Multiple sequence alignment - TraesCS1A01G228400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G228400 chr1A 100.000 3216 0 0 1 3216 399593856 399590641 0.000000e+00 5939.0
1 TraesCS1A01G228400 chr1D 93.014 1274 47 11 675 1919 318479326 318478066 0.000000e+00 1821.0
2 TraesCS1A01G228400 chr1D 91.029 836 67 5 2384 3216 318476839 318476009 0.000000e+00 1122.0
3 TraesCS1A01G228400 chr1D 93.522 247 16 0 433 679 318479947 318479701 5.070000e-98 368.0
4 TraesCS1A01G228400 chr1D 80.328 305 45 7 2818 3110 55609053 55608752 1.940000e-52 217.0
5 TraesCS1A01G228400 chr1D 78.667 300 44 12 2818 3110 55544877 55544591 7.090000e-42 182.0
6 TraesCS1A01G228400 chr1B 89.272 1510 61 27 489 1936 430348315 430346845 0.000000e+00 1797.0
7 TraesCS1A01G228400 chr1B 86.439 966 86 16 1 931 430453522 430452567 0.000000e+00 1016.0
8 TraesCS1A01G228400 chr1B 83.871 403 42 13 95 491 430349219 430348834 2.360000e-96 363.0
9 TraesCS1A01G228400 chr1B 85.304 313 42 4 1934 2245 6872920 6873229 1.440000e-83 320.0
10 TraesCS1A01G228400 chr1B 81.230 309 41 11 2818 3110 504238420 504238113 1.930000e-57 233.0
11 TraesCS1A01G228400 chr1B 79.630 108 22 0 3103 3210 416750472 416750579 9.570000e-11 78.7
12 TraesCS1A01G228400 chr5D 89.032 310 28 4 1934 2242 45488301 45487997 2.340000e-101 379.0
13 TraesCS1A01G228400 chr5D 80.916 131 8 7 2244 2357 393559149 393559019 1.590000e-13 87.9
14 TraesCS1A01G228400 chr7D 87.702 309 35 3 1934 2242 63446871 63446566 1.100000e-94 357.0
15 TraesCS1A01G228400 chr7D 84.375 64 8 2 3154 3216 161451938 161451876 9.630000e-06 62.1
16 TraesCS1A01G228400 chr4D 86.731 309 38 3 1934 2242 464509062 464509367 1.100000e-89 340.0
17 TraesCS1A01G228400 chr4D 80.392 306 45 7 2818 3110 441910305 441910608 5.400000e-53 219.0
18 TraesCS1A01G228400 chr4D 79.470 302 48 8 2818 3106 441920444 441920744 5.440000e-48 202.0
19 TraesCS1A01G228400 chr4D 84.298 121 12 2 2244 2357 354879740 354879620 9.430000e-21 111.0
20 TraesCS1A01G228400 chr2B 87.266 267 30 3 1980 2246 613069076 613068814 5.210000e-78 302.0
21 TraesCS1A01G228400 chr2B 80.132 302 47 10 2820 3110 208618113 208617814 2.510000e-51 213.0
22 TraesCS1A01G228400 chr2B 81.343 134 9 7 2242 2359 351605549 351605416 9.500000e-16 95.3
23 TraesCS1A01G228400 chr3A 85.036 274 39 2 1973 2246 108717159 108716888 8.790000e-71 278.0
24 TraesCS1A01G228400 chr3A 97.500 40 1 0 10 49 357089856 357089817 5.760000e-08 69.4
25 TraesCS1A01G228400 chr6B 82.838 303 41 7 1945 2242 133391388 133391092 8.850000e-66 261.0
26 TraesCS1A01G228400 chr6B 87.931 116 14 0 2244 2359 123935181 123935296 1.560000e-28 137.0
27 TraesCS1A01G228400 chr5A 79.933 299 52 4 2818 3110 318762389 318762093 2.510000e-51 213.0
28 TraesCS1A01G228400 chr5A 88.235 136 13 3 2033 2168 536298156 536298024 3.320000e-35 159.0
29 TraesCS1A01G228400 chr2D 91.176 136 11 1 1934 2069 521875701 521875835 1.970000e-42 183.0
30 TraesCS1A01G228400 chr2D 92.647 68 4 1 2242 2309 190032755 190032821 2.640000e-16 97.1
31 TraesCS1A01G228400 chr5B 78.073 301 53 9 2817 3105 243378632 243378931 9.170000e-41 178.0
32 TraesCS1A01G228400 chr5B 92.308 52 4 0 2193 2244 276662983 276662932 1.240000e-09 75.0
33 TraesCS1A01G228400 chr4A 88.793 116 13 0 2244 2359 648977030 648977145 3.340000e-30 143.0
34 TraesCS1A01G228400 chr7B 100.000 30 0 0 114 143 9636971 9636942 4.480000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G228400 chr1A 399590641 399593856 3215 True 5939.000000 5939 100.000000 1 3216 1 chr1A.!!$R1 3215
1 TraesCS1A01G228400 chr1D 318476009 318479947 3938 True 1103.666667 1821 92.521667 433 3216 3 chr1D.!!$R3 2783
2 TraesCS1A01G228400 chr1B 430346845 430349219 2374 True 1080.000000 1797 86.571500 95 1936 2 chr1B.!!$R3 1841
3 TraesCS1A01G228400 chr1B 430452567 430453522 955 True 1016.000000 1016 86.439000 1 931 1 chr1B.!!$R1 930

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 299 0.321564 TGTCCGCTTTGTGGATCAGG 60.322 55.0 3.07 0.0 44.4 3.86 F
1948 2942 0.036671 AGTAAGGCCGTGCTTGGTAC 60.037 55.0 2.88 0.0 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1958 2952 0.027696 ATCCCCCATCAATCCCCTCA 60.028 55.0 0.00 0.0 0.0 3.86 R
2838 4597 0.113190 AATGGCTATTAGGCTGGCCC 59.887 55.0 17.14 0.0 41.8 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.079478 GGGGTGTCCGGGTCCTAC 61.079 72.222 0.00 0.00 0.00 3.18
18 19 2.284112 GGGTGTCCGGGTCCTACA 60.284 66.667 0.00 0.00 0.00 2.74
22 23 0.388294 GTGTCCGGGTCCTACATAGC 59.612 60.000 0.00 0.00 0.00 2.97
27 28 1.202533 CCGGGTCCTACATAGCTGTTG 60.203 57.143 0.00 0.00 36.79 3.33
49 50 4.035102 GACTCCCGCAAAGCCCCT 62.035 66.667 0.00 0.00 0.00 4.79
50 51 2.609610 ACTCCCGCAAAGCCCCTA 60.610 61.111 0.00 0.00 0.00 3.53
51 52 2.193087 GACTCCCGCAAAGCCCCTAA 62.193 60.000 0.00 0.00 0.00 2.69
55 56 2.355115 CGCAAAGCCCCTAACCCT 59.645 61.111 0.00 0.00 0.00 4.34
56 57 1.749258 CGCAAAGCCCCTAACCCTC 60.749 63.158 0.00 0.00 0.00 4.30
57 58 1.382629 GCAAAGCCCCTAACCCTCA 59.617 57.895 0.00 0.00 0.00 3.86
61 62 2.612746 GCCCCTAACCCTCACCCA 60.613 66.667 0.00 0.00 0.00 4.51
64 65 1.916777 CCCTAACCCTCACCCACGT 60.917 63.158 0.00 0.00 0.00 4.49
65 66 1.295423 CCTAACCCTCACCCACGTG 59.705 63.158 9.08 9.08 41.72 4.49
66 67 1.477685 CCTAACCCTCACCCACGTGT 61.478 60.000 15.65 0.00 41.09 4.49
85 86 1.598601 GTGCACGTTTTTCTCGGGTTA 59.401 47.619 0.00 0.00 33.97 2.85
103 104 3.490526 GGTTACACGAAAAAGTGCGTCTA 59.509 43.478 0.00 0.00 45.45 2.59
176 192 3.695606 GTGCAGGCGGTCTGAGGA 61.696 66.667 14.91 0.00 46.18 3.71
191 207 2.011947 TGAGGATGCGCTTTGAAGATG 58.988 47.619 9.73 0.00 0.00 2.90
208 224 7.523293 TGAAGATGCCTTTAACTTTGAATGA 57.477 32.000 0.00 0.00 31.62 2.57
213 229 3.504520 GCCTTTAACTTTGAATGACCGGA 59.495 43.478 9.46 0.00 0.00 5.14
219 235 4.408182 ACTTTGAATGACCGGATCCTAG 57.592 45.455 9.46 3.46 0.00 3.02
238 254 4.391216 CCTAGATCAGTGTTTGCAGACTTG 59.609 45.833 9.02 7.41 0.00 3.16
242 258 2.092968 TCAGTGTTTGCAGACTTGTCCT 60.093 45.455 9.02 0.00 0.00 3.85
244 260 3.129287 CAGTGTTTGCAGACTTGTCCTTT 59.871 43.478 9.02 0.00 0.00 3.11
250 266 2.703536 TGCAGACTTGTCCTTTAGTCCA 59.296 45.455 0.00 0.00 41.31 4.02
270 286 2.662150 GGACGAATACAGTGTCCGC 58.338 57.895 0.00 0.00 42.42 5.54
275 291 2.066262 CGAATACAGTGTCCGCTTTGT 58.934 47.619 0.00 0.00 0.00 2.83
283 299 0.321564 TGTCCGCTTTGTGGATCAGG 60.322 55.000 3.07 0.00 44.40 3.86
309 325 0.815615 GATGCCCTAACCTCCAAGCG 60.816 60.000 0.00 0.00 0.00 4.68
374 390 6.377712 CCATGGCCCATTTACATTTTGAAATT 59.622 34.615 0.00 0.00 0.00 1.82
376 392 7.211966 TGGCCCATTTACATTTTGAAATTTG 57.788 32.000 0.00 0.00 0.00 2.32
377 393 6.774656 TGGCCCATTTACATTTTGAAATTTGT 59.225 30.769 0.00 0.00 0.00 2.83
378 394 7.939039 TGGCCCATTTACATTTTGAAATTTGTA 59.061 29.630 0.00 0.00 0.00 2.41
379 395 8.450180 GGCCCATTTACATTTTGAAATTTGTAG 58.550 33.333 0.00 0.00 0.00 2.74
400 416 8.752766 TGTAGTACACTATTTTTACTGTCTGC 57.247 34.615 0.00 0.00 0.00 4.26
415 434 4.876107 ACTGTCTGCGTCCTTAATTAATGG 59.124 41.667 0.00 3.26 0.00 3.16
531 1071 4.058817 GACCATTGTCTCAGTTTCGTTCT 58.941 43.478 0.00 0.00 38.53 3.01
581 1121 2.095008 TCTCACTCGATTCAGTGCACTC 60.095 50.000 18.64 4.92 43.18 3.51
617 1160 6.710597 ACTACTACTCTGTTCTGAAACACA 57.289 37.500 0.00 0.00 40.45 3.72
699 1621 1.309950 CTCCATCATCAAGCAGCAGG 58.690 55.000 0.00 0.00 0.00 4.85
861 1803 1.447838 CGGCTGCAACGGTCACTAT 60.448 57.895 0.50 0.00 0.00 2.12
862 1804 1.019278 CGGCTGCAACGGTCACTATT 61.019 55.000 0.50 0.00 0.00 1.73
1019 1989 6.743575 ACTGCTACAAAGAAAATATTCGCT 57.256 33.333 0.00 0.00 40.63 4.93
1080 2062 2.474561 CGTACTCGGCTGTGGAGTA 58.525 57.895 0.00 6.05 42.69 2.59
1250 2232 2.426738 CAGCTGGTCAGTCTCCTCTTAG 59.573 54.545 5.57 0.00 0.00 2.18
1263 2245 3.618351 TCCTCTTAGTTAGTCAGTCCCG 58.382 50.000 0.00 0.00 0.00 5.14
1283 2265 2.480419 CGCGTCAATTTCTCAGTTTCCT 59.520 45.455 0.00 0.00 0.00 3.36
1284 2266 3.678072 CGCGTCAATTTCTCAGTTTCCTA 59.322 43.478 0.00 0.00 0.00 2.94
1285 2267 4.151689 CGCGTCAATTTCTCAGTTTCCTAA 59.848 41.667 0.00 0.00 0.00 2.69
1286 2268 5.163854 CGCGTCAATTTCTCAGTTTCCTAAT 60.164 40.000 0.00 0.00 0.00 1.73
1287 2269 6.612306 GCGTCAATTTCTCAGTTTCCTAATT 58.388 36.000 0.00 0.00 0.00 1.40
1288 2270 7.412563 CGCGTCAATTTCTCAGTTTCCTAATTA 60.413 37.037 0.00 0.00 0.00 1.40
1289 2271 8.234546 GCGTCAATTTCTCAGTTTCCTAATTAA 58.765 33.333 0.00 0.00 0.00 1.40
1579 2564 3.969802 GGTGCTGCTGCTGCGTTT 61.970 61.111 23.38 0.00 43.34 3.60
1720 2705 2.424956 GGTCCGAGTTCCGTATGTTAGT 59.575 50.000 0.00 0.00 36.31 2.24
1894 2888 7.066525 TGAGAGGTGTATTTCTTGTTCGTTTTT 59.933 33.333 0.00 0.00 0.00 1.94
1921 2915 3.213506 CTTGGACCACATGTCAGTCAAA 58.786 45.455 21.33 17.03 46.38 2.69
1923 2917 3.625853 TGGACCACATGTCAGTCAAAAA 58.374 40.909 21.33 6.62 46.38 1.94
1926 2920 5.221224 TGGACCACATGTCAGTCAAAAATTC 60.221 40.000 21.33 7.79 46.38 2.17
1929 2923 4.039004 CCACATGTCAGTCAAAAATTCCCA 59.961 41.667 0.00 0.00 0.00 4.37
1930 2924 5.224888 CACATGTCAGTCAAAAATTCCCAG 58.775 41.667 0.00 0.00 0.00 4.45
1931 2925 4.895297 ACATGTCAGTCAAAAATTCCCAGT 59.105 37.500 0.00 0.00 0.00 4.00
1932 2926 6.016360 CACATGTCAGTCAAAAATTCCCAGTA 60.016 38.462 0.00 0.00 0.00 2.74
1936 2930 4.522789 TCAGTCAAAAATTCCCAGTAAGGC 59.477 41.667 0.00 0.00 35.39 4.35
1938 2932 2.823154 TCAAAAATTCCCAGTAAGGCCG 59.177 45.455 0.00 0.00 35.39 6.13
1939 2933 2.560981 CAAAAATTCCCAGTAAGGCCGT 59.439 45.455 0.00 0.00 35.39 5.68
1940 2934 1.834188 AAATTCCCAGTAAGGCCGTG 58.166 50.000 0.00 0.00 35.39 4.94
1942 2936 1.562672 ATTCCCAGTAAGGCCGTGCT 61.563 55.000 2.88 2.88 35.39 4.40
1943 2937 1.774894 TTCCCAGTAAGGCCGTGCTT 61.775 55.000 6.54 0.00 35.39 3.91
1945 2939 2.040544 CCAGTAAGGCCGTGCTTGG 61.041 63.158 6.54 8.48 0.00 3.61
1946 2940 1.302511 CAGTAAGGCCGTGCTTGGT 60.303 57.895 6.54 0.00 0.00 3.67
1947 2941 0.036765 CAGTAAGGCCGTGCTTGGTA 60.037 55.000 6.54 0.00 0.00 3.25
1948 2942 0.036671 AGTAAGGCCGTGCTTGGTAC 60.037 55.000 2.88 0.00 0.00 3.34
1949 2943 0.036671 GTAAGGCCGTGCTTGGTACT 60.037 55.000 0.00 0.00 0.00 2.73
1950 2944 1.205417 GTAAGGCCGTGCTTGGTACTA 59.795 52.381 0.00 0.00 0.00 1.82
1953 2947 1.153429 GCCGTGCTTGGTACTAGGG 60.153 63.158 0.00 0.00 0.00 3.53
1954 2948 1.896122 GCCGTGCTTGGTACTAGGGT 61.896 60.000 0.00 0.00 0.00 4.34
1955 2949 0.611714 CCGTGCTTGGTACTAGGGTT 59.388 55.000 0.00 0.00 0.00 4.11
1956 2950 1.002773 CCGTGCTTGGTACTAGGGTTT 59.997 52.381 0.00 0.00 0.00 3.27
1957 2951 2.551504 CCGTGCTTGGTACTAGGGTTTT 60.552 50.000 0.00 0.00 0.00 2.43
1958 2952 3.143728 CGTGCTTGGTACTAGGGTTTTT 58.856 45.455 0.00 0.00 0.00 1.94
1959 2953 3.058501 CGTGCTTGGTACTAGGGTTTTTG 60.059 47.826 0.00 0.00 0.00 2.44
1960 2954 4.139038 GTGCTTGGTACTAGGGTTTTTGA 58.861 43.478 0.00 0.00 0.00 2.69
1961 2955 4.215613 GTGCTTGGTACTAGGGTTTTTGAG 59.784 45.833 0.00 0.00 0.00 3.02
1962 2956 3.756963 GCTTGGTACTAGGGTTTTTGAGG 59.243 47.826 0.00 0.00 0.00 3.86
1965 2959 2.914941 GGTACTAGGGTTTTTGAGGGGA 59.085 50.000 0.00 0.00 0.00 4.81
1966 2960 3.526430 GGTACTAGGGTTTTTGAGGGGAT 59.474 47.826 0.00 0.00 0.00 3.85
1967 2961 4.017775 GGTACTAGGGTTTTTGAGGGGATT 60.018 45.833 0.00 0.00 0.00 3.01
1969 2963 3.660669 ACTAGGGTTTTTGAGGGGATTGA 59.339 43.478 0.00 0.00 0.00 2.57
1970 2964 3.852858 AGGGTTTTTGAGGGGATTGAT 57.147 42.857 0.00 0.00 0.00 2.57
1971 2965 3.444029 AGGGTTTTTGAGGGGATTGATG 58.556 45.455 0.00 0.00 0.00 3.07
1972 2966 2.501316 GGGTTTTTGAGGGGATTGATGG 59.499 50.000 0.00 0.00 0.00 3.51
1973 2967 2.501316 GGTTTTTGAGGGGATTGATGGG 59.499 50.000 0.00 0.00 0.00 4.00
1974 2968 2.501316 GTTTTTGAGGGGATTGATGGGG 59.499 50.000 0.00 0.00 0.00 4.96
1976 2970 0.254059 TTGAGGGGATTGATGGGGGA 60.254 55.000 0.00 0.00 0.00 4.81
1977 2971 0.027696 TGAGGGGATTGATGGGGGAT 60.028 55.000 0.00 0.00 0.00 3.85
1978 2972 1.228078 TGAGGGGATTGATGGGGGATA 59.772 52.381 0.00 0.00 0.00 2.59
1980 2974 2.929043 GAGGGGATTGATGGGGGATAAT 59.071 50.000 0.00 0.00 0.00 1.28
1982 2976 2.023984 GGGGATTGATGGGGGATAATCC 60.024 54.545 0.00 0.00 44.93 3.01
1987 2981 3.073411 TGATGGGGGATAATCCTCACA 57.927 47.619 0.00 0.00 39.37 3.58
1988 2982 2.981784 TGATGGGGGATAATCCTCACAG 59.018 50.000 0.00 0.00 39.37 3.66
1989 2983 2.887454 TGGGGGATAATCCTCACAGA 57.113 50.000 0.00 0.00 39.37 3.41
1990 2984 2.694397 TGGGGGATAATCCTCACAGAG 58.306 52.381 0.00 0.00 39.37 3.35
1992 2986 3.116199 TGGGGGATAATCCTCACAGAGAT 60.116 47.826 0.00 0.00 39.37 2.75
1994 2988 5.094387 GGGGGATAATCCTCACAGAGATTA 58.906 45.833 0.00 0.00 39.37 1.75
1997 2991 5.782845 GGGATAATCCTCACAGAGATTAGGT 59.217 44.000 0.00 0.00 36.57 3.08
1998 2992 6.295575 GGGATAATCCTCACAGAGATTAGGTG 60.296 46.154 0.00 0.00 36.57 4.00
1999 2993 6.495181 GGATAATCCTCACAGAGATTAGGTGA 59.505 42.308 0.00 0.00 39.09 4.02
2000 2994 7.015682 GGATAATCCTCACAGAGATTAGGTGAA 59.984 40.741 0.00 0.00 40.67 3.18
2001 2995 6.627087 AATCCTCACAGAGATTAGGTGAAA 57.373 37.500 0.00 0.00 40.67 2.69
2002 2996 5.407407 TCCTCACAGAGATTAGGTGAAAC 57.593 43.478 0.00 0.00 40.67 2.78
2004 2998 5.186021 TCCTCACAGAGATTAGGTGAAACTC 59.814 44.000 0.00 0.00 40.67 3.01
2007 3001 5.306937 TCACAGAGATTAGGTGAAACTCCAA 59.693 40.000 0.00 0.00 37.61 3.53
2009 3003 4.938226 CAGAGATTAGGTGAAACTCCAACC 59.062 45.833 0.00 0.00 37.61 3.77
2012 3006 5.561679 AGATTAGGTGAAACTCCAACCTTC 58.438 41.667 0.00 0.00 36.74 3.46
2013 3007 4.781775 TTAGGTGAAACTCCAACCTTCA 57.218 40.909 0.00 0.00 36.74 3.02
2014 3008 2.932261 AGGTGAAACTCCAACCTTCAC 58.068 47.619 5.76 5.76 45.30 3.18
2016 3010 1.954382 GTGAAACTCCAACCTTCACCC 59.046 52.381 3.35 0.00 41.94 4.61
2017 3011 1.566703 TGAAACTCCAACCTTCACCCA 59.433 47.619 0.00 0.00 0.00 4.51
2018 3012 2.024846 TGAAACTCCAACCTTCACCCAA 60.025 45.455 0.00 0.00 0.00 4.12
2021 3015 1.075536 ACTCCAACCTTCACCCAATCC 59.924 52.381 0.00 0.00 0.00 3.01
2022 3016 1.355720 CTCCAACCTTCACCCAATCCT 59.644 52.381 0.00 0.00 0.00 3.24
2026 3020 4.140900 TCCAACCTTCACCCAATCCTTTTA 60.141 41.667 0.00 0.00 0.00 1.52
2027 3021 4.591072 CCAACCTTCACCCAATCCTTTTAA 59.409 41.667 0.00 0.00 0.00 1.52
2028 3022 5.071115 CCAACCTTCACCCAATCCTTTTAAA 59.929 40.000 0.00 0.00 0.00 1.52
2030 3024 6.605471 ACCTTCACCCAATCCTTTTAAATC 57.395 37.500 0.00 0.00 0.00 2.17
2031 3025 5.483937 ACCTTCACCCAATCCTTTTAAATCC 59.516 40.000 0.00 0.00 0.00 3.01
2032 3026 5.721480 CCTTCACCCAATCCTTTTAAATCCT 59.279 40.000 0.00 0.00 0.00 3.24
2033 3027 6.127338 CCTTCACCCAATCCTTTTAAATCCTC 60.127 42.308 0.00 0.00 0.00 3.71
2034 3028 5.898120 TCACCCAATCCTTTTAAATCCTCA 58.102 37.500 0.00 0.00 0.00 3.86
2035 3029 6.502138 TCACCCAATCCTTTTAAATCCTCAT 58.498 36.000 0.00 0.00 0.00 2.90
2037 3031 7.457535 TCACCCAATCCTTTTAAATCCTCATTT 59.542 33.333 0.00 0.00 36.18 2.32
2039 3033 9.506042 ACCCAATCCTTTTAAATCCTCATTTAT 57.494 29.630 0.00 0.00 34.95 1.40
2040 3034 9.987272 CCCAATCCTTTTAAATCCTCATTTATC 57.013 33.333 0.00 0.00 34.95 1.75
2054 3048 7.683578 TCCTCATTTATCATCAATCCACTAGG 58.316 38.462 0.00 0.00 0.00 3.02
2055 3049 7.293299 TCCTCATTTATCATCAATCCACTAGGT 59.707 37.037 0.00 0.00 35.89 3.08
2056 3050 8.597167 CCTCATTTATCATCAATCCACTAGGTA 58.403 37.037 0.00 0.00 35.89 3.08
2057 3051 9.650539 CTCATTTATCATCAATCCACTAGGTAG 57.349 37.037 0.00 0.00 35.89 3.18
2058 3052 8.597167 TCATTTATCATCAATCCACTAGGTAGG 58.403 37.037 0.00 0.00 35.89 3.18
2059 3053 6.935240 TTATCATCAATCCACTAGGTAGGG 57.065 41.667 0.00 0.00 35.89 3.53
2074 3649 5.691595 AGGTAGGGGTAGTGTATTGGATA 57.308 43.478 0.00 0.00 0.00 2.59
2075 3650 6.242591 AGGTAGGGGTAGTGTATTGGATAT 57.757 41.667 0.00 0.00 0.00 1.63
2076 3651 6.640925 AGGTAGGGGTAGTGTATTGGATATT 58.359 40.000 0.00 0.00 0.00 1.28
2077 3652 6.500751 AGGTAGGGGTAGTGTATTGGATATTG 59.499 42.308 0.00 0.00 0.00 1.90
2078 3653 6.499350 GGTAGGGGTAGTGTATTGGATATTGA 59.501 42.308 0.00 0.00 0.00 2.57
2079 3654 6.688073 AGGGGTAGTGTATTGGATATTGAG 57.312 41.667 0.00 0.00 0.00 3.02
2080 3655 6.390504 AGGGGTAGTGTATTGGATATTGAGA 58.609 40.000 0.00 0.00 0.00 3.27
2081 3656 6.849697 AGGGGTAGTGTATTGGATATTGAGAA 59.150 38.462 0.00 0.00 0.00 2.87
2082 3657 7.349859 AGGGGTAGTGTATTGGATATTGAGAAA 59.650 37.037 0.00 0.00 0.00 2.52
2083 3658 7.996644 GGGGTAGTGTATTGGATATTGAGAAAA 59.003 37.037 0.00 0.00 0.00 2.29
2084 3659 9.403583 GGGTAGTGTATTGGATATTGAGAAAAA 57.596 33.333 0.00 0.00 0.00 1.94
2088 3663 8.970020 AGTGTATTGGATATTGAGAAAAATGCA 58.030 29.630 0.00 0.00 0.00 3.96
2090 3665 8.970020 TGTATTGGATATTGAGAAAAATGCACT 58.030 29.630 0.00 0.00 0.00 4.40
2093 3668 8.806429 TTGGATATTGAGAAAAATGCACTAGA 57.194 30.769 0.00 0.00 0.00 2.43
2094 3669 8.442632 TGGATATTGAGAAAAATGCACTAGAG 57.557 34.615 0.00 0.00 0.00 2.43
2096 3671 8.897752 GGATATTGAGAAAAATGCACTAGAGTT 58.102 33.333 0.00 0.00 0.00 3.01
2099 3674 8.807667 ATTGAGAAAAATGCACTAGAGTTTTG 57.192 30.769 0.00 0.00 0.00 2.44
2100 3675 6.738114 TGAGAAAAATGCACTAGAGTTTTGG 58.262 36.000 0.00 0.00 0.00 3.28
2101 3676 6.089249 AGAAAAATGCACTAGAGTTTTGGG 57.911 37.500 0.00 0.00 0.00 4.12
2102 3677 5.833131 AGAAAAATGCACTAGAGTTTTGGGA 59.167 36.000 0.00 0.00 0.00 4.37
2103 3678 6.494835 AGAAAAATGCACTAGAGTTTTGGGAT 59.505 34.615 0.00 0.00 0.00 3.85
2104 3679 6.670695 AAAATGCACTAGAGTTTTGGGATT 57.329 33.333 0.00 0.00 0.00 3.01
2105 3680 6.670695 AAATGCACTAGAGTTTTGGGATTT 57.329 33.333 0.00 0.00 0.00 2.17
2106 3681 5.649782 ATGCACTAGAGTTTTGGGATTTG 57.350 39.130 0.00 0.00 0.00 2.32
2107 3682 4.469657 TGCACTAGAGTTTTGGGATTTGT 58.530 39.130 0.00 0.00 0.00 2.83
2108 3683 4.278170 TGCACTAGAGTTTTGGGATTTGTG 59.722 41.667 0.00 0.00 0.00 3.33
2109 3684 4.518970 GCACTAGAGTTTTGGGATTTGTGA 59.481 41.667 0.00 0.00 0.00 3.58
2110 3685 5.335191 GCACTAGAGTTTTGGGATTTGTGAG 60.335 44.000 0.00 0.00 0.00 3.51
2111 3686 5.182001 CACTAGAGTTTTGGGATTTGTGAGG 59.818 44.000 0.00 0.00 0.00 3.86
2112 3687 4.453480 AGAGTTTTGGGATTTGTGAGGA 57.547 40.909 0.00 0.00 0.00 3.71
2113 3688 4.803452 AGAGTTTTGGGATTTGTGAGGAA 58.197 39.130 0.00 0.00 0.00 3.36
2114 3689 5.208121 AGAGTTTTGGGATTTGTGAGGAAA 58.792 37.500 0.00 0.00 0.00 3.13
2116 3691 7.010160 AGAGTTTTGGGATTTGTGAGGAAATA 58.990 34.615 0.00 0.00 0.00 1.40
2117 3692 7.675619 AGAGTTTTGGGATTTGTGAGGAAATAT 59.324 33.333 0.00 0.00 0.00 1.28
2119 3694 7.454380 AGTTTTGGGATTTGTGAGGAAATATGA 59.546 33.333 0.00 0.00 0.00 2.15
2123 3698 6.126097 TGGGATTTGTGAGGAAATATGAGGAT 60.126 38.462 0.00 0.00 0.00 3.24
2124 3699 6.208204 GGGATTTGTGAGGAAATATGAGGATG 59.792 42.308 0.00 0.00 0.00 3.51
2125 3700 7.000472 GGATTTGTGAGGAAATATGAGGATGA 59.000 38.462 0.00 0.00 0.00 2.92
2127 3702 7.870509 TTTGTGAGGAAATATGAGGATGAAG 57.129 36.000 0.00 0.00 0.00 3.02
2128 3703 5.371526 TGTGAGGAAATATGAGGATGAAGC 58.628 41.667 0.00 0.00 0.00 3.86
2130 3705 6.002704 GTGAGGAAATATGAGGATGAAGCAT 58.997 40.000 0.00 0.00 0.00 3.79
2131 3706 6.002082 TGAGGAAATATGAGGATGAAGCATG 58.998 40.000 0.00 0.00 0.00 4.06
2133 3708 6.002704 AGGAAATATGAGGATGAAGCATGTC 58.997 40.000 0.00 0.00 0.00 3.06
2134 3709 5.766670 GGAAATATGAGGATGAAGCATGTCA 59.233 40.000 0.00 0.00 0.00 3.58
2135 3710 6.263842 GGAAATATGAGGATGAAGCATGTCAA 59.736 38.462 0.00 0.00 0.00 3.18
2136 3711 7.201848 GGAAATATGAGGATGAAGCATGTCAAA 60.202 37.037 0.00 0.00 0.00 2.69
2137 3712 7.834881 AATATGAGGATGAAGCATGTCAAAT 57.165 32.000 0.00 0.00 0.00 2.32
2139 3714 6.630444 ATGAGGATGAAGCATGTCAAATAC 57.370 37.500 0.00 0.00 0.00 1.89
2140 3715 5.499313 TGAGGATGAAGCATGTCAAATACA 58.501 37.500 0.00 0.00 43.86 2.29
2176 3751 5.449297 TGATGTTTTGAGATATGTGGGGA 57.551 39.130 0.00 0.00 0.00 4.81
2177 3752 6.017211 TGATGTTTTGAGATATGTGGGGAT 57.983 37.500 0.00 0.00 0.00 3.85
2178 3753 6.434302 TGATGTTTTGAGATATGTGGGGATT 58.566 36.000 0.00 0.00 0.00 3.01
2179 3754 6.896860 TGATGTTTTGAGATATGTGGGGATTT 59.103 34.615 0.00 0.00 0.00 2.17
2180 3755 6.528537 TGTTTTGAGATATGTGGGGATTTG 57.471 37.500 0.00 0.00 0.00 2.32
2181 3756 5.421693 TGTTTTGAGATATGTGGGGATTTGG 59.578 40.000 0.00 0.00 0.00 3.28
2182 3757 5.464588 TTTGAGATATGTGGGGATTTGGA 57.535 39.130 0.00 0.00 0.00 3.53
2183 3758 5.464588 TTGAGATATGTGGGGATTTGGAA 57.535 39.130 0.00 0.00 0.00 3.53
2185 3760 4.478317 TGAGATATGTGGGGATTTGGAAGT 59.522 41.667 0.00 0.00 0.00 3.01
2187 3762 5.842339 AGATATGTGGGGATTTGGAAGTTT 58.158 37.500 0.00 0.00 0.00 2.66
2188 3763 6.980577 AGATATGTGGGGATTTGGAAGTTTA 58.019 36.000 0.00 0.00 0.00 2.01
2190 3765 5.738619 ATGTGGGGATTTGGAAGTTTAAC 57.261 39.130 0.00 0.00 0.00 2.01
2192 3767 3.057104 GTGGGGATTTGGAAGTTTAACCG 60.057 47.826 0.00 0.00 0.00 4.44
2195 3770 3.423749 GGATTTGGAAGTTTAACCGGGA 58.576 45.455 6.32 0.00 0.00 5.14
2198 3773 5.653330 GGATTTGGAAGTTTAACCGGGATAA 59.347 40.000 6.32 1.54 0.00 1.75
2199 3774 6.322969 GGATTTGGAAGTTTAACCGGGATAAT 59.677 38.462 6.32 0.00 0.00 1.28
2200 3775 6.762702 TTTGGAAGTTTAACCGGGATAATC 57.237 37.500 6.32 4.40 0.00 1.75
2201 3776 4.784177 TGGAAGTTTAACCGGGATAATCC 58.216 43.478 6.32 9.52 35.23 3.01
2216 3791 5.711698 GGATAATCCCCACCAATTTCCTAA 58.288 41.667 0.00 0.00 0.00 2.69
2217 3792 6.140377 GGATAATCCCCACCAATTTCCTAAA 58.860 40.000 0.00 0.00 0.00 1.85
2219 3794 7.126573 GGATAATCCCCACCAATTTCCTAAAAA 59.873 37.037 0.00 0.00 0.00 1.94
2240 3815 6.829229 AAAACACTAGTACCAAATAAGGCC 57.171 37.500 0.00 0.00 0.00 5.19
2241 3816 5.774102 AACACTAGTACCAAATAAGGCCT 57.226 39.130 0.00 0.00 0.00 5.19
2243 3818 6.879367 ACACTAGTACCAAATAAGGCCTAA 57.121 37.500 5.16 0.00 0.00 2.69
2245 3820 6.126854 ACACTAGTACCAAATAAGGCCTAAGG 60.127 42.308 5.16 6.50 0.00 2.69
2256 3831 2.942641 GCCTAAGGCTTTGTTCGGT 58.057 52.632 4.45 0.00 46.69 4.69
2257 3832 1.244816 GCCTAAGGCTTTGTTCGGTT 58.755 50.000 4.45 0.00 46.69 4.44
2258 3833 1.611977 GCCTAAGGCTTTGTTCGGTTT 59.388 47.619 4.45 0.00 46.69 3.27
2259 3834 2.607038 GCCTAAGGCTTTGTTCGGTTTG 60.607 50.000 4.45 0.00 46.69 2.93
2260 3835 2.882137 CCTAAGGCTTTGTTCGGTTTGA 59.118 45.455 4.45 0.00 0.00 2.69
2262 3837 1.318576 AGGCTTTGTTCGGTTTGAGG 58.681 50.000 0.00 0.00 0.00 3.86
2264 3839 1.269051 GGCTTTGTTCGGTTTGAGGTG 60.269 52.381 0.00 0.00 0.00 4.00
2265 3840 1.269051 GCTTTGTTCGGTTTGAGGTGG 60.269 52.381 0.00 0.00 0.00 4.61
2266 3841 2.294074 CTTTGTTCGGTTTGAGGTGGA 58.706 47.619 0.00 0.00 0.00 4.02
2269 3844 2.938838 TGTTCGGTTTGAGGTGGATTT 58.061 42.857 0.00 0.00 0.00 2.17
2273 3848 3.146066 TCGGTTTGAGGTGGATTTGAAG 58.854 45.455 0.00 0.00 0.00 3.02
2276 3851 1.533625 TTGAGGTGGATTTGAAGCGG 58.466 50.000 0.00 0.00 0.00 5.52
2277 3852 0.690192 TGAGGTGGATTTGAAGCGGA 59.310 50.000 0.00 0.00 0.00 5.54
2278 3853 1.281867 TGAGGTGGATTTGAAGCGGAT 59.718 47.619 0.00 0.00 0.00 4.18
2279 3854 2.290896 TGAGGTGGATTTGAAGCGGATT 60.291 45.455 0.00 0.00 0.00 3.01
2280 3855 2.094675 AGGTGGATTTGAAGCGGATTG 58.905 47.619 0.00 0.00 0.00 2.67
2281 3856 2.091541 GGTGGATTTGAAGCGGATTGA 58.908 47.619 0.00 0.00 0.00 2.57
2283 3858 2.487762 GTGGATTTGAAGCGGATTGACA 59.512 45.455 0.00 0.00 0.00 3.58
2284 3859 3.057596 GTGGATTTGAAGCGGATTGACAA 60.058 43.478 0.00 0.00 0.00 3.18
2285 3860 3.191162 TGGATTTGAAGCGGATTGACAAG 59.809 43.478 0.00 0.00 0.00 3.16
2286 3861 3.428045 GGATTTGAAGCGGATTGACAAGG 60.428 47.826 0.00 0.00 0.00 3.61
2287 3862 2.559698 TTGAAGCGGATTGACAAGGA 57.440 45.000 0.00 0.00 0.00 3.36
2288 3863 2.787473 TGAAGCGGATTGACAAGGAT 57.213 45.000 0.00 0.00 0.00 3.24
2289 3864 3.071874 TGAAGCGGATTGACAAGGATT 57.928 42.857 0.00 0.00 0.00 3.01
2309 3884 6.392842 AGGATTGAGGTAGATTAAATTCCCCA 59.607 38.462 0.00 0.00 0.00 4.96
2311 3886 6.395780 TTGAGGTAGATTAAATTCCCCACA 57.604 37.500 0.00 0.00 0.00 4.17
2312 3887 5.751586 TGAGGTAGATTAAATTCCCCACAC 58.248 41.667 0.00 0.00 0.00 3.82
2313 3888 5.491078 TGAGGTAGATTAAATTCCCCACACT 59.509 40.000 0.00 0.00 0.00 3.55
2314 3889 6.002653 AGGTAGATTAAATTCCCCACACTC 57.997 41.667 0.00 0.00 0.00 3.51
2316 3891 5.104067 GGTAGATTAAATTCCCCACACTCCT 60.104 44.000 0.00 0.00 0.00 3.69
2317 3892 5.536497 AGATTAAATTCCCCACACTCCTT 57.464 39.130 0.00 0.00 0.00 3.36
2318 3893 5.903923 AGATTAAATTCCCCACACTCCTTT 58.096 37.500 0.00 0.00 0.00 3.11
2319 3894 5.952347 AGATTAAATTCCCCACACTCCTTTC 59.048 40.000 0.00 0.00 0.00 2.62
2320 3895 2.604912 AATTCCCCACACTCCTTTCC 57.395 50.000 0.00 0.00 0.00 3.13
2321 3896 1.455822 ATTCCCCACACTCCTTTCCA 58.544 50.000 0.00 0.00 0.00 3.53
2322 3897 1.227249 TTCCCCACACTCCTTTCCAA 58.773 50.000 0.00 0.00 0.00 3.53
2323 3898 1.455822 TCCCCACACTCCTTTCCAAT 58.544 50.000 0.00 0.00 0.00 3.16
2324 3899 1.354368 TCCCCACACTCCTTTCCAATC 59.646 52.381 0.00 0.00 0.00 2.67
2325 3900 1.616994 CCCCACACTCCTTTCCAATCC 60.617 57.143 0.00 0.00 0.00 3.01
2327 3902 1.616994 CCACACTCCTTTCCAATCCCC 60.617 57.143 0.00 0.00 0.00 4.81
2328 3903 1.355720 CACACTCCTTTCCAATCCCCT 59.644 52.381 0.00 0.00 0.00 4.79
2329 3904 2.073776 ACACTCCTTTCCAATCCCCTT 58.926 47.619 0.00 0.00 0.00 3.95
2330 3905 2.225117 ACACTCCTTTCCAATCCCCTTG 60.225 50.000 0.00 0.00 34.42 3.61
2347 3922 3.906720 CTTGGAAGGAGGATTAACCGA 57.093 47.619 0.00 0.00 44.74 4.69
2348 3923 4.216411 CTTGGAAGGAGGATTAACCGAA 57.784 45.455 0.00 0.00 44.74 4.30
2350 3925 2.907696 TGGAAGGAGGATTAACCGAACA 59.092 45.455 0.00 0.00 44.74 3.18
2351 3926 3.328343 TGGAAGGAGGATTAACCGAACAA 59.672 43.478 0.00 0.00 44.74 2.83
2355 3930 2.014857 GAGGATTAACCGAACAAGGCC 58.985 52.381 0.00 0.00 44.74 5.19
2356 3931 1.633945 AGGATTAACCGAACAAGGCCT 59.366 47.619 0.00 0.00 44.74 5.19
2357 3932 2.841881 AGGATTAACCGAACAAGGCCTA 59.158 45.455 5.16 0.00 44.74 3.93
2358 3933 3.264964 AGGATTAACCGAACAAGGCCTAA 59.735 43.478 5.16 0.00 44.74 2.69
2361 3936 2.579410 AACCGAACAAGGCCTAATGT 57.421 45.000 5.16 4.54 33.69 2.71
2362 3937 1.821216 ACCGAACAAGGCCTAATGTG 58.179 50.000 5.16 2.28 33.69 3.21
2363 3938 1.349688 ACCGAACAAGGCCTAATGTGA 59.650 47.619 5.16 0.00 33.69 3.58
2364 3939 2.224670 ACCGAACAAGGCCTAATGTGAA 60.225 45.455 5.16 0.00 33.69 3.18
2365 3940 3.016736 CCGAACAAGGCCTAATGTGAAT 58.983 45.455 5.16 0.00 0.00 2.57
2366 3941 3.443681 CCGAACAAGGCCTAATGTGAATT 59.556 43.478 5.16 0.00 0.00 2.17
2367 3942 4.414852 CGAACAAGGCCTAATGTGAATTG 58.585 43.478 5.16 0.00 0.00 2.32
2369 3944 2.497273 ACAAGGCCTAATGTGAATTGGC 59.503 45.455 5.16 0.00 42.56 4.52
2371 3946 1.064758 AGGCCTAATGTGAATTGGCGA 60.065 47.619 1.29 0.00 44.07 5.54
2372 3947 1.956477 GGCCTAATGTGAATTGGCGAT 59.044 47.619 0.00 0.00 44.07 4.58
2373 3948 2.287788 GGCCTAATGTGAATTGGCGATG 60.288 50.000 0.00 0.00 44.07 3.84
2374 3949 2.618241 GCCTAATGTGAATTGGCGATGA 59.382 45.455 0.00 0.00 33.96 2.92
2375 3950 3.548818 GCCTAATGTGAATTGGCGATGAC 60.549 47.826 0.00 0.00 33.96 3.06
2377 3952 1.016627 ATGTGAATTGGCGATGACCG 58.983 50.000 0.00 0.00 42.21 4.79
2379 3954 0.652592 GTGAATTGGCGATGACCGAG 59.347 55.000 0.00 0.00 41.76 4.63
2380 3955 0.534873 TGAATTGGCGATGACCGAGA 59.465 50.000 0.00 0.00 41.76 4.04
2381 3956 1.138859 TGAATTGGCGATGACCGAGAT 59.861 47.619 0.00 0.00 41.76 2.75
2387 4143 2.953648 TGGCGATGACCGAGATAAACTA 59.046 45.455 0.00 0.00 41.76 2.24
2394 4150 6.129431 CGATGACCGAGATAAACTATCAAACG 60.129 42.308 0.00 0.00 41.76 3.60
2413 4169 5.917541 AACGGTCAAAGTACATGTAACTG 57.082 39.130 7.25 9.31 0.00 3.16
2433 4189 3.407698 TGTTCGCCTATCTTCTTTGCAA 58.592 40.909 0.00 0.00 0.00 4.08
2490 4246 4.397417 CCCTTAGAAAAGACATCCAGCAAG 59.603 45.833 0.00 0.00 34.37 4.01
2517 4275 7.648039 TCCCTGTTGTTTTATTTGTTACTGT 57.352 32.000 0.00 0.00 0.00 3.55
2528 4286 4.686191 TTTGTTACTGTTCCCTCCGTTA 57.314 40.909 0.00 0.00 0.00 3.18
2542 4300 3.671928 CCTCCGTTAAAATATACGAGGCG 59.328 47.826 0.00 0.00 40.03 5.52
2549 4307 0.036388 AATATACGAGGCGCCATGGG 60.036 55.000 31.54 16.62 0.00 4.00
2606 4365 2.900046 CGAAAAACATAACCAGCGAACG 59.100 45.455 0.00 0.00 0.00 3.95
2623 4382 4.785417 CGAACGTCAGATATTAGACCCTC 58.215 47.826 0.00 1.07 0.00 4.30
2627 4386 5.446860 ACGTCAGATATTAGACCCTCTCAA 58.553 41.667 3.71 0.00 0.00 3.02
2640 4399 1.275291 CCTCTCAACAGACGCCCTTTA 59.725 52.381 0.00 0.00 0.00 1.85
2667 4426 2.480555 CACGAATCTTGGCACGGC 59.519 61.111 0.00 0.00 0.00 5.68
2675 4434 1.965930 CTTGGCACGGCTGTAGCAA 60.966 57.895 17.88 7.53 44.36 3.91
2714 4473 0.578211 CAACGTTCGTTGTAACCGCT 59.422 50.000 23.96 0.00 40.19 5.52
2716 4475 0.248990 ACGTTCGTTGTAACCGCTGA 60.249 50.000 0.00 0.00 0.00 4.26
2734 4493 1.087501 GAGCCCGTGAATGTTTCCTC 58.912 55.000 0.00 0.00 0.00 3.71
2772 4531 3.246112 CCCACCCTCACCCGTTGA 61.246 66.667 0.00 0.00 0.00 3.18
2785 4544 2.659610 GTTGAGGCTGCTCGACCT 59.340 61.111 0.00 0.00 39.65 3.85
2795 4554 2.657237 CTCGACCTTGCCGGAGTT 59.343 61.111 5.05 0.00 36.31 3.01
2806 4565 2.660064 CCGGAGTTGGGGGAGTCAG 61.660 68.421 0.00 0.00 0.00 3.51
2831 4590 3.058224 GTGTGTTGTGCTGGAATTAGGTC 60.058 47.826 0.00 0.00 0.00 3.85
2837 4596 6.719370 TGTTGTGCTGGAATTAGGTCTATTTT 59.281 34.615 0.00 0.00 0.00 1.82
2838 4597 6.757897 TGTGCTGGAATTAGGTCTATTTTG 57.242 37.500 0.00 0.00 0.00 2.44
2846 4605 0.033109 AGGTCTATTTTGGGCCAGCC 60.033 55.000 6.23 0.00 0.00 4.85
2847 4606 0.033109 GGTCTATTTTGGGCCAGCCT 60.033 55.000 6.23 0.00 36.10 4.58
2857 4616 3.753787 GGCCAGCCTAATAGCCATT 57.246 52.632 0.00 0.00 45.07 3.16
2868 4627 7.014038 CAGCCTAATAGCCATTTTCAGAATTCT 59.986 37.037 0.88 0.88 0.00 2.40
2909 4668 5.291971 CCATTTAGCCTATCCATGCAAAAC 58.708 41.667 0.00 0.00 0.00 2.43
2931 4690 6.954487 ACAAAAGGTGGGACTAAAGTTTAG 57.046 37.500 19.07 19.07 0.00 1.85
2942 4701 6.757478 GGGACTAAAGTTTAGTCTCATACTGC 59.243 42.308 36.81 24.64 42.92 4.40
2962 4721 3.301274 GCTCACCTAGTAGGAGTTGGAT 58.699 50.000 23.50 0.00 37.67 3.41
2975 4734 4.615588 GAGTTGGATCTCCTCATAAGGG 57.384 50.000 0.00 0.00 43.56 3.95
2998 4757 4.735369 AGGTTGTTTTCCCACATGTATGA 58.265 39.130 0.00 0.00 0.00 2.15
3005 4764 4.442401 TTCCCACATGTATGAGCATGAT 57.558 40.909 12.27 0.00 46.65 2.45
3007 4766 5.156608 TCCCACATGTATGAGCATGATAG 57.843 43.478 12.27 3.08 46.65 2.08
3022 4781 0.526524 GATAGCAAGAGAGCACGCGT 60.527 55.000 5.58 5.58 36.85 6.01
3084 4843 2.359354 TCACGGGTTGCGGAATGG 60.359 61.111 0.00 0.00 0.00 3.16
3109 4868 5.137403 CCGAGTCGTTGTCTAAATTTGTTG 58.863 41.667 12.31 0.00 0.00 3.33
3115 4874 7.493320 AGTCGTTGTCTAAATTTGTTGTAGTGA 59.507 33.333 0.00 0.00 0.00 3.41
3131 4890 6.864560 TGTAGTGAAGATTGAATACGAACG 57.135 37.500 0.00 0.00 0.00 3.95
3148 4907 4.453819 ACGAACGCTACACTCTTTAGTAGT 59.546 41.667 0.00 0.00 39.82 2.73
3161 4920 8.345565 CACTCTTTAGTAGTTGCTTGTTCATTT 58.654 33.333 0.00 0.00 33.48 2.32
3162 4921 8.560374 ACTCTTTAGTAGTTGCTTGTTCATTTC 58.440 33.333 0.00 0.00 32.84 2.17
3184 4943 3.244249 CGTCTCCCTCTTTTTCTTCACCT 60.244 47.826 0.00 0.00 0.00 4.00
3186 4945 3.328050 TCTCCCTCTTTTTCTTCACCTCC 59.672 47.826 0.00 0.00 0.00 4.30
3202 4961 3.057548 CCCGCTGCTGCATGTTCA 61.058 61.111 16.29 0.00 39.64 3.18
3204 4963 2.177531 CGCTGCTGCATGTTCACC 59.822 61.111 16.29 0.00 39.64 4.02
3213 4972 2.229784 CTGCATGTTCACCTCCTTTTCC 59.770 50.000 0.00 0.00 0.00 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.471676 GGAGTCCGGACAACAGCTATG 60.472 57.143 35.00 0.00 0.00 2.23
18 19 0.824759 GGAGTCCGGACAACAGCTAT 59.175 55.000 35.00 13.05 0.00 2.97
64 65 0.745128 ACCCGAGAAAAACGTGCACA 60.745 50.000 18.64 0.00 0.00 4.57
65 66 0.379316 AACCCGAGAAAAACGTGCAC 59.621 50.000 6.82 6.82 0.00 4.57
66 67 1.598601 GTAACCCGAGAAAAACGTGCA 59.401 47.619 0.00 0.00 0.00 4.57
85 86 2.793232 GTCTAGACGCACTTTTTCGTGT 59.207 45.455 7.22 0.00 39.22 4.49
126 127 0.906066 TTAGCCATCCAACGCAGGTA 59.094 50.000 0.00 0.00 0.00 3.08
130 131 0.878416 GTGTTTAGCCATCCAACGCA 59.122 50.000 0.00 0.00 32.31 5.24
165 166 4.521062 AGCGCATCCTCAGACCGC 62.521 66.667 11.47 0.00 42.96 5.68
176 192 1.180029 AAGGCATCTTCAAAGCGCAT 58.820 45.000 11.47 0.00 0.00 4.73
191 207 3.504520 TCCGGTCATTCAAAGTTAAAGGC 59.495 43.478 0.00 0.00 0.00 4.35
208 224 2.757894 ACACTGATCTAGGATCCGGT 57.242 50.000 5.98 0.00 0.00 5.28
213 229 4.469227 AGTCTGCAAACACTGATCTAGGAT 59.531 41.667 0.00 0.00 0.00 3.24
219 235 3.058639 GGACAAGTCTGCAAACACTGATC 60.059 47.826 0.00 0.00 0.00 2.92
238 254 3.604875 TTCGTCCATGGACTAAAGGAC 57.395 47.619 35.84 13.73 45.46 3.85
242 258 5.046878 ACACTGTATTCGTCCATGGACTAAA 60.047 40.000 35.84 29.33 42.54 1.85
244 260 4.021229 ACACTGTATTCGTCCATGGACTA 58.979 43.478 35.84 26.42 42.54 2.59
270 286 3.754965 TCTTCAACCCTGATCCACAAAG 58.245 45.455 0.00 0.00 0.00 2.77
275 291 1.064463 GGCATCTTCAACCCTGATCCA 60.064 52.381 0.00 0.00 0.00 3.41
283 299 2.644676 GAGGTTAGGGCATCTTCAACC 58.355 52.381 0.00 0.00 39.15 3.77
374 390 9.199982 GCAGACAGTAAAAATAGTGTACTACAA 57.800 33.333 0.00 0.00 34.06 2.41
376 392 7.540055 ACGCAGACAGTAAAAATAGTGTACTAC 59.460 37.037 0.00 0.00 34.06 2.73
377 393 7.596494 ACGCAGACAGTAAAAATAGTGTACTA 58.404 34.615 0.00 0.00 34.06 1.82
378 394 6.453092 ACGCAGACAGTAAAAATAGTGTACT 58.547 36.000 0.00 0.00 34.06 2.73
379 395 6.183360 GGACGCAGACAGTAAAAATAGTGTAC 60.183 42.308 0.00 0.00 34.06 2.90
392 408 4.876107 CCATTAATTAAGGACGCAGACAGT 59.124 41.667 11.32 0.00 0.00 3.55
393 409 4.876107 ACCATTAATTAAGGACGCAGACAG 59.124 41.667 11.32 0.00 0.00 3.51
394 410 4.839121 ACCATTAATTAAGGACGCAGACA 58.161 39.130 11.32 0.00 0.00 3.41
395 411 5.813080 AACCATTAATTAAGGACGCAGAC 57.187 39.130 11.32 0.00 0.00 3.51
396 412 5.064198 CGAAACCATTAATTAAGGACGCAGA 59.936 40.000 11.32 0.00 0.00 4.26
398 414 4.437659 GCGAAACCATTAATTAAGGACGCA 60.438 41.667 25.88 4.24 39.93 5.24
399 415 4.033019 GCGAAACCATTAATTAAGGACGC 58.967 43.478 22.26 22.26 36.58 5.19
400 416 4.095185 TGGCGAAACCATTAATTAAGGACG 59.905 41.667 11.32 14.94 46.36 4.79
415 434 2.803451 TGATTTGTGTGTTGGCGAAAC 58.197 42.857 0.00 0.00 39.41 2.78
473 492 7.038017 TGGACCTCTTTCTAGTTGATTGATCTT 60.038 37.037 0.00 0.00 0.00 2.40
531 1071 0.037975 GGTAAAACCGGAGACAGCGA 60.038 55.000 9.46 0.00 0.00 4.93
581 1121 4.944930 AGAGTAGTAGTACTGCAAGGTCAG 59.055 45.833 19.00 0.00 39.78 3.51
617 1160 2.435422 TGATCATGGTGCGAACAATGT 58.565 42.857 10.86 0.00 0.00 2.71
672 1215 2.562635 CTTGATGATGGAGGCTGAGTG 58.437 52.381 0.00 0.00 0.00 3.51
699 1621 0.375106 GGCACGAGCTTACTGCAATC 59.625 55.000 4.48 0.00 45.94 2.67
730 1652 1.927174 CGCTCCGAGTAATGAAGTTGG 59.073 52.381 0.00 0.00 33.65 3.77
734 1656 1.560923 CACCGCTCCGAGTAATGAAG 58.439 55.000 0.00 0.00 0.00 3.02
861 1803 2.283316 GGCGGGGGCAGGTAAAAA 60.283 61.111 0.00 0.00 0.00 1.94
862 1804 3.581338 TGGCGGGGGCAGGTAAAA 61.581 61.111 0.00 0.00 33.23 1.52
1001 1971 7.877003 TGGTTTCAGCGAATATTTTCTTTGTA 58.123 30.769 0.00 0.00 0.00 2.41
1003 1973 7.083858 TCTGGTTTCAGCGAATATTTTCTTTG 58.916 34.615 0.00 0.00 40.69 2.77
1004 1974 7.214467 TCTGGTTTCAGCGAATATTTTCTTT 57.786 32.000 0.00 0.00 40.69 2.52
1005 1975 6.623767 GCTCTGGTTTCAGCGAATATTTTCTT 60.624 38.462 0.00 0.00 40.69 2.52
1006 1976 5.163713 GCTCTGGTTTCAGCGAATATTTTCT 60.164 40.000 0.00 0.00 40.69 2.52
1007 1977 5.030936 GCTCTGGTTTCAGCGAATATTTTC 58.969 41.667 0.00 0.00 40.69 2.29
1008 1978 4.702131 AGCTCTGGTTTCAGCGAATATTTT 59.298 37.500 0.00 0.00 40.84 1.82
1019 1989 0.756294 TCGTGGAAGCTCTGGTTTCA 59.244 50.000 0.00 0.00 34.93 2.69
1250 2232 0.038892 TTGACGCGGGACTGACTAAC 60.039 55.000 12.47 0.00 0.00 2.34
1263 2245 5.607119 TTAGGAAACTGAGAAATTGACGC 57.393 39.130 0.00 0.00 43.88 5.19
1283 2265 5.236911 AGCGAGTTTCAACGGTTGTTAATTA 59.763 36.000 19.47 0.00 36.28 1.40
1284 2266 4.035909 AGCGAGTTTCAACGGTTGTTAATT 59.964 37.500 19.47 11.96 36.28 1.40
1285 2267 3.562557 AGCGAGTTTCAACGGTTGTTAAT 59.437 39.130 19.47 8.81 36.28 1.40
1286 2268 2.937799 AGCGAGTTTCAACGGTTGTTAA 59.062 40.909 19.47 12.49 36.28 2.01
1287 2269 2.540931 GAGCGAGTTTCAACGGTTGTTA 59.459 45.455 19.47 7.43 40.19 2.41
1288 2270 1.329599 GAGCGAGTTTCAACGGTTGTT 59.670 47.619 19.47 5.41 40.19 2.83
1289 2271 0.935196 GAGCGAGTTTCAACGGTTGT 59.065 50.000 19.47 1.05 40.19 3.32
1371 2353 3.561217 TTGAACCGCGCGTGCTCTA 62.561 57.895 29.95 15.14 39.65 2.43
1372 2354 4.961511 TTGAACCGCGCGTGCTCT 62.962 61.111 29.95 7.59 39.65 4.09
1562 2547 3.969802 AAACGCAGCAGCAGCACC 61.970 61.111 10.77 0.00 45.49 5.01
1720 2705 1.475403 GGAGATTGACGTCCCTGAGA 58.525 55.000 14.12 0.00 0.00 3.27
1837 2830 0.827368 GTGGCCCAAGAGTAGAGGAG 59.173 60.000 0.00 0.00 0.00 3.69
1894 2888 4.102524 ACTGACATGTGGTCCAAGTTCTAA 59.897 41.667 1.15 0.00 46.38 2.10
1921 2915 1.834188 CACGGCCTTACTGGGAATTT 58.166 50.000 0.00 0.00 36.00 1.82
1923 2917 1.077716 GCACGGCCTTACTGGGAAT 60.078 57.895 0.00 0.00 36.00 3.01
1926 2920 2.040544 CAAGCACGGCCTTACTGGG 61.041 63.158 0.00 0.00 36.00 4.45
1929 2923 0.036671 GTACCAAGCACGGCCTTACT 60.037 55.000 0.00 0.00 0.00 2.24
1930 2924 0.036671 AGTACCAAGCACGGCCTTAC 60.037 55.000 0.00 0.00 0.00 2.34
1931 2925 1.479323 CTAGTACCAAGCACGGCCTTA 59.521 52.381 0.00 0.00 0.00 2.69
1932 2926 0.249398 CTAGTACCAAGCACGGCCTT 59.751 55.000 0.00 0.00 0.00 4.35
1936 2930 0.611714 AACCCTAGTACCAAGCACGG 59.388 55.000 0.00 0.00 0.00 4.94
1938 2932 4.139038 TCAAAAACCCTAGTACCAAGCAC 58.861 43.478 0.00 0.00 0.00 4.40
1939 2933 4.394729 CTCAAAAACCCTAGTACCAAGCA 58.605 43.478 0.00 0.00 0.00 3.91
1940 2934 3.756963 CCTCAAAAACCCTAGTACCAAGC 59.243 47.826 0.00 0.00 0.00 4.01
1942 2936 3.074836 CCCCTCAAAAACCCTAGTACCAA 59.925 47.826 0.00 0.00 0.00 3.67
1943 2937 2.645797 CCCCTCAAAAACCCTAGTACCA 59.354 50.000 0.00 0.00 0.00 3.25
1945 2939 4.857130 ATCCCCTCAAAAACCCTAGTAC 57.143 45.455 0.00 0.00 0.00 2.73
1946 2940 4.853276 TCAATCCCCTCAAAAACCCTAGTA 59.147 41.667 0.00 0.00 0.00 1.82
1947 2941 3.660669 TCAATCCCCTCAAAAACCCTAGT 59.339 43.478 0.00 0.00 0.00 2.57
1948 2942 4.316025 TCAATCCCCTCAAAAACCCTAG 57.684 45.455 0.00 0.00 0.00 3.02
1949 2943 4.571792 CCATCAATCCCCTCAAAAACCCTA 60.572 45.833 0.00 0.00 0.00 3.53
1950 2944 3.444029 CATCAATCCCCTCAAAAACCCT 58.556 45.455 0.00 0.00 0.00 4.34
1953 2947 2.501316 CCCCATCAATCCCCTCAAAAAC 59.499 50.000 0.00 0.00 0.00 2.43
1954 2948 2.561755 CCCCCATCAATCCCCTCAAAAA 60.562 50.000 0.00 0.00 0.00 1.94
1955 2949 1.008206 CCCCCATCAATCCCCTCAAAA 59.992 52.381 0.00 0.00 0.00 2.44
1956 2950 0.636101 CCCCCATCAATCCCCTCAAA 59.364 55.000 0.00 0.00 0.00 2.69
1957 2951 0.254059 TCCCCCATCAATCCCCTCAA 60.254 55.000 0.00 0.00 0.00 3.02
1958 2952 0.027696 ATCCCCCATCAATCCCCTCA 60.028 55.000 0.00 0.00 0.00 3.86
1959 2953 2.059756 TATCCCCCATCAATCCCCTC 57.940 55.000 0.00 0.00 0.00 4.30
1960 2954 2.549694 TTATCCCCCATCAATCCCCT 57.450 50.000 0.00 0.00 0.00 4.79
1961 2955 2.023984 GGATTATCCCCCATCAATCCCC 60.024 54.545 0.00 0.00 40.29 4.81
1962 2956 2.929043 AGGATTATCCCCCATCAATCCC 59.071 50.000 7.76 0.00 45.01 3.85
1965 2959 3.989558 TGTGAGGATTATCCCCCATCAAT 59.010 43.478 7.76 0.00 37.19 2.57
1966 2960 3.395607 CTGTGAGGATTATCCCCCATCAA 59.604 47.826 7.76 0.00 37.19 2.57
1967 2961 2.981784 CTGTGAGGATTATCCCCCATCA 59.018 50.000 7.76 2.21 37.19 3.07
1969 2963 3.116199 TCTCTGTGAGGATTATCCCCCAT 60.116 47.826 7.76 0.00 37.19 4.00
1970 2964 2.250008 TCTCTGTGAGGATTATCCCCCA 59.750 50.000 7.76 3.78 37.19 4.96
1971 2965 2.977808 TCTCTGTGAGGATTATCCCCC 58.022 52.381 7.76 1.00 37.19 5.40
1972 2966 5.188751 CCTAATCTCTGTGAGGATTATCCCC 59.811 48.000 7.76 0.00 37.19 4.81
1973 2967 5.782845 ACCTAATCTCTGTGAGGATTATCCC 59.217 44.000 7.76 0.29 37.19 3.85
1974 2968 6.495181 TCACCTAATCTCTGTGAGGATTATCC 59.505 42.308 2.40 2.40 34.99 2.59
1976 2970 7.921041 TTCACCTAATCTCTGTGAGGATTAT 57.079 36.000 0.00 0.00 39.89 1.28
1977 2971 7.400339 AGTTTCACCTAATCTCTGTGAGGATTA 59.600 37.037 0.00 0.00 39.89 1.75
1978 2972 6.214412 AGTTTCACCTAATCTCTGTGAGGATT 59.786 38.462 0.00 0.00 39.89 3.01
1980 2974 5.087323 AGTTTCACCTAATCTCTGTGAGGA 58.913 41.667 0.00 0.00 39.89 3.71
1982 2976 5.047021 TGGAGTTTCACCTAATCTCTGTGAG 60.047 44.000 0.00 0.00 39.89 3.51
1987 2981 4.846940 AGGTTGGAGTTTCACCTAATCTCT 59.153 41.667 0.00 0.00 35.22 3.10
1988 2982 5.167303 AGGTTGGAGTTTCACCTAATCTC 57.833 43.478 0.00 0.00 34.44 2.75
1989 2983 5.073144 TGAAGGTTGGAGTTTCACCTAATCT 59.927 40.000 0.00 0.00 0.00 2.40
1990 2984 5.181433 GTGAAGGTTGGAGTTTCACCTAATC 59.819 44.000 5.51 0.00 42.91 1.75
1992 2986 4.457466 GTGAAGGTTGGAGTTTCACCTAA 58.543 43.478 5.51 0.00 42.91 2.69
1994 2988 2.932261 GTGAAGGTTGGAGTTTCACCT 58.068 47.619 5.51 0.00 42.91 4.00
1997 2991 1.566703 TGGGTGAAGGTTGGAGTTTCA 59.433 47.619 0.00 0.00 0.00 2.69
1998 2992 2.358322 TGGGTGAAGGTTGGAGTTTC 57.642 50.000 0.00 0.00 0.00 2.78
1999 2993 2.838637 TTGGGTGAAGGTTGGAGTTT 57.161 45.000 0.00 0.00 0.00 2.66
2000 2994 2.490902 GGATTGGGTGAAGGTTGGAGTT 60.491 50.000 0.00 0.00 0.00 3.01
2001 2995 1.075536 GGATTGGGTGAAGGTTGGAGT 59.924 52.381 0.00 0.00 0.00 3.85
2002 2996 1.355720 AGGATTGGGTGAAGGTTGGAG 59.644 52.381 0.00 0.00 0.00 3.86
2004 2998 2.309136 AAGGATTGGGTGAAGGTTGG 57.691 50.000 0.00 0.00 0.00 3.77
2007 3001 5.483937 GGATTTAAAAGGATTGGGTGAAGGT 59.516 40.000 0.00 0.00 0.00 3.50
2009 3003 6.437162 TGAGGATTTAAAAGGATTGGGTGAAG 59.563 38.462 0.00 0.00 0.00 3.02
2012 3006 6.796785 ATGAGGATTTAAAAGGATTGGGTG 57.203 37.500 0.00 0.00 0.00 4.61
2013 3007 7.813087 AAATGAGGATTTAAAAGGATTGGGT 57.187 32.000 0.00 0.00 29.49 4.51
2014 3008 9.987272 GATAAATGAGGATTTAAAAGGATTGGG 57.013 33.333 0.00 0.00 37.53 4.12
2027 3021 9.736414 CTAGTGGATTGATGATAAATGAGGATT 57.264 33.333 0.00 0.00 0.00 3.01
2028 3022 8.327271 CCTAGTGGATTGATGATAAATGAGGAT 58.673 37.037 0.00 0.00 34.57 3.24
2030 3024 7.456725 ACCTAGTGGATTGATGATAAATGAGG 58.543 38.462 0.00 0.00 37.04 3.86
2031 3025 9.650539 CTACCTAGTGGATTGATGATAAATGAG 57.349 37.037 0.00 0.00 37.04 2.90
2032 3026 8.597167 CCTACCTAGTGGATTGATGATAAATGA 58.403 37.037 0.00 0.00 37.04 2.57
2033 3027 7.826252 CCCTACCTAGTGGATTGATGATAAATG 59.174 40.741 0.00 0.00 37.04 2.32
2034 3028 7.037297 CCCCTACCTAGTGGATTGATGATAAAT 60.037 40.741 0.00 0.00 37.04 1.40
2035 3029 6.272324 CCCCTACCTAGTGGATTGATGATAAA 59.728 42.308 0.00 0.00 37.04 1.40
2037 3031 5.162760 ACCCCTACCTAGTGGATTGATGATA 60.163 44.000 0.00 0.00 37.04 2.15
2039 3033 3.051341 ACCCCTACCTAGTGGATTGATGA 60.051 47.826 0.00 0.00 37.04 2.92
2040 3034 3.318313 ACCCCTACCTAGTGGATTGATG 58.682 50.000 0.00 0.00 37.04 3.07
2041 3035 3.726837 ACCCCTACCTAGTGGATTGAT 57.273 47.619 0.00 0.00 37.04 2.57
2042 3036 3.534747 ACTACCCCTACCTAGTGGATTGA 59.465 47.826 0.00 0.00 37.04 2.57
2047 3041 2.842645 ACACTACCCCTACCTAGTGG 57.157 55.000 9.11 0.00 42.85 4.00
2049 3043 4.483520 TCCAATACACTACCCCTACCTAGT 59.516 45.833 0.00 0.00 0.00 2.57
2052 3046 4.571366 ATCCAATACACTACCCCTACCT 57.429 45.455 0.00 0.00 0.00 3.08
2054 3048 7.453752 TCTCAATATCCAATACACTACCCCTAC 59.546 40.741 0.00 0.00 0.00 3.18
2055 3049 7.541074 TCTCAATATCCAATACACTACCCCTA 58.459 38.462 0.00 0.00 0.00 3.53
2056 3050 6.390504 TCTCAATATCCAATACACTACCCCT 58.609 40.000 0.00 0.00 0.00 4.79
2057 3051 6.681729 TCTCAATATCCAATACACTACCCC 57.318 41.667 0.00 0.00 0.00 4.95
2058 3052 8.974060 TTTTCTCAATATCCAATACACTACCC 57.026 34.615 0.00 0.00 0.00 3.69
2062 3056 8.970020 TGCATTTTTCTCAATATCCAATACACT 58.030 29.630 0.00 0.00 0.00 3.55
2063 3057 9.023967 GTGCATTTTTCTCAATATCCAATACAC 57.976 33.333 0.00 0.00 0.00 2.90
2074 3649 7.869429 CCAAAACTCTAGTGCATTTTTCTCAAT 59.131 33.333 0.00 0.00 0.00 2.57
2075 3650 7.202526 CCAAAACTCTAGTGCATTTTTCTCAA 58.797 34.615 0.00 0.00 0.00 3.02
2076 3651 6.239008 CCCAAAACTCTAGTGCATTTTTCTCA 60.239 38.462 0.00 0.00 0.00 3.27
2077 3652 6.016276 TCCCAAAACTCTAGTGCATTTTTCTC 60.016 38.462 0.00 0.00 0.00 2.87
2078 3653 5.833131 TCCCAAAACTCTAGTGCATTTTTCT 59.167 36.000 0.00 0.00 0.00 2.52
2079 3654 6.084326 TCCCAAAACTCTAGTGCATTTTTC 57.916 37.500 0.00 0.00 0.00 2.29
2080 3655 6.670695 ATCCCAAAACTCTAGTGCATTTTT 57.329 33.333 0.00 0.00 0.00 1.94
2081 3656 6.670695 AATCCCAAAACTCTAGTGCATTTT 57.329 33.333 0.00 0.00 0.00 1.82
2082 3657 6.041979 ACAAATCCCAAAACTCTAGTGCATTT 59.958 34.615 0.00 0.00 0.00 2.32
2083 3658 5.539955 ACAAATCCCAAAACTCTAGTGCATT 59.460 36.000 0.00 0.00 0.00 3.56
2084 3659 5.047802 CACAAATCCCAAAACTCTAGTGCAT 60.048 40.000 0.00 0.00 0.00 3.96
2085 3660 4.278170 CACAAATCCCAAAACTCTAGTGCA 59.722 41.667 0.00 0.00 0.00 4.57
2086 3661 4.518970 TCACAAATCCCAAAACTCTAGTGC 59.481 41.667 0.00 0.00 0.00 4.40
2087 3662 5.182001 CCTCACAAATCCCAAAACTCTAGTG 59.818 44.000 0.00 0.00 0.00 2.74
2088 3663 5.073144 TCCTCACAAATCCCAAAACTCTAGT 59.927 40.000 0.00 0.00 0.00 2.57
2090 3665 5.576563 TCCTCACAAATCCCAAAACTCTA 57.423 39.130 0.00 0.00 0.00 2.43
2091 3666 4.453480 TCCTCACAAATCCCAAAACTCT 57.547 40.909 0.00 0.00 0.00 3.24
2092 3667 5.529581 TTTCCTCACAAATCCCAAAACTC 57.470 39.130 0.00 0.00 0.00 3.01
2093 3668 7.454380 TCATATTTCCTCACAAATCCCAAAACT 59.546 33.333 0.00 0.00 0.00 2.66
2094 3669 7.610865 TCATATTTCCTCACAAATCCCAAAAC 58.389 34.615 0.00 0.00 0.00 2.43
2096 3671 6.380846 CCTCATATTTCCTCACAAATCCCAAA 59.619 38.462 0.00 0.00 0.00 3.28
2098 3673 5.193527 TCCTCATATTTCCTCACAAATCCCA 59.806 40.000 0.00 0.00 0.00 4.37
2099 3674 5.694995 TCCTCATATTTCCTCACAAATCCC 58.305 41.667 0.00 0.00 0.00 3.85
2100 3675 7.000472 TCATCCTCATATTTCCTCACAAATCC 59.000 38.462 0.00 0.00 0.00 3.01
2101 3676 8.455903 TTCATCCTCATATTTCCTCACAAATC 57.544 34.615 0.00 0.00 0.00 2.17
2102 3677 7.014038 GCTTCATCCTCATATTTCCTCACAAAT 59.986 37.037 0.00 0.00 0.00 2.32
2103 3678 6.319658 GCTTCATCCTCATATTTCCTCACAAA 59.680 38.462 0.00 0.00 0.00 2.83
2104 3679 5.824624 GCTTCATCCTCATATTTCCTCACAA 59.175 40.000 0.00 0.00 0.00 3.33
2105 3680 5.104402 TGCTTCATCCTCATATTTCCTCACA 60.104 40.000 0.00 0.00 0.00 3.58
2106 3681 5.371526 TGCTTCATCCTCATATTTCCTCAC 58.628 41.667 0.00 0.00 0.00 3.51
2107 3682 5.635278 TGCTTCATCCTCATATTTCCTCA 57.365 39.130 0.00 0.00 0.00 3.86
2108 3683 6.002704 ACATGCTTCATCCTCATATTTCCTC 58.997 40.000 0.00 0.00 0.00 3.71
2109 3684 5.950023 ACATGCTTCATCCTCATATTTCCT 58.050 37.500 0.00 0.00 0.00 3.36
2110 3685 5.766670 TGACATGCTTCATCCTCATATTTCC 59.233 40.000 0.00 0.00 0.00 3.13
2111 3686 6.872628 TGACATGCTTCATCCTCATATTTC 57.127 37.500 0.00 0.00 0.00 2.17
2112 3687 7.649533 TTTGACATGCTTCATCCTCATATTT 57.350 32.000 0.00 0.00 0.00 1.40
2113 3688 7.834881 ATTTGACATGCTTCATCCTCATATT 57.165 32.000 0.00 0.00 0.00 1.28
2114 3689 7.940688 TGTATTTGACATGCTTCATCCTCATAT 59.059 33.333 0.00 0.00 31.20 1.78
2116 3691 6.124340 TGTATTTGACATGCTTCATCCTCAT 58.876 36.000 0.00 0.00 31.20 2.90
2117 3692 5.499313 TGTATTTGACATGCTTCATCCTCA 58.501 37.500 0.00 0.00 31.20 3.86
2150 3725 7.399765 TCCCCACATATCTCAAAACATCATTTT 59.600 33.333 0.00 0.00 0.00 1.82
2151 3726 6.896860 TCCCCACATATCTCAAAACATCATTT 59.103 34.615 0.00 0.00 0.00 2.32
2152 3727 6.434302 TCCCCACATATCTCAAAACATCATT 58.566 36.000 0.00 0.00 0.00 2.57
2153 3728 6.017211 TCCCCACATATCTCAAAACATCAT 57.983 37.500 0.00 0.00 0.00 2.45
2154 3729 5.449297 TCCCCACATATCTCAAAACATCA 57.551 39.130 0.00 0.00 0.00 3.07
2155 3730 6.966534 AATCCCCACATATCTCAAAACATC 57.033 37.500 0.00 0.00 0.00 3.06
2157 3732 5.421693 CCAAATCCCCACATATCTCAAAACA 59.578 40.000 0.00 0.00 0.00 2.83
2158 3733 5.656416 TCCAAATCCCCACATATCTCAAAAC 59.344 40.000 0.00 0.00 0.00 2.43
2162 3737 4.478317 ACTTCCAAATCCCCACATATCTCA 59.522 41.667 0.00 0.00 0.00 3.27
2163 3738 5.053978 ACTTCCAAATCCCCACATATCTC 57.946 43.478 0.00 0.00 0.00 2.75
2164 3739 5.472301 AACTTCCAAATCCCCACATATCT 57.528 39.130 0.00 0.00 0.00 1.98
2166 3741 6.382859 GGTTAAACTTCCAAATCCCCACATAT 59.617 38.462 0.00 0.00 0.00 1.78
2167 3742 5.717654 GGTTAAACTTCCAAATCCCCACATA 59.282 40.000 0.00 0.00 0.00 2.29
2169 3744 3.898741 GGTTAAACTTCCAAATCCCCACA 59.101 43.478 0.00 0.00 0.00 4.17
2170 3745 3.057104 CGGTTAAACTTCCAAATCCCCAC 60.057 47.826 0.00 0.00 0.00 4.61
2171 3746 3.158676 CGGTTAAACTTCCAAATCCCCA 58.841 45.455 0.00 0.00 0.00 4.96
2172 3747 2.494471 CCGGTTAAACTTCCAAATCCCC 59.506 50.000 0.00 0.00 0.00 4.81
2173 3748 2.494471 CCCGGTTAAACTTCCAAATCCC 59.506 50.000 0.00 0.00 0.00 3.85
2176 3751 6.322969 GGATTATCCCGGTTAAACTTCCAAAT 59.677 38.462 0.00 0.00 0.00 2.32
2177 3752 5.653330 GGATTATCCCGGTTAAACTTCCAAA 59.347 40.000 0.00 0.00 0.00 3.28
2178 3753 5.195185 GGATTATCCCGGTTAAACTTCCAA 58.805 41.667 0.00 0.00 0.00 3.53
2179 3754 4.784177 GGATTATCCCGGTTAAACTTCCA 58.216 43.478 0.00 0.00 0.00 3.53
2216 3791 7.008332 AGGCCTTATTTGGTACTAGTGTTTTT 58.992 34.615 0.00 0.00 0.00 1.94
2217 3792 6.549242 AGGCCTTATTTGGTACTAGTGTTTT 58.451 36.000 0.00 0.00 0.00 2.43
2219 3794 5.774102 AGGCCTTATTTGGTACTAGTGTT 57.226 39.130 0.00 0.00 0.00 3.32
2221 3796 6.289064 CCTTAGGCCTTATTTGGTACTAGTG 58.711 44.000 12.58 0.00 0.00 2.74
2222 3797 5.163227 GCCTTAGGCCTTATTTGGTACTAGT 60.163 44.000 12.58 0.00 44.06 2.57
2223 3798 5.306394 GCCTTAGGCCTTATTTGGTACTAG 58.694 45.833 12.58 0.00 44.06 2.57
2224 3799 5.300411 GCCTTAGGCCTTATTTGGTACTA 57.700 43.478 12.58 0.00 44.06 1.82
2225 3800 4.166246 GCCTTAGGCCTTATTTGGTACT 57.834 45.455 12.58 0.00 44.06 2.73
2239 3814 2.882137 TCAAACCGAACAAAGCCTTAGG 59.118 45.455 0.00 0.00 0.00 2.69
2240 3815 3.058224 CCTCAAACCGAACAAAGCCTTAG 60.058 47.826 0.00 0.00 0.00 2.18
2241 3816 2.882137 CCTCAAACCGAACAAAGCCTTA 59.118 45.455 0.00 0.00 0.00 2.69
2243 3818 1.318576 CCTCAAACCGAACAAAGCCT 58.681 50.000 0.00 0.00 0.00 4.58
2245 3820 1.269051 CCACCTCAAACCGAACAAAGC 60.269 52.381 0.00 0.00 0.00 3.51
2246 3821 2.294074 TCCACCTCAAACCGAACAAAG 58.706 47.619 0.00 0.00 0.00 2.77
2247 3822 2.421751 TCCACCTCAAACCGAACAAA 57.578 45.000 0.00 0.00 0.00 2.83
2248 3823 2.649531 ATCCACCTCAAACCGAACAA 57.350 45.000 0.00 0.00 0.00 2.83
2249 3824 2.621055 CAAATCCACCTCAAACCGAACA 59.379 45.455 0.00 0.00 0.00 3.18
2250 3825 2.882137 TCAAATCCACCTCAAACCGAAC 59.118 45.455 0.00 0.00 0.00 3.95
2251 3826 3.216187 TCAAATCCACCTCAAACCGAA 57.784 42.857 0.00 0.00 0.00 4.30
2252 3827 2.940994 TCAAATCCACCTCAAACCGA 57.059 45.000 0.00 0.00 0.00 4.69
2253 3828 2.351738 GCTTCAAATCCACCTCAAACCG 60.352 50.000 0.00 0.00 0.00 4.44
2255 3830 2.351738 CCGCTTCAAATCCACCTCAAAC 60.352 50.000 0.00 0.00 0.00 2.93
2256 3831 1.885887 CCGCTTCAAATCCACCTCAAA 59.114 47.619 0.00 0.00 0.00 2.69
2257 3832 1.073125 TCCGCTTCAAATCCACCTCAA 59.927 47.619 0.00 0.00 0.00 3.02
2258 3833 0.690192 TCCGCTTCAAATCCACCTCA 59.310 50.000 0.00 0.00 0.00 3.86
2259 3834 2.044123 ATCCGCTTCAAATCCACCTC 57.956 50.000 0.00 0.00 0.00 3.85
2260 3835 2.094675 CAATCCGCTTCAAATCCACCT 58.905 47.619 0.00 0.00 0.00 4.00
2262 3837 2.487762 TGTCAATCCGCTTCAAATCCAC 59.512 45.455 0.00 0.00 0.00 4.02
2264 3839 3.428045 CCTTGTCAATCCGCTTCAAATCC 60.428 47.826 0.00 0.00 0.00 3.01
2265 3840 3.440173 TCCTTGTCAATCCGCTTCAAATC 59.560 43.478 0.00 0.00 0.00 2.17
2266 3841 3.420893 TCCTTGTCAATCCGCTTCAAAT 58.579 40.909 0.00 0.00 0.00 2.32
2269 3844 2.749076 CAATCCTTGTCAATCCGCTTCA 59.251 45.455 0.00 0.00 0.00 3.02
2273 3848 1.672881 CCTCAATCCTTGTCAATCCGC 59.327 52.381 0.00 0.00 0.00 5.54
2276 3851 8.964476 TTAATCTACCTCAATCCTTGTCAATC 57.036 34.615 0.00 0.00 0.00 2.67
2277 3852 9.927081 ATTTAATCTACCTCAATCCTTGTCAAT 57.073 29.630 0.00 0.00 0.00 2.57
2278 3853 9.753674 AATTTAATCTACCTCAATCCTTGTCAA 57.246 29.630 0.00 0.00 0.00 3.18
2279 3854 9.396022 GAATTTAATCTACCTCAATCCTTGTCA 57.604 33.333 0.00 0.00 0.00 3.58
2280 3855 8.841300 GGAATTTAATCTACCTCAATCCTTGTC 58.159 37.037 0.00 0.00 0.00 3.18
2281 3856 7.780271 GGGAATTTAATCTACCTCAATCCTTGT 59.220 37.037 0.00 0.00 0.00 3.16
2283 3858 7.091537 TGGGGAATTTAATCTACCTCAATCCTT 60.092 37.037 0.00 0.00 0.00 3.36
2284 3859 6.392842 TGGGGAATTTAATCTACCTCAATCCT 59.607 38.462 0.00 0.00 0.00 3.24
2285 3860 6.490381 GTGGGGAATTTAATCTACCTCAATCC 59.510 42.308 0.00 0.00 32.71 3.01
2286 3861 7.013369 GTGTGGGGAATTTAATCTACCTCAATC 59.987 40.741 0.00 0.00 32.71 2.67
2287 3862 6.833933 GTGTGGGGAATTTAATCTACCTCAAT 59.166 38.462 0.00 0.00 32.71 2.57
2288 3863 6.011981 AGTGTGGGGAATTTAATCTACCTCAA 60.012 38.462 0.00 0.00 32.71 3.02
2289 3864 5.491078 AGTGTGGGGAATTTAATCTACCTCA 59.509 40.000 0.00 0.00 0.00 3.86
2290 3865 6.002653 AGTGTGGGGAATTTAATCTACCTC 57.997 41.667 0.00 0.00 0.00 3.85
2292 3867 5.104067 AGGAGTGTGGGGAATTTAATCTACC 60.104 44.000 0.00 0.00 0.00 3.18
2293 3868 6.002653 AGGAGTGTGGGGAATTTAATCTAC 57.997 41.667 0.00 0.00 0.00 2.59
2297 3872 5.023452 GGAAAGGAGTGTGGGGAATTTAAT 58.977 41.667 0.00 0.00 0.00 1.40
2298 3873 4.140900 TGGAAAGGAGTGTGGGGAATTTAA 60.141 41.667 0.00 0.00 0.00 1.52
2299 3874 3.399644 TGGAAAGGAGTGTGGGGAATTTA 59.600 43.478 0.00 0.00 0.00 1.40
2300 3875 2.178984 TGGAAAGGAGTGTGGGGAATTT 59.821 45.455 0.00 0.00 0.00 1.82
2301 3876 1.786441 TGGAAAGGAGTGTGGGGAATT 59.214 47.619 0.00 0.00 0.00 2.17
2302 3877 1.455822 TGGAAAGGAGTGTGGGGAAT 58.544 50.000 0.00 0.00 0.00 3.01
2303 3878 1.227249 TTGGAAAGGAGTGTGGGGAA 58.773 50.000 0.00 0.00 0.00 3.97
2305 3880 1.616994 GGATTGGAAAGGAGTGTGGGG 60.617 57.143 0.00 0.00 0.00 4.96
2306 3881 1.616994 GGGATTGGAAAGGAGTGTGGG 60.617 57.143 0.00 0.00 0.00 4.61
2307 3882 1.616994 GGGGATTGGAAAGGAGTGTGG 60.617 57.143 0.00 0.00 0.00 4.17
2309 3884 1.760405 AGGGGATTGGAAAGGAGTGT 58.240 50.000 0.00 0.00 0.00 3.55
2311 3886 2.907458 CAAGGGGATTGGAAAGGAGT 57.093 50.000 0.00 0.00 35.08 3.85
2324 3899 2.091830 GGTTAATCCTCCTTCCAAGGGG 60.092 54.545 5.49 1.54 46.75 4.79
2325 3900 2.421529 CGGTTAATCCTCCTTCCAAGGG 60.422 54.545 5.49 0.00 46.47 3.95
2327 3902 3.906720 TCGGTTAATCCTCCTTCCAAG 57.093 47.619 0.00 0.00 0.00 3.61
2328 3903 3.328343 TGTTCGGTTAATCCTCCTTCCAA 59.672 43.478 0.00 0.00 0.00 3.53
2329 3904 2.907696 TGTTCGGTTAATCCTCCTTCCA 59.092 45.455 0.00 0.00 0.00 3.53
2330 3905 3.622166 TGTTCGGTTAATCCTCCTTCC 57.378 47.619 0.00 0.00 0.00 3.46
2331 3906 3.939592 CCTTGTTCGGTTAATCCTCCTTC 59.060 47.826 0.00 0.00 0.00 3.46
2332 3907 3.872630 GCCTTGTTCGGTTAATCCTCCTT 60.873 47.826 0.00 0.00 0.00 3.36
2333 3908 2.355818 GCCTTGTTCGGTTAATCCTCCT 60.356 50.000 0.00 0.00 0.00 3.69
2335 3910 2.014857 GGCCTTGTTCGGTTAATCCTC 58.985 52.381 0.00 0.00 0.00 3.71
2336 3911 1.633945 AGGCCTTGTTCGGTTAATCCT 59.366 47.619 0.00 0.00 0.00 3.24
2337 3912 2.124277 AGGCCTTGTTCGGTTAATCC 57.876 50.000 0.00 0.00 0.00 3.01
2338 3913 4.638865 ACATTAGGCCTTGTTCGGTTAATC 59.361 41.667 12.58 0.00 0.00 1.75
2340 3915 3.754323 CACATTAGGCCTTGTTCGGTTAA 59.246 43.478 12.58 0.00 0.00 2.01
2341 3916 3.008157 TCACATTAGGCCTTGTTCGGTTA 59.992 43.478 12.58 0.00 0.00 2.85
2342 3917 2.159382 CACATTAGGCCTTGTTCGGTT 58.841 47.619 12.58 0.00 0.00 4.44
2344 3919 2.107950 TCACATTAGGCCTTGTTCGG 57.892 50.000 12.58 0.00 0.00 4.30
2345 3920 4.414852 CAATTCACATTAGGCCTTGTTCG 58.585 43.478 12.58 0.00 0.00 3.95
2346 3921 4.747810 CCAATTCACATTAGGCCTTGTTC 58.252 43.478 12.58 0.00 0.00 3.18
2347 3922 3.055891 GCCAATTCACATTAGGCCTTGTT 60.056 43.478 12.58 0.00 39.42 2.83
2348 3923 2.497273 GCCAATTCACATTAGGCCTTGT 59.503 45.455 12.58 7.62 39.42 3.16
2350 3925 1.750778 CGCCAATTCACATTAGGCCTT 59.249 47.619 12.58 0.00 42.28 4.35
2351 3926 1.064758 TCGCCAATTCACATTAGGCCT 60.065 47.619 11.78 11.78 42.28 5.19
2355 3930 3.303329 CGGTCATCGCCAATTCACATTAG 60.303 47.826 0.00 0.00 0.00 1.73
2356 3931 2.611751 CGGTCATCGCCAATTCACATTA 59.388 45.455 0.00 0.00 0.00 1.90
2357 3932 1.401552 CGGTCATCGCCAATTCACATT 59.598 47.619 0.00 0.00 0.00 2.71
2358 3933 1.016627 CGGTCATCGCCAATTCACAT 58.983 50.000 0.00 0.00 0.00 3.21
2361 3936 0.534873 TCTCGGTCATCGCCAATTCA 59.465 50.000 0.00 0.00 39.05 2.57
2362 3937 1.871080 ATCTCGGTCATCGCCAATTC 58.129 50.000 0.00 0.00 39.05 2.17
2363 3938 3.469008 TTATCTCGGTCATCGCCAATT 57.531 42.857 0.00 0.00 39.05 2.32
2364 3939 3.131396 GTTTATCTCGGTCATCGCCAAT 58.869 45.455 0.00 0.00 39.05 3.16
2365 3940 2.167693 AGTTTATCTCGGTCATCGCCAA 59.832 45.455 0.00 0.00 39.05 4.52
2366 3941 1.754803 AGTTTATCTCGGTCATCGCCA 59.245 47.619 0.00 0.00 39.05 5.69
2367 3942 2.510768 AGTTTATCTCGGTCATCGCC 57.489 50.000 0.00 0.00 39.05 5.54
2369 3944 6.129431 CGTTTGATAGTTTATCTCGGTCATCG 60.129 42.308 0.00 0.00 36.17 3.84
2371 3946 5.983720 CCGTTTGATAGTTTATCTCGGTCAT 59.016 40.000 13.77 0.00 38.46 3.06
2372 3947 5.105635 ACCGTTTGATAGTTTATCTCGGTCA 60.106 40.000 17.96 0.00 44.82 4.02
2373 3948 5.346522 ACCGTTTGATAGTTTATCTCGGTC 58.653 41.667 17.96 0.00 44.82 4.79
2374 3949 5.334724 ACCGTTTGATAGTTTATCTCGGT 57.665 39.130 17.96 17.96 44.14 4.69
2375 3950 5.345702 TGACCGTTTGATAGTTTATCTCGG 58.654 41.667 17.18 17.18 43.09 4.63
2377 3952 8.252964 ACTTTGACCGTTTGATAGTTTATCTC 57.747 34.615 0.00 0.00 36.17 2.75
2379 3954 8.928733 TGTACTTTGACCGTTTGATAGTTTATC 58.071 33.333 0.00 0.00 35.74 1.75
2380 3955 8.836268 TGTACTTTGACCGTTTGATAGTTTAT 57.164 30.769 0.00 0.00 0.00 1.40
2381 3956 8.714179 CATGTACTTTGACCGTTTGATAGTTTA 58.286 33.333 0.00 0.00 0.00 2.01
2387 4143 6.708949 AGTTACATGTACTTTGACCGTTTGAT 59.291 34.615 4.68 0.00 0.00 2.57
2394 4150 5.614013 GCGAACAGTTACATGTACTTTGACC 60.614 44.000 4.68 2.18 31.70 4.02
2413 4169 4.142600 ACATTGCAAAGAAGATAGGCGAAC 60.143 41.667 8.96 0.00 0.00 3.95
2490 4246 7.116233 CAGTAACAAATAAAACAACAGGGATGC 59.884 37.037 0.00 0.00 0.00 3.91
2517 4275 5.739935 GCCTCGTATATTTTAACGGAGGGAA 60.740 44.000 6.34 0.00 39.52 3.97
2528 4286 2.151202 CCATGGCGCCTCGTATATTTT 58.849 47.619 29.70 0.00 0.00 1.82
2542 4300 1.344114 TGAAAGCTGAAAACCCATGGC 59.656 47.619 6.09 0.00 0.00 4.40
2606 4365 6.547880 TCTGTTGAGAGGGTCTAATATCTGAC 59.452 42.308 0.87 0.87 0.00 3.51
2623 4382 2.743636 TCTAAAGGGCGTCTGTTGAG 57.256 50.000 0.00 0.00 0.00 3.02
2627 4386 2.188817 AGGAATCTAAAGGGCGTCTGT 58.811 47.619 0.00 0.00 0.00 3.41
2697 4456 0.248990 TCAGCGGTTACAACGAACGT 60.249 50.000 0.00 0.00 0.00 3.99
2714 4473 0.400213 AGGAAACATTCACGGGCTCA 59.600 50.000 0.00 0.00 0.00 4.26
2716 4475 0.673644 CGAGGAAACATTCACGGGCT 60.674 55.000 0.00 0.00 0.00 5.19
2734 4493 4.372656 GGAGTGGATAAGGAGAAATGACG 58.627 47.826 0.00 0.00 0.00 4.35
2772 4531 4.400961 GGCAAGGTCGAGCAGCCT 62.401 66.667 31.35 13.96 42.01 4.58
2785 4544 3.646715 CTCCCCCAACTCCGGCAA 61.647 66.667 0.00 0.00 0.00 4.52
2795 4554 2.200370 ACACGACTGACTCCCCCA 59.800 61.111 0.00 0.00 0.00 4.96
2806 4565 0.944386 ATTCCAGCACAACACACGAC 59.056 50.000 0.00 0.00 0.00 4.34
2831 4590 3.507622 GCTATTAGGCTGGCCCAAAATAG 59.492 47.826 21.67 21.67 40.87 1.73
2837 4596 1.067762 ATGGCTATTAGGCTGGCCCA 61.068 55.000 17.14 3.77 41.80 5.36
2838 4597 0.113190 AATGGCTATTAGGCTGGCCC 59.887 55.000 17.14 0.00 41.80 5.80
2885 4644 3.159213 TGCATGGATAGGCTAAATGGG 57.841 47.619 0.00 0.00 34.05 4.00
2889 4648 5.991933 TTGTTTTGCATGGATAGGCTAAA 57.008 34.783 0.00 0.00 36.34 1.85
2893 4652 3.934579 CCTTTTGTTTTGCATGGATAGGC 59.065 43.478 0.00 0.00 0.00 3.93
2896 4655 4.262808 CCCACCTTTTGTTTTGCATGGATA 60.263 41.667 0.00 0.00 0.00 2.59
2897 4656 3.496515 CCCACCTTTTGTTTTGCATGGAT 60.497 43.478 0.00 0.00 0.00 3.41
2898 4657 2.158842 CCCACCTTTTGTTTTGCATGGA 60.159 45.455 0.00 0.00 0.00 3.41
2903 4662 2.979814 AGTCCCACCTTTTGTTTTGC 57.020 45.000 0.00 0.00 0.00 3.68
2909 4668 6.771267 AGACTAAACTTTAGTCCCACCTTTTG 59.229 38.462 27.43 0.00 43.61 2.44
2931 4690 4.517453 CCTACTAGGTGAGCAGTATGAGAC 59.483 50.000 0.00 0.00 39.69 3.36
2937 4696 4.270834 CAACTCCTACTAGGTGAGCAGTA 58.729 47.826 10.58 0.00 36.19 2.74
2942 4701 4.798882 AGATCCAACTCCTACTAGGTGAG 58.201 47.826 10.58 0.00 36.19 3.51
2975 4734 4.764823 TCATACATGTGGGAAAACAACCTC 59.235 41.667 9.11 0.00 32.81 3.85
2977 4736 4.618227 GCTCATACATGTGGGAAAACAACC 60.618 45.833 9.11 0.00 32.81 3.77
2998 4757 2.802415 CGTGCTCTCTTGCTATCATGCT 60.802 50.000 0.00 0.00 0.00 3.79
3005 4764 1.444383 CACGCGTGCTCTCTTGCTA 60.444 57.895 28.16 0.00 0.00 3.49
3056 4815 4.771356 CCCGTGACGCGTCGTGAT 62.771 66.667 31.88 0.00 41.37 3.06
3066 4825 2.686816 CCATTCCGCAACCCGTGAC 61.687 63.158 0.00 0.00 34.38 3.67
3081 4840 0.968901 TAGACAACGACTCGGCCCAT 60.969 55.000 0.00 0.00 0.00 4.00
3084 4843 2.005971 ATTTAGACAACGACTCGGCC 57.994 50.000 2.98 0.00 0.00 6.13
3089 4848 7.493320 TCACTACAACAAATTTAGACAACGACT 59.507 33.333 0.00 0.00 0.00 4.18
3091 4850 7.773864 TCACTACAACAAATTTAGACAACGA 57.226 32.000 0.00 0.00 0.00 3.85
3109 4868 5.515626 AGCGTTCGTATTCAATCTTCACTAC 59.484 40.000 0.00 0.00 0.00 2.73
3115 4874 5.408356 AGTGTAGCGTTCGTATTCAATCTT 58.592 37.500 0.00 0.00 0.00 2.40
3131 4890 5.927115 ACAAGCAACTACTAAAGAGTGTAGC 59.073 40.000 0.00 0.00 39.60 3.58
3148 4907 2.552315 GGGAGACGAAATGAACAAGCAA 59.448 45.455 0.00 0.00 0.00 3.91
3161 4920 3.244112 GGTGAAGAAAAAGAGGGAGACGA 60.244 47.826 0.00 0.00 0.00 4.20
3162 4921 3.067833 GGTGAAGAAAAAGAGGGAGACG 58.932 50.000 0.00 0.00 0.00 4.18
3184 4943 2.747460 GAACATGCAGCAGCGGGA 60.747 61.111 0.00 0.00 46.23 5.14
3186 4945 2.177531 GTGAACATGCAGCAGCGG 59.822 61.111 0.00 0.00 46.23 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.