7660 0.248907 ACGTCGATAACTGCCCGATG 60.249 55.000 0.00 0.00 42.87 3.84
7523 7662 1.209128 GTCGATAACTGCCCGATGTG 58.791 55.000 0.00 0.00 34.71 3.21
7525 7664 0.930310 CGATAACTGCCCGATGTGTG 59.070 55.000 0.00 0.00 0.00 3.82
7532 7671 4.952704 CCCGATGTGTGGCATGTA 57.047 55.556 0.00 0.00 38.06 2.29
7534 7673 0.107703 CCCGATGTGTGGCATGTAGT 60.108 55.000 0.00 0.00 38.06 2.73
7535 7674 1.138069 CCCGATGTGTGGCATGTAGTA 59.862 52.381 0.00 0.00 38.06 1.82
7537 7676 2.607635 CCGATGTGTGGCATGTAGTAAC 59.392 50.000 0.00 0.00 38.06 2.50
7539 7678 3.062099 CGATGTGTGGCATGTAGTAACAC 59.938 47.826 0.00 3.40 38.78 3.32
7540 7679 2.773487 TGTGTGGCATGTAGTAACACC 58.227 47.619 12.60 0.00 40.28 4.16
7541 7680 1.730064 GTGTGGCATGTAGTAACACCG 59.270 52.381 0.00 0.00 38.78 4.94
7542 7681 0.725117 GTGGCATGTAGTAACACCGC 59.275 55.000 0.00 0.00 38.78 5.68
7543 7682 2.390427 GGCATGTAGTAACACCGCC 58.610 57.895 5.37 5.37 45.33 6.13
7544 7683 1.093496 GGCATGTAGTAACACCGCCC 61.093 60.000 8.81 0.00 45.56 6.13
7545 7684 0.391927 GCATGTAGTAACACCGCCCA 60.392 55.000 0.00 0.00 38.78 5.36
7546 7685 1.365699 CATGTAGTAACACCGCCCAC 58.634 55.000 0.00 0.00 38.78 4.61
7547 7686 0.978151 ATGTAGTAACACCGCCCACA 59.022 50.000 0.00 0.00 38.78 4.17
7548 7687 0.033781 TGTAGTAACACCGCCCACAC 59.966 55.000 0.00 0.00 0.00 3.82
7549 7688 1.010419 GTAGTAACACCGCCCACACG 61.010 60.000 0.00 0.00 0.00 4.49
7550 7689 1.462731 TAGTAACACCGCCCACACGT 61.463 55.000 0.00 0.00 0.00 4.49
7551 7690 1.888638 GTAACACCGCCCACACGTT 60.889 57.895 0.00 0.00 0.00 3.99
7552 7691 1.153208 TAACACCGCCCACACGTTT 60.153 52.632 0.00 0.00 0.00 3.60
7553 7692 0.747283 TAACACCGCCCACACGTTTT 60.747 50.000 0.00 0.00 0.00 2.43
7554 7693 1.596895 AACACCGCCCACACGTTTTT 61.597 50.000 0.00 0.00 0.00 1.94
7575 7714 7.789273 TTTTTACACTAAAGTTGTCATCCGA 57.211 32.000 0.00 0.00 0.00 4.55
7576 7715 7.789273 TTTTACACTAAAGTTGTCATCCGAA 57.211 32.000 0.00 0.00 0.00 4.30
7577 7716 7.789273 TTTACACTAAAGTTGTCATCCGAAA 57.211 32.000 0.00 0.00 0.00 3.46
7578 7717 7.789273 TTACACTAAAGTTGTCATCCGAAAA 57.211 32.000 0.00 0.00 0.00 2.29
7579 7718 6.687081 ACACTAAAGTTGTCATCCGAAAAA 57.313 33.333 0.00 0.00 0.00 1.94
7616 7755 6.375945 AAAACTGAAATTTGCCATCCAAAC 57.624 33.333 0.00 0.00 45.52 2.93
7617 7756 4.686191 ACTGAAATTTGCCATCCAAACA 57.314 36.364 0.00 0.00 45.52 2.83
7618 7757 4.634199 ACTGAAATTTGCCATCCAAACAG 58.366 39.130 0.00 0.00 45.52 3.16
7619 7758 4.101430 ACTGAAATTTGCCATCCAAACAGT 59.899 37.500 0.00 0.00 45.52 3.55
7620 7759 4.378774 TGAAATTTGCCATCCAAACAGTG 58.621 39.130 0.00 0.00 45.52 3.66
7621 7760 2.460757 ATTTGCCATCCAAACAGTGC 57.539 45.000 0.00 0.00 45.52 4.40
7622 7761 1.412079 TTTGCCATCCAAACAGTGCT 58.588 45.000 0.00 0.00 38.46 4.40
7623 7762 1.412079 TTGCCATCCAAACAGTGCTT 58.588 45.000 0.00 0.00 0.00 3.91
7624 7763 0.961019 TGCCATCCAAACAGTGCTTC 59.039 50.000 0.00 0.00 0.00 3.86
7625 7764 0.961019 GCCATCCAAACAGTGCTTCA 59.039 50.000 0.00 0.00 0.00 3.02
7626 7765 1.336240 GCCATCCAAACAGTGCTTCAC 60.336 52.381 0.00 0.00 34.10 3.18
7627 7766 1.955778 CCATCCAAACAGTGCTTCACA 59.044 47.619 0.00 0.00 36.74 3.58
7628 7767 2.361757 CCATCCAAACAGTGCTTCACAA 59.638 45.455 0.00 0.00 36.74 3.33
7629 7768 3.374745 CATCCAAACAGTGCTTCACAAC 58.625 45.455 0.00 0.00 36.74 3.32
7630 7769 2.722094 TCCAAACAGTGCTTCACAACT 58.278 42.857 0.00 0.00 36.74 3.16
7631 7770 3.879998 TCCAAACAGTGCTTCACAACTA 58.120 40.909 0.00 0.00 36.74 2.24
7632 7771 4.265893 TCCAAACAGTGCTTCACAACTAA 58.734 39.130 0.00 0.00 36.74 2.24
7633 7772 4.702612 TCCAAACAGTGCTTCACAACTAAA 59.297 37.500 0.00 0.00 36.74 1.85
7634 7773 5.184096 TCCAAACAGTGCTTCACAACTAAAA 59.816 36.000 0.00 0.00 36.74 1.52
7635 7774 6.042143 CCAAACAGTGCTTCACAACTAAAAT 58.958 36.000 0.00 0.00 36.74 1.82
7636 7775 6.534793 CCAAACAGTGCTTCACAACTAAAATT 59.465 34.615 0.00 0.00 36.74 1.82
7637 7776 7.393327 CAAACAGTGCTTCACAACTAAAATTG 58.607 34.615 0.00 0.00 36.74 2.32
7638 7777 6.207691 ACAGTGCTTCACAACTAAAATTGT 57.792 33.333 0.00 0.00 43.67 2.71
7639 7778 6.265577 ACAGTGCTTCACAACTAAAATTGTC 58.734 36.000 0.00 0.00 40.89 3.18
7640 7779 6.127758 ACAGTGCTTCACAACTAAAATTGTCA 60.128 34.615 0.00 0.00 40.89 3.58
7641 7780 6.919662 CAGTGCTTCACAACTAAAATTGTCAT 59.080 34.615 0.00 0.00 40.89 3.06
7642 7781 7.113965 CAGTGCTTCACAACTAAAATTGTCATC 59.886 37.037 0.00 0.00 40.89 2.92
7643 7782 6.363357 GTGCTTCACAACTAAAATTGTCATCC 59.637 38.462 0.00 0.00 40.89 3.51
7644 7783 6.040278 TGCTTCACAACTAAAATTGTCATCCA 59.960 34.615 0.00 0.00 40.89 3.41
7645 7784 6.583806 GCTTCACAACTAAAATTGTCATCCAG 59.416 38.462 0.00 0.00 40.89 3.86
7646 7785 7.581213 TTCACAACTAAAATTGTCATCCAGT 57.419 32.000 0.00 0.00 40.89 4.00
7647 7786 7.581213 TCACAACTAAAATTGTCATCCAGTT 57.419 32.000 0.00 0.00 40.89 3.16
7648 7787 7.424803 TCACAACTAAAATTGTCATCCAGTTG 58.575 34.615 9.37 9.37 40.89 3.16
7649 7788 7.346751 ACAACTAAAATTGTCATCCAGTTGT 57.653 32.000 10.50 10.50 45.79 3.32
7652 7791 9.180678 CAACTAAAATTGTCATCCAGTTGTAAC 57.819 33.333 0.00 0.00 37.61 2.50
7653 7792 8.691661 ACTAAAATTGTCATCCAGTTGTAACT 57.308 30.769 0.00 0.00 40.60 2.24
7654 7793 9.787435 ACTAAAATTGTCATCCAGTTGTAACTA 57.213 29.630 0.00 0.00 37.08 2.24
7657 7796 9.965824 AAAATTGTCATCCAGTTGTAACTAAAG 57.034 29.630 0.00 0.00 37.08 1.85
7658 7797 6.554334 TTGTCATCCAGTTGTAACTAAAGC 57.446 37.500 0.00 0.00 37.08 3.51
7659 7798 5.865085 TGTCATCCAGTTGTAACTAAAGCT 58.135 37.500 0.00 0.00 37.08 3.74
7660 7799 5.700832 TGTCATCCAGTTGTAACTAAAGCTG 59.299 40.000 0.00 0.00 37.08 4.24
7661 7800 5.701290 GTCATCCAGTTGTAACTAAAGCTGT 59.299 40.000 0.00 0.00 37.08 4.40
7662 7801 5.932303 TCATCCAGTTGTAACTAAAGCTGTC 59.068 40.000 0.00 0.00 37.08 3.51
7663 7802 5.284861 TCCAGTTGTAACTAAAGCTGTCA 57.715 39.130 0.00 0.00 37.08 3.58
7664 7803 5.865085 TCCAGTTGTAACTAAAGCTGTCAT 58.135 37.500 0.00 0.00 37.08 3.06
7665 7804 5.932303 TCCAGTTGTAACTAAAGCTGTCATC 59.068 40.000 0.00 0.00 37.08 2.92
7666 7805 5.700832 CCAGTTGTAACTAAAGCTGTCATCA 59.299 40.000 0.00 0.00 37.08 3.07
7667 7806 6.204688 CCAGTTGTAACTAAAGCTGTCATCAA 59.795 38.462 0.00 0.00 37.08 2.57
7668 7807 7.255104 CCAGTTGTAACTAAAGCTGTCATCAAA 60.255 37.037 0.00 0.00 37.08 2.69
7669 7808 8.128582 CAGTTGTAACTAAAGCTGTCATCAAAA 58.871 33.333 0.00 0.00 37.08 2.44
7670 7809 8.682710 AGTTGTAACTAAAGCTGTCATCAAAAA 58.317 29.630 0.00 0.00 37.52 1.94
7692 7831 8.649973 AAAAACGTGTAGGCAAAATTATTTCA 57.350 26.923 0.00 0.00 0.00 2.69
7693 7832 8.825667 AAAACGTGTAGGCAAAATTATTTCAT 57.174 26.923 0.00 0.00 0.00 2.57
7694 7833 7.810766 AACGTGTAGGCAAAATTATTTCATG 57.189 32.000 0.00 0.00 0.00 3.07
7695 7834 6.919721 ACGTGTAGGCAAAATTATTTCATGT 58.080 32.000 0.00 0.00 0.00 3.21
7696 7835 7.027161 ACGTGTAGGCAAAATTATTTCATGTC 58.973 34.615 0.00 0.00 0.00 3.06
7697 7836 7.026562 CGTGTAGGCAAAATTATTTCATGTCA 58.973 34.615 0.00 0.00 0.00 3.58
7698 7837 7.008266 CGTGTAGGCAAAATTATTTCATGTCAC 59.992 37.037 0.00 0.00 0.00 3.67
7699 7838 7.812191 GTGTAGGCAAAATTATTTCATGTCACA 59.188 33.333 0.00 0.00 0.00 3.58
7700 7839 8.530311 TGTAGGCAAAATTATTTCATGTCACAT 58.470 29.630 0.00 0.00 0.00 3.21
7701 7840 7.837202 AGGCAAAATTATTTCATGTCACATG 57.163 32.000 11.96 11.96 0.00 3.21
7702 7841 7.388437 AGGCAAAATTATTTCATGTCACATGT 58.612 30.769 17.51 1.05 0.00 3.21
7703 7842 7.332430 AGGCAAAATTATTTCATGTCACATGTG 59.668 33.333 20.18 20.18 0.00 3.21
7704 7843 7.118101 GGCAAAATTATTTCATGTCACATGTGT 59.882 33.333 24.63 3.51 0.00 3.72
7705 7844 7.953173 GCAAAATTATTTCATGTCACATGTGTG 59.047 33.333 24.63 16.03 46.91 3.82
7706 7845 8.436970 CAAAATTATTTCATGTCACATGTGTGG 58.563 33.333 24.63 12.81 45.65 4.17
7707 7846 7.465353 AATTATTTCATGTCACATGTGTGGA 57.535 32.000 24.63 14.71 45.65 4.02
7708 7847 4.771590 ATTTCATGTCACATGTGTGGAC 57.228 40.909 24.63 16.21 45.65 4.02
7709 7848 1.794512 TCATGTCACATGTGTGGACG 58.205 50.000 24.63 11.30 45.65 4.79
7710 7849 1.069978 TCATGTCACATGTGTGGACGT 59.930 47.619 24.63 14.37 45.65 4.34
7711 7850 1.872952 CATGTCACATGTGTGGACGTT 59.127 47.619 24.63 5.80 45.65 3.99
7712 7851 2.892784 TGTCACATGTGTGGACGTTA 57.107 45.000 24.63 0.35 45.65 3.18
7713 7852 3.394674 TGTCACATGTGTGGACGTTAT 57.605 42.857 24.63 0.00 45.65 1.89
7714 7853 3.322369 TGTCACATGTGTGGACGTTATC 58.678 45.455 24.63 5.43 45.65 1.75
7715 7854 3.243907 TGTCACATGTGTGGACGTTATCA 60.244 43.478 24.63 0.00 45.65 2.15
7716 7855 3.932710 GTCACATGTGTGGACGTTATCAT 59.067 43.478 24.63 0.00 45.65 2.45
7717 7856 4.391830 GTCACATGTGTGGACGTTATCATT 59.608 41.667 24.63 0.00 45.65 2.57
7718 7857 5.000591 TCACATGTGTGGACGTTATCATTT 58.999 37.500 24.63 0.00 45.65 2.32
7719 7858 5.088068 CACATGTGTGGACGTTATCATTTG 58.912 41.667 18.03 0.00 42.10 2.32
7720 7859 4.155826 ACATGTGTGGACGTTATCATTTGG 59.844 41.667 0.00 0.00 0.00 3.28
7721 7860 3.078097 TGTGTGGACGTTATCATTTGGG 58.922 45.455 0.00 0.00 0.00 4.12
7722 7861 2.422127 GTGTGGACGTTATCATTTGGGG 59.578 50.000 0.00 0.00 0.00 4.96
7723 7862 2.306219 TGTGGACGTTATCATTTGGGGA 59.694 45.455 0.00 0.00 0.00 4.81
7724 7863 3.244946 TGTGGACGTTATCATTTGGGGAA 60.245 43.478 0.00 0.00 0.00 3.97
7725 7864 3.759618 GTGGACGTTATCATTTGGGGAAA 59.240 43.478 0.00 0.00 0.00 3.13
7726 7865 4.218852 GTGGACGTTATCATTTGGGGAAAA 59.781 41.667 0.00 0.00 0.00 2.29
7727 7866 4.833380 TGGACGTTATCATTTGGGGAAAAA 59.167 37.500 0.00 0.00 0.00 1.94
7743 7882 2.985957 AAAAATGGTTGCAGCACTGT 57.014 40.000 2.05 0.00 0.00 3.55
7744 7883 2.514205 AAAATGGTTGCAGCACTGTC 57.486 45.000 2.05 0.00 0.00 3.51
7745 7884 0.311790 AAATGGTTGCAGCACTGTCG 59.688 50.000 2.05 0.00 0.00 4.35
7746 7885 2.133742 AATGGTTGCAGCACTGTCGC 62.134 55.000 2.05 0.00 0.00 5.19
7747 7886 2.974698 GGTTGCAGCACTGTCGCT 60.975 61.111 2.05 0.00 45.21 4.93
7756 7895 3.045601 AGCACTGTCGCTGATTTTAGT 57.954 42.857 4.36 0.00 41.85 2.24
7757 7896 4.188247 AGCACTGTCGCTGATTTTAGTA 57.812 40.909 4.36 0.00 41.85 1.82
7758 7897 3.927142 AGCACTGTCGCTGATTTTAGTAC 59.073 43.478 4.36 0.00 41.85 2.73
7759 7898 3.678072 GCACTGTCGCTGATTTTAGTACA 59.322 43.478 0.00 0.00 0.00 2.90
7760 7899 4.151689 GCACTGTCGCTGATTTTAGTACAA 59.848 41.667 0.00 0.00 0.00 2.41
7761 7900 5.163854 GCACTGTCGCTGATTTTAGTACAAT 60.164 40.000 0.00 0.00 0.00 2.71
7762 7901 6.243551 CACTGTCGCTGATTTTAGTACAATG 58.756 40.000 0.00 0.00 0.00 2.82
7763 7902 5.932303 ACTGTCGCTGATTTTAGTACAATGT 59.068 36.000 0.00 0.00 0.00 2.71
7764 7903 6.426937 ACTGTCGCTGATTTTAGTACAATGTT 59.573 34.615 0.00 0.00 0.00 2.71
7765 7904 6.598525 TGTCGCTGATTTTAGTACAATGTTG 58.401 36.000 0.00 0.00 0.00 3.33
7766 7905 6.203915 TGTCGCTGATTTTAGTACAATGTTGT 59.796 34.615 3.64 3.64 44.86 3.32
7767 7906 7.385478 TGTCGCTGATTTTAGTACAATGTTGTA 59.615 33.333 1.62 1.62 42.35 2.41
7780 7919 5.985781 ACAATGTTGTACGAAACTAAGCAG 58.014 37.500 0.00 0.00 40.16 4.24
7812 7951 1.909700 AGCACGATTTCACAACCCAT 58.090 45.000 0.00 0.00 0.00 4.00
7816 7955 3.672241 GCACGATTTCACAACCCATTACC 60.672 47.826 0.00 0.00 0.00 2.85
7820 7959 4.157656 CGATTTCACAACCCATTACCATGT 59.842 41.667 0.00 0.00 0.00 3.21
7821 7960 5.650543 GATTTCACAACCCATTACCATGTC 58.349 41.667 0.00 0.00 0.00 3.06
7822 7961 3.797559 TCACAACCCATTACCATGTCA 57.202 42.857 0.00 0.00 0.00 3.58
7823 7962 4.105754 TCACAACCCATTACCATGTCAA 57.894 40.909 0.00 0.00 0.00 3.18
7824 7963 4.474394 TCACAACCCATTACCATGTCAAA 58.526 39.130 0.00 0.00 0.00 2.69
7825 7964 4.279671 TCACAACCCATTACCATGTCAAAC 59.720 41.667 0.00 0.00 0.00 2.93
7826 7965 4.280677 CACAACCCATTACCATGTCAAACT 59.719 41.667 0.00 0.00 0.00 2.66
7827 7966 5.475220 CACAACCCATTACCATGTCAAACTA 59.525 40.000 0.00 0.00 0.00 2.24
7828 7967 5.710099 ACAACCCATTACCATGTCAAACTAG 59.290 40.000 0.00 0.00 0.00 2.57
7829 7968 4.270008 ACCCATTACCATGTCAAACTAGC 58.730 43.478 0.00 0.00 0.00 3.42
7830 7969 3.632145 CCCATTACCATGTCAAACTAGCC 59.368 47.826 0.00 0.00 0.00 3.93
7831 7970 3.632145 CCATTACCATGTCAAACTAGCCC 59.368 47.826 0.00 0.00 0.00 5.19
7832 7971 4.269183 CATTACCATGTCAAACTAGCCCA 58.731 43.478 0.00 0.00 0.00 5.36
7833 7972 2.496899 ACCATGTCAAACTAGCCCAG 57.503 50.000 0.00 0.00 0.00 4.45
7834 7973 1.004745 ACCATGTCAAACTAGCCCAGG 59.995 52.381 0.00 0.00 0.00 4.45
7835 7974 1.004745 CCATGTCAAACTAGCCCAGGT 59.995 52.381 0.00 0.00 0.00 4.00
7836 7975 2.359900 CATGTCAAACTAGCCCAGGTC 58.640 52.381 0.00 0.00 0.00 3.85
7837 7976 1.429930 TGTCAAACTAGCCCAGGTCA 58.570 50.000 0.00 0.00 0.00 4.02
7838 7977 1.771854 TGTCAAACTAGCCCAGGTCAA 59.228 47.619 0.00 0.00 0.00 3.18
7839 7978 2.152016 GTCAAACTAGCCCAGGTCAAC 58.848 52.381 0.00 0.00 0.00 3.18
7840 7979 1.771854 TCAAACTAGCCCAGGTCAACA 59.228 47.619 0.00 0.00 0.00 3.33
7841 7980 2.173782 TCAAACTAGCCCAGGTCAACAA 59.826 45.455 0.00 0.00 0.00 2.83
7842 7981 2.554032 CAAACTAGCCCAGGTCAACAAG 59.446 50.000 0.00 0.00 0.00 3.16
7843 7982 1.435256 ACTAGCCCAGGTCAACAAGT 58.565 50.000 0.00 0.00 0.00 3.16
7844 7983 2.616524 ACTAGCCCAGGTCAACAAGTA 58.383 47.619 0.00 0.00 0.00 2.24
7845 7984 2.302157 ACTAGCCCAGGTCAACAAGTAC 59.698 50.000 0.00 0.00 0.00 2.73
7846 7985 1.435256 AGCCCAGGTCAACAAGTACT 58.565 50.000 0.00 0.00 0.00 2.73
7847 7986 1.348036 AGCCCAGGTCAACAAGTACTC 59.652 52.381 0.00 0.00 0.00 2.59
7848 7987 1.610886 GCCCAGGTCAACAAGTACTCC 60.611 57.143 0.00 0.00 0.00 3.85
7849 7988 1.003233 CCCAGGTCAACAAGTACTCCC 59.997 57.143 0.00 0.00 0.00 4.30
7850 7989 1.978580 CCAGGTCAACAAGTACTCCCT 59.021 52.381 0.00 0.00 0.00 4.20
7851 7990 3.170717 CCAGGTCAACAAGTACTCCCTA 58.829 50.000 0.00 0.00 0.00 3.53
7852 7991 3.581332 CCAGGTCAACAAGTACTCCCTAA 59.419 47.826 0.00 0.00 0.00 2.69
7853 7992 4.041198 CCAGGTCAACAAGTACTCCCTAAA 59.959 45.833 0.00 0.00 0.00 1.85
7854 7993 4.995487 CAGGTCAACAAGTACTCCCTAAAC 59.005 45.833 0.00 0.00 0.00 2.01
7855 7994 4.906060 AGGTCAACAAGTACTCCCTAAACT 59.094 41.667 0.00 0.00 0.00 2.66
7856 7995 6.014840 CAGGTCAACAAGTACTCCCTAAACTA 60.015 42.308 0.00 0.00 0.00 2.24
7857 7996 6.556116 AGGTCAACAAGTACTCCCTAAACTAA 59.444 38.462 0.00 0.00 0.00 2.24
7858 7997 7.237055 AGGTCAACAAGTACTCCCTAAACTAAT 59.763 37.037 0.00 0.00 0.00 1.73
7859 7998 8.534496 GGTCAACAAGTACTCCCTAAACTAATA 58.466 37.037 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 122 0.314302 CGCCCAGGTCCTTCGTATAG 59.686 60.000 0.00 0.00 0.00 1.31
120 124 3.090219 GCGCCCAGGTCCTTCGTAT 62.090 63.158 0.00 0.00 0.00 3.06
167 171 5.525378 GTCTTTGTCAGCAGAAGAAGAAGAA 59.475 40.000 6.90 0.00 32.26 2.52
168 172 5.053145 GTCTTTGTCAGCAGAAGAAGAAGA 58.947 41.667 6.90 0.00 32.26 2.87
169 173 4.213059 GGTCTTTGTCAGCAGAAGAAGAAG 59.787 45.833 6.90 0.00 32.26 2.85
170 174 4.130118 GGTCTTTGTCAGCAGAAGAAGAA 58.870 43.478 6.90 0.00 32.26 2.52
171 175 3.495100 GGGTCTTTGTCAGCAGAAGAAGA 60.495 47.826 2.52 2.52 31.79 2.87
172 176 2.810852 GGGTCTTTGTCAGCAGAAGAAG 59.189 50.000 0.00 0.00 31.79 2.85
288 295 4.821589 GGAAGAGAGGCGCACCGG 62.822 72.222 10.83 0.00 42.76 5.28
389 410 3.206150 GCCTAAATCTCGAATTGCTCCA 58.794 45.455 0.00 0.00 0.00 3.86
452 473 2.710961 CGCGATTTTCAAATCATCGAGC 59.289 45.455 0.00 6.19 43.85 5.03
500 530 4.081476 CGGCTCTGGATGGACATGATATAA 60.081 45.833 0.00 0.00 0.00 0.98
533 568 1.154197 GAAGCAAAGGTACACGGGAC 58.846 55.000 0.00 0.00 0.00 4.46
615 650 0.385098 CGGCGAGGAAAAACGGAAAC 60.385 55.000 0.00 0.00 0.00 2.78
616 651 1.943293 CGGCGAGGAAAAACGGAAA 59.057 52.632 0.00 0.00 0.00 3.13
617 652 3.645286 CGGCGAGGAAAAACGGAA 58.355 55.556 0.00 0.00 0.00 4.30
619 654 3.428282 CCCGGCGAGGAAAAACGG 61.428 66.667 9.30 0.00 45.00 4.44
620 655 3.428282 CCCCGGCGAGGAAAAACG 61.428 66.667 9.30 0.00 45.00 3.60
621 656 2.032987 TCCCCGGCGAGGAAAAAC 59.967 61.111 8.02 0.00 45.00 2.43
622 657 2.032987 GTCCCCGGCGAGGAAAAA 59.967 61.111 13.10 0.00 45.00 1.94
623 658 3.243053 TGTCCCCGGCGAGGAAAA 61.243 61.111 13.10 0.00 45.00 2.29
624 659 4.011517 GTGTCCCCGGCGAGGAAA 62.012 66.667 13.10 3.09 45.00 3.13
653 688 1.167851 AACACATGGCAATGGAGACG 58.832 50.000 5.94 0.00 38.19 4.18
666 701 9.178758 ACAAAGAGAGAGAAAAGTAAAACACAT 57.821 29.630 0.00 0.00 0.00 3.21
685 720 9.279904 CTCGTCTATCTACAGTAAAACAAAGAG 57.720 37.037 0.00 0.00 0.00 2.85
686 721 8.790718 ACTCGTCTATCTACAGTAAAACAAAGA 58.209 33.333 0.00 0.00 0.00 2.52
909 944 1.202952 ACCCGGGTGTTGCTTTTATCA 60.203 47.619 29.69 0.00 0.00 2.15
988 1023 4.760530 TTGAAGCCATGCTATCACTACT 57.239 40.909 0.00 0.00 38.25 2.57
1123 1158 3.459828 TCCTTCTGTATCCACATCCCAA 58.540 45.455 0.00 0.00 33.14 4.12
1262 1297 3.715628 AACATCAGCGCTGAAAAACTT 57.284 38.095 40.83 22.79 43.58 2.66
1264 1299 5.881637 TTAAAACATCAGCGCTGAAAAAC 57.118 34.783 40.83 0.00 43.58 2.43
1311 1346 8.406172 TCAGTTTTCAACATTGCTTAAAGAAC 57.594 30.769 0.00 0.00 0.00 3.01
1324 1359 5.705441 ACAAGAGACAGTTCAGTTTTCAACA 59.295 36.000 0.00 0.00 0.00 3.33
1461 1500 1.804601 AAATTCGGTCGTCCCTTGAC 58.195 50.000 0.00 0.00 38.18 3.18
1474 1513 6.090763 GCCCAAAGATAGGAAAACAAAATTCG 59.909 38.462 0.00 0.00 0.00 3.34
1693 1732 5.053145 CACTGGCCTCAGATAAGATACAAC 58.947 45.833 3.32 0.00 43.49 3.32
1947 2009 7.042456 CGAAGCAATAGCATGTATTAAGTGACT 60.042 37.037 0.00 0.00 45.49 3.41
1948 2010 7.065894 CGAAGCAATAGCATGTATTAAGTGAC 58.934 38.462 0.00 0.00 45.49 3.67
1949 2011 7.177498 CGAAGCAATAGCATGTATTAAGTGA 57.823 36.000 0.00 0.00 45.49 3.41
2248 2313 8.627208 ATCTGACCAATGTTTATATCCACATC 57.373 34.615 1.18 0.00 32.21 3.06
2323 2389 4.631740 TCCGGCACACTCCCTCCA 62.632 66.667 0.00 0.00 0.00 3.86
2356 2422 7.053498 ACAAAGGAAAATGTATTGGTTTGCTT 58.947 30.769 0.00 0.00 42.46 3.91
2383 2449 7.446931 TCATTCAGTTGACTAAAGCATTACCAA 59.553 33.333 0.00 0.00 0.00 3.67
2388 2454 7.750229 TCTTCATTCAGTTGACTAAAGCATT 57.250 32.000 0.00 0.00 0.00 3.56
2522 2588 6.926826 TGCTCAGAGTTAACGACATTCTAAAA 59.073 34.615 0.00 0.00 0.00 1.52
2615 2682 5.936372 TGCTGCATATGGTAGATGAGATTTC 59.064 40.000 4.56 0.00 0.00 2.17
2814 2882 5.813672 GCATAGATCAACAATGGCAAAACAT 59.186 36.000 0.00 0.00 0.00 2.71
2836 2904 9.399797 AGACAAGTTCATATATTGAAGATTGCA 57.600 29.630 15.81 0.00 44.89 4.08
3122 3191 4.400884 TGCAAACGTTGGCTGGAAATATAT 59.599 37.500 27.10 0.00 0.00 0.86
3123 3192 3.759086 TGCAAACGTTGGCTGGAAATATA 59.241 39.130 27.10 1.74 0.00 0.86
3164 3233 8.934507 AATTTGGTGATCTTTAACGTGAAAAA 57.065 26.923 0.00 0.00 0.00 1.94
3200 3269 2.224793 GGCCAGGAAAGGTGTAAAGTCT 60.225 50.000 0.00 0.00 0.00 3.24
3228 3297 4.263905 TGGTATTTGCCTCCTTGAGTGATT 60.264 41.667 0.00 0.00 0.00 2.57
3252 3321 9.657121 CAGTCAAAAGAAAACTAGAACATTCTC 57.343 33.333 0.00 0.00 38.70 2.87
3387 3457 6.036953 CAGGTTTATGCAACAACAACAACAAT 59.963 34.615 12.14 0.00 37.07 2.71
3438 3511 1.942677 AACCAATCGAACACGTGTCA 58.057 45.000 23.61 9.58 0.00 3.58
3439 3512 3.033185 CAAAACCAATCGAACACGTGTC 58.967 45.455 23.61 14.20 0.00 3.67
3454 3527 4.862574 GTGTCTTGTCAGGTTTTCAAAACC 59.137 41.667 22.70 22.70 40.58 3.27
3463 3536 1.956477 GGCATTGTGTCTTGTCAGGTT 59.044 47.619 0.00 0.00 0.00 3.50
3532 3605 8.614469 AGGAAAGTTGTCTCAAAGATTCTTAG 57.386 34.615 0.00 0.00 0.00 2.18
3607 3680 6.726379 TGTCCATCACAATAATCTGGGTTTA 58.274 36.000 0.00 0.00 29.30 2.01
3680 3753 3.674997 TCCTCAACAGGTTGTATGCTTC 58.325 45.455 11.55 0.00 41.28 3.86
3690 3763 1.343069 GACCAGACTCCTCAACAGGT 58.657 55.000 0.00 0.00 41.28 4.00
3747 3820 4.322953 GCATGTGAAAATCCAATTCCACCT 60.323 41.667 0.00 0.00 0.00 4.00
3985 4059 2.019249 TCTATACGCGTACCTGCACTT 58.981 47.619 23.19 5.48 34.15 3.16
4121 4197 5.450412 CCCCTGATCCAAATTAATTGACACG 60.450 44.000 0.39 0.00 41.85 4.49
4156 4232 1.452110 TTGCATCACATGGAAGACCG 58.548 50.000 0.00 0.00 35.60 4.79
4235 4311 3.052414 TCATAGGGGGTCTTGCTGTACTA 60.052 47.826 0.00 0.00 0.00 1.82
4458 4535 5.727434 AGGAATGCAGCTTCCAAATTAAAG 58.273 37.500 18.95 0.00 46.02 1.85
4536 4613 3.744660 AGCTAAACAGGTTGTTGAGGAG 58.255 45.455 8.09 0.71 40.14 3.69
4721 4798 3.389329 AGTATTAGAGATGGGGCACACAG 59.611 47.826 0.00 0.00 0.00 3.66
4761 4838 1.116308 TGTCAAGTCGTCAACCCTGA 58.884 50.000 0.00 0.00 0.00 3.86
4785 4862 5.884792 TCCTTCCTACTTCCTAGACTAAACG 59.115 44.000 0.00 0.00 0.00 3.60
4874 4951 3.492102 ACTTTGCAAGCACTAGAAGGA 57.508 42.857 0.00 0.00 0.00 3.36
4895 4972 2.028130 TCAACCGCAAAACAATCCACT 58.972 42.857 0.00 0.00 0.00 4.00
4928 5005 6.481313 GGATCATGGTACGATTGGATATCATG 59.519 42.308 4.83 0.00 34.00 3.07
4929 5006 6.385176 AGGATCATGGTACGATTGGATATCAT 59.615 38.462 4.83 0.00 0.00 2.45
5189 5266 8.434661 CCTCAAAATTCATAAAATTGGTCGTTG 58.565 33.333 0.00 0.00 0.00 4.10
5509 5589 2.351726 GCGGACCTACATTTGTAAGCAG 59.648 50.000 0.00 0.00 0.00 4.24
5571 5651 3.600388 CCCTTTATAGGATCATGGTCGC 58.400 50.000 0.00 0.00 45.05 5.19
5637 5717 7.219322 TCACATCCCTGAGTATAATCATGTTG 58.781 38.462 2.91 6.40 0.00 3.33
5638 5718 7.379059 TCACATCCCTGAGTATAATCATGTT 57.621 36.000 2.91 0.00 0.00 2.71
5639 5719 7.379059 TTCACATCCCTGAGTATAATCATGT 57.621 36.000 2.91 2.50 0.00 3.21
5640 5720 8.681486 TTTTCACATCCCTGAGTATAATCATG 57.319 34.615 2.91 0.84 0.00 3.07
5641 5721 7.446625 GCTTTTCACATCCCTGAGTATAATCAT 59.553 37.037 2.91 0.00 0.00 2.45
5642 5722 6.767902 GCTTTTCACATCCCTGAGTATAATCA 59.232 38.462 2.46 2.46 0.00 2.57
5643 5723 6.767902 TGCTTTTCACATCCCTGAGTATAATC 59.232 38.462 0.00 0.00 0.00 1.75
5644 5724 6.662755 TGCTTTTCACATCCCTGAGTATAAT 58.337 36.000 0.00 0.00 0.00 1.28
5645 5725 6.061022 TGCTTTTCACATCCCTGAGTATAA 57.939 37.500 0.00 0.00 0.00 0.98
5646 5726 5.692115 TGCTTTTCACATCCCTGAGTATA 57.308 39.130 0.00 0.00 0.00 1.47
5647 5727 4.574674 TGCTTTTCACATCCCTGAGTAT 57.425 40.909 0.00 0.00 0.00 2.12
5648 5728 4.365514 TTGCTTTTCACATCCCTGAGTA 57.634 40.909 0.00 0.00 0.00 2.59
5649 5729 2.957402 TGCTTTTCACATCCCTGAGT 57.043 45.000 0.00 0.00 0.00 3.41
5650 5730 5.591472 TCATATTGCTTTTCACATCCCTGAG 59.409 40.000 0.00 0.00 0.00 3.35
5651 5731 5.508567 TCATATTGCTTTTCACATCCCTGA 58.491 37.500 0.00 0.00 0.00 3.86
5652 5732 5.840243 TCATATTGCTTTTCACATCCCTG 57.160 39.130 0.00 0.00 0.00 4.45
5653 5733 8.716674 ATAATCATATTGCTTTTCACATCCCT 57.283 30.769 0.00 0.00 0.00 4.20
5654 5734 9.846248 GTATAATCATATTGCTTTTCACATCCC 57.154 33.333 0.00 0.00 0.00 3.85
5660 5740 9.288576 CCCTGAGTATAATCATATTGCTTTTCA 57.711 33.333 2.91 0.00 0.00 2.69
5661 5741 9.507329 TCCCTGAGTATAATCATATTGCTTTTC 57.493 33.333 2.91 0.00 0.00 2.29
5663 5743 9.458727 CATCCCTGAGTATAATCATATTGCTTT 57.541 33.333 2.91 0.00 0.00 3.51
5664 5744 8.609483 ACATCCCTGAGTATAATCATATTGCTT 58.391 33.333 2.91 0.00 0.00 3.91
5665 5745 8.045507 CACATCCCTGAGTATAATCATATTGCT 58.954 37.037 2.91 0.00 0.00 3.91
5666 5746 8.043113 TCACATCCCTGAGTATAATCATATTGC 58.957 37.037 2.91 0.00 0.00 3.56
5667 5747 9.948964 TTCACATCCCTGAGTATAATCATATTG 57.051 33.333 2.91 2.85 0.00 1.90
5671 5751 7.446625 GCTTTTCACATCCCTGAGTATAATCAT 59.553 37.037 2.91 0.00 0.00 2.45
5672 5752 6.767902 GCTTTTCACATCCCTGAGTATAATCA 59.232 38.462 2.46 2.46 0.00 2.57
5673 5753 6.767902 TGCTTTTCACATCCCTGAGTATAATC 59.232 38.462 0.00 0.00 0.00 1.75
5674 5754 6.543831 GTGCTTTTCACATCCCTGAGTATAAT 59.456 38.462 0.00 0.00 44.98 1.28
5675 5755 5.880332 GTGCTTTTCACATCCCTGAGTATAA 59.120 40.000 0.00 0.00 44.98 0.98
5676 5756 5.428253 GTGCTTTTCACATCCCTGAGTATA 58.572 41.667 0.00 0.00 44.98 1.47
5677 5757 4.265073 GTGCTTTTCACATCCCTGAGTAT 58.735 43.478 0.00 0.00 44.98 2.12
5678 5758 3.674997 GTGCTTTTCACATCCCTGAGTA 58.325 45.455 0.00 0.00 44.98 2.59
5679 5759 2.508526 GTGCTTTTCACATCCCTGAGT 58.491 47.619 0.00 0.00 44.98 3.41
5691 5771 9.669353 CCATAACACTATAATCATGTGCTTTTC 57.331 33.333 0.00 0.00 35.33 2.29
5692 5772 8.137437 GCCATAACACTATAATCATGTGCTTTT 58.863 33.333 0.00 0.00 35.33 2.27
5693 5773 7.503566 AGCCATAACACTATAATCATGTGCTTT 59.496 33.333 0.00 0.00 35.33 3.51
5694 5774 7.000472 AGCCATAACACTATAATCATGTGCTT 59.000 34.615 0.00 0.00 35.33 3.91
5695 5775 6.537355 AGCCATAACACTATAATCATGTGCT 58.463 36.000 0.00 0.00 35.33 4.40
5696 5776 6.808008 AGCCATAACACTATAATCATGTGC 57.192 37.500 0.00 0.00 35.33 4.57
5866 5977 4.034858 TCGTAAGTGGATAACTAGAGCACG 59.965 45.833 0.00 0.00 38.56 5.34
5980 6091 7.369803 AGCAGCTGTAATGTATGCATTATAC 57.630 36.000 17.66 10.25 45.80 1.47
5983 6094 5.700832 GGTAGCAGCTGTAATGTATGCATTA 59.299 40.000 16.64 11.69 42.96 1.90
6052 6163 5.248477 TCAAGACTTACTTCCATAAGCTGGT 59.752 40.000 0.00 0.00 46.08 4.00
6115 6226 6.572167 TGATGCAACATTCAGTAACAATCA 57.428 33.333 0.00 0.00 0.00 2.57
6130 6241 4.427312 CTCCTAGCCAATTTTGATGCAAC 58.573 43.478 0.00 0.00 0.00 4.17
6190 6301 6.442541 TCTTGTGGGAGTCTACCAATAAAA 57.557 37.500 4.98 0.00 40.24 1.52
6360 6471 3.975246 CGGTGGCCGCTCTTTTTA 58.025 55.556 17.49 0.00 41.17 1.52
6408 6519 1.134367 GCTACACGATCTGCTACACCA 59.866 52.381 0.00 0.00 0.00 4.17
6505 6616 8.270030 AGATCAATGAATTAATCTCCACACTGA 58.730 33.333 0.00 0.00 0.00 3.41
6619 6730 2.387309 CTGTAAGCTCCATGTGGCG 58.613 57.895 0.00 0.00 34.44 5.69
6761 6872 5.416271 AGAGCGAGTGGGAAACTAATTTA 57.584 39.130 0.00 0.00 40.07 1.40
6794 6905 4.565022 TCGCAACTCACAAGTGATAATCA 58.435 39.130 3.01 0.00 39.13 2.57
6820 6931 5.147162 CGTGAGAAAGATTTGTTAGCCAAC 58.853 41.667 0.00 0.00 31.20 3.77
6905 7016 3.418684 AGAAAATGCCTCAGTACGGTT 57.581 42.857 0.00 0.00 0.00 4.44
6909 7020 3.127721 GCTCCAAGAAAATGCCTCAGTAC 59.872 47.826 0.00 0.00 0.00 2.73
6934 7054 1.972640 CTTCGCTATCACGTCGCATAG 59.027 52.381 7.24 7.24 0.00 2.23
6937 7057 1.226575 CCTTCGCTATCACGTCGCA 60.227 57.895 0.00 0.00 0.00 5.10
6943 7063 2.810439 AGCATCTCCTTCGCTATCAC 57.190 50.000 0.00 0.00 33.25 3.06
6951 7074 5.244851 TCATGGTCATACTAGCATCTCCTTC 59.755 44.000 0.00 0.00 35.46 3.46
6952 7075 5.150715 TCATGGTCATACTAGCATCTCCTT 58.849 41.667 0.00 0.00 35.46 3.36
6953 7076 4.745351 TCATGGTCATACTAGCATCTCCT 58.255 43.478 0.00 0.00 35.46 3.69
6954 7077 5.674052 ATCATGGTCATACTAGCATCTCC 57.326 43.478 0.00 0.00 35.46 3.71
6955 7078 7.121907 TCACTATCATGGTCATACTAGCATCTC 59.878 40.741 0.00 0.00 35.46 2.75
6956 7079 6.950619 TCACTATCATGGTCATACTAGCATCT 59.049 38.462 0.00 0.00 35.46 2.90
6957 7080 7.163001 TCACTATCATGGTCATACTAGCATC 57.837 40.000 0.00 0.00 35.46 3.91
6958 7081 7.544804 TTCACTATCATGGTCATACTAGCAT 57.455 36.000 0.00 0.00 38.07 3.79
6959 7082 6.976934 TTCACTATCATGGTCATACTAGCA 57.023 37.500 0.00 0.00 0.00 3.49
6960 7083 8.662781 TTTTTCACTATCATGGTCATACTAGC 57.337 34.615 0.00 0.00 0.00 3.42
7075 7207 5.807011 GGTGGCACATGAATACAGAAAAATC 59.193 40.000 20.82 0.00 44.52 2.17
7111 7243 0.105593 AGAGTCTGCCGCACCATATG 59.894 55.000 0.00 0.00 0.00 1.78
7120 7252 1.354040 GTGATGTTCAGAGTCTGCCG 58.646 55.000 15.72 0.00 0.00 5.69
7137 7269 1.151668 GCCAGCTAGCATAATCGGTG 58.848 55.000 18.83 3.29 0.00 4.94
7138 7270 0.758734 TGCCAGCTAGCATAATCGGT 59.241 50.000 18.83 0.00 38.00 4.69
7152 7284 2.439701 CCCATCTGCCAGTGCCAG 60.440 66.667 0.00 0.00 36.33 4.85
7153 7285 1.496444 TAACCCATCTGCCAGTGCCA 61.496 55.000 0.00 0.00 36.33 4.92
7154 7286 0.749454 CTAACCCATCTGCCAGTGCC 60.749 60.000 0.00 0.00 36.33 5.01
7155 7287 1.379642 GCTAACCCATCTGCCAGTGC 61.380 60.000 0.00 0.00 38.26 4.40
7156 7288 0.254178 AGCTAACCCATCTGCCAGTG 59.746 55.000 0.00 0.00 0.00 3.66
7157 7289 0.254178 CAGCTAACCCATCTGCCAGT 59.746 55.000 0.00 0.00 0.00 4.00
7166 7298 3.433306 AATAACTGCACAGCTAACCCA 57.567 42.857 0.00 0.00 0.00 4.51
7189 7321 1.677052 GCTAACCACCACACGGAAAAA 59.323 47.619 0.00 0.00 35.59 1.94
7190 7322 1.134037 AGCTAACCACCACACGGAAAA 60.134 47.619 0.00 0.00 35.59 2.29
7191 7323 0.470766 AGCTAACCACCACACGGAAA 59.529 50.000 0.00 0.00 35.59 3.13
7192 7324 0.250124 CAGCTAACCACCACACGGAA 60.250 55.000 0.00 0.00 35.59 4.30
7193 7325 1.369692 CAGCTAACCACCACACGGA 59.630 57.895 0.00 0.00 35.59 4.69
7194 7326 1.070786 ACAGCTAACCACCACACGG 59.929 57.895 0.00 0.00 38.77 4.94
7195 7327 1.841663 GCACAGCTAACCACCACACG 61.842 60.000 0.00 0.00 0.00 4.49
7196 7328 0.817634 TGCACAGCTAACCACCACAC 60.818 55.000 0.00 0.00 0.00 3.82
7197 7329 0.534877 CTGCACAGCTAACCACCACA 60.535 55.000 0.00 0.00 0.00 4.17
7198 7330 0.535102 ACTGCACAGCTAACCACCAC 60.535 55.000 0.00 0.00 0.00 4.16
7199 7331 0.182537 AACTGCACAGCTAACCACCA 59.817 50.000 0.00 0.00 0.00 4.17
7200 7332 1.318576 AAACTGCACAGCTAACCACC 58.681 50.000 0.00 0.00 0.00 4.61
7201 7333 4.766404 ATAAAACTGCACAGCTAACCAC 57.234 40.909 0.00 0.00 0.00 4.16
7202 7334 5.106869 CGTAATAAAACTGCACAGCTAACCA 60.107 40.000 0.00 0.00 0.00 3.67
7203 7335 5.106830 ACGTAATAAAACTGCACAGCTAACC 60.107 40.000 0.00 0.00 0.00 2.85
7204 7336 5.923665 ACGTAATAAAACTGCACAGCTAAC 58.076 37.500 0.00 0.00 0.00 2.34
7205 7337 6.548441 AACGTAATAAAACTGCACAGCTAA 57.452 33.333 0.00 0.00 0.00 3.09
7206 7338 6.548441 AAACGTAATAAAACTGCACAGCTA 57.452 33.333 0.00 0.00 0.00 3.32
7207 7339 5.432885 AAACGTAATAAAACTGCACAGCT 57.567 34.783 0.00 0.00 0.00 4.24
7208 7340 6.197468 TGAAAAACGTAATAAAACTGCACAGC 59.803 34.615 0.00 0.00 0.00 4.40
7209 7341 7.565073 GCTGAAAAACGTAATAAAACTGCACAG 60.565 37.037 0.00 0.00 0.00 3.66
7210 7342 6.197468 GCTGAAAAACGTAATAAAACTGCACA 59.803 34.615 0.00 0.00 0.00 4.57
7211 7343 6.568939 GCTGAAAAACGTAATAAAACTGCAC 58.431 36.000 0.00 0.00 0.00 4.57
7212 7344 5.396947 CGCTGAAAAACGTAATAAAACTGCA 59.603 36.000 0.00 0.00 0.00 4.41
7213 7345 5.397240 ACGCTGAAAAACGTAATAAAACTGC 59.603 36.000 0.00 0.00 41.48 4.40
7214 7346 6.963017 ACGCTGAAAAACGTAATAAAACTG 57.037 33.333 0.00 0.00 41.48 3.16
7215 7347 6.415573 CCAACGCTGAAAAACGTAATAAAACT 59.584 34.615 0.00 0.00 42.68 2.66
7216 7348 6.345172 CCCAACGCTGAAAAACGTAATAAAAC 60.345 38.462 0.00 0.00 42.68 2.43
7217 7349 5.686397 CCCAACGCTGAAAAACGTAATAAAA 59.314 36.000 0.00 0.00 42.68 1.52
7218 7350 5.213675 CCCAACGCTGAAAAACGTAATAAA 58.786 37.500 0.00 0.00 42.68 1.40
7219 7351 4.785417 CCCAACGCTGAAAAACGTAATAA 58.215 39.130 0.00 0.00 42.68 1.40
7220 7352 3.365164 GCCCAACGCTGAAAAACGTAATA 60.365 43.478 0.00 0.00 42.68 0.98
7256 7388 2.702261 CCGAATTTACCCAAGGAACGA 58.298 47.619 0.00 0.00 0.00 3.85
7257 7389 1.131693 GCCGAATTTACCCAAGGAACG 59.868 52.381 0.00 0.00 0.00 3.95
7258 7390 2.443416 AGCCGAATTTACCCAAGGAAC 58.557 47.619 0.00 0.00 0.00 3.62
7259 7391 2.891191 AGCCGAATTTACCCAAGGAA 57.109 45.000 0.00 0.00 0.00 3.36
7300 7432 7.419711 TTCAGAGTAATCCTCGGATAAAACT 57.580 36.000 0.00 3.93 42.79 2.66
7317 7449 4.924305 ACACATGTGCATTTTTCAGAGT 57.076 36.364 25.68 0.00 0.00 3.24
7319 7451 3.803231 GCAACACATGTGCATTTTTCAGA 59.197 39.130 25.68 0.00 0.00 3.27
7320 7452 3.059461 GGCAACACATGTGCATTTTTCAG 60.059 43.478 25.68 6.26 0.00 3.02
7321 7453 2.871022 GGCAACACATGTGCATTTTTCA 59.129 40.909 25.68 0.00 0.00 2.69
7322 7454 2.871022 TGGCAACACATGTGCATTTTTC 59.129 40.909 25.68 6.87 46.17 2.29
7323 7455 2.915349 TGGCAACACATGTGCATTTTT 58.085 38.095 25.68 9.24 46.17 1.94
7344 7476 5.840243 TTGATTCAGTAATTGCCAGATGG 57.160 39.130 0.00 0.00 38.53 3.51
7356 7488 8.862325 TGAAGAATTTAGCCTTTGATTCAGTA 57.138 30.769 0.00 0.00 32.35 2.74
7377 7509 2.346847 GCGTTGCAGTAGATGTCTGAAG 59.653 50.000 0.00 0.00 35.20 3.02
7378 7510 2.337583 GCGTTGCAGTAGATGTCTGAA 58.662 47.619 0.00 0.00 35.20 3.02
7379 7511 1.732405 CGCGTTGCAGTAGATGTCTGA 60.732 52.381 0.00 0.00 35.20 3.27
7380 7512 0.642291 CGCGTTGCAGTAGATGTCTG 59.358 55.000 0.00 0.00 36.18 3.51
7381 7513 1.078759 GCGCGTTGCAGTAGATGTCT 61.079 55.000 8.43 0.00 45.45 3.41
7418 7550 4.877823 CCCGGTAGGTTAAATCACTTTACC 59.122 45.833 0.00 0.00 35.12 2.85
7420 7552 4.516323 GCCCGGTAGGTTAAATCACTTTA 58.484 43.478 0.00 0.00 38.26 1.85
7422 7554 2.356432 GGCCCGGTAGGTTAAATCACTT 60.356 50.000 0.00 0.00 38.26 3.16
7423 7555 1.211212 GGCCCGGTAGGTTAAATCACT 59.789 52.381 0.00 0.00 38.26 3.41
7424 7556 1.211212 AGGCCCGGTAGGTTAAATCAC 59.789 52.381 0.00 0.00 38.26 3.06
7427 7559 1.637035 ACAAGGCCCGGTAGGTTAAAT 59.363 47.619 0.00 0.00 38.26 1.40
7438 7577 1.084289 GTAACAGCTAACAAGGCCCG 58.916 55.000 0.00 0.00 0.00 6.13
7453 7592 7.649057 ACAGCAAACTAAGAAAAGATGGTAAC 58.351 34.615 0.00 0.00 0.00 2.50
7454 7593 7.817418 ACAGCAAACTAAGAAAAGATGGTAA 57.183 32.000 0.00 0.00 0.00 2.85
7455 7594 7.648142 CAACAGCAAACTAAGAAAAGATGGTA 58.352 34.615 0.00 0.00 0.00 3.25
7456 7595 6.507023 CAACAGCAAACTAAGAAAAGATGGT 58.493 36.000 0.00 0.00 0.00 3.55
7457 7596 5.403466 GCAACAGCAAACTAAGAAAAGATGG 59.597 40.000 0.00 0.00 0.00 3.51
7458 7597 5.978919 TGCAACAGCAAACTAAGAAAAGATG 59.021 36.000 0.00 0.00 34.85 2.90
7459 7598 6.147864 TGCAACAGCAAACTAAGAAAAGAT 57.852 33.333 0.00 0.00 34.85 2.40
7460 7599 5.574891 TGCAACAGCAAACTAAGAAAAGA 57.425 34.783 0.00 0.00 34.85 2.52
7461 7600 5.878261 CTGCAACAGCAAACTAAGAAAAG 57.122 39.130 0.00 0.00 37.91 2.27
7487 7626 1.403647 CGACGTCCTTATGAGGCAACA 60.404 52.381 10.58 0.00 43.21 3.33
7494 7633 3.243301 GGCAGTTATCGACGTCCTTATGA 60.243 47.826 10.58 0.76 0.00 2.15
7496 7635 2.035576 GGGCAGTTATCGACGTCCTTAT 59.964 50.000 10.58 4.01 0.00 1.73
7497 7636 1.406539 GGGCAGTTATCGACGTCCTTA 59.593 52.381 10.58 0.00 0.00 2.69
7500 7639 1.588139 CGGGCAGTTATCGACGTCC 60.588 63.158 10.58 0.00 0.00 4.79
7501 7640 0.030369 ATCGGGCAGTTATCGACGTC 59.970 55.000 5.18 5.18 35.70 4.34
7503 7642 0.248907 ACATCGGGCAGTTATCGACG 60.249 55.000 0.00 0.00 35.70 5.12
7504 7643 1.209128 CACATCGGGCAGTTATCGAC 58.791 55.000 0.00 0.00 35.70 4.20
7505 7644 0.821517 ACACATCGGGCAGTTATCGA 59.178 50.000 0.00 0.00 37.33 3.59
7506 7645 0.930310 CACACATCGGGCAGTTATCG 59.070 55.000 0.00 0.00 0.00 2.92
7508 7647 3.476740 CCACACATCGGGCAGTTAT 57.523 52.632 0.00 0.00 0.00 1.89
7515 7654 0.107703 ACTACATGCCACACATCGGG 60.108 55.000 0.00 0.00 36.64 5.14
7516 7655 2.595124 TACTACATGCCACACATCGG 57.405 50.000 0.00 0.00 36.64 4.18
7519 7658 3.343617 GGTGTTACTACATGCCACACAT 58.656 45.455 12.69 0.00 39.65 3.21
7520 7659 2.773487 GGTGTTACTACATGCCACACA 58.227 47.619 12.69 0.21 39.65 3.72
7521 7660 1.730064 CGGTGTTACTACATGCCACAC 59.270 52.381 0.00 0.00 36.50 3.82
7523 7662 0.725117 GCGGTGTTACTACATGCCAC 59.275 55.000 0.00 0.00 36.50 5.01
7525 7664 2.390427 GGCGGTGTTACTACATGCC 58.610 57.895 8.19 8.19 45.34 4.40
7528 7667 0.978151 TGTGGGCGGTGTTACTACAT 59.022 50.000 0.00 0.00 36.50 2.29
7529 7668 0.033781 GTGTGGGCGGTGTTACTACA 59.966 55.000 0.00 0.00 0.00 2.74
7530 7669 1.010419 CGTGTGGGCGGTGTTACTAC 61.010 60.000 0.00 0.00 0.00 2.73
7531 7670 1.289694 CGTGTGGGCGGTGTTACTA 59.710 57.895 0.00 0.00 0.00 1.82
7532 7671 2.029964 CGTGTGGGCGGTGTTACT 59.970 61.111 0.00 0.00 0.00 2.24
7534 7673 0.747283 AAAACGTGTGGGCGGTGTTA 60.747 50.000 0.00 0.00 35.98 2.41
7535 7674 1.596895 AAAAACGTGTGGGCGGTGTT 61.597 50.000 0.00 0.00 35.98 3.32
7537 7676 2.802106 AAAAACGTGTGGGCGGTG 59.198 55.556 0.00 0.00 35.98 4.94
7551 7690 7.789273 TCGGATGACAACTTTAGTGTAAAAA 57.211 32.000 0.00 0.00 0.00 1.94
7552 7691 7.789273 TTCGGATGACAACTTTAGTGTAAAA 57.211 32.000 0.00 0.00 0.00 1.52
7553 7692 7.789273 TTTCGGATGACAACTTTAGTGTAAA 57.211 32.000 0.00 0.00 0.00 2.01
7554 7693 7.789273 TTTTCGGATGACAACTTTAGTGTAA 57.211 32.000 0.00 0.00 0.00 2.41
7555 7694 7.789273 TTTTTCGGATGACAACTTTAGTGTA 57.211 32.000 0.00 0.00 0.00 2.90
7556 7695 6.687081 TTTTTCGGATGACAACTTTAGTGT 57.313 33.333 0.00 0.00 0.00 3.55
7592 7731 6.376581 TGTTTGGATGGCAAATTTCAGTTTTT 59.623 30.769 0.00 0.00 0.00 1.94
7593 7732 5.884792 TGTTTGGATGGCAAATTTCAGTTTT 59.115 32.000 0.00 0.00 0.00 2.43
7594 7733 5.435291 TGTTTGGATGGCAAATTTCAGTTT 58.565 33.333 0.00 0.00 0.00 2.66
7595 7734 5.033589 TGTTTGGATGGCAAATTTCAGTT 57.966 34.783 0.00 0.00 0.00 3.16
7596 7735 4.101430 ACTGTTTGGATGGCAAATTTCAGT 59.899 37.500 0.00 0.00 0.00 3.41
7597 7736 4.449743 CACTGTTTGGATGGCAAATTTCAG 59.550 41.667 0.00 0.00 0.00 3.02
7598 7737 4.378774 CACTGTTTGGATGGCAAATTTCA 58.621 39.130 0.00 0.00 0.00 2.69
7599 7738 3.187022 GCACTGTTTGGATGGCAAATTTC 59.813 43.478 0.00 0.00 0.00 2.17
7600 7739 3.140623 GCACTGTTTGGATGGCAAATTT 58.859 40.909 0.00 0.00 0.00 1.82
7601 7740 2.369532 AGCACTGTTTGGATGGCAAATT 59.630 40.909 0.00 0.00 0.00 1.82
7602 7741 1.972795 AGCACTGTTTGGATGGCAAAT 59.027 42.857 0.00 0.00 0.00 2.32
7603 7742 1.412079 AGCACTGTTTGGATGGCAAA 58.588 45.000 0.00 0.00 0.00 3.68
7604 7743 1.340889 GAAGCACTGTTTGGATGGCAA 59.659 47.619 0.00 0.00 0.00 4.52
7605 7744 0.961019 GAAGCACTGTTTGGATGGCA 59.039 50.000 0.00 0.00 0.00 4.92
7606 7745 0.961019 TGAAGCACTGTTTGGATGGC 59.039 50.000 0.00 0.00 0.00 4.40
7607 7746 1.955778 TGTGAAGCACTGTTTGGATGG 59.044 47.619 0.00 0.00 35.11 3.51
7608 7747 3.067180 AGTTGTGAAGCACTGTTTGGATG 59.933 43.478 0.00 0.00 35.11 3.51
7609 7748 3.290710 AGTTGTGAAGCACTGTTTGGAT 58.709 40.909 0.00 0.00 35.11 3.41
7610 7749 2.722094 AGTTGTGAAGCACTGTTTGGA 58.278 42.857 0.00 0.00 35.11 3.53
7611 7750 4.630894 TTAGTTGTGAAGCACTGTTTGG 57.369 40.909 0.00 0.00 35.11 3.28
7612 7751 7.063308 ACAATTTTAGTTGTGAAGCACTGTTTG 59.937 33.333 0.00 0.00 40.60 2.93
7613 7752 7.096551 ACAATTTTAGTTGTGAAGCACTGTTT 58.903 30.769 0.00 0.00 40.60 2.83
7614 7753 6.630071 ACAATTTTAGTTGTGAAGCACTGTT 58.370 32.000 0.00 0.00 40.60 3.16
7615 7754 6.127758 TGACAATTTTAGTTGTGAAGCACTGT 60.128 34.615 0.00 0.00 42.08 3.55
7616 7755 6.264832 TGACAATTTTAGTTGTGAAGCACTG 58.735 36.000 0.00 0.00 42.08 3.66
7617 7756 6.449635 TGACAATTTTAGTTGTGAAGCACT 57.550 33.333 0.00 0.00 42.08 4.40
7618 7757 6.363357 GGATGACAATTTTAGTTGTGAAGCAC 59.637 38.462 0.00 0.00 42.08 4.40
7619 7758 6.040278 TGGATGACAATTTTAGTTGTGAAGCA 59.960 34.615 0.00 0.00 42.08 3.91
7620 7759 6.446318 TGGATGACAATTTTAGTTGTGAAGC 58.554 36.000 0.00 0.00 42.08 3.86
7621 7760 7.651808 ACTGGATGACAATTTTAGTTGTGAAG 58.348 34.615 0.00 0.00 42.08 3.02
7622 7761 7.581213 ACTGGATGACAATTTTAGTTGTGAA 57.419 32.000 0.00 0.00 42.08 3.18
7623 7762 7.424803 CAACTGGATGACAATTTTAGTTGTGA 58.575 34.615 0.00 0.00 42.08 3.58
7624 7763 7.627585 CAACTGGATGACAATTTTAGTTGTG 57.372 36.000 0.00 0.00 42.08 3.33
7625 7764 7.346751 ACAACTGGATGACAATTTTAGTTGT 57.653 32.000 12.48 12.48 46.79 3.32
7626 7765 9.180678 GTTACAACTGGATGACAATTTTAGTTG 57.819 33.333 11.37 11.37 45.31 3.16
7627 7766 9.131791 AGTTACAACTGGATGACAATTTTAGTT 57.868 29.630 0.00 0.00 37.98 2.24
7628 7767 8.691661 AGTTACAACTGGATGACAATTTTAGT 57.308 30.769 0.00 0.00 37.98 2.24
7631 7770 9.965824 CTTTAGTTACAACTGGATGACAATTTT 57.034 29.630 4.86 0.00 40.07 1.82
7632 7771 8.082242 GCTTTAGTTACAACTGGATGACAATTT 58.918 33.333 4.86 0.00 40.07 1.82
7633 7772 7.448469 AGCTTTAGTTACAACTGGATGACAATT 59.552 33.333 4.86 0.00 40.07 2.32
7634 7773 6.942576 AGCTTTAGTTACAACTGGATGACAAT 59.057 34.615 4.86 0.00 40.07 2.71
7635 7774 6.204688 CAGCTTTAGTTACAACTGGATGACAA 59.795 38.462 4.86 0.00 40.07 3.18
7636 7775 5.700832 CAGCTTTAGTTACAACTGGATGACA 59.299 40.000 4.86 0.00 40.07 3.58
7637 7776 5.701290 ACAGCTTTAGTTACAACTGGATGAC 59.299 40.000 4.86 0.00 40.07 3.06
7638 7777 5.865085 ACAGCTTTAGTTACAACTGGATGA 58.135 37.500 4.86 0.00 40.07 2.92
7639 7778 5.700832 TGACAGCTTTAGTTACAACTGGATG 59.299 40.000 4.86 6.58 40.07 3.51
7640 7779 5.865085 TGACAGCTTTAGTTACAACTGGAT 58.135 37.500 4.86 0.00 40.07 3.41
7641 7780 5.284861 TGACAGCTTTAGTTACAACTGGA 57.715 39.130 4.86 0.00 40.07 3.86
7642 7781 5.700832 TGATGACAGCTTTAGTTACAACTGG 59.299 40.000 4.86 0.00 40.07 4.00
7643 7782 6.785488 TGATGACAGCTTTAGTTACAACTG 57.215 37.500 4.86 0.00 40.07 3.16
7644 7783 7.801716 TTTGATGACAGCTTTAGTTACAACT 57.198 32.000 0.00 0.00 42.91 3.16
7645 7784 8.850454 TTTTTGATGACAGCTTTAGTTACAAC 57.150 30.769 0.00 0.00 0.00 3.32
7667 7806 8.649973 TGAAATAATTTTGCCTACACGTTTTT 57.350 26.923 0.00 0.00 0.00 1.94
7668 7807 8.707839 CATGAAATAATTTTGCCTACACGTTTT 58.292 29.630 0.00 0.00 0.00 2.43
7669 7808 7.870445 ACATGAAATAATTTTGCCTACACGTTT 59.130 29.630 0.00 0.00 0.00 3.60
7670 7809 7.375053 ACATGAAATAATTTTGCCTACACGTT 58.625 30.769 0.00 0.00 0.00 3.99
7671 7810 6.919721 ACATGAAATAATTTTGCCTACACGT 58.080 32.000 0.00 0.00 0.00 4.49
7672 7811 7.008266 GTGACATGAAATAATTTTGCCTACACG 59.992 37.037 0.00 0.00 0.00 4.49
7673 7812 7.812191 TGTGACATGAAATAATTTTGCCTACAC 59.188 33.333 0.00 0.00 0.00 2.90
7674 7813 7.890515 TGTGACATGAAATAATTTTGCCTACA 58.109 30.769 0.00 0.00 0.00 2.74
7675 7814 8.810427 CATGTGACATGAAATAATTTTGCCTAC 58.190 33.333 20.38 0.00 0.00 3.18
7676 7815 8.530311 ACATGTGACATGAAATAATTTTGCCTA 58.470 29.630 30.26 0.00 0.00 3.93
7677 7816 7.332430 CACATGTGACATGAAATAATTTTGCCT 59.668 33.333 30.26 1.24 0.00 4.75
7678 7817 7.118101 ACACATGTGACATGAAATAATTTTGCC 59.882 33.333 31.94 0.00 0.00 4.52
7679 7818 8.020861 ACACATGTGACATGAAATAATTTTGC 57.979 30.769 31.94 0.00 0.00 3.68
7696 7835 4.944962 AATGATAACGTCCACACATGTG 57.055 40.909 24.25 24.25 45.23 3.21
7697 7836 4.155826 CCAAATGATAACGTCCACACATGT 59.844 41.667 0.00 0.00 0.00 3.21
7698 7837 4.438608 CCCAAATGATAACGTCCACACATG 60.439 45.833 0.00 0.00 0.00 3.21
7699 7838 3.694072 CCCAAATGATAACGTCCACACAT 59.306 43.478 0.00 0.00 0.00 3.21
7700 7839 3.078097 CCCAAATGATAACGTCCACACA 58.922 45.455 0.00 0.00 0.00 3.72
7701 7840 2.422127 CCCCAAATGATAACGTCCACAC 59.578 50.000 0.00 0.00 0.00 3.82
7702 7841 2.306219 TCCCCAAATGATAACGTCCACA 59.694 45.455 0.00 0.00 0.00 4.17
7703 7842 2.993937 TCCCCAAATGATAACGTCCAC 58.006 47.619 0.00 0.00 0.00 4.02
7704 7843 3.722908 TTCCCCAAATGATAACGTCCA 57.277 42.857 0.00 0.00 0.00 4.02
7705 7844 5.394224 TTTTTCCCCAAATGATAACGTCC 57.606 39.130 0.00 0.00 0.00 4.79
7724 7863 2.799207 CGACAGTGCTGCAACCATTTTT 60.799 45.455 2.77 0.00 0.00 1.94
7725 7864 1.269206 CGACAGTGCTGCAACCATTTT 60.269 47.619 2.77 0.00 0.00 1.82
7726 7865 0.311790 CGACAGTGCTGCAACCATTT 59.688 50.000 2.77 0.00 0.00 2.32
7727 7866 1.951510 CGACAGTGCTGCAACCATT 59.048 52.632 2.77 0.00 0.00 3.16
7728 7867 2.620112 GCGACAGTGCTGCAACCAT 61.620 57.895 2.77 0.00 0.00 3.55
7729 7868 3.279116 GCGACAGTGCTGCAACCA 61.279 61.111 2.77 0.00 0.00 3.67
7730 7869 2.974698 AGCGACAGTGCTGCAACC 60.975 61.111 2.77 0.00 45.28 3.77
7737 7876 3.678072 TGTACTAAAATCAGCGACAGTGC 59.322 43.478 0.00 0.00 0.00 4.40
7738 7877 5.839262 TTGTACTAAAATCAGCGACAGTG 57.161 39.130 0.00 0.00 0.00 3.66
7739 7878 5.932303 ACATTGTACTAAAATCAGCGACAGT 59.068 36.000 0.00 0.00 0.00 3.55
7740 7879 6.408858 ACATTGTACTAAAATCAGCGACAG 57.591 37.500 0.00 0.00 0.00 3.51
7741 7880 6.203915 ACAACATTGTACTAAAATCAGCGACA 59.796 34.615 0.00 0.00 40.16 4.35
7742 7881 6.599437 ACAACATTGTACTAAAATCAGCGAC 58.401 36.000 0.00 0.00 40.16 5.19
7743 7882 6.795098 ACAACATTGTACTAAAATCAGCGA 57.205 33.333 0.00 0.00 40.16 4.93
7756 7895 6.924612 TCTGCTTAGTTTCGTACAACATTGTA 59.075 34.615 0.22 0.22 42.35 2.41
7757 7896 5.756347 TCTGCTTAGTTTCGTACAACATTGT 59.244 36.000 2.32 2.32 44.86 2.71
7758 7897 6.071463 GTCTGCTTAGTTTCGTACAACATTG 58.929 40.000 0.00 0.00 0.00 2.82
7759 7898 5.178809 GGTCTGCTTAGTTTCGTACAACATT 59.821 40.000 0.00 0.00 0.00 2.71
7760 7899 4.689345 GGTCTGCTTAGTTTCGTACAACAT 59.311 41.667 0.00 0.00 0.00 2.71
7761 7900 4.053295 GGTCTGCTTAGTTTCGTACAACA 58.947 43.478 0.00 0.00 0.00 3.33
7762 7901 4.053295 TGGTCTGCTTAGTTTCGTACAAC 58.947 43.478 0.00 0.00 0.00 3.32
7763 7902 4.202182 ACTGGTCTGCTTAGTTTCGTACAA 60.202 41.667 0.00 0.00 0.00 2.41
7764 7903 3.319972 ACTGGTCTGCTTAGTTTCGTACA 59.680 43.478 0.00 0.00 0.00 2.90
7765 7904 3.910648 ACTGGTCTGCTTAGTTTCGTAC 58.089 45.455 0.00 0.00 0.00 3.67
7766 7905 3.570975 TGACTGGTCTGCTTAGTTTCGTA 59.429 43.478 2.38 0.00 0.00 3.43
7767 7906 2.364324 TGACTGGTCTGCTTAGTTTCGT 59.636 45.455 2.38 0.00 0.00 3.85
7768 7907 2.989840 CTGACTGGTCTGCTTAGTTTCG 59.010 50.000 2.38 0.00 0.00 3.46
7769 7908 3.991121 GTCTGACTGGTCTGCTTAGTTTC 59.009 47.826 0.00 0.00 0.00 2.78
7770 7909 3.388024 TGTCTGACTGGTCTGCTTAGTTT 59.612 43.478 9.51 0.00 0.00 2.66
7771 7910 2.965831 TGTCTGACTGGTCTGCTTAGTT 59.034 45.455 9.51 0.00 0.00 2.24
7772 7911 2.598565 TGTCTGACTGGTCTGCTTAGT 58.401 47.619 9.51 0.00 0.00 2.24
7773 7912 3.583806 CTTGTCTGACTGGTCTGCTTAG 58.416 50.000 9.51 0.00 0.00 2.18
7780 7919 0.032130 TCGTGCTTGTCTGACTGGTC 59.968 55.000 9.51 0.00 0.00 4.02
7812 7951 3.308117 CCTGGGCTAGTTTGACATGGTAA 60.308 47.826 0.00 0.00 0.00 2.85
7816 7955 2.290260 TGACCTGGGCTAGTTTGACATG 60.290 50.000 0.00 0.00 0.00 3.21
7820 7959 1.771854 TGTTGACCTGGGCTAGTTTGA 59.228 47.619 0.00 0.00 0.00 2.69
7821 7960 2.270352 TGTTGACCTGGGCTAGTTTG 57.730 50.000 0.00 0.00 0.00 2.93
7822 7961 2.174854 ACTTGTTGACCTGGGCTAGTTT 59.825 45.455 0.00 0.00 0.00 2.66
7823 7962 1.774856 ACTTGTTGACCTGGGCTAGTT 59.225 47.619 0.00 0.00 0.00 2.24
7824 7963 1.435256 ACTTGTTGACCTGGGCTAGT 58.565 50.000 0.00 0.00 0.00 2.57
7825 7964 2.567615 AGTACTTGTTGACCTGGGCTAG 59.432 50.000 0.00 0.00 0.00 3.42
7826 7965 2.565834 GAGTACTTGTTGACCTGGGCTA 59.434 50.000 0.00 0.00 0.00 3.93
7827 7966 1.348036 GAGTACTTGTTGACCTGGGCT 59.652 52.381 0.00 0.00 0.00 5.19
7828 7967 1.610886 GGAGTACTTGTTGACCTGGGC 60.611 57.143 0.00 0.00 0.00 5.36
7829 7968 1.003233 GGGAGTACTTGTTGACCTGGG 59.997 57.143 0.00 0.00 0.00 4.45
7830 7969 1.978580 AGGGAGTACTTGTTGACCTGG 59.021 52.381 0.00 0.00 0.00 4.45
7831 7970 4.884668 TTAGGGAGTACTTGTTGACCTG 57.115 45.455 0.00 0.00 0.00 4.00
7832 7971 4.906060 AGTTTAGGGAGTACTTGTTGACCT 59.094 41.667 0.00 1.50 0.00 3.85
7833 7972 5.224821 AGTTTAGGGAGTACTTGTTGACC 57.775 43.478 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.