Multiple sequence alignment - TraesCS1A01G229400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G229400 chr1A 100.000 6857 0 0 785 7641 401776278 401769422 0.000000e+00 12663.0
1 TraesCS1A01G229400 chr1A 100.000 470 0 0 1 470 401777062 401776593 0.000000e+00 869.0
2 TraesCS1A01G229400 chr1A 86.538 52 6 1 7267 7317 27362011 27361960 1.000000e-03 56.5
3 TraesCS1A01G229400 chr1B 97.416 2206 54 3 3524 5727 434086394 434088598 0.000000e+00 3755.0
4 TraesCS1A01G229400 chr1B 94.008 2203 83 11 785 2951 434083809 434085998 0.000000e+00 3291.0
5 TraesCS1A01G229400 chr1B 92.292 960 43 6 5729 6684 434088755 434089687 0.000000e+00 1334.0
6 TraesCS1A01G229400 chr1B 95.262 401 17 2 3002 3401 434085997 434086396 1.080000e-177 634.0
7 TraesCS1A01G229400 chr1B 87.366 467 42 8 3 467 434083222 434083673 3.160000e-143 520.0
8 TraesCS1A01G229400 chr1B 92.537 201 14 1 6994 7194 434090084 434090283 3.490000e-73 287.0
9 TraesCS1A01G229400 chr1B 83.544 158 14 6 7450 7607 434090427 434090572 3.720000e-28 137.0
10 TraesCS1A01G229400 chr1B 89.333 75 8 0 5839 5913 319127189 319127263 2.270000e-15 95.3
11 TraesCS1A01G229400 chr1B 100.000 28 0 0 6794 6821 434089912 434089939 1.400000e-02 52.8
12 TraesCS1A01G229400 chr1D 96.680 2229 49 5 3524 5729 321260385 321262611 0.000000e+00 3683.0
13 TraesCS1A01G229400 chr1D 94.106 1985 79 19 1006 2982 321257852 321259806 0.000000e+00 2983.0
14 TraesCS1A01G229400 chr1D 94.525 968 31 8 5729 6692 321262765 321263714 0.000000e+00 1474.0
15 TraesCS1A01G229400 chr1D 92.517 588 31 4 2825 3402 321259804 321260388 0.000000e+00 830.0
16 TraesCS1A01G229400 chr1D 87.174 460 30 10 3 437 321256848 321257303 5.330000e-136 496.0
17 TraesCS1A01G229400 chr1D 94.413 179 7 1 7028 7206 321263976 321264151 9.770000e-69 272.0
18 TraesCS1A01G229400 chr2A 99.213 127 1 0 3400 3526 74829186 74829060 5.960000e-56 230.0
19 TraesCS1A01G229400 chr2A 94.928 138 6 1 3397 3533 559079942 559080079 1.670000e-51 215.0
20 TraesCS1A01G229400 chr2A 89.831 59 5 1 7226 7283 22068423 22068365 2.960000e-09 75.0
21 TraesCS1A01G229400 chr2A 100.000 28 0 0 1968 1995 16852325 16852298 1.400000e-02 52.8
22 TraesCS1A01G229400 chr5B 95.139 144 5 1 3398 3541 640272869 640272728 7.710000e-55 226.0
23 TraesCS1A01G229400 chr5B 89.333 75 8 0 5839 5913 347653275 347653349 2.270000e-15 95.3
24 TraesCS1A01G229400 chr5A 94.040 151 6 3 3396 3545 290115540 290115392 7.710000e-55 226.0
25 TraesCS1A01G229400 chr3A 94.444 144 6 2 3398 3539 639088823 639088680 3.590000e-53 220.0
26 TraesCS1A01G229400 chr3A 88.235 85 6 3 5840 5923 464907640 464907721 1.750000e-16 99.0
27 TraesCS1A01G229400 chr3A 100.000 28 0 0 1967 1994 23305623 23305650 1.400000e-02 52.8
28 TraesCS1A01G229400 chr2D 96.269 134 4 1 3400 3533 62390548 62390416 1.290000e-52 219.0
29 TraesCS1A01G229400 chr2D 83.784 74 11 1 7267 7339 579535271 579535344 1.380000e-07 69.4
30 TraesCS1A01G229400 chr2D 90.385 52 4 1 7216 7266 112868369 112868420 4.950000e-07 67.6
31 TraesCS1A01G229400 chr2D 88.889 54 4 1 7220 7271 76750418 76750471 1.780000e-06 65.8
32 TraesCS1A01G229400 chr6B 95.588 136 5 1 3393 3527 30348238 30348373 4.640000e-52 217.0
33 TraesCS1A01G229400 chr6B 90.361 83 5 3 5760 5839 47264055 47264137 1.050000e-18 106.0
34 TraesCS1A01G229400 chr6B 86.538 52 6 1 7267 7317 139885284 139885233 1.000000e-03 56.5
35 TraesCS1A01G229400 chr3D 94.964 139 6 1 3392 3530 210622415 210622552 4.640000e-52 217.0
36 TraesCS1A01G229400 chr3D 88.608 79 9 0 1708 1786 508170986 508171064 6.310000e-16 97.1
37 TraesCS1A01G229400 chr2B 96.241 133 4 1 3401 3533 97944880 97944749 4.640000e-52 217.0
38 TraesCS1A01G229400 chr2B 88.679 53 6 0 7218 7270 430239510 430239458 1.780000e-06 65.8
39 TraesCS1A01G229400 chr4A 89.157 83 6 3 5760 5839 266953899 266953981 4.880000e-17 100.0
40 TraesCS1A01G229400 chr4A 83.784 74 10 2 5760 5831 467527363 467527290 1.380000e-07 69.4
41 TraesCS1A01G229400 chr7A 87.952 83 6 3 5842 5923 202195013 202194934 2.270000e-15 95.3
42 TraesCS1A01G229400 chr7A 88.889 54 4 2 7226 7277 199278696 199278643 1.780000e-06 65.8
43 TraesCS1A01G229400 chr5D 89.333 75 8 0 5839 5913 284895002 284895076 2.270000e-15 95.3
44 TraesCS1A01G229400 chr5D 88.462 52 5 1 7267 7317 294637688 294637739 2.300000e-05 62.1
45 TraesCS1A01G229400 chr4B 87.952 83 7 1 5760 5839 247563512 247563430 2.270000e-15 95.3
46 TraesCS1A01G229400 chr4B 86.047 86 10 2 5839 5922 206799988 206800073 2.940000e-14 91.6
47 TraesCS1A01G229400 chr4B 84.932 73 10 1 5760 5831 167932496 167932424 1.060000e-08 73.1
48 TraesCS1A01G229400 chr4D 86.207 87 8 4 5839 5922 190482525 190482440 2.940000e-14 91.6
49 TraesCS1A01G229400 chr4D 84.932 73 10 1 5760 5831 108862950 108863022 1.060000e-08 73.1
50 TraesCS1A01G229400 chr7D 92.157 51 4 0 7269 7319 471216281 471216331 1.060000e-08 73.1
51 TraesCS1A01G229400 chr7D 86.538 52 6 1 7267 7317 165657877 165657928 1.000000e-03 56.5
52 TraesCS1A01G229400 chr3B 92.000 50 4 0 7226 7275 224471702 224471751 3.830000e-08 71.3
53 TraesCS1A01G229400 chr3B 85.938 64 5 3 7205 7266 784495034 784494973 1.780000e-06 65.8
54 TraesCS1A01G229400 chrUn 89.286 56 5 1 7220 7274 324448658 324448713 1.380000e-07 69.4
55 TraesCS1A01G229400 chr6D 93.478 46 3 0 7225 7270 463978842 463978797 1.380000e-07 69.4
56 TraesCS1A01G229400 chr7B 87.037 54 6 1 7265 7317 489867034 489866981 8.280000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G229400 chr1A 401769422 401777062 7640 True 6766.00 12663 100.000000 1 7641 2 chr1A.!!$R2 7640
1 TraesCS1A01G229400 chr1B 434083222 434090572 7350 False 1251.35 3755 92.803125 3 7607 8 chr1B.!!$F2 7604
2 TraesCS1A01G229400 chr1D 321256848 321264151 7303 False 1623.00 3683 93.235833 3 7206 6 chr1D.!!$F1 7203

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 380 0.461961 GCTATCAGGGTGACGAGCTT 59.538 55.000 0.00 0.0 36.37 3.74 F
1548 1625 1.068434 TCGTCATATTGCAGCGATGGA 59.932 47.619 1.46 0.0 0.00 3.41 F
2645 2726 0.325933 CTGAAGACCCTGATGCCACA 59.674 55.000 0.00 0.0 0.00 4.17 F
3404 3653 0.320421 TGCGCACTTCCTTGTACTCC 60.320 55.000 5.66 0.0 0.00 3.85 F
3406 3655 0.608640 CGCACTTCCTTGTACTCCCT 59.391 55.000 0.00 0.0 0.00 4.20 F
3412 3661 0.702902 TCCTTGTACTCCCTCCGTCT 59.297 55.000 0.00 0.0 0.00 4.18 F
5661 5934 1.001641 CCACCCCTTCAAGAGCCAG 60.002 63.158 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1820 1897 2.224917 TGCCGTTATTTGGGTTTCCTCT 60.225 45.455 0.00 0.00 0.00 3.69 R
3387 3636 0.608640 AGGGAGTACAAGGAAGTGCG 59.391 55.000 0.00 0.00 0.00 5.34 R
3888 4161 0.532862 AGTGGCACCTGACTCGTTTG 60.533 55.000 15.27 0.00 0.00 2.93 R
5210 5483 1.719600 ACAAGAATCTGCTCGACAGC 58.280 50.000 9.34 0.34 46.76 4.40 R
5661 5934 5.506317 CCAGAAACATTGTTGTGGAGAGTTC 60.506 44.000 19.69 5.09 43.08 3.01 R
5729 6002 5.127031 ACACACAGTTCTTTAAATTGCCACT 59.873 36.000 0.00 0.00 0.00 4.00 R
6903 7490 0.036732 TTCATCCAGCGGTTCTGCTT 59.963 50.000 3.16 0.00 44.46 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.081425 ATCGCTCATCGCCTCTGGTC 62.081 60.000 0.00 0.00 38.27 4.02
38 39 1.039785 TCGCCTCTGGTCCATCTCTG 61.040 60.000 0.00 0.00 0.00 3.35
45 46 0.837691 TGGTCCATCTCTGTGGTGCT 60.838 55.000 0.00 0.00 40.27 4.40
157 185 2.650608 GGCGCAAGAGTGTTTTAGTTG 58.349 47.619 10.83 0.00 43.02 3.16
183 211 3.715628 ACTTGAGAATGGTGTGTTTGC 57.284 42.857 0.00 0.00 0.00 3.68
215 244 2.711978 CCTACTTTAGGGGCCTTGTC 57.288 55.000 0.84 0.00 42.42 3.18
218 247 3.010250 CCTACTTTAGGGGCCTTGTCTTT 59.990 47.826 0.84 0.00 42.42 2.52
261 290 5.546621 TTTCCCCTATAATCTCCTTCGTG 57.453 43.478 0.00 0.00 0.00 4.35
351 380 0.461961 GCTATCAGGGTGACGAGCTT 59.538 55.000 0.00 0.00 36.37 3.74
353 382 1.751351 CTATCAGGGTGACGAGCTTCA 59.249 52.381 0.00 0.00 0.00 3.02
380 409 1.320344 CCCTCGAGGTCCAACGATCA 61.320 60.000 29.25 0.00 37.86 2.92
388 417 4.676986 CGAGGTCCAACGATCATTGTTAGA 60.677 45.833 0.26 0.00 0.00 2.10
394 433 4.505922 CCAACGATCATTGTTAGAGAGCTC 59.494 45.833 5.27 5.27 0.00 4.09
395 434 4.314740 ACGATCATTGTTAGAGAGCTCC 57.685 45.455 10.93 1.70 0.00 4.70
396 435 3.243234 ACGATCATTGTTAGAGAGCTCCG 60.243 47.826 10.93 4.34 0.00 4.63
397 436 3.648009 GATCATTGTTAGAGAGCTCCGG 58.352 50.000 10.93 0.00 0.00 5.14
398 437 2.457598 TCATTGTTAGAGAGCTCCGGT 58.542 47.619 10.93 0.00 0.00 5.28
399 438 2.166459 TCATTGTTAGAGAGCTCCGGTG 59.834 50.000 10.93 0.00 0.00 4.94
400 439 1.919240 TTGTTAGAGAGCTCCGGTGA 58.081 50.000 10.93 0.00 0.00 4.02
401 440 1.919240 TGTTAGAGAGCTCCGGTGAA 58.081 50.000 10.93 0.00 0.00 3.18
402 441 1.544691 TGTTAGAGAGCTCCGGTGAAC 59.455 52.381 10.93 8.65 0.00 3.18
403 442 1.819903 GTTAGAGAGCTCCGGTGAACT 59.180 52.381 10.93 5.18 0.00 3.01
414 453 1.134965 CCGGTGAACTCTGGTGATCTC 60.135 57.143 0.00 0.00 0.00 2.75
910 971 4.809513 AGGGAATACTGCCTCGGT 57.190 55.556 0.00 0.00 39.76 4.69
911 972 3.007581 AGGGAATACTGCCTCGGTT 57.992 52.632 0.00 0.00 39.76 4.44
912 973 2.170012 AGGGAATACTGCCTCGGTTA 57.830 50.000 0.00 0.00 39.76 2.85
913 974 2.474112 AGGGAATACTGCCTCGGTTAA 58.526 47.619 0.00 0.00 39.76 2.01
914 975 2.434702 AGGGAATACTGCCTCGGTTAAG 59.565 50.000 0.00 0.00 39.76 1.85
915 976 2.169978 GGGAATACTGCCTCGGTTAAGT 59.830 50.000 0.00 0.00 0.00 2.24
916 977 3.385755 GGGAATACTGCCTCGGTTAAGTA 59.614 47.826 0.00 0.00 0.00 2.24
917 978 4.366586 GGAATACTGCCTCGGTTAAGTAC 58.633 47.826 0.00 0.00 0.00 2.73
1020 1091 3.329814 ACACCGTTTTCTATTCCTTCCCT 59.670 43.478 0.00 0.00 0.00 4.20
1161 1232 2.183046 GTCAGGCAGCGAGGAGAC 59.817 66.667 0.00 0.00 0.00 3.36
1259 1330 2.081425 CTCCTGCTAGGCTGCTACCG 62.081 65.000 0.00 0.00 34.61 4.02
1486 1557 4.388499 GAGGTGCCCTCCGCGAAA 62.388 66.667 8.23 0.00 44.36 3.46
1487 1558 3.682292 GAGGTGCCCTCCGCGAAAT 62.682 63.158 8.23 0.00 44.36 2.17
1538 1615 7.416817 TGCCAATTATTTCAGTCGTCATATTG 58.583 34.615 0.00 0.00 0.00 1.90
1539 1616 6.360681 GCCAATTATTTCAGTCGTCATATTGC 59.639 38.462 0.00 0.00 0.00 3.56
1548 1625 1.068434 TCGTCATATTGCAGCGATGGA 59.932 47.619 1.46 0.00 0.00 3.41
1560 1637 4.202357 TGCAGCGATGGAGGAATAGTAAAT 60.202 41.667 1.46 0.00 0.00 1.40
1561 1638 5.011635 TGCAGCGATGGAGGAATAGTAAATA 59.988 40.000 1.46 0.00 0.00 1.40
1562 1639 6.109359 GCAGCGATGGAGGAATAGTAAATAT 58.891 40.000 1.46 0.00 0.00 1.28
1563 1640 6.036517 GCAGCGATGGAGGAATAGTAAATATG 59.963 42.308 1.46 0.00 0.00 1.78
1666 1743 6.661777 ACTCGGATAGACTACTTTCTTAGGT 58.338 40.000 0.00 0.00 0.00 3.08
1863 1940 7.533426 GGCAATGGTCATGATATATTCAGTTC 58.467 38.462 0.00 0.00 37.89 3.01
1867 1944 7.713764 TGGTCATGATATATTCAGTTCGTTG 57.286 36.000 0.00 0.00 37.89 4.10
1877 1954 7.849804 ATATTCAGTTCGTTGCTCTAACAAT 57.150 32.000 0.00 0.00 39.30 2.71
1953 2030 0.532862 ATCCGCCAAAGATACTGCCG 60.533 55.000 0.00 0.00 0.00 5.69
1976 2053 4.775253 GCCTGCTTAGAATATACTCCCTCT 59.225 45.833 0.00 0.00 0.00 3.69
2054 2131 4.101898 TGCTCTTGTGGTAAAGTAGGTGAA 59.898 41.667 0.00 0.00 0.00 3.18
2132 2209 6.437928 TCACACATTGTTTCATTACTTCAGC 58.562 36.000 0.00 0.00 0.00 4.26
2194 2271 7.941431 TTACTTTTTGAAAGTGGTACCTTCA 57.059 32.000 14.36 11.99 0.00 3.02
2196 2273 9.629878 TTACTTTTTGAAAGTGGTACCTTCATA 57.370 29.630 14.36 7.37 0.00 2.15
2346 2423 9.509956 TTGGCAACTATTTACAGTACACTTATT 57.490 29.630 0.00 0.00 37.61 1.40
2382 2460 8.231692 TGAACATTTTCAGGTATCTCACAAAA 57.768 30.769 0.00 0.00 36.79 2.44
2509 2590 8.624776 CCCTTATGTTCTCTTAATTTAAGCAGG 58.375 37.037 10.71 4.86 35.76 4.85
2552 2633 6.377146 TCAACCTTAAAATGGAGGATGCTAAC 59.623 38.462 0.00 0.00 36.20 2.34
2636 2717 2.452600 TGGCAAAAACTGAAGACCCT 57.547 45.000 0.00 0.00 0.00 4.34
2645 2726 0.325933 CTGAAGACCCTGATGCCACA 59.674 55.000 0.00 0.00 0.00 4.17
2744 2825 1.204941 GTAGACTCACCATTCTGCCGT 59.795 52.381 0.00 0.00 0.00 5.68
2851 2932 4.767478 GTAACTGATTACCTCCCAACCTC 58.233 47.826 0.00 0.00 35.56 3.85
2857 2938 4.286549 TGATTACCTCCCAACCTCGTTTTA 59.713 41.667 0.00 0.00 0.00 1.52
2991 3229 4.038522 TGCGGAATCAATTTTTCCACTCAA 59.961 37.500 14.39 0.00 42.34 3.02
3002 3240 4.568152 TTTCCACTCAAGCTAAAAGCAC 57.432 40.909 1.22 0.00 45.56 4.40
3050 3289 7.534578 CCTGTAATCGTTCTTATCTGACGATAC 59.465 40.741 10.49 9.58 41.79 2.24
3115 3354 6.839124 TGGCTAATGTGAGACATGAATTTT 57.161 33.333 0.00 0.00 37.97 1.82
3116 3355 6.623486 TGGCTAATGTGAGACATGAATTTTG 58.377 36.000 0.00 0.00 37.97 2.44
3117 3356 6.209192 TGGCTAATGTGAGACATGAATTTTGT 59.791 34.615 0.00 0.00 37.97 2.83
3265 3514 7.320443 ACAGTAATATGCTACACATGTTTGG 57.680 36.000 0.00 0.00 40.26 3.28
3306 3555 9.041354 AGTTTAGGTCTTCTATCAGTTCAGAAT 57.959 33.333 0.00 0.00 30.70 2.40
3382 3631 8.296713 GGATTAGTAATTTGCAGTTGAAGTTCA 58.703 33.333 0.08 0.08 0.00 3.18
3387 3636 2.780065 TGCAGTTGAAGTTCACATGC 57.220 45.000 24.72 24.72 38.11 4.06
3391 3640 1.002468 AGTTGAAGTTCACATGCGCAC 60.002 47.619 14.90 0.00 0.00 5.34
3398 3647 0.592637 TTCACATGCGCACTTCCTTG 59.407 50.000 14.90 8.89 0.00 3.61
3399 3648 0.534877 TCACATGCGCACTTCCTTGT 60.535 50.000 14.90 9.70 0.00 3.16
3400 3649 1.155889 CACATGCGCACTTCCTTGTA 58.844 50.000 14.90 0.00 0.00 2.41
3401 3650 1.135972 CACATGCGCACTTCCTTGTAC 60.136 52.381 14.90 0.00 0.00 2.90
3402 3651 1.270839 ACATGCGCACTTCCTTGTACT 60.271 47.619 14.90 0.00 0.00 2.73
3403 3652 1.394917 CATGCGCACTTCCTTGTACTC 59.605 52.381 14.90 0.00 0.00 2.59
3404 3653 0.320421 TGCGCACTTCCTTGTACTCC 60.320 55.000 5.66 0.00 0.00 3.85
3405 3654 1.019805 GCGCACTTCCTTGTACTCCC 61.020 60.000 0.30 0.00 0.00 4.30
3406 3655 0.608640 CGCACTTCCTTGTACTCCCT 59.391 55.000 0.00 0.00 0.00 4.20
3407 3656 1.404315 CGCACTTCCTTGTACTCCCTC 60.404 57.143 0.00 0.00 0.00 4.30
3408 3657 1.066071 GCACTTCCTTGTACTCCCTCC 60.066 57.143 0.00 0.00 0.00 4.30
3409 3658 1.204941 CACTTCCTTGTACTCCCTCCG 59.795 57.143 0.00 0.00 0.00 4.63
3410 3659 1.203149 ACTTCCTTGTACTCCCTCCGT 60.203 52.381 0.00 0.00 0.00 4.69
3411 3660 1.477295 CTTCCTTGTACTCCCTCCGTC 59.523 57.143 0.00 0.00 0.00 4.79
3412 3661 0.702902 TCCTTGTACTCCCTCCGTCT 59.297 55.000 0.00 0.00 0.00 4.18
3413 3662 1.104630 CCTTGTACTCCCTCCGTCTC 58.895 60.000 0.00 0.00 0.00 3.36
3414 3663 1.616187 CCTTGTACTCCCTCCGTCTCA 60.616 57.143 0.00 0.00 0.00 3.27
3415 3664 2.168496 CTTGTACTCCCTCCGTCTCAA 58.832 52.381 0.00 0.00 0.00 3.02
3416 3665 2.297698 TGTACTCCCTCCGTCTCAAA 57.702 50.000 0.00 0.00 0.00 2.69
3417 3666 2.600790 TGTACTCCCTCCGTCTCAAAA 58.399 47.619 0.00 0.00 0.00 2.44
3418 3667 3.170717 TGTACTCCCTCCGTCTCAAAAT 58.829 45.455 0.00 0.00 0.00 1.82
3419 3668 3.581332 TGTACTCCCTCCGTCTCAAAATT 59.419 43.478 0.00 0.00 0.00 1.82
3420 3669 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
3421 3670 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
3422 3671 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
3423 3672 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
3424 3673 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
3425 3674 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
3426 3675 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
3427 3676 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
3428 3677 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
3429 3678 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
3430 3679 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
3431 3680 7.214381 TCCGTCTCAAAATTCTTGTCTTAGAA 58.786 34.615 0.00 0.00 38.43 2.10
3432 3681 7.878127 TCCGTCTCAAAATTCTTGTCTTAGAAT 59.122 33.333 0.00 0.00 44.62 2.40
3445 3694 8.622157 TCTTGTCTTAGAATTGTCTAGATACGG 58.378 37.037 0.00 0.00 37.65 4.02
3446 3695 8.515695 TTGTCTTAGAATTGTCTAGATACGGA 57.484 34.615 0.00 0.00 37.65 4.69
3447 3696 8.693120 TGTCTTAGAATTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 37.65 4.18
3448 3697 8.568794 TGTCTTAGAATTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 37.65 3.51
3449 3698 8.569641 GTCTTAGAATTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 37.65 3.06
3450 3699 9.788889 TCTTAGAATTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 37.65 2.29
3451 3700 9.828852 CTTAGAATTGTCTAGATACGGATGTAC 57.171 37.037 0.00 0.00 37.65 2.90
3452 3701 7.216973 AGAATTGTCTAGATACGGATGTACC 57.783 40.000 0.00 0.00 29.44 3.34
3453 3702 7.005296 AGAATTGTCTAGATACGGATGTACCT 58.995 38.462 0.00 0.00 31.68 3.08
3454 3703 8.162085 AGAATTGTCTAGATACGGATGTACCTA 58.838 37.037 0.00 0.00 31.68 3.08
3455 3704 8.701908 AATTGTCTAGATACGGATGTACCTAA 57.298 34.615 0.00 0.00 36.31 2.69
3456 3705 8.880991 ATTGTCTAGATACGGATGTACCTAAT 57.119 34.615 0.00 0.00 36.31 1.73
3457 3706 9.970553 ATTGTCTAGATACGGATGTACCTAATA 57.029 33.333 0.00 0.00 36.31 0.98
3458 3707 8.783833 TGTCTAGATACGGATGTACCTAATAC 57.216 38.462 0.00 0.00 36.31 1.89
3459 3708 8.600668 TGTCTAGATACGGATGTACCTAATACT 58.399 37.037 0.00 0.00 34.56 2.12
3464 3713 8.738106 AGATACGGATGTACCTAATACTAAAGC 58.262 37.037 0.00 0.00 34.56 3.51
3465 3714 5.766222 ACGGATGTACCTAATACTAAAGCG 58.234 41.667 0.00 0.00 34.56 4.68
3466 3715 5.300286 ACGGATGTACCTAATACTAAAGCGT 59.700 40.000 0.00 0.00 34.56 5.07
3467 3716 5.628193 CGGATGTACCTAATACTAAAGCGTG 59.372 44.000 0.00 0.00 34.56 5.34
3468 3717 6.513884 CGGATGTACCTAATACTAAAGCGTGA 60.514 42.308 0.00 0.00 34.56 4.35
3469 3718 6.640092 GGATGTACCTAATACTAAAGCGTGAC 59.360 42.308 0.00 0.00 34.56 3.67
3470 3719 6.764308 TGTACCTAATACTAAAGCGTGACT 57.236 37.500 0.00 0.00 34.56 3.41
3471 3720 7.161773 TGTACCTAATACTAAAGCGTGACTT 57.838 36.000 0.00 0.00 35.87 3.01
3472 3721 7.031372 TGTACCTAATACTAAAGCGTGACTTG 58.969 38.462 0.00 0.00 35.08 3.16
3473 3722 6.276832 ACCTAATACTAAAGCGTGACTTGA 57.723 37.500 0.00 0.00 39.09 3.02
3474 3723 6.875076 ACCTAATACTAAAGCGTGACTTGAT 58.125 36.000 0.00 0.00 39.09 2.57
3475 3724 8.004087 ACCTAATACTAAAGCGTGACTTGATA 57.996 34.615 0.00 0.00 39.09 2.15
3476 3725 7.919621 ACCTAATACTAAAGCGTGACTTGATAC 59.080 37.037 0.00 0.00 39.09 2.24
3477 3726 7.919091 CCTAATACTAAAGCGTGACTTGATACA 59.081 37.037 0.00 0.00 39.09 2.29
3478 3727 9.464714 CTAATACTAAAGCGTGACTTGATACAT 57.535 33.333 0.00 0.00 39.09 2.29
3479 3728 7.932120 ATACTAAAGCGTGACTTGATACATC 57.068 36.000 0.00 0.00 39.09 3.06
3480 3729 5.109903 ACTAAAGCGTGACTTGATACATCC 58.890 41.667 0.00 0.00 39.09 3.51
3481 3730 2.209838 AGCGTGACTTGATACATCCG 57.790 50.000 0.00 0.00 0.00 4.18
3482 3731 1.476891 AGCGTGACTTGATACATCCGT 59.523 47.619 0.00 0.00 0.00 4.69
3483 3732 2.686405 AGCGTGACTTGATACATCCGTA 59.314 45.455 0.00 0.00 0.00 4.02
3484 3733 3.318275 AGCGTGACTTGATACATCCGTAT 59.682 43.478 0.00 0.00 41.16 3.06
3485 3734 4.049186 GCGTGACTTGATACATCCGTATT 58.951 43.478 0.00 0.00 38.48 1.89
3486 3735 4.506654 GCGTGACTTGATACATCCGTATTT 59.493 41.667 0.00 0.00 38.48 1.40
3487 3736 5.688621 GCGTGACTTGATACATCCGTATTTA 59.311 40.000 0.00 0.00 38.48 1.40
3488 3737 6.129168 GCGTGACTTGATACATCCGTATTTAG 60.129 42.308 0.00 0.00 38.48 1.85
3489 3738 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
3490 3739 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
3491 3740 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
3492 3741 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
3493 3742 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
3494 3743 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
3501 3750 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
3502 3751 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
3504 3753 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
3505 3754 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
3516 3765 9.322776 CAAATCTAAGACAAGAATTTTGAGACG 57.677 33.333 7.18 0.00 31.51 4.18
3517 3766 7.602517 ATCTAAGACAAGAATTTTGAGACGG 57.397 36.000 7.18 0.00 0.00 4.79
3518 3767 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
3519 3768 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
3520 3769 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
3521 3770 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
3522 3771 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
3542 3791 7.246171 AGGGAGTACATATATTTGGTGCTAG 57.754 40.000 0.00 0.00 0.00 3.42
3582 3831 5.708736 TTCCTATTGAAGGGCTATGTTCA 57.291 39.130 0.00 0.00 46.55 3.18
3609 3859 8.433421 TCATCGAACTCTTTTTGACTAGTTTT 57.567 30.769 0.00 0.00 32.51 2.43
3672 3922 5.818678 ATGTTAAAGTCCAGTGTCCACTA 57.181 39.130 0.00 0.00 40.20 2.74
3716 3986 1.462616 GGTCCATGCACACATAGCAA 58.537 50.000 0.00 0.00 46.27 3.91
3888 4161 2.753043 CACATGGTCCAGGCTGCC 60.753 66.667 11.65 11.65 0.00 4.85
3893 4166 3.365265 GGTCCAGGCTGCCAAACG 61.365 66.667 22.65 5.95 0.00 3.60
4015 4288 7.913789 AGTGGGACTTAACAATATCACAAGTA 58.086 34.615 0.00 0.00 29.89 2.24
4125 4398 2.041620 CCCAAACCCTTCTCCATCAAGA 59.958 50.000 0.00 0.00 0.00 3.02
4259 4532 4.102524 TGTGGTGTTATCTCAGTGGTCTTT 59.897 41.667 0.00 0.00 0.00 2.52
4511 4784 1.340248 GAGTTGGACTGTTCCTCGTCA 59.660 52.381 0.00 0.00 43.31 4.35
4568 4841 6.183360 GGAAGACTATGAAGAGGAAGAAGAGG 60.183 46.154 0.00 0.00 0.00 3.69
4962 5235 6.488715 AGGAAGAAACTCATTTCCTGCTTAT 58.511 36.000 4.32 0.00 46.70 1.73
5035 5308 4.641541 TCATAATTGCATGTCAAGGTCAGG 59.358 41.667 8.23 0.00 38.22 3.86
5210 5483 1.067060 TCGGTAATGGAGACGATGCTG 59.933 52.381 0.00 0.00 0.00 4.41
5661 5934 1.001641 CCACCCCTTCAAGAGCCAG 60.002 63.158 0.00 0.00 0.00 4.85
5709 5982 6.876257 GGTTAACTTCTCCTATGCCATAGATG 59.124 42.308 13.35 5.59 34.77 2.90
5731 6004 9.137459 AGATGCTACACTATACACTTCATAAGT 57.863 33.333 0.00 0.00 44.06 2.24
5752 6181 5.591099 AGTGGCAATTTAAAGAACTGTGTG 58.409 37.500 0.00 0.00 0.00 3.82
5899 6328 5.321934 TGGGGCTAAAGGTTTTGTAGTAA 57.678 39.130 0.00 0.00 0.00 2.24
5901 6330 7.030234 TGGGGCTAAAGGTTTTGTAGTAATA 57.970 36.000 0.00 0.00 0.00 0.98
5904 6333 8.267183 GGGGCTAAAGGTTTTGTAGTAATAGTA 58.733 37.037 0.00 0.00 0.00 1.82
5939 6371 4.003648 GTGGTGTATTTGAAGGAGGTCAG 58.996 47.826 0.00 0.00 0.00 3.51
6269 6701 2.679059 CGGTGGTTCATCATCTGCTCTT 60.679 50.000 0.00 0.00 0.00 2.85
6391 6823 5.554070 TGATTAGATGATGATGACGGCAAT 58.446 37.500 0.00 0.00 0.00 3.56
6395 6827 0.377905 TGATGATGACGGCAATTGCG 59.622 50.000 23.48 19.81 43.26 4.85
6400 6832 2.202349 GACGGCAATTGCGCACTC 60.202 61.111 23.48 11.15 43.26 3.51
6408 6840 0.326264 AATTGCGCACTCCCTCTCTT 59.674 50.000 11.12 0.00 0.00 2.85
6409 6841 0.326264 ATTGCGCACTCCCTCTCTTT 59.674 50.000 11.12 0.00 0.00 2.52
6410 6842 0.108585 TTGCGCACTCCCTCTCTTTT 59.891 50.000 11.12 0.00 0.00 2.27
6411 6843 0.108585 TGCGCACTCCCTCTCTTTTT 59.891 50.000 5.66 0.00 0.00 1.94
6449 6882 7.986320 CCTTCTATCTGACTGATGACATTTTCT 59.014 37.037 5.16 0.00 36.65 2.52
6519 6954 2.000447 GAGGTGCTTGTAAACCTAGCG 59.000 52.381 0.00 0.00 46.97 4.26
6550 6985 9.781834 CTGTTTCTGTTTCTATTGTTGTTGTTA 57.218 29.630 0.00 0.00 0.00 2.41
6631 7068 2.545106 GGCTTTCCTGCAATGTTGTTTG 59.455 45.455 0.00 0.00 34.04 2.93
6632 7069 3.197265 GCTTTCCTGCAATGTTGTTTGT 58.803 40.909 0.00 0.00 0.00 2.83
6633 7070 3.001533 GCTTTCCTGCAATGTTGTTTGTG 59.998 43.478 0.00 0.00 0.00 3.33
6634 7071 3.883830 TTCCTGCAATGTTGTTTGTGT 57.116 38.095 0.00 0.00 0.00 3.72
6648 7085 4.452825 TGTTTGTGTATTTTCAGACGGGA 58.547 39.130 0.00 0.00 0.00 5.14
6649 7086 4.513692 TGTTTGTGTATTTTCAGACGGGAG 59.486 41.667 0.00 0.00 0.00 4.30
6656 7093 2.377628 TTTCAGACGGGAGCTTGCGT 62.378 55.000 0.00 0.00 0.00 5.24
6668 7105 1.576421 CTTGCGTGCCAACTCCTTC 59.424 57.895 0.00 0.00 0.00 3.46
6672 7109 1.845809 GCGTGCCAACTCCTTCACTG 61.846 60.000 0.00 0.00 0.00 3.66
6688 7125 6.643770 TCCTTCACTGTACTGAAAAACGTATC 59.356 38.462 6.77 0.00 29.66 2.24
6692 7129 8.068893 TCACTGTACTGAAAAACGTATCTTTC 57.931 34.615 6.77 9.57 33.10 2.62
6693 7130 7.707464 TCACTGTACTGAAAAACGTATCTTTCA 59.293 33.333 15.50 15.50 38.81 2.69
6702 7139 9.849166 TGAAAAACGTATCTTTCAGAAAGTTTT 57.151 25.926 20.28 17.16 38.96 2.43
6723 7160 4.461992 TTTTCTACGGAGCTGAAAAACG 57.538 40.909 6.47 0.00 38.39 3.60
6724 7161 2.806608 TCTACGGAGCTGAAAAACGT 57.193 45.000 0.00 0.00 41.10 3.99
6725 7162 3.921119 TCTACGGAGCTGAAAAACGTA 57.079 42.857 0.00 0.00 38.79 3.57
6726 7163 4.445452 TCTACGGAGCTGAAAAACGTAT 57.555 40.909 0.00 0.00 39.01 3.06
6727 7164 4.813027 TCTACGGAGCTGAAAAACGTATT 58.187 39.130 0.00 0.00 39.01 1.89
6728 7165 5.232463 TCTACGGAGCTGAAAAACGTATTT 58.768 37.500 0.00 0.00 39.01 1.40
6755 7321 1.446907 AAGAAGAATGACCAGCAGCG 58.553 50.000 0.00 0.00 0.00 5.18
6771 7337 0.886490 AGCGGTGCTCTGAAAACAGG 60.886 55.000 0.00 0.00 30.62 4.00
6788 7354 1.136500 CAGGGCTAGTTTCCTCCGTAC 59.864 57.143 0.00 0.00 0.00 3.67
6790 7356 1.551883 GGGCTAGTTTCCTCCGTACAA 59.448 52.381 0.00 0.00 0.00 2.41
6791 7357 2.027837 GGGCTAGTTTCCTCCGTACAAA 60.028 50.000 0.00 0.00 0.00 2.83
6792 7358 2.998670 GGCTAGTTTCCTCCGTACAAAC 59.001 50.000 0.00 0.00 0.00 2.93
6821 7408 4.749099 TGGCACAGCAACAATTAATTTGAC 59.251 37.500 0.00 0.00 38.76 3.18
6822 7409 4.749099 GGCACAGCAACAATTAATTTGACA 59.251 37.500 0.00 0.00 38.76 3.58
6823 7410 5.107375 GGCACAGCAACAATTAATTTGACAG 60.107 40.000 0.00 0.00 38.76 3.51
6824 7411 5.613142 GCACAGCAACAATTAATTTGACAGC 60.613 40.000 0.00 0.00 38.76 4.40
6825 7412 4.681025 ACAGCAACAATTAATTTGACAGCG 59.319 37.500 0.00 0.00 38.76 5.18
6826 7413 3.674753 AGCAACAATTAATTTGACAGCGC 59.325 39.130 0.00 0.00 38.76 5.92
6827 7414 3.674753 GCAACAATTAATTTGACAGCGCT 59.325 39.130 2.64 2.64 38.76 5.92
6830 7417 3.057315 ACAATTAATTTGACAGCGCTGCT 60.057 39.130 36.28 23.23 37.88 4.24
6841 7428 4.360027 CGCTGCTGCACACACGAC 62.360 66.667 16.29 0.00 39.64 4.34
6843 7430 2.933666 CTGCTGCACACACGACAG 59.066 61.111 0.00 0.00 34.48 3.51
6844 7431 1.884464 CTGCTGCACACACGACAGT 60.884 57.895 0.00 0.00 33.87 3.55
6846 7433 0.874175 TGCTGCACACACGACAGTAC 60.874 55.000 0.00 0.00 33.87 2.73
6847 7434 0.874175 GCTGCACACACGACAGTACA 60.874 55.000 0.00 0.00 33.87 2.90
6848 7435 0.852777 CTGCACACACGACAGTACAC 59.147 55.000 0.00 0.00 0.00 2.90
6849 7436 0.173708 TGCACACACGACAGTACACA 59.826 50.000 0.00 0.00 0.00 3.72
6850 7437 0.852777 GCACACACGACAGTACACAG 59.147 55.000 0.00 0.00 0.00 3.66
6851 7438 0.852777 CACACACGACAGTACACAGC 59.147 55.000 0.00 0.00 0.00 4.40
6852 7439 0.249322 ACACACGACAGTACACAGCC 60.249 55.000 0.00 0.00 0.00 4.85
6853 7440 1.007734 ACACGACAGTACACAGCCG 60.008 57.895 0.00 0.00 0.00 5.52
6854 7441 1.007734 CACGACAGTACACAGCCGT 60.008 57.895 0.00 0.00 0.00 5.68
6855 7442 0.596600 CACGACAGTACACAGCCGTT 60.597 55.000 0.00 0.00 0.00 4.44
6856 7443 0.103572 ACGACAGTACACAGCCGTTT 59.896 50.000 0.00 0.00 0.00 3.60
6857 7444 1.214367 CGACAGTACACAGCCGTTTT 58.786 50.000 0.00 0.00 0.00 2.43
6858 7445 1.070843 CGACAGTACACAGCCGTTTTG 60.071 52.381 0.00 0.00 0.00 2.44
6859 7446 1.937899 GACAGTACACAGCCGTTTTGT 59.062 47.619 0.00 0.00 0.00 2.83
6863 7450 3.996073 CACAGCCGTTTTGTGCAC 58.004 55.556 10.75 10.75 39.43 4.57
6865 7452 2.109739 ACAGCCGTTTTGTGCACGA 61.110 52.632 13.13 7.71 40.20 4.35
6866 7453 1.282570 CAGCCGTTTTGTGCACGAT 59.717 52.632 13.13 0.00 40.20 3.73
6867 7454 0.725784 CAGCCGTTTTGTGCACGATC 60.726 55.000 13.13 6.08 40.20 3.69
6868 7455 1.442017 GCCGTTTTGTGCACGATCC 60.442 57.895 13.13 2.96 40.20 3.36
6869 7456 1.852067 GCCGTTTTGTGCACGATCCT 61.852 55.000 13.13 0.00 40.20 3.24
6870 7457 1.434555 CCGTTTTGTGCACGATCCTA 58.565 50.000 13.13 0.00 40.20 2.94
6871 7458 2.006888 CCGTTTTGTGCACGATCCTAT 58.993 47.619 13.13 0.00 40.20 2.57
6872 7459 2.418628 CCGTTTTGTGCACGATCCTATT 59.581 45.455 13.13 0.00 40.20 1.73
6873 7460 3.416277 CGTTTTGTGCACGATCCTATTG 58.584 45.455 13.13 0.00 40.20 1.90
6874 7461 3.124466 CGTTTTGTGCACGATCCTATTGA 59.876 43.478 13.13 0.00 40.20 2.57
6875 7462 4.201812 CGTTTTGTGCACGATCCTATTGAT 60.202 41.667 13.13 0.00 40.20 2.57
6876 7463 5.266242 GTTTTGTGCACGATCCTATTGATC 58.734 41.667 13.13 0.00 45.46 2.92
6877 7464 4.406648 TTGTGCACGATCCTATTGATCT 57.593 40.909 13.13 0.00 46.52 2.75
6878 7465 3.982475 TGTGCACGATCCTATTGATCTC 58.018 45.455 13.13 0.00 46.52 2.75
6879 7466 3.384467 TGTGCACGATCCTATTGATCTCA 59.616 43.478 13.13 0.00 46.52 3.27
6880 7467 3.738282 GTGCACGATCCTATTGATCTCAC 59.262 47.826 0.00 0.00 46.52 3.51
6881 7468 3.243873 TGCACGATCCTATTGATCTCACC 60.244 47.826 0.00 0.00 46.52 4.02
6882 7469 3.243873 GCACGATCCTATTGATCTCACCA 60.244 47.826 0.00 0.00 46.52 4.17
6883 7470 4.562347 GCACGATCCTATTGATCTCACCAT 60.562 45.833 0.00 0.00 46.52 3.55
6884 7471 4.928020 CACGATCCTATTGATCTCACCATG 59.072 45.833 0.00 0.00 46.52 3.66
6885 7472 3.931468 CGATCCTATTGATCTCACCATGC 59.069 47.826 0.00 0.00 46.52 4.06
6886 7473 4.562143 CGATCCTATTGATCTCACCATGCA 60.562 45.833 0.00 0.00 46.52 3.96
6887 7474 4.987963 TCCTATTGATCTCACCATGCAT 57.012 40.909 0.00 0.00 0.00 3.96
6888 7475 4.648651 TCCTATTGATCTCACCATGCATG 58.351 43.478 20.19 20.19 0.00 4.06
6889 7476 3.190744 CCTATTGATCTCACCATGCATGC 59.809 47.826 21.69 11.82 0.00 4.06
6890 7477 2.131776 TTGATCTCACCATGCATGCA 57.868 45.000 25.04 25.04 0.00 3.96
6891 7478 2.358322 TGATCTCACCATGCATGCAT 57.642 45.000 27.46 27.46 37.08 3.96
6911 7498 2.783135 TGGGACAAGATGAAGCAGAAC 58.217 47.619 0.00 0.00 31.92 3.01
6912 7499 2.087646 GGGACAAGATGAAGCAGAACC 58.912 52.381 0.00 0.00 0.00 3.62
6913 7500 1.734465 GGACAAGATGAAGCAGAACCG 59.266 52.381 0.00 0.00 0.00 4.44
6914 7501 1.129437 GACAAGATGAAGCAGAACCGC 59.871 52.381 0.00 0.00 0.00 5.68
6915 7502 1.271054 ACAAGATGAAGCAGAACCGCT 60.271 47.619 0.00 0.00 46.67 5.52
6916 7503 1.129998 CAAGATGAAGCAGAACCGCTG 59.870 52.381 0.00 0.00 42.89 5.18
6917 7504 0.392193 AGATGAAGCAGAACCGCTGG 60.392 55.000 0.00 0.00 42.89 4.85
6918 7505 0.391661 GATGAAGCAGAACCGCTGGA 60.392 55.000 1.50 0.00 42.89 3.86
6919 7506 0.254178 ATGAAGCAGAACCGCTGGAT 59.746 50.000 1.50 0.00 42.89 3.41
6920 7507 0.674581 TGAAGCAGAACCGCTGGATG 60.675 55.000 1.50 0.00 42.89 3.51
6921 7508 0.391661 GAAGCAGAACCGCTGGATGA 60.392 55.000 1.50 0.00 42.89 2.92
6922 7509 0.036732 AAGCAGAACCGCTGGATGAA 59.963 50.000 1.50 0.00 42.89 2.57
6925 7512 1.522668 CAGAACCGCTGGATGAAACA 58.477 50.000 1.50 0.00 41.07 2.83
6946 7533 7.448748 AACAGACAGGAAAATTTATAGCGTT 57.551 32.000 0.00 0.00 0.00 4.84
6969 7556 1.066918 GACATACTACGGGGGCACG 59.933 63.158 0.00 0.00 40.31 5.34
6974 7561 2.891941 TACTACGGGGGCACGTCGAT 62.892 60.000 9.71 0.79 45.08 3.59
6991 7578 4.973055 TCCGTTCCGTGGCAACCG 62.973 66.667 0.00 0.00 0.00 4.44
7014 7630 6.238211 CCGCACAATTGGAAAAATGTTTGTTA 60.238 34.615 10.83 0.00 28.98 2.41
7027 7643 9.612066 AAAAATGTTTGTTAAACTGATCCATGT 57.388 25.926 6.07 0.00 41.90 3.21
7131 7747 0.655733 ACAACACTACTGCAACGTGC 59.344 50.000 8.97 0.00 45.29 5.34
7190 7806 5.263599 ACATGGAAATAATGCAGGACTTGA 58.736 37.500 0.00 0.00 34.49 3.02
7195 7811 2.010145 TAATGCAGGACTTGAGCGTC 57.990 50.000 0.00 0.00 0.00 5.19
7209 7825 3.585862 TGAGCGTCAAGAAATGTACTCC 58.414 45.455 0.00 0.00 0.00 3.85
7210 7826 3.006430 TGAGCGTCAAGAAATGTACTCCA 59.994 43.478 0.00 0.00 0.00 3.86
7211 7827 4.184629 GAGCGTCAAGAAATGTACTCCAT 58.815 43.478 0.00 0.00 34.36 3.41
7212 7828 4.184629 AGCGTCAAGAAATGTACTCCATC 58.815 43.478 0.00 0.00 31.75 3.51
7213 7829 3.309954 GCGTCAAGAAATGTACTCCATCC 59.690 47.826 0.00 0.00 31.75 3.51
7214 7830 3.551890 CGTCAAGAAATGTACTCCATCCG 59.448 47.826 0.00 0.00 31.75 4.18
7215 7831 4.676986 CGTCAAGAAATGTACTCCATCCGA 60.677 45.833 0.00 0.00 31.75 4.55
7216 7832 5.360591 GTCAAGAAATGTACTCCATCCGAT 58.639 41.667 0.00 0.00 31.75 4.18
7217 7833 5.817816 GTCAAGAAATGTACTCCATCCGATT 59.182 40.000 0.00 0.00 31.75 3.34
7218 7834 6.316390 GTCAAGAAATGTACTCCATCCGATTT 59.684 38.462 0.00 0.00 31.75 2.17
7219 7835 6.538742 TCAAGAAATGTACTCCATCCGATTTC 59.461 38.462 0.00 0.00 31.75 2.17
7220 7836 6.240549 AGAAATGTACTCCATCCGATTTCT 57.759 37.500 0.00 0.00 36.03 2.52
7221 7837 6.653989 AGAAATGTACTCCATCCGATTTCTT 58.346 36.000 0.00 0.00 37.00 2.52
7222 7838 7.792032 AGAAATGTACTCCATCCGATTTCTTA 58.208 34.615 0.00 0.00 37.00 2.10
7223 7839 8.265055 AGAAATGTACTCCATCCGATTTCTTAA 58.735 33.333 0.00 0.00 37.00 1.85
7224 7840 8.801882 AAATGTACTCCATCCGATTTCTTAAA 57.198 30.769 0.00 0.00 31.75 1.52
7225 7841 8.980481 AATGTACTCCATCCGATTTCTTAAAT 57.020 30.769 0.00 0.00 31.75 1.40
7227 7843 9.712305 ATGTACTCCATCCGATTTCTTAAATAG 57.288 33.333 0.00 0.00 0.00 1.73
7228 7844 8.701895 TGTACTCCATCCGATTTCTTAAATAGT 58.298 33.333 0.00 0.00 0.00 2.12
7257 7873 8.421249 AAGTTGGGTCATCTATTTTGAAATGA 57.579 30.769 0.00 0.00 0.00 2.57
7258 7874 8.421249 AGTTGGGTCATCTATTTTGAAATGAA 57.579 30.769 0.00 0.00 30.45 2.57
7259 7875 8.869109 AGTTGGGTCATCTATTTTGAAATGAAA 58.131 29.630 0.00 0.00 30.45 2.69
7260 7876 9.143631 GTTGGGTCATCTATTTTGAAATGAAAG 57.856 33.333 0.00 0.00 30.45 2.62
7261 7877 7.839907 TGGGTCATCTATTTTGAAATGAAAGG 58.160 34.615 0.00 0.00 30.45 3.11
7262 7878 7.673504 TGGGTCATCTATTTTGAAATGAAAGGA 59.326 33.333 0.00 0.00 30.45 3.36
7263 7879 8.193438 GGGTCATCTATTTTGAAATGAAAGGAG 58.807 37.037 0.00 0.00 30.45 3.69
7264 7880 8.743714 GGTCATCTATTTTGAAATGAAAGGAGT 58.256 33.333 0.00 0.00 30.45 3.85
7284 7900 8.828688 AGGAGTATAATATAAGACGTTTTGGC 57.171 34.615 0.83 0.00 0.00 4.52
7285 7901 8.426489 AGGAGTATAATATAAGACGTTTTGGCA 58.574 33.333 0.83 0.00 0.00 4.92
7286 7902 8.709646 GGAGTATAATATAAGACGTTTTGGCAG 58.290 37.037 0.83 0.00 0.00 4.85
7287 7903 9.257651 GAGTATAATATAAGACGTTTTGGCAGT 57.742 33.333 0.83 0.00 0.00 4.40
7288 7904 9.609346 AGTATAATATAAGACGTTTTGGCAGTT 57.391 29.630 0.83 0.00 0.00 3.16
7294 7910 7.867445 ATAAGACGTTTTGGCAGTTTAATTG 57.133 32.000 0.83 0.00 0.00 2.32
7295 7911 5.508200 AGACGTTTTGGCAGTTTAATTGA 57.492 34.783 0.00 0.00 0.00 2.57
7296 7912 5.897050 AGACGTTTTGGCAGTTTAATTGAA 58.103 33.333 0.00 0.00 0.00 2.69
7297 7913 5.746721 AGACGTTTTGGCAGTTTAATTGAAC 59.253 36.000 4.99 4.99 0.00 3.18
7298 7914 4.806775 ACGTTTTGGCAGTTTAATTGAACC 59.193 37.500 9.31 0.00 0.00 3.62
7299 7915 4.085312 CGTTTTGGCAGTTTAATTGAACCG 60.085 41.667 9.31 0.93 0.00 4.44
7300 7916 4.657436 TTTGGCAGTTTAATTGAACCGT 57.343 36.364 9.31 0.00 0.00 4.83
7301 7917 3.907894 TGGCAGTTTAATTGAACCGTC 57.092 42.857 9.31 1.95 0.00 4.79
7302 7918 3.215151 TGGCAGTTTAATTGAACCGTCA 58.785 40.909 9.31 4.62 0.00 4.35
7304 7920 3.978855 GGCAGTTTAATTGAACCGTCAAC 59.021 43.478 9.31 0.00 46.40 3.18
7305 7921 4.498345 GGCAGTTTAATTGAACCGTCAACA 60.498 41.667 9.31 0.00 46.40 3.33
7306 7922 5.219633 GCAGTTTAATTGAACCGTCAACAT 58.780 37.500 9.31 0.00 46.40 2.71
7307 7923 5.116983 GCAGTTTAATTGAACCGTCAACATG 59.883 40.000 9.31 0.00 46.40 3.21
7308 7924 6.205784 CAGTTTAATTGAACCGTCAACATGT 58.794 36.000 9.31 0.00 46.40 3.21
7309 7925 6.359617 CAGTTTAATTGAACCGTCAACATGTC 59.640 38.462 9.31 0.00 46.40 3.06
7310 7926 6.038825 AGTTTAATTGAACCGTCAACATGTCA 59.961 34.615 9.31 0.00 46.40 3.58
7311 7927 6.567687 TTAATTGAACCGTCAACATGTCAT 57.432 33.333 0.00 0.00 46.40 3.06
7312 7928 7.674471 TTAATTGAACCGTCAACATGTCATA 57.326 32.000 0.00 0.00 46.40 2.15
7313 7929 6.757897 AATTGAACCGTCAACATGTCATAT 57.242 33.333 0.00 0.00 46.40 1.78
7314 7930 7.857734 AATTGAACCGTCAACATGTCATATA 57.142 32.000 0.00 0.00 46.40 0.86
7315 7931 8.450578 AATTGAACCGTCAACATGTCATATAT 57.549 30.769 0.00 0.00 46.40 0.86
7316 7932 7.857734 TTGAACCGTCAACATGTCATATATT 57.142 32.000 0.00 0.00 38.88 1.28
7317 7933 7.857734 TGAACCGTCAACATGTCATATATTT 57.142 32.000 0.00 0.00 0.00 1.40
7318 7934 8.950208 TGAACCGTCAACATGTCATATATTTA 57.050 30.769 0.00 0.00 0.00 1.40
7319 7935 9.384764 TGAACCGTCAACATGTCATATATTTAA 57.615 29.630 0.00 0.00 0.00 1.52
7370 7989 4.069304 AGCTCAGCTTAGACTATCTACGG 58.931 47.826 0.00 0.00 33.89 4.02
7378 7997 1.457079 ACTATCTACGGCCGGGCTT 60.457 57.895 31.76 20.15 0.00 4.35
7392 8011 1.303282 GGCTTGGGAAATCCGGTCT 59.697 57.895 0.00 0.00 38.76 3.85
7402 8021 4.378770 GGGAAATCCGGTCTTTTAAACGTC 60.379 45.833 0.00 0.00 36.71 4.34
7405 8024 1.068434 TCCGGTCTTTTAAACGTCCGT 59.932 47.619 22.06 0.00 36.84 4.69
7406 8025 1.192980 CCGGTCTTTTAAACGTCCGTG 59.807 52.381 22.06 13.46 36.84 4.94
7407 8026 1.192980 CGGTCTTTTAAACGTCCGTGG 59.807 52.381 17.89 0.00 34.38 4.94
7409 8028 3.069289 GGTCTTTTAAACGTCCGTGGAT 58.931 45.455 0.00 0.00 0.00 3.41
7410 8029 3.124128 GGTCTTTTAAACGTCCGTGGATC 59.876 47.826 0.00 0.00 0.00 3.36
7411 8030 3.124128 GTCTTTTAAACGTCCGTGGATCC 59.876 47.826 4.20 4.20 0.00 3.36
7415 8034 2.496828 AAACGTCCGTGGATCCGTCC 62.497 60.000 7.39 0.00 45.31 4.79
7430 8049 0.461870 CGTCCGATCATGAGCCCAAA 60.462 55.000 5.18 0.00 0.00 3.28
7434 8053 0.379669 CGATCATGAGCCCAAACAGC 59.620 55.000 5.18 0.00 0.00 4.40
7436 8055 0.322816 ATCATGAGCCCAAACAGCGT 60.323 50.000 0.09 0.00 34.64 5.07
7439 8058 0.537143 ATGAGCCCAAACAGCGTTGA 60.537 50.000 6.16 0.00 34.64 3.18
7440 8059 0.749818 TGAGCCCAAACAGCGTTGAA 60.750 50.000 6.16 0.00 34.64 2.69
7468 8098 4.943705 TCCTATTGCACAACTTCATTCCTC 59.056 41.667 0.00 0.00 0.00 3.71
7469 8099 4.701651 CCTATTGCACAACTTCATTCCTCA 59.298 41.667 0.00 0.00 0.00 3.86
7473 8103 9.276590 CTATTGCACAACTTCATTCCTCATATA 57.723 33.333 0.00 0.00 0.00 0.86
7475 8105 7.558161 TGCACAACTTCATTCCTCATATAAG 57.442 36.000 0.00 0.00 0.00 1.73
7495 8125 4.114058 AGAATTTCAAATCCATGCACGG 57.886 40.909 0.00 0.00 0.00 4.94
7496 8126 3.511146 AGAATTTCAAATCCATGCACGGT 59.489 39.130 0.00 0.00 0.00 4.83
7497 8127 3.508744 ATTTCAAATCCATGCACGGTC 57.491 42.857 0.00 0.00 0.00 4.79
7498 8128 0.801872 TTCAAATCCATGCACGGTCG 59.198 50.000 0.00 0.00 0.00 4.79
7500 8130 0.521291 CAAATCCATGCACGGTCGTT 59.479 50.000 0.00 0.00 0.00 3.85
7501 8131 1.068610 CAAATCCATGCACGGTCGTTT 60.069 47.619 0.00 0.00 0.00 3.60
7516 8146 8.744011 GCACGGTCGTTTATATAGATGAATATC 58.256 37.037 0.00 0.00 0.00 1.63
7613 8243 7.671495 AATTCAAACATTAAACTCATTGGCC 57.329 32.000 0.00 0.00 0.00 5.36
7614 8244 4.804108 TCAAACATTAAACTCATTGGCCG 58.196 39.130 0.00 0.00 0.00 6.13
7615 8245 2.939460 ACATTAAACTCATTGGCCGC 57.061 45.000 0.00 0.00 0.00 6.53
7616 8246 2.446435 ACATTAAACTCATTGGCCGCT 58.554 42.857 0.00 0.00 0.00 5.52
7617 8247 3.616219 ACATTAAACTCATTGGCCGCTA 58.384 40.909 0.00 0.00 0.00 4.26
7618 8248 4.207165 ACATTAAACTCATTGGCCGCTAT 58.793 39.130 0.00 0.00 0.00 2.97
7619 8249 4.036734 ACATTAAACTCATTGGCCGCTATG 59.963 41.667 0.00 1.78 0.00 2.23
7620 8250 1.392589 AAACTCATTGGCCGCTATGG 58.607 50.000 11.14 6.08 42.50 2.74
7621 8251 0.466189 AACTCATTGGCCGCTATGGG 60.466 55.000 9.87 9.87 38.63 4.00
7622 8252 1.149174 CTCATTGGCCGCTATGGGT 59.851 57.895 11.14 0.00 38.63 4.51
7623 8253 0.466189 CTCATTGGCCGCTATGGGTT 60.466 55.000 11.14 0.00 38.63 4.11
7624 8254 0.465460 TCATTGGCCGCTATGGGTTC 60.465 55.000 11.14 0.00 38.63 3.62
7625 8255 0.751277 CATTGGCCGCTATGGGTTCA 60.751 55.000 0.00 0.00 38.63 3.18
7626 8256 0.751643 ATTGGCCGCTATGGGTTCAC 60.752 55.000 0.00 0.00 38.63 3.18
7627 8257 2.130821 TTGGCCGCTATGGGTTCACA 62.131 55.000 0.00 0.00 38.63 3.58
7628 8258 1.152963 GGCCGCTATGGGTTCACAT 60.153 57.895 0.00 0.00 38.63 3.21
7629 8259 0.107831 GGCCGCTATGGGTTCACATA 59.892 55.000 0.00 0.00 38.63 2.29
7630 8260 1.271379 GGCCGCTATGGGTTCACATAT 60.271 52.381 0.00 0.00 38.63 1.78
7631 8261 1.806542 GCCGCTATGGGTTCACATATG 59.193 52.381 0.00 0.00 38.63 1.78
7632 8262 1.806542 CCGCTATGGGTTCACATATGC 59.193 52.381 1.58 2.06 33.22 3.14
7633 8263 2.550855 CCGCTATGGGTTCACATATGCT 60.551 50.000 1.58 0.00 33.22 3.79
7634 8264 2.738846 CGCTATGGGTTCACATATGCTC 59.261 50.000 1.58 0.00 33.22 4.26
7635 8265 3.077359 GCTATGGGTTCACATATGCTCC 58.923 50.000 1.58 0.35 33.22 4.70
7636 8266 3.496692 GCTATGGGTTCACATATGCTCCA 60.497 47.826 1.58 4.28 33.22 3.86
7637 8267 2.418368 TGGGTTCACATATGCTCCAC 57.582 50.000 1.58 0.00 0.00 4.02
7638 8268 1.299541 GGGTTCACATATGCTCCACG 58.700 55.000 1.58 0.00 0.00 4.94
7639 8269 1.134521 GGGTTCACATATGCTCCACGA 60.135 52.381 1.58 0.00 0.00 4.35
7640 8270 2.205074 GGTTCACATATGCTCCACGAG 58.795 52.381 1.58 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.277273 TCTTCAGCACCACAGAGATGG 59.723 52.381 0.00 0.00 46.10 3.51
45 46 7.506114 TCTACTTTGGTTTTAGAGCTTCTTCA 58.494 34.615 0.00 0.00 0.00 3.02
85 88 9.762933 TGGATTTCTTATGTTTTCAGGAAAAAG 57.237 29.630 8.64 3.75 41.37 2.27
139 142 2.031157 CCCCAACTAAAACACTCTTGCG 60.031 50.000 0.00 0.00 0.00 4.85
142 145 4.079385 AGTTCCCCCAACTAAAACACTCTT 60.079 41.667 0.00 0.00 44.13 2.85
157 185 1.075536 ACACCATTCTCAAGTTCCCCC 59.924 52.381 0.00 0.00 0.00 5.40
230 259 7.799583 AGGAGATTATAGGGGAAATAGTTGGAA 59.200 37.037 0.00 0.00 0.00 3.53
261 290 9.914923 AATGCGAAAAAGAGAAAAACATAAAAC 57.085 25.926 0.00 0.00 0.00 2.43
295 324 2.101582 CCTAGAATTCGCCTGTGCTAGT 59.898 50.000 0.00 0.00 34.43 2.57
310 339 3.476552 CAAACCTTGTCACAGCCTAGAA 58.523 45.455 0.00 0.00 0.00 2.10
319 348 2.749621 CCTGATAGCCAAACCTTGTCAC 59.250 50.000 0.00 0.00 0.00 3.67
351 380 1.379176 CCTCGAGGGAGCTCACTGA 60.379 63.158 26.67 19.18 39.06 3.41
353 382 1.379309 GACCTCGAGGGAGCTCACT 60.379 63.158 34.04 21.13 39.06 3.41
373 402 4.688021 GGAGCTCTCTAACAATGATCGTT 58.312 43.478 14.64 0.00 0.00 3.85
380 409 2.457598 TCACCGGAGCTCTCTAACAAT 58.542 47.619 9.46 0.00 0.00 2.71
394 433 0.898320 AGATCACCAGAGTTCACCGG 59.102 55.000 0.00 0.00 0.00 5.28
395 434 1.134965 GGAGATCACCAGAGTTCACCG 60.135 57.143 4.05 0.00 0.00 4.94
396 435 1.902508 TGGAGATCACCAGAGTTCACC 59.097 52.381 7.91 0.00 34.77 4.02
414 453 0.322816 CACCCATGGAAGGTCACTGG 60.323 60.000 15.22 0.00 34.56 4.00
441 480 4.828925 GGAGCTCGCTCACAGGCC 62.829 72.222 19.44 0.00 44.40 5.19
443 482 4.504916 CCGGAGCTCGCTCACAGG 62.505 72.222 19.44 14.80 44.40 4.00
896 957 5.259832 AGTACTTAACCGAGGCAGTATTC 57.740 43.478 0.00 0.00 0.00 1.75
899 960 4.848357 AGTAGTACTTAACCGAGGCAGTA 58.152 43.478 0.00 0.00 0.00 2.74
900 961 3.694926 AGTAGTACTTAACCGAGGCAGT 58.305 45.455 0.00 0.00 0.00 4.40
908 969 4.781934 TCCTCCCGTAGTAGTACTTAACC 58.218 47.826 8.40 0.00 0.00 2.85
910 971 7.749666 ACATATCCTCCCGTAGTAGTACTTAA 58.250 38.462 8.40 0.00 0.00 1.85
911 972 7.321717 ACATATCCTCCCGTAGTAGTACTTA 57.678 40.000 8.40 0.00 0.00 2.24
912 973 6.198237 ACATATCCTCCCGTAGTAGTACTT 57.802 41.667 8.40 0.00 0.00 2.24
913 974 5.280419 GGACATATCCTCCCGTAGTAGTACT 60.280 48.000 8.14 8.14 42.45 2.73
914 975 4.940654 GGACATATCCTCCCGTAGTAGTAC 59.059 50.000 0.00 0.00 42.45 2.73
915 976 4.598807 TGGACATATCCTCCCGTAGTAGTA 59.401 45.833 0.00 0.00 46.43 1.82
916 977 3.396946 TGGACATATCCTCCCGTAGTAGT 59.603 47.826 0.00 0.00 46.43 2.73
917 978 4.030314 TGGACATATCCTCCCGTAGTAG 57.970 50.000 0.00 0.00 46.43 2.57
976 1037 1.422402 GGGTACAACCAAAGTGAGGGA 59.578 52.381 0.00 0.00 41.02 4.20
1020 1091 1.871039 CTCGCGGGAGAAAACAAAAGA 59.129 47.619 24.08 0.00 43.27 2.52
1214 1285 3.443045 GCATCTGCAACCCGGTGG 61.443 66.667 0.00 0.00 41.59 4.61
1381 1452 3.056749 AGAAAGATAGACGTCAAAGGCGT 60.057 43.478 19.50 0.00 45.86 5.68
1486 1557 7.273320 TGAAGTATAGCTTACTACTTGCGAT 57.727 36.000 16.31 0.00 38.09 4.58
1487 1558 6.688637 TGAAGTATAGCTTACTACTTGCGA 57.311 37.500 16.31 3.31 38.09 5.10
1538 1615 3.386768 TTACTATTCCTCCATCGCTGC 57.613 47.619 0.00 0.00 0.00 5.25
1539 1616 7.099764 ACATATTTACTATTCCTCCATCGCTG 58.900 38.462 0.00 0.00 0.00 5.18
1560 1637 5.740803 GCCTCGTGGGAATGTGTAATACATA 60.741 44.000 5.54 0.00 42.16 2.29
1561 1638 4.982277 GCCTCGTGGGAATGTGTAATACAT 60.982 45.833 5.54 0.00 42.88 2.29
1562 1639 3.680475 GCCTCGTGGGAATGTGTAATACA 60.680 47.826 5.54 0.00 39.77 2.29
1563 1640 2.870411 GCCTCGTGGGAATGTGTAATAC 59.130 50.000 5.54 0.00 37.23 1.89
1626 1703 9.926158 TCTATCCGAGTATAACAGTAGAACTAG 57.074 37.037 0.00 0.00 0.00 2.57
1663 1740 2.371179 CAGAGTATGGGATGATGCACCT 59.629 50.000 0.00 0.00 0.00 4.00
1664 1741 2.551721 CCAGAGTATGGGATGATGCACC 60.552 54.545 0.00 0.00 46.36 5.01
1820 1897 2.224917 TGCCGTTATTTGGGTTTCCTCT 60.225 45.455 0.00 0.00 0.00 3.69
1863 1940 2.548057 ACACCACATTGTTAGAGCAACG 59.452 45.455 0.00 0.00 40.26 4.10
1867 1944 9.503427 GAAAATTATACACCACATTGTTAGAGC 57.497 33.333 0.00 0.00 0.00 4.09
1877 1954 6.373216 GGTGCTACAGAAAATTATACACCACA 59.627 38.462 0.00 0.00 43.52 4.17
1953 2030 4.775253 AGAGGGAGTATATTCTAAGCAGGC 59.225 45.833 0.00 0.00 0.00 4.85
2054 2131 7.716998 ACGATCAAGGATGCAAAGAGTAATATT 59.283 33.333 0.00 0.00 0.00 1.28
2372 2449 8.543293 AATCATCCATGGTAATTTTGTGAGAT 57.457 30.769 12.58 0.00 0.00 2.75
2382 2460 9.425248 ACATAAACTGAAATCATCCATGGTAAT 57.575 29.630 12.58 0.94 0.00 1.89
2509 2590 3.543680 TGACTTTAGCCTCTGTATGCC 57.456 47.619 0.00 0.00 0.00 4.40
2552 2633 5.005779 GTCAACATTCCAATCTACTACTGCG 59.994 44.000 0.00 0.00 0.00 5.18
2636 2717 2.158769 ACTTGAACACTCTGTGGCATCA 60.159 45.455 0.00 1.81 37.94 3.07
2744 2825 5.005740 GCAGCATCACCATTATGAGGATAA 58.994 41.667 0.00 0.00 32.04 1.75
2946 3184 7.712797 CGCAAGGAAAATGTTATAAGGGTAAT 58.287 34.615 0.00 0.00 0.00 1.89
2984 3222 3.141398 TCAGTGCTTTTAGCTTGAGTGG 58.859 45.455 0.00 0.00 42.97 4.00
2991 3229 9.535878 GAGTATAATAACTCAGTGCTTTTAGCT 57.464 33.333 0.00 0.00 44.41 3.32
3024 3262 5.817988 TCGTCAGATAAGAACGATTACAGG 58.182 41.667 0.00 0.00 0.00 4.00
3034 3272 7.342284 AGAGGGAAAAGTATCGTCAGATAAGAA 59.658 37.037 0.00 0.00 40.68 2.52
3115 3354 4.849518 TGCTTGGCATATTAAGTACCACA 58.150 39.130 0.00 0.00 31.71 4.17
3116 3355 5.828299 TTGCTTGGCATATTAAGTACCAC 57.172 39.130 0.00 0.00 38.76 4.16
3117 3356 6.379703 ACAATTGCTTGGCATATTAAGTACCA 59.620 34.615 5.05 0.00 38.76 3.25
3265 3514 4.705991 ACCTAAACTAGTCTCTGCCTACAC 59.294 45.833 0.00 0.00 0.00 2.90
3306 3555 1.922447 AGGGTATGCACTTCCAATCCA 59.078 47.619 0.00 0.00 0.00 3.41
3382 3631 1.156736 GTACAAGGAAGTGCGCATGT 58.843 50.000 15.91 15.69 0.00 3.21
3387 3636 0.608640 AGGGAGTACAAGGAAGTGCG 59.391 55.000 0.00 0.00 0.00 5.34
3391 3640 1.477295 GACGGAGGGAGTACAAGGAAG 59.523 57.143 0.00 0.00 0.00 3.46
3398 3647 3.889520 ATTTTGAGACGGAGGGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
3399 3648 4.094476 AGAATTTTGAGACGGAGGGAGTA 58.906 43.478 0.00 0.00 0.00 2.59
3400 3649 2.907042 AGAATTTTGAGACGGAGGGAGT 59.093 45.455 0.00 0.00 0.00 3.85
3401 3650 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
3402 3651 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
3403 3652 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
3404 3653 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
3405 3654 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
3406 3655 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
3407 3656 7.421530 TTCTAAGACAAGAATTTTGAGACGG 57.578 36.000 7.18 0.00 30.54 4.79
3419 3668 8.622157 CCGTATCTAGACAATTCTAAGACAAGA 58.378 37.037 0.00 0.00 33.73 3.02
3420 3669 8.622157 TCCGTATCTAGACAATTCTAAGACAAG 58.378 37.037 0.00 0.00 33.73 3.16
3421 3670 8.515695 TCCGTATCTAGACAATTCTAAGACAA 57.484 34.615 0.00 0.00 33.73 3.18
3422 3671 8.568794 CATCCGTATCTAGACAATTCTAAGACA 58.431 37.037 0.00 0.00 33.73 3.41
3423 3672 8.569641 ACATCCGTATCTAGACAATTCTAAGAC 58.430 37.037 0.00 0.00 33.73 3.01
3424 3673 8.693120 ACATCCGTATCTAGACAATTCTAAGA 57.307 34.615 0.00 0.00 33.73 2.10
3425 3674 9.828852 GTACATCCGTATCTAGACAATTCTAAG 57.171 37.037 0.00 0.00 33.73 2.18
3426 3675 8.790718 GGTACATCCGTATCTAGACAATTCTAA 58.209 37.037 0.00 0.00 33.73 2.10
3427 3676 8.162085 AGGTACATCCGTATCTAGACAATTCTA 58.838 37.037 0.00 0.00 37.29 2.10
3428 3677 7.005296 AGGTACATCCGTATCTAGACAATTCT 58.995 38.462 0.00 0.00 37.29 2.40
3429 3678 7.216973 AGGTACATCCGTATCTAGACAATTC 57.783 40.000 0.00 0.00 37.29 2.17
3430 3679 8.701908 TTAGGTACATCCGTATCTAGACAATT 57.298 34.615 0.00 0.00 41.33 2.32
3431 3680 8.880991 ATTAGGTACATCCGTATCTAGACAAT 57.119 34.615 0.00 0.00 41.33 2.71
3432 3681 9.224267 GTATTAGGTACATCCGTATCTAGACAA 57.776 37.037 0.00 0.00 41.33 3.18
3433 3682 8.600668 AGTATTAGGTACATCCGTATCTAGACA 58.399 37.037 0.00 0.00 41.33 3.41
3438 3687 8.738106 GCTTTAGTATTAGGTACATCCGTATCT 58.262 37.037 0.00 0.00 41.99 1.98
3439 3688 7.695618 CGCTTTAGTATTAGGTACATCCGTATC 59.304 40.741 0.00 0.00 41.99 2.24
3440 3689 7.175641 ACGCTTTAGTATTAGGTACATCCGTAT 59.824 37.037 0.00 0.00 41.99 3.06
3441 3690 6.486657 ACGCTTTAGTATTAGGTACATCCGTA 59.513 38.462 0.00 0.00 41.99 4.02
3442 3691 5.300286 ACGCTTTAGTATTAGGTACATCCGT 59.700 40.000 0.00 0.00 41.99 4.69
3443 3692 5.628193 CACGCTTTAGTATTAGGTACATCCG 59.372 44.000 0.00 0.00 41.99 4.18
3444 3693 6.640092 GTCACGCTTTAGTATTAGGTACATCC 59.360 42.308 0.00 0.00 35.67 3.51
3445 3694 7.424001 AGTCACGCTTTAGTATTAGGTACATC 58.576 38.462 0.00 0.00 35.67 3.06
3446 3695 7.344095 AGTCACGCTTTAGTATTAGGTACAT 57.656 36.000 0.00 0.00 35.67 2.29
3447 3696 6.764308 AGTCACGCTTTAGTATTAGGTACA 57.236 37.500 0.00 0.00 35.67 2.90
3448 3697 7.253422 TCAAGTCACGCTTTAGTATTAGGTAC 58.747 38.462 0.00 0.00 34.69 3.34
3449 3698 7.395190 TCAAGTCACGCTTTAGTATTAGGTA 57.605 36.000 0.00 0.00 34.69 3.08
3450 3699 6.276832 TCAAGTCACGCTTTAGTATTAGGT 57.723 37.500 0.00 0.00 34.69 3.08
3451 3700 7.919091 TGTATCAAGTCACGCTTTAGTATTAGG 59.081 37.037 0.00 0.00 34.69 2.69
3452 3701 8.851960 TGTATCAAGTCACGCTTTAGTATTAG 57.148 34.615 0.00 0.00 34.69 1.73
3453 3702 9.459640 GATGTATCAAGTCACGCTTTAGTATTA 57.540 33.333 0.00 0.00 34.69 0.98
3454 3703 7.438459 GGATGTATCAAGTCACGCTTTAGTATT 59.562 37.037 0.00 0.00 34.69 1.89
3455 3704 6.924060 GGATGTATCAAGTCACGCTTTAGTAT 59.076 38.462 0.00 0.00 34.69 2.12
3456 3705 6.270815 GGATGTATCAAGTCACGCTTTAGTA 58.729 40.000 0.00 0.00 34.69 1.82
3457 3706 5.109903 GGATGTATCAAGTCACGCTTTAGT 58.890 41.667 0.00 0.00 34.69 2.24
3458 3707 4.207224 CGGATGTATCAAGTCACGCTTTAG 59.793 45.833 0.00 0.00 34.69 1.85
3459 3708 4.109766 CGGATGTATCAAGTCACGCTTTA 58.890 43.478 0.00 0.00 34.69 1.85
3460 3709 2.930040 CGGATGTATCAAGTCACGCTTT 59.070 45.455 0.00 0.00 34.69 3.51
3461 3710 2.094182 ACGGATGTATCAAGTCACGCTT 60.094 45.455 0.00 0.00 38.08 4.68
3462 3711 1.476891 ACGGATGTATCAAGTCACGCT 59.523 47.619 0.00 0.00 0.00 5.07
3463 3712 1.922570 ACGGATGTATCAAGTCACGC 58.077 50.000 0.00 0.00 0.00 5.34
3464 3713 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
3465 3714 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
3466 3715 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
3467 3716 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
3468 3717 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
3475 3724 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
3476 3725 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
3478 3727 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
3479 3728 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
3490 3739 9.322776 CGTCTCAAAATTCTTGTCTTAGATTTG 57.677 33.333 0.00 0.00 30.65 2.32
3491 3740 8.507249 CCGTCTCAAAATTCTTGTCTTAGATTT 58.493 33.333 0.00 0.00 0.00 2.17
3492 3741 7.878127 TCCGTCTCAAAATTCTTGTCTTAGATT 59.122 33.333 0.00 0.00 0.00 2.40
3493 3742 7.386851 TCCGTCTCAAAATTCTTGTCTTAGAT 58.613 34.615 0.00 0.00 0.00 1.98
3494 3743 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
3495 3744 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
3496 3745 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
3497 3746 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
3498 3747 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
3499 3748 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
3500 3749 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
3501 3750 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
3502 3751 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
3503 3752 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
3504 3753 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
3505 3754 3.581332 TGTACTCCCTCCGTCTCAAAATT 59.419 43.478 0.00 0.00 0.00 1.82
3506 3755 3.170717 TGTACTCCCTCCGTCTCAAAAT 58.829 45.455 0.00 0.00 0.00 1.82
3507 3756 2.600790 TGTACTCCCTCCGTCTCAAAA 58.399 47.619 0.00 0.00 0.00 2.44
3508 3757 2.297698 TGTACTCCCTCCGTCTCAAA 57.702 50.000 0.00 0.00 0.00 2.69
3509 3758 2.526888 ATGTACTCCCTCCGTCTCAA 57.473 50.000 0.00 0.00 0.00 3.02
3510 3759 3.878237 ATATGTACTCCCTCCGTCTCA 57.122 47.619 0.00 0.00 0.00 3.27
3511 3760 6.350277 CCAAATATATGTACTCCCTCCGTCTC 60.350 46.154 0.00 0.00 0.00 3.36
3512 3761 5.480772 CCAAATATATGTACTCCCTCCGTCT 59.519 44.000 0.00 0.00 0.00 4.18
3513 3762 5.245526 ACCAAATATATGTACTCCCTCCGTC 59.754 44.000 0.00 0.00 0.00 4.79
3514 3763 5.011738 CACCAAATATATGTACTCCCTCCGT 59.988 44.000 0.00 0.00 0.00 4.69
3515 3764 5.479306 CACCAAATATATGTACTCCCTCCG 58.521 45.833 0.00 0.00 0.00 4.63
3516 3765 5.013183 AGCACCAAATATATGTACTCCCTCC 59.987 44.000 0.00 0.00 0.00 4.30
3517 3766 6.115448 AGCACCAAATATATGTACTCCCTC 57.885 41.667 0.00 0.00 0.00 4.30
3518 3767 6.787957 ACTAGCACCAAATATATGTACTCCCT 59.212 38.462 0.00 0.00 0.00 4.20
3519 3768 7.005709 ACTAGCACCAAATATATGTACTCCC 57.994 40.000 0.00 0.00 0.00 4.30
3520 3769 8.804204 ACTACTAGCACCAAATATATGTACTCC 58.196 37.037 0.00 0.00 0.00 3.85
3521 3770 9.627395 CACTACTAGCACCAAATATATGTACTC 57.373 37.037 0.00 0.00 0.00 2.59
3522 3771 8.088981 GCACTACTAGCACCAAATATATGTACT 58.911 37.037 0.00 0.00 0.00 2.73
3542 3791 3.944015 AGGAAATCAAGCTCATGCACTAC 59.056 43.478 0.00 0.00 42.74 2.73
3582 3831 8.608844 AACTAGTCAAAAAGAGTTCGATGAAT 57.391 30.769 0.00 0.00 0.00 2.57
3609 3859 7.468141 TCTGACTAGCAAAGATGAAGTCTAA 57.532 36.000 10.87 1.11 39.74 2.10
3640 3890 8.548877 ACACTGGACTTTAACATATTGGAGTAT 58.451 33.333 0.00 0.00 0.00 2.12
3716 3986 1.312815 GAGACAAAGTGCAAGCAGGT 58.687 50.000 0.00 0.00 0.00 4.00
3797 4068 6.862090 ACACTAAAAGTCTAAAGTGACTAGCG 59.138 38.462 13.33 0.00 45.49 4.26
3888 4161 0.532862 AGTGGCACCTGACTCGTTTG 60.533 55.000 15.27 0.00 0.00 2.93
3893 4166 7.859325 TTAAATATAAAGTGGCACCTGACTC 57.141 36.000 15.27 0.00 0.00 3.36
4015 4288 6.725246 CGTTGGACAGAAGAGTAAACATTTT 58.275 36.000 0.00 0.00 0.00 1.82
4125 4398 2.888212 TCAAACTTGCAAGGGCCTTAT 58.112 42.857 29.18 4.47 40.13 1.73
4259 4532 2.680841 GGTTGCGCCACATGTTAATAGA 59.319 45.455 14.15 0.00 37.17 1.98
4511 4784 3.180507 AGAAGAGAAGGGCACTGATCTT 58.819 45.455 14.17 14.17 35.92 2.40
4568 4841 7.701501 GCATTGATTTTCTCCTCATTTCTCTTC 59.298 37.037 0.00 0.00 0.00 2.87
4677 4950 6.773200 ACGATTGTAATGAGATCTCACTAGGA 59.227 38.462 27.37 12.41 43.11 2.94
4808 5081 5.543714 TCACTAGCATTTTAGGTGTTCGAA 58.456 37.500 0.00 0.00 0.00 3.71
4905 5178 2.163412 GCAACCAACAGTGTCTTTGTGA 59.837 45.455 0.00 0.00 0.00 3.58
5210 5483 1.719600 ACAAGAATCTGCTCGACAGC 58.280 50.000 9.34 0.34 46.76 4.40
5661 5934 5.506317 CCAGAAACATTGTTGTGGAGAGTTC 60.506 44.000 19.69 5.09 43.08 3.01
5729 6002 5.127031 ACACACAGTTCTTTAAATTGCCACT 59.873 36.000 0.00 0.00 0.00 4.00
5730 6003 5.348164 ACACACAGTTCTTTAAATTGCCAC 58.652 37.500 0.00 0.00 0.00 5.01
5731 6004 5.590530 ACACACAGTTCTTTAAATTGCCA 57.409 34.783 0.00 0.00 0.00 4.92
5733 6006 7.518731 TCAAACACACAGTTCTTTAAATTGC 57.481 32.000 0.00 0.00 40.26 3.56
5734 6007 8.594687 CCTTCAAACACACAGTTCTTTAAATTG 58.405 33.333 0.00 0.00 40.26 2.32
5735 6008 8.527810 TCCTTCAAACACACAGTTCTTTAAATT 58.472 29.630 0.00 0.00 40.26 1.82
5736 6009 8.062065 TCCTTCAAACACACAGTTCTTTAAAT 57.938 30.769 0.00 0.00 40.26 1.40
5752 6181 5.529581 TTTGGGTTTCATCTCCTTCAAAC 57.470 39.130 0.00 0.00 0.00 2.93
5899 6328 3.393278 ACCACCACCACAACAACTACTAT 59.607 43.478 0.00 0.00 0.00 2.12
5901 6330 1.562475 ACCACCACCACAACAACTACT 59.438 47.619 0.00 0.00 0.00 2.57
5904 6333 0.039035 ACACCACCACCACAACAACT 59.961 50.000 0.00 0.00 0.00 3.16
5939 6371 7.924940 AGCAAAGCAAGATAATAGTAAAGAGC 58.075 34.615 0.00 0.00 0.00 4.09
6391 6823 0.108585 AAAAGAGAGGGAGTGCGCAA 59.891 50.000 14.00 0.00 0.00 4.85
6410 6842 9.853177 AGTCAGATAGAAGGAAAAGAAAAGAAA 57.147 29.630 0.00 0.00 0.00 2.52
6411 6843 9.277783 CAGTCAGATAGAAGGAAAAGAAAAGAA 57.722 33.333 0.00 0.00 0.00 2.52
6412 6844 8.651389 TCAGTCAGATAGAAGGAAAAGAAAAGA 58.349 33.333 0.00 0.00 0.00 2.52
6413 6845 8.839310 TCAGTCAGATAGAAGGAAAAGAAAAG 57.161 34.615 0.00 0.00 0.00 2.27
6414 6846 9.224267 CATCAGTCAGATAGAAGGAAAAGAAAA 57.776 33.333 0.00 0.00 34.43 2.29
6418 6850 7.326454 TGTCATCAGTCAGATAGAAGGAAAAG 58.674 38.462 0.00 0.00 34.43 2.27
6449 6882 1.188219 AACTCTCTTCTGGCTCCGCA 61.188 55.000 0.00 0.00 0.00 5.69
6468 6901 1.885887 GCCATAGCGCCATTTTCCATA 59.114 47.619 2.29 0.00 0.00 2.74
6519 6954 8.345565 ACAACAATAGAAACAGAAACAGACATC 58.654 33.333 0.00 0.00 0.00 3.06
6550 6985 3.536956 TTCAGAACAAAGACCAGACGT 57.463 42.857 0.00 0.00 0.00 4.34
6607 7043 3.230134 ACAACATTGCAGGAAAGCCTTA 58.770 40.909 0.00 0.00 43.90 2.69
6631 7068 2.973945 AGCTCCCGTCTGAAAATACAC 58.026 47.619 0.00 0.00 0.00 2.90
6632 7069 3.334691 CAAGCTCCCGTCTGAAAATACA 58.665 45.455 0.00 0.00 0.00 2.29
6633 7070 2.096013 GCAAGCTCCCGTCTGAAAATAC 59.904 50.000 0.00 0.00 0.00 1.89
6634 7071 2.356135 GCAAGCTCCCGTCTGAAAATA 58.644 47.619 0.00 0.00 0.00 1.40
6648 7085 2.965716 AAGGAGTTGGCACGCAAGCT 62.966 55.000 0.00 0.00 45.62 3.74
6649 7086 2.463675 GAAGGAGTTGGCACGCAAGC 62.464 60.000 0.00 0.00 45.62 4.01
6656 7093 2.047061 AGTACAGTGAAGGAGTTGGCA 58.953 47.619 0.00 0.00 0.00 4.92
6668 7105 7.847487 TGAAAGATACGTTTTTCAGTACAGTG 58.153 34.615 14.62 0.00 38.12 3.66
6701 7138 4.333372 ACGTTTTTCAGCTCCGTAGAAAAA 59.667 37.500 14.34 14.34 0.00 1.94
6702 7139 3.872771 ACGTTTTTCAGCTCCGTAGAAAA 59.127 39.130 5.13 5.13 0.00 2.29
6703 7140 3.460103 ACGTTTTTCAGCTCCGTAGAAA 58.540 40.909 0.00 0.00 0.00 2.52
6704 7141 3.102052 ACGTTTTTCAGCTCCGTAGAA 57.898 42.857 0.00 0.00 0.00 2.10
6705 7142 2.806608 ACGTTTTTCAGCTCCGTAGA 57.193 45.000 0.00 0.00 0.00 2.59
6706 7143 5.526010 AAATACGTTTTTCAGCTCCGTAG 57.474 39.130 0.00 0.00 37.42 3.51
6707 7144 6.158598 ACTAAATACGTTTTTCAGCTCCGTA 58.841 36.000 7.27 0.00 38.24 4.02
6708 7145 4.992951 ACTAAATACGTTTTTCAGCTCCGT 59.007 37.500 7.27 0.00 35.68 4.69
6709 7146 5.526010 ACTAAATACGTTTTTCAGCTCCG 57.474 39.130 7.27 0.00 0.00 4.63
6710 7147 9.667989 TTTAAACTAAATACGTTTTTCAGCTCC 57.332 29.630 7.27 0.00 36.18 4.70
6725 7162 9.914131 GCTGGTCATTCTTCTTTTAAACTAAAT 57.086 29.630 0.00 0.00 0.00 1.40
6726 7163 8.908903 TGCTGGTCATTCTTCTTTTAAACTAAA 58.091 29.630 0.00 0.00 0.00 1.85
6727 7164 8.458573 TGCTGGTCATTCTTCTTTTAAACTAA 57.541 30.769 0.00 0.00 0.00 2.24
6728 7165 7.308589 GCTGCTGGTCATTCTTCTTTTAAACTA 60.309 37.037 0.00 0.00 0.00 2.24
6771 7337 2.998670 GTTTGTACGGAGGAAACTAGCC 59.001 50.000 0.00 0.00 44.43 3.93
6824 7411 4.360027 GTCGTGTGTGCAGCAGCG 62.360 66.667 0.00 0.00 46.23 5.18
6825 7412 3.232645 CTGTCGTGTGTGCAGCAGC 62.233 63.158 0.00 0.00 42.57 5.25
6826 7413 0.597377 TACTGTCGTGTGTGCAGCAG 60.597 55.000 0.00 0.00 33.87 4.24
6827 7414 0.874175 GTACTGTCGTGTGTGCAGCA 60.874 55.000 0.00 0.00 33.87 4.41
6830 7417 0.173708 TGTGTACTGTCGTGTGTGCA 59.826 50.000 0.00 0.00 0.00 4.57
6831 7418 0.852777 CTGTGTACTGTCGTGTGTGC 59.147 55.000 0.00 0.00 0.00 4.57
6832 7419 0.852777 GCTGTGTACTGTCGTGTGTG 59.147 55.000 0.00 0.00 0.00 3.82
6833 7420 0.249322 GGCTGTGTACTGTCGTGTGT 60.249 55.000 0.00 0.00 0.00 3.72
6834 7421 1.275471 CGGCTGTGTACTGTCGTGTG 61.275 60.000 7.59 0.00 37.97 3.82
6835 7422 1.007734 CGGCTGTGTACTGTCGTGT 60.008 57.895 7.59 0.00 37.97 4.49
6836 7423 3.842602 CGGCTGTGTACTGTCGTG 58.157 61.111 7.59 0.00 37.97 4.35
6838 7425 1.070843 CAAAACGGCTGTGTACTGTCG 60.071 52.381 13.12 13.12 46.06 4.35
6840 7427 1.668751 CACAAAACGGCTGTGTACTGT 59.331 47.619 0.00 0.00 39.48 3.55
6841 7428 1.596954 GCACAAAACGGCTGTGTACTG 60.597 52.381 0.00 0.00 44.92 2.74
6843 7430 0.378962 TGCACAAAACGGCTGTGTAC 59.621 50.000 0.00 0.00 44.92 2.90
6844 7431 0.378962 GTGCACAAAACGGCTGTGTA 59.621 50.000 13.17 7.74 44.92 2.90
6846 7433 1.938814 CGTGCACAAAACGGCTGTG 60.939 57.895 18.64 0.00 45.71 3.66
6847 7434 1.444119 ATCGTGCACAAAACGGCTGT 61.444 50.000 18.64 0.00 41.34 4.40
6848 7435 0.725784 GATCGTGCACAAAACGGCTG 60.726 55.000 18.64 0.00 41.34 4.85
6849 7436 1.574428 GATCGTGCACAAAACGGCT 59.426 52.632 18.64 0.00 41.34 5.52
6850 7437 1.442017 GGATCGTGCACAAAACGGC 60.442 57.895 18.64 0.00 41.34 5.68
6851 7438 1.434555 TAGGATCGTGCACAAAACGG 58.565 50.000 18.64 0.00 41.34 4.44
6852 7439 3.124466 TCAATAGGATCGTGCACAAAACG 59.876 43.478 18.64 1.94 42.36 3.60
6853 7440 4.678509 TCAATAGGATCGTGCACAAAAC 57.321 40.909 18.64 4.02 0.00 2.43
6854 7441 5.484173 GATCAATAGGATCGTGCACAAAA 57.516 39.130 18.64 1.40 42.81 2.44
6865 7452 4.987963 TGCATGGTGAGATCAATAGGAT 57.012 40.909 0.00 0.00 39.53 3.24
6866 7453 4.648651 CATGCATGGTGAGATCAATAGGA 58.351 43.478 19.40 0.00 0.00 2.94
6867 7454 3.190744 GCATGCATGGTGAGATCAATAGG 59.809 47.826 27.34 0.00 0.00 2.57
6868 7455 3.818773 TGCATGCATGGTGAGATCAATAG 59.181 43.478 27.34 0.00 0.00 1.73
6869 7456 3.822940 TGCATGCATGGTGAGATCAATA 58.177 40.909 27.34 0.00 0.00 1.90
6870 7457 2.661718 TGCATGCATGGTGAGATCAAT 58.338 42.857 27.34 0.00 0.00 2.57
6871 7458 2.131776 TGCATGCATGGTGAGATCAA 57.868 45.000 27.34 0.00 0.00 2.57
6872 7459 2.358322 ATGCATGCATGGTGAGATCA 57.642 45.000 31.74 15.08 35.03 2.92
6882 7469 1.686587 CATCTTGTCCCATGCATGCAT 59.313 47.619 27.46 27.46 37.08 3.96
6883 7470 1.107945 CATCTTGTCCCATGCATGCA 58.892 50.000 25.04 25.04 0.00 3.96
6884 7471 1.395635 TCATCTTGTCCCATGCATGC 58.604 50.000 21.69 11.82 0.00 4.06
6885 7472 2.223735 GCTTCATCTTGTCCCATGCATG 60.224 50.000 20.19 20.19 0.00 4.06
6886 7473 2.029623 GCTTCATCTTGTCCCATGCAT 58.970 47.619 0.00 0.00 0.00 3.96
6887 7474 1.272037 TGCTTCATCTTGTCCCATGCA 60.272 47.619 0.00 0.00 0.00 3.96
6888 7475 1.404391 CTGCTTCATCTTGTCCCATGC 59.596 52.381 0.00 0.00 0.00 4.06
6889 7476 2.995283 TCTGCTTCATCTTGTCCCATG 58.005 47.619 0.00 0.00 0.00 3.66
6890 7477 3.350833 GTTCTGCTTCATCTTGTCCCAT 58.649 45.455 0.00 0.00 0.00 4.00
6891 7478 2.553028 GGTTCTGCTTCATCTTGTCCCA 60.553 50.000 0.00 0.00 0.00 4.37
6892 7479 2.087646 GGTTCTGCTTCATCTTGTCCC 58.912 52.381 0.00 0.00 0.00 4.46
6893 7480 1.734465 CGGTTCTGCTTCATCTTGTCC 59.266 52.381 0.00 0.00 0.00 4.02
6894 7481 1.129437 GCGGTTCTGCTTCATCTTGTC 59.871 52.381 0.00 0.00 0.00 3.18
6895 7482 1.160137 GCGGTTCTGCTTCATCTTGT 58.840 50.000 0.00 0.00 0.00 3.16
6896 7483 1.129998 CAGCGGTTCTGCTTCATCTTG 59.870 52.381 3.16 0.00 44.46 3.02
6897 7484 1.446907 CAGCGGTTCTGCTTCATCTT 58.553 50.000 3.16 0.00 44.46 2.40
6898 7485 0.392193 CCAGCGGTTCTGCTTCATCT 60.392 55.000 3.16 0.00 44.46 2.90
6899 7486 0.391661 TCCAGCGGTTCTGCTTCATC 60.392 55.000 3.16 0.00 44.46 2.92
6900 7487 0.254178 ATCCAGCGGTTCTGCTTCAT 59.746 50.000 3.16 0.00 44.46 2.57
6901 7488 0.674581 CATCCAGCGGTTCTGCTTCA 60.675 55.000 3.16 0.00 44.46 3.02
6902 7489 0.391661 TCATCCAGCGGTTCTGCTTC 60.392 55.000 3.16 0.00 44.46 3.86
6903 7490 0.036732 TTCATCCAGCGGTTCTGCTT 59.963 50.000 3.16 0.00 44.46 3.91
6905 7492 0.169009 GTTTCATCCAGCGGTTCTGC 59.831 55.000 0.00 0.00 41.50 4.26
6906 7493 1.466167 CTGTTTCATCCAGCGGTTCTG 59.534 52.381 0.00 0.00 42.49 3.02
6907 7494 1.347707 TCTGTTTCATCCAGCGGTTCT 59.652 47.619 0.00 0.00 0.00 3.01
6908 7495 1.464997 GTCTGTTTCATCCAGCGGTTC 59.535 52.381 0.00 0.00 0.00 3.62
6909 7496 1.202758 TGTCTGTTTCATCCAGCGGTT 60.203 47.619 0.00 0.00 0.00 4.44
6910 7497 0.396435 TGTCTGTTTCATCCAGCGGT 59.604 50.000 0.00 0.00 0.00 5.68
6911 7498 1.081892 CTGTCTGTTTCATCCAGCGG 58.918 55.000 0.00 0.00 0.00 5.52
6912 7499 1.081892 CCTGTCTGTTTCATCCAGCG 58.918 55.000 0.00 0.00 0.00 5.18
6913 7500 2.479566 TCCTGTCTGTTTCATCCAGC 57.520 50.000 0.00 0.00 0.00 4.85
6914 7501 5.972107 ATTTTCCTGTCTGTTTCATCCAG 57.028 39.130 0.00 0.00 0.00 3.86
6915 7502 6.729690 AAATTTTCCTGTCTGTTTCATCCA 57.270 33.333 0.00 0.00 0.00 3.41
6917 7504 9.508567 GCTATAAATTTTCCTGTCTGTTTCATC 57.491 33.333 0.00 0.00 0.00 2.92
6918 7505 8.184192 CGCTATAAATTTTCCTGTCTGTTTCAT 58.816 33.333 0.00 0.00 0.00 2.57
6919 7506 7.174253 ACGCTATAAATTTTCCTGTCTGTTTCA 59.826 33.333 0.00 0.00 0.00 2.69
6920 7507 7.527457 ACGCTATAAATTTTCCTGTCTGTTTC 58.473 34.615 0.00 0.00 0.00 2.78
6921 7508 7.448748 ACGCTATAAATTTTCCTGTCTGTTT 57.551 32.000 0.00 0.00 0.00 2.83
6922 7509 7.448748 AACGCTATAAATTTTCCTGTCTGTT 57.551 32.000 0.00 0.00 0.00 3.16
6925 7512 6.625081 GCCAAACGCTATAAATTTTCCTGTCT 60.625 38.462 0.00 0.00 0.00 3.41
6946 7533 1.678598 CCCCCGTAGTATGTCGCCAA 61.679 60.000 0.00 0.00 0.00 4.52
6991 7578 8.793472 GTTTAACAAACATTTTTCCAATTGTGC 58.207 29.630 4.43 0.00 41.04 4.57
7022 7638 0.874390 CCGTTCTGTGTCCAACATGG 59.126 55.000 0.00 0.00 38.39 3.66
7027 7643 1.414550 TCATGTCCGTTCTGTGTCCAA 59.585 47.619 0.00 0.00 0.00 3.53
7131 7747 0.099436 GCAAAGATACGCAAGGCAGG 59.901 55.000 0.00 0.00 46.39 4.85
7164 7780 6.889301 AGTCCTGCATTATTTCCATGTATG 57.111 37.500 0.00 0.00 0.00 2.39
7190 7806 3.678056 TGGAGTACATTTCTTGACGCT 57.322 42.857 0.00 0.00 0.00 5.07
7195 7811 6.540189 AGAAATCGGATGGAGTACATTTCTTG 59.460 38.462 7.40 0.00 40.72 3.02
7231 7847 8.869109 TCATTTCAAAATAGATGACCCAACTTT 58.131 29.630 0.00 0.00 0.00 2.66
7232 7848 8.421249 TCATTTCAAAATAGATGACCCAACTT 57.579 30.769 0.00 0.00 0.00 2.66
7233 7849 8.421249 TTCATTTCAAAATAGATGACCCAACT 57.579 30.769 0.00 0.00 0.00 3.16
7234 7850 9.143631 CTTTCATTTCAAAATAGATGACCCAAC 57.856 33.333 0.00 0.00 0.00 3.77
7235 7851 8.313292 CCTTTCATTTCAAAATAGATGACCCAA 58.687 33.333 0.00 0.00 0.00 4.12
7236 7852 7.673504 TCCTTTCATTTCAAAATAGATGACCCA 59.326 33.333 0.00 0.00 0.00 4.51
7237 7853 8.066612 TCCTTTCATTTCAAAATAGATGACCC 57.933 34.615 0.00 0.00 0.00 4.46
7238 7854 8.743714 ACTCCTTTCATTTCAAAATAGATGACC 58.256 33.333 0.00 0.00 0.00 4.02
7258 7874 9.269453 GCCAAAACGTCTTATATTATACTCCTT 57.731 33.333 0.00 0.00 0.00 3.36
7259 7875 8.426489 TGCCAAAACGTCTTATATTATACTCCT 58.574 33.333 0.00 0.00 0.00 3.69
7260 7876 8.597662 TGCCAAAACGTCTTATATTATACTCC 57.402 34.615 0.00 0.00 0.00 3.85
7261 7877 9.257651 ACTGCCAAAACGTCTTATATTATACTC 57.742 33.333 0.00 0.00 0.00 2.59
7262 7878 9.609346 AACTGCCAAAACGTCTTATATTATACT 57.391 29.630 0.00 0.00 0.00 2.12
7268 7884 9.567848 CAATTAAACTGCCAAAACGTCTTATAT 57.432 29.630 0.00 0.00 0.00 0.86
7269 7885 8.784994 TCAATTAAACTGCCAAAACGTCTTATA 58.215 29.630 0.00 0.00 0.00 0.98
7270 7886 7.653647 TCAATTAAACTGCCAAAACGTCTTAT 58.346 30.769 0.00 0.00 0.00 1.73
7271 7887 7.028926 TCAATTAAACTGCCAAAACGTCTTA 57.971 32.000 0.00 0.00 0.00 2.10
7272 7888 5.897050 TCAATTAAACTGCCAAAACGTCTT 58.103 33.333 0.00 0.00 0.00 3.01
7273 7889 5.508200 TCAATTAAACTGCCAAAACGTCT 57.492 34.783 0.00 0.00 0.00 4.18
7274 7890 5.051307 GGTTCAATTAAACTGCCAAAACGTC 60.051 40.000 0.00 0.00 0.00 4.34
7275 7891 4.806775 GGTTCAATTAAACTGCCAAAACGT 59.193 37.500 0.00 0.00 0.00 3.99
7276 7892 4.085312 CGGTTCAATTAAACTGCCAAAACG 60.085 41.667 0.00 0.00 0.00 3.60
7277 7893 4.806775 ACGGTTCAATTAAACTGCCAAAAC 59.193 37.500 0.00 0.00 38.79 2.43
7278 7894 5.012328 ACGGTTCAATTAAACTGCCAAAA 57.988 34.783 0.00 0.00 38.79 2.44
7279 7895 4.098044 TGACGGTTCAATTAAACTGCCAAA 59.902 37.500 0.00 0.00 38.79 3.28
7280 7896 3.632604 TGACGGTTCAATTAAACTGCCAA 59.367 39.130 0.00 0.00 38.79 4.52
7281 7897 3.215151 TGACGGTTCAATTAAACTGCCA 58.785 40.909 0.00 0.00 38.79 4.92
7282 7898 3.907894 TGACGGTTCAATTAAACTGCC 57.092 42.857 0.00 0.00 38.79 4.85
7283 7899 4.602995 TGTTGACGGTTCAATTAAACTGC 58.397 39.130 0.00 0.00 43.72 4.40
7284 7900 6.205784 ACATGTTGACGGTTCAATTAAACTG 58.794 36.000 0.00 0.00 43.72 3.16
7285 7901 6.038825 TGACATGTTGACGGTTCAATTAAACT 59.961 34.615 0.00 0.00 43.72 2.66
7286 7902 6.202937 TGACATGTTGACGGTTCAATTAAAC 58.797 36.000 0.00 0.00 43.72 2.01
7287 7903 6.378710 TGACATGTTGACGGTTCAATTAAA 57.621 33.333 0.00 0.00 43.72 1.52
7288 7904 6.567687 ATGACATGTTGACGGTTCAATTAA 57.432 33.333 0.00 0.00 43.72 1.40
7289 7905 7.857734 ATATGACATGTTGACGGTTCAATTA 57.142 32.000 0.00 0.00 43.72 1.40
7290 7906 6.757897 ATATGACATGTTGACGGTTCAATT 57.242 33.333 0.00 0.00 43.72 2.32
7291 7907 8.450578 AATATATGACATGTTGACGGTTCAAT 57.549 30.769 0.00 0.00 43.72 2.57
7292 7908 7.857734 AATATATGACATGTTGACGGTTCAA 57.142 32.000 0.00 0.00 39.55 2.69
7293 7909 7.857734 AAATATATGACATGTTGACGGTTCA 57.142 32.000 0.00 0.00 0.00 3.18
7319 7935 9.031360 CGCACACACTAATACTATCACTATTTT 57.969 33.333 0.00 0.00 0.00 1.82
7320 7936 7.169308 GCGCACACACTAATACTATCACTATTT 59.831 37.037 0.30 0.00 0.00 1.40
7321 7937 6.641314 GCGCACACACTAATACTATCACTATT 59.359 38.462 0.30 0.00 0.00 1.73
7322 7938 6.150318 GCGCACACACTAATACTATCACTAT 58.850 40.000 0.30 0.00 0.00 2.12
7323 7939 5.066764 TGCGCACACACTAATACTATCACTA 59.933 40.000 5.66 0.00 0.00 2.74
7324 7940 4.142249 TGCGCACACACTAATACTATCACT 60.142 41.667 5.66 0.00 0.00 3.41
7325 7941 4.109766 TGCGCACACACTAATACTATCAC 58.890 43.478 5.66 0.00 0.00 3.06
7326 7942 4.379339 TGCGCACACACTAATACTATCA 57.621 40.909 5.66 0.00 0.00 2.15
7327 7943 4.318121 GCTTGCGCACACACTAATACTATC 60.318 45.833 11.12 0.00 35.78 2.08
7328 7944 3.555956 GCTTGCGCACACACTAATACTAT 59.444 43.478 11.12 0.00 35.78 2.12
7329 7945 2.927477 GCTTGCGCACACACTAATACTA 59.073 45.455 11.12 0.00 35.78 1.82
7330 7946 1.732259 GCTTGCGCACACACTAATACT 59.268 47.619 11.12 0.00 35.78 2.12
7331 7947 1.732259 AGCTTGCGCACACACTAATAC 59.268 47.619 11.12 0.00 39.10 1.89
7332 7948 1.999735 GAGCTTGCGCACACACTAATA 59.000 47.619 11.12 0.00 39.10 0.98
7333 7949 0.798776 GAGCTTGCGCACACACTAAT 59.201 50.000 11.12 0.00 39.10 1.73
7334 7950 0.531753 TGAGCTTGCGCACACACTAA 60.532 50.000 11.12 0.00 39.10 2.24
7335 7951 0.945743 CTGAGCTTGCGCACACACTA 60.946 55.000 11.12 0.00 39.10 2.74
7336 7952 2.203056 TGAGCTTGCGCACACACT 60.203 55.556 11.12 4.71 39.10 3.55
7337 7953 2.250485 CTGAGCTTGCGCACACAC 59.750 61.111 11.12 4.20 39.10 3.82
7353 7969 2.152830 CGGCCGTAGATAGTCTAAGCT 58.847 52.381 19.50 0.00 33.45 3.74
7354 7970 1.199558 CCGGCCGTAGATAGTCTAAGC 59.800 57.143 26.12 3.06 32.64 3.09
7356 7972 1.901591 CCCGGCCGTAGATAGTCTAA 58.098 55.000 26.12 0.00 29.58 2.10
7357 7973 0.607489 GCCCGGCCGTAGATAGTCTA 60.607 60.000 26.12 0.00 0.00 2.59
7358 7974 1.902432 GCCCGGCCGTAGATAGTCT 60.902 63.158 26.12 0.00 0.00 3.24
7359 7975 1.461911 AAGCCCGGCCGTAGATAGTC 61.462 60.000 26.12 0.00 0.00 2.59
7360 7976 1.457079 AAGCCCGGCCGTAGATAGT 60.457 57.895 26.12 0.00 0.00 2.12
7361 7977 1.006102 CAAGCCCGGCCGTAGATAG 60.006 63.158 26.12 7.18 0.00 2.08
7362 7978 2.504274 CCAAGCCCGGCCGTAGATA 61.504 63.158 26.12 0.00 0.00 1.98
7369 7988 3.147595 GATTTCCCAAGCCCGGCC 61.148 66.667 5.55 0.00 0.00 6.13
7370 7989 3.147595 GGATTTCCCAAGCCCGGC 61.148 66.667 0.00 0.00 31.56 6.13
7378 7997 3.502979 CGTTTAAAAGACCGGATTTCCCA 59.497 43.478 9.46 0.00 34.14 4.37
7381 8000 4.667415 CGGACGTTTAAAAGACCGGATTTC 60.667 45.833 27.35 0.00 40.48 2.17
7392 8011 2.067766 CGGATCCACGGACGTTTAAAA 58.932 47.619 13.41 0.00 0.00 1.52
7402 8021 2.335369 GATCGGACGGATCCACGG 59.665 66.667 13.41 9.55 46.67 4.94
7409 8028 2.498941 GGGCTCATGATCGGACGGA 61.499 63.158 0.00 0.00 0.00 4.69
7410 8029 2.029666 GGGCTCATGATCGGACGG 59.970 66.667 0.00 0.00 0.00 4.79
7411 8030 0.461870 TTTGGGCTCATGATCGGACG 60.462 55.000 0.00 0.00 0.00 4.79
7415 8034 0.379669 GCTGTTTGGGCTCATGATCG 59.620 55.000 0.00 0.00 0.00 3.69
7417 8036 0.322816 ACGCTGTTTGGGCTCATGAT 60.323 50.000 0.00 0.00 0.00 2.45
7419 8038 0.387622 CAACGCTGTTTGGGCTCATG 60.388 55.000 0.00 0.00 0.00 3.07
7424 8043 0.667184 CCATTCAACGCTGTTTGGGC 60.667 55.000 2.97 0.00 0.00 5.36
7430 8049 0.613260 TAGGAGCCATTCAACGCTGT 59.387 50.000 0.00 0.00 34.84 4.40
7434 8053 2.016318 TGCAATAGGAGCCATTCAACG 58.984 47.619 0.00 0.00 0.00 4.10
7436 8055 3.084536 TGTGCAATAGGAGCCATTCAA 57.915 42.857 0.00 0.00 0.00 2.69
7439 8058 3.091633 AGTTGTGCAATAGGAGCCATT 57.908 42.857 0.00 0.00 0.00 3.16
7440 8059 2.814805 AGTTGTGCAATAGGAGCCAT 57.185 45.000 0.00 0.00 0.00 4.40
7468 8098 8.908678 CGTGCATGGATTTGAAATTCTTATATG 58.091 33.333 0.00 0.00 0.00 1.78
7469 8099 8.084073 CCGTGCATGGATTTGAAATTCTTATAT 58.916 33.333 21.08 0.00 0.00 0.86
7473 8103 4.021192 ACCGTGCATGGATTTGAAATTCTT 60.021 37.500 31.74 0.55 0.00 2.52
7475 8105 3.848726 ACCGTGCATGGATTTGAAATTC 58.151 40.909 31.74 0.00 0.00 2.17
7481 8111 0.521291 AACGACCGTGCATGGATTTG 59.479 50.000 31.74 15.87 0.00 2.32
7607 8237 0.751643 GTGAACCCATAGCGGCCAAT 60.752 55.000 2.24 0.00 0.00 3.16
7608 8238 1.377987 GTGAACCCATAGCGGCCAA 60.378 57.895 2.24 0.00 0.00 4.52
7609 8239 1.920734 ATGTGAACCCATAGCGGCCA 61.921 55.000 2.24 0.00 0.00 5.36
7610 8240 0.107831 TATGTGAACCCATAGCGGCC 59.892 55.000 0.00 0.00 0.00 6.13
7611 8241 1.806542 CATATGTGAACCCATAGCGGC 59.193 52.381 0.00 0.00 31.19 6.53
7612 8242 1.806542 GCATATGTGAACCCATAGCGG 59.193 52.381 4.29 0.00 31.19 5.52
7613 8243 2.738846 GAGCATATGTGAACCCATAGCG 59.261 50.000 4.29 0.00 31.19 4.26
7614 8244 3.077359 GGAGCATATGTGAACCCATAGC 58.923 50.000 4.29 0.00 31.19 2.97
7615 8245 4.067896 GTGGAGCATATGTGAACCCATAG 58.932 47.826 4.29 0.00 31.19 2.23
7616 8246 3.494223 CGTGGAGCATATGTGAACCCATA 60.494 47.826 4.29 0.00 0.00 2.74
7617 8247 2.746142 CGTGGAGCATATGTGAACCCAT 60.746 50.000 4.29 0.00 0.00 4.00
7618 8248 1.406751 CGTGGAGCATATGTGAACCCA 60.407 52.381 4.29 2.58 0.00 4.51
7619 8249 1.134521 TCGTGGAGCATATGTGAACCC 60.135 52.381 4.29 0.04 0.00 4.11
7620 8250 2.205074 CTCGTGGAGCATATGTGAACC 58.795 52.381 4.29 3.99 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.