Multiple sequence alignment - TraesCS1A01G227700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G227700 chr1A 100.000 4544 0 0 1 4544 398671637 398667094 0.000000e+00 8392.0
1 TraesCS1A01G227700 chr1A 100.000 1416 0 0 4886 6301 398666752 398665337 0.000000e+00 2615.0
2 TraesCS1A01G227700 chr1A 92.090 354 26 2 1 354 431943798 431943447 1.220000e-136 497.0
3 TraesCS1A01G227700 chr1A 75.600 250 43 14 2322 2567 343748346 343748111 2.400000e-19 108.0
4 TraesCS1A01G227700 chr1D 94.654 2862 99 29 498 3332 317595418 317592584 0.000000e+00 4388.0
5 TraesCS1A01G227700 chr1D 95.556 1170 28 7 3334 4482 317592547 317591381 0.000000e+00 1851.0
6 TraesCS1A01G227700 chr1D 91.059 973 53 10 4894 5843 317591014 317590053 0.000000e+00 1284.0
7 TraesCS1A01G227700 chr1D 92.394 355 24 3 1 354 250137032 250137384 2.620000e-138 503.0
8 TraesCS1A01G227700 chr1D 93.458 107 7 0 6195 6301 317560096 317559990 6.540000e-35 159.0
9 TraesCS1A01G227700 chr1B 93.063 2883 127 35 485 3332 429704493 429701649 0.000000e+00 4148.0
10 TraesCS1A01G227700 chr1B 91.538 1359 81 11 4886 6220 429700365 429699017 0.000000e+00 1842.0
11 TraesCS1A01G227700 chr1B 93.344 1232 53 7 3334 4544 429701612 429700389 0.000000e+00 1794.0
12 TraesCS1A01G227700 chr1B 88.333 120 11 2 345 461 429755549 429755430 2.370000e-29 141.0
13 TraesCS1A01G227700 chr1B 85.496 131 15 3 4999 5127 245953840 245953968 3.960000e-27 134.0
14 TraesCS1A01G227700 chr1B 75.600 250 43 14 2322 2567 633764458 633764223 2.400000e-19 108.0
15 TraesCS1A01G227700 chr1B 86.765 68 4 2 5569 5636 142035877 142035815 3.150000e-08 71.3
16 TraesCS1A01G227700 chr3A 93.895 344 21 0 1 344 561066371 561066028 2.600000e-143 520.0
17 TraesCS1A01G227700 chr6A 93.642 346 19 3 1 345 564972038 564971695 1.210000e-141 514.0
18 TraesCS1A01G227700 chr7D 93.333 345 22 1 1 345 428706775 428706432 5.640000e-140 508.0
19 TraesCS1A01G227700 chr7D 85.455 55 7 1 5586 5639 82298950 82299004 8.820000e-04 56.5
20 TraesCS1A01G227700 chr2B 92.816 348 24 1 1 347 784204908 784205255 2.620000e-138 503.0
21 TraesCS1A01G227700 chr2B 92.816 348 24 1 1 347 784215528 784215875 2.620000e-138 503.0
22 TraesCS1A01G227700 chr2B 83.099 142 23 1 5002 5142 508959635 508959494 1.840000e-25 128.0
23 TraesCS1A01G227700 chr2B 75.299 251 41 17 2323 2567 186934611 186934376 4.020000e-17 100.0
24 TraesCS1A01G227700 chr2B 81.250 112 12 2 6190 6301 374020820 374020922 1.460000e-11 82.4
25 TraesCS1A01G227700 chr7B 92.962 341 21 1 4 344 498873104 498872767 1.580000e-135 494.0
26 TraesCS1A01G227700 chr7B 100.000 35 0 0 365 399 24285711 24285677 1.470000e-06 65.8
27 TraesCS1A01G227700 chr7B 82.667 75 6 6 5567 5637 566603662 566603733 6.820000e-05 60.2
28 TraesCS1A01G227700 chr2D 92.486 346 24 2 2 346 64175761 64176105 1.580000e-135 494.0
29 TraesCS1A01G227700 chr2D 86.667 60 3 3 345 399 599139812 599139753 1.900000e-05 62.1
30 TraesCS1A01G227700 chr2D 96.875 32 0 1 369 399 608382316 608382285 1.100000e-02 52.8
31 TraesCS1A01G227700 chr6B 82.984 382 56 7 3687 4060 147683227 147683607 2.810000e-88 337.0
32 TraesCS1A01G227700 chr6B 85.232 237 35 0 3333 3569 147682819 147683055 1.750000e-60 244.0
33 TraesCS1A01G227700 chr5B 87.302 126 15 1 5003 5127 485912069 485912194 6.580000e-30 143.0
34 TraesCS1A01G227700 chr5B 79.235 183 31 6 5003 5183 250542357 250542180 3.090000e-23 121.0
35 TraesCS1A01G227700 chr4A 84.507 142 20 2 5002 5142 498698765 498698625 8.520000e-29 139.0
36 TraesCS1A01G227700 chr4A 75.806 248 46 10 2323 2567 428567630 428567866 5.160000e-21 113.0
37 TraesCS1A01G227700 chr4D 84.559 136 21 0 5007 5142 85007356 85007221 1.100000e-27 135.0
38 TraesCS1A01G227700 chr4D 86.154 65 5 1 5572 5636 144894933 144894993 4.080000e-07 67.6
39 TraesCS1A01G227700 chr4B 83.688 141 22 1 5002 5142 122218295 122218156 1.430000e-26 132.0
40 TraesCS1A01G227700 chr4B 87.097 62 1 3 345 399 489654999 489655060 5.270000e-06 63.9
41 TraesCS1A01G227700 chr5A 75.709 247 47 10 2323 2567 502661473 502661708 1.860000e-20 111.0
42 TraesCS1A01G227700 chr2A 75.709 247 47 9 2323 2567 433418389 433418624 1.860000e-20 111.0
43 TraesCS1A01G227700 chr2A 83.582 67 9 2 5572 5637 334909103 334909168 1.900000e-05 62.1
44 TraesCS1A01G227700 chrUn 75.600 250 43 14 2322 2567 417553268 417553033 2.400000e-19 108.0
45 TraesCS1A01G227700 chrUn 84.722 72 7 1 5565 5636 53798838 53798771 1.130000e-07 69.4
46 TraesCS1A01G227700 chr3B 97.368 38 0 1 367 403 767566202 767566239 5.270000e-06 63.9
47 TraesCS1A01G227700 chr7A 88.235 51 6 0 5586 5636 699250360 699250310 1.900000e-05 62.1
48 TraesCS1A01G227700 chr5D 100.000 33 0 0 367 399 548308418 548308450 1.900000e-05 62.1
49 TraesCS1A01G227700 chr3D 93.023 43 1 2 387 428 93190835 93190876 1.900000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G227700 chr1A 398665337 398671637 6300 True 5503.500000 8392 100.000000 1 6301 2 chr1A.!!$R3 6300
1 TraesCS1A01G227700 chr1D 317590053 317595418 5365 True 2507.666667 4388 93.756333 498 5843 3 chr1D.!!$R2 5345
2 TraesCS1A01G227700 chr1B 429699017 429704493 5476 True 2594.666667 4148 92.648333 485 6220 3 chr1B.!!$R4 5735
3 TraesCS1A01G227700 chr6B 147682819 147683607 788 False 290.500000 337 84.108000 3333 4060 2 chr6B.!!$F1 727


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
248 249 0.035056 CATTCAGGAGAAAGCGGGGT 60.035 55.0 0.00 0.00 37.29 4.95 F
424 425 0.038159 CGTGGGAAGGTGAGAGTGAC 60.038 60.0 0.00 0.00 0.00 3.67 F
844 867 0.043940 AGCTGTCCAATCTCCTCCCT 59.956 55.0 0.00 0.00 0.00 4.20 F
852 875 0.399806 AATCTCCTCCCTCTGGCCTC 60.400 60.0 3.32 0.00 0.00 4.70 F
1419 1453 0.742281 CCCAGTCCGTGAGCTGATTG 60.742 60.0 0.00 0.00 34.87 2.67 F
1518 1553 1.978542 CTGAAAGATGCAACAGCTGC 58.021 50.0 15.27 0.49 45.15 5.25 F
2960 3006 2.148916 TTGCTGACTACTTCCGTGTG 57.851 50.0 0.00 0.00 0.00 3.82 F
3805 3940 1.143373 TATCACCGACGCATGTTCGC 61.143 55.0 11.98 0.00 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2152 2197 0.321021 AGTCTCCAGTTCAGCTGCAG 59.679 55.000 10.11 10.11 43.71 4.41 R
2486 2531 7.346698 CAGATATATCCTGGGAGTATGGACAAT 59.653 40.741 9.18 0.00 32.16 2.71 R
2647 2692 4.457466 TCATAGCATCATGTGAATGCAGT 58.543 39.130 17.31 0.00 43.25 4.40 R
2916 2962 4.340666 TGCAGACCTTTGTTCATTGCTTAA 59.659 37.500 0.00 0.00 0.00 1.85 R
3430 3511 4.286707 TGGAGGATCGTCTATTTCCTTGA 58.713 43.478 14.65 0.00 39.98 3.02 R
3598 3698 6.016860 CACAACATCCTGATGAAAACTCAAGA 60.017 38.462 13.81 0.00 41.20 3.02 R
5031 5195 1.263356 TGACTCGGGACAAACCTAGG 58.737 55.000 7.41 7.41 38.98 3.02 R
5417 5587 0.160182 GAACAGTTACACGTTCGCCG 59.840 55.000 2.75 0.00 44.03 6.46 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 7.724305 ACGATTAGTTTCTTTAGTTTGAGCA 57.276 32.000 0.00 0.00 0.00 4.26
46 47 8.149973 ACGATTAGTTTCTTTAGTTTGAGCAA 57.850 30.769 0.00 0.00 0.00 3.91
47 48 8.068380 ACGATTAGTTTCTTTAGTTTGAGCAAC 58.932 33.333 0.00 0.00 35.32 4.17
48 49 8.067784 CGATTAGTTTCTTTAGTTTGAGCAACA 58.932 33.333 0.00 0.00 37.93 3.33
49 50 9.730420 GATTAGTTTCTTTAGTTTGAGCAACAA 57.270 29.630 0.00 0.00 37.93 2.83
60 61 5.975693 TTTGAGCAACAAATACCTAAGGG 57.024 39.130 5.25 0.00 42.57 3.95
61 62 4.993028 TTGAGCAACAAATACCTAAGGGT 58.007 39.130 0.00 0.00 41.29 4.34
62 63 4.331968 TGAGCAACAAATACCTAAGGGTG 58.668 43.478 0.00 0.00 46.75 4.61
63 64 3.694566 GAGCAACAAATACCTAAGGGTGG 59.305 47.826 0.00 0.00 46.75 4.61
64 65 2.758423 GCAACAAATACCTAAGGGTGGG 59.242 50.000 0.00 0.00 46.75 4.61
65 66 3.361786 CAACAAATACCTAAGGGTGGGG 58.638 50.000 0.00 0.00 46.75 4.96
66 67 2.651190 ACAAATACCTAAGGGTGGGGT 58.349 47.619 0.00 0.00 46.75 4.95
67 68 2.998186 ACAAATACCTAAGGGTGGGGTT 59.002 45.455 0.00 0.00 46.75 4.11
68 69 3.245479 ACAAATACCTAAGGGTGGGGTTG 60.245 47.826 0.00 1.49 46.75 3.77
69 70 2.371391 ATACCTAAGGGTGGGGTTGT 57.629 50.000 0.00 0.00 46.75 3.32
70 71 2.136974 TACCTAAGGGTGGGGTTGTT 57.863 50.000 0.00 0.00 46.75 2.83
71 72 0.481128 ACCTAAGGGTGGGGTTGTTG 59.519 55.000 0.00 0.00 45.43 3.33
72 73 0.481128 CCTAAGGGTGGGGTTGTTGT 59.519 55.000 0.00 0.00 0.00 3.32
73 74 1.616159 CTAAGGGTGGGGTTGTTGTG 58.384 55.000 0.00 0.00 0.00 3.33
74 75 0.186386 TAAGGGTGGGGTTGTTGTGG 59.814 55.000 0.00 0.00 0.00 4.17
75 76 1.881057 AAGGGTGGGGTTGTTGTGGT 61.881 55.000 0.00 0.00 0.00 4.16
76 77 2.131067 GGGTGGGGTTGTTGTGGTG 61.131 63.158 0.00 0.00 0.00 4.17
77 78 2.131067 GGTGGGGTTGTTGTGGTGG 61.131 63.158 0.00 0.00 0.00 4.61
78 79 2.443016 TGGGGTTGTTGTGGTGGC 60.443 61.111 0.00 0.00 0.00 5.01
79 80 3.601685 GGGGTTGTTGTGGTGGCG 61.602 66.667 0.00 0.00 0.00 5.69
80 81 4.279043 GGGTTGTTGTGGTGGCGC 62.279 66.667 0.00 0.00 0.00 6.53
81 82 4.622456 GGTTGTTGTGGTGGCGCG 62.622 66.667 0.00 0.00 0.00 6.86
85 86 4.264638 GTTGTGGTGGCGCGCTTT 62.265 61.111 32.29 0.00 0.00 3.51
86 87 4.263209 TTGTGGTGGCGCGCTTTG 62.263 61.111 32.29 0.00 0.00 2.77
95 96 4.705519 CGCGCTTTGGTGCCAAGG 62.706 66.667 5.56 8.49 45.20 3.61
96 97 3.294493 GCGCTTTGGTGCCAAGGA 61.294 61.111 15.88 0.00 42.54 3.36
97 98 2.956987 CGCTTTGGTGCCAAGGAG 59.043 61.111 15.88 9.46 37.24 3.69
98 99 2.629656 CGCTTTGGTGCCAAGGAGG 61.630 63.158 15.88 4.22 37.24 4.30
99 100 1.531602 GCTTTGGTGCCAAGGAGGT 60.532 57.895 15.88 0.00 40.61 3.85
100 101 1.809567 GCTTTGGTGCCAAGGAGGTG 61.810 60.000 15.88 1.14 40.61 4.00
101 102 0.468029 CTTTGGTGCCAAGGAGGTGT 60.468 55.000 7.22 0.00 40.61 4.16
102 103 0.754957 TTTGGTGCCAAGGAGGTGTG 60.755 55.000 3.72 0.00 40.61 3.82
103 104 2.282462 GGTGCCAAGGAGGTGTGG 60.282 66.667 0.00 0.00 40.61 4.17
104 105 2.282462 GTGCCAAGGAGGTGTGGG 60.282 66.667 0.00 0.00 40.61 4.61
105 106 2.776526 TGCCAAGGAGGTGTGGGT 60.777 61.111 0.00 0.00 40.61 4.51
106 107 2.391130 TGCCAAGGAGGTGTGGGTT 61.391 57.895 0.00 0.00 40.61 4.11
107 108 1.603739 GCCAAGGAGGTGTGGGTTC 60.604 63.158 0.00 0.00 40.61 3.62
108 109 1.302511 CCAAGGAGGTGTGGGTTCG 60.303 63.158 0.00 0.00 0.00 3.95
109 110 1.752198 CAAGGAGGTGTGGGTTCGA 59.248 57.895 0.00 0.00 0.00 3.71
110 111 0.107831 CAAGGAGGTGTGGGTTCGAA 59.892 55.000 0.00 0.00 0.00 3.71
111 112 1.064825 AAGGAGGTGTGGGTTCGAAT 58.935 50.000 0.00 0.00 0.00 3.34
112 113 0.613777 AGGAGGTGTGGGTTCGAATC 59.386 55.000 0.00 0.00 0.00 2.52
113 114 0.392595 GGAGGTGTGGGTTCGAATCC 60.393 60.000 21.05 21.05 0.00 3.01
114 115 0.392595 GAGGTGTGGGTTCGAATCCC 60.393 60.000 24.55 23.01 44.81 3.85
120 121 3.569873 GGGTTCGAATCCCACATGT 57.430 52.632 17.16 0.00 44.05 3.21
121 122 1.094785 GGGTTCGAATCCCACATGTG 58.905 55.000 17.16 19.31 44.05 3.21
122 123 0.451783 GGTTCGAATCCCACATGTGC 59.548 55.000 20.81 5.34 0.00 4.57
123 124 1.164411 GTTCGAATCCCACATGTGCA 58.836 50.000 20.81 9.21 0.00 4.57
124 125 1.539388 GTTCGAATCCCACATGTGCAA 59.461 47.619 20.81 10.43 0.00 4.08
125 126 2.127271 TCGAATCCCACATGTGCAAT 57.873 45.000 20.81 12.29 0.00 3.56
126 127 3.274095 TCGAATCCCACATGTGCAATA 57.726 42.857 20.81 5.29 0.00 1.90
127 128 3.819368 TCGAATCCCACATGTGCAATAT 58.181 40.909 20.81 7.39 0.00 1.28
128 129 4.206375 TCGAATCCCACATGTGCAATATT 58.794 39.130 20.81 14.82 0.00 1.28
129 130 4.644234 TCGAATCCCACATGTGCAATATTT 59.356 37.500 20.81 7.26 0.00 1.40
130 131 5.126869 TCGAATCCCACATGTGCAATATTTT 59.873 36.000 20.81 6.26 0.00 1.82
131 132 5.811613 CGAATCCCACATGTGCAATATTTTT 59.188 36.000 20.81 4.78 0.00 1.94
157 158 4.174411 TCATGTGGTAGACGTGAAGAAG 57.826 45.455 0.00 0.00 45.82 2.85
158 159 3.572682 TCATGTGGTAGACGTGAAGAAGT 59.427 43.478 0.00 0.00 45.82 3.01
159 160 3.637998 TGTGGTAGACGTGAAGAAGTC 57.362 47.619 0.00 0.00 37.63 3.01
160 161 2.031420 TGTGGTAGACGTGAAGAAGTCG 60.031 50.000 0.00 0.00 41.86 4.18
161 162 1.068748 TGGTAGACGTGAAGAAGTCGC 60.069 52.381 0.00 0.00 41.86 5.19
162 163 1.068748 GGTAGACGTGAAGAAGTCGCA 60.069 52.381 0.00 0.00 41.86 5.10
163 164 2.243407 GTAGACGTGAAGAAGTCGCAG 58.757 52.381 0.00 0.00 41.86 5.18
164 165 0.669077 AGACGTGAAGAAGTCGCAGT 59.331 50.000 0.00 0.00 41.86 4.40
165 166 1.067212 AGACGTGAAGAAGTCGCAGTT 59.933 47.619 0.00 0.00 41.86 3.16
166 167 1.859080 GACGTGAAGAAGTCGCAGTTT 59.141 47.619 0.00 0.00 36.47 2.66
167 168 2.277084 ACGTGAAGAAGTCGCAGTTTT 58.723 42.857 0.00 0.00 36.47 2.43
168 169 2.284417 ACGTGAAGAAGTCGCAGTTTTC 59.716 45.455 0.00 0.00 36.47 2.29
169 170 2.540101 CGTGAAGAAGTCGCAGTTTTCT 59.460 45.455 0.00 0.00 36.47 2.52
170 171 3.362110 CGTGAAGAAGTCGCAGTTTTCTC 60.362 47.826 0.00 0.00 36.47 2.87
171 172 3.555956 GTGAAGAAGTCGCAGTTTTCTCA 59.444 43.478 0.00 0.00 36.70 3.27
172 173 3.804325 TGAAGAAGTCGCAGTTTTCTCAG 59.196 43.478 0.00 0.00 32.29 3.35
173 174 3.735237 AGAAGTCGCAGTTTTCTCAGA 57.265 42.857 0.00 0.00 28.74 3.27
174 175 3.648009 AGAAGTCGCAGTTTTCTCAGAG 58.352 45.455 0.00 0.00 28.74 3.35
175 176 2.447244 AGTCGCAGTTTTCTCAGAGG 57.553 50.000 0.00 0.00 0.00 3.69
176 177 1.689273 AGTCGCAGTTTTCTCAGAGGT 59.311 47.619 0.00 0.00 0.00 3.85
177 178 1.795286 GTCGCAGTTTTCTCAGAGGTG 59.205 52.381 0.00 0.00 0.00 4.00
178 179 1.151668 CGCAGTTTTCTCAGAGGTGG 58.848 55.000 0.00 0.00 0.00 4.61
179 180 1.528129 GCAGTTTTCTCAGAGGTGGG 58.472 55.000 0.00 0.00 0.00 4.61
180 181 1.528129 CAGTTTTCTCAGAGGTGGGC 58.472 55.000 0.00 0.00 0.00 5.36
181 182 0.035458 AGTTTTCTCAGAGGTGGGCG 59.965 55.000 0.00 0.00 0.00 6.13
182 183 1.302511 TTTTCTCAGAGGTGGGCGC 60.303 57.895 0.00 0.00 0.00 6.53
183 184 3.589654 TTTCTCAGAGGTGGGCGCG 62.590 63.158 0.00 0.00 0.00 6.86
200 201 4.794164 GCGAGATGTGCGAGAGAA 57.206 55.556 0.00 0.00 0.00 2.87
201 202 2.576083 GCGAGATGTGCGAGAGAAG 58.424 57.895 0.00 0.00 0.00 2.85
202 203 1.478622 GCGAGATGTGCGAGAGAAGC 61.479 60.000 0.00 0.00 0.00 3.86
203 204 0.179153 CGAGATGTGCGAGAGAAGCA 60.179 55.000 0.00 0.00 42.99 3.91
204 205 1.558741 GAGATGTGCGAGAGAAGCAG 58.441 55.000 0.00 0.00 46.10 4.24
205 206 0.175302 AGATGTGCGAGAGAAGCAGG 59.825 55.000 0.00 0.00 46.10 4.85
206 207 0.108424 GATGTGCGAGAGAAGCAGGT 60.108 55.000 0.00 0.00 46.10 4.00
207 208 0.322975 ATGTGCGAGAGAAGCAGGTT 59.677 50.000 0.00 0.00 46.10 3.50
208 209 0.106708 TGTGCGAGAGAAGCAGGTTT 59.893 50.000 0.00 0.00 46.10 3.27
209 210 0.793250 GTGCGAGAGAAGCAGGTTTC 59.207 55.000 0.00 0.00 46.10 2.78
210 211 0.681733 TGCGAGAGAAGCAGGTTTCT 59.318 50.000 0.00 0.00 40.01 2.52
214 215 3.145228 GAGAAGCAGGTTTCTCGGG 57.855 57.895 9.60 0.00 42.44 5.14
215 216 1.003233 AGAAGCAGGTTTCTCGGGC 60.003 57.895 0.00 0.00 31.97 6.13
216 217 2.358737 AAGCAGGTTTCTCGGGCG 60.359 61.111 0.00 0.00 0.00 6.13
217 218 2.781595 GAAGCAGGTTTCTCGGGCGA 62.782 60.000 0.00 0.00 0.00 5.54
218 219 2.788191 AAGCAGGTTTCTCGGGCGAG 62.788 60.000 0.00 0.00 43.21 5.03
219 220 2.657237 CAGGTTTCTCGGGCGAGT 59.343 61.111 0.00 0.00 42.49 4.18
220 221 1.446272 CAGGTTTCTCGGGCGAGTC 60.446 63.158 0.00 0.00 42.49 3.36
221 222 1.606889 AGGTTTCTCGGGCGAGTCT 60.607 57.895 0.00 0.00 42.49 3.24
222 223 1.446272 GGTTTCTCGGGCGAGTCTG 60.446 63.158 0.00 0.00 42.49 3.51
223 224 2.095252 GTTTCTCGGGCGAGTCTGC 61.095 63.158 0.00 0.00 42.49 4.26
224 225 2.570284 TTTCTCGGGCGAGTCTGCA 61.570 57.895 0.00 0.00 42.49 4.41
225 226 2.492449 TTTCTCGGGCGAGTCTGCAG 62.492 60.000 7.63 7.63 42.49 4.41
226 227 4.504916 CTCGGGCGAGTCTGCAGG 62.505 72.222 15.13 0.00 37.47 4.85
229 230 4.459089 GGGCGAGTCTGCAGGGTC 62.459 72.222 15.13 9.91 36.28 4.46
230 231 3.695606 GGCGAGTCTGCAGGGTCA 61.696 66.667 15.13 0.00 36.28 4.02
231 232 2.581354 GCGAGTCTGCAGGGTCAT 59.419 61.111 15.13 0.00 34.15 3.06
232 233 1.078848 GCGAGTCTGCAGGGTCATT 60.079 57.895 15.13 0.00 34.15 2.57
233 234 1.086634 GCGAGTCTGCAGGGTCATTC 61.087 60.000 15.13 0.00 34.15 2.67
234 235 0.247460 CGAGTCTGCAGGGTCATTCA 59.753 55.000 15.13 0.00 0.00 2.57
235 236 1.738365 CGAGTCTGCAGGGTCATTCAG 60.738 57.143 15.13 0.00 0.00 3.02
236 237 0.617413 AGTCTGCAGGGTCATTCAGG 59.383 55.000 15.13 0.00 0.00 3.86
237 238 0.615331 GTCTGCAGGGTCATTCAGGA 59.385 55.000 15.13 0.00 0.00 3.86
238 239 0.907486 TCTGCAGGGTCATTCAGGAG 59.093 55.000 15.13 0.00 0.00 3.69
239 240 0.907486 CTGCAGGGTCATTCAGGAGA 59.093 55.000 5.57 0.00 0.00 3.71
240 241 1.280133 CTGCAGGGTCATTCAGGAGAA 59.720 52.381 5.57 0.00 38.31 2.87
241 242 1.704628 TGCAGGGTCATTCAGGAGAAA 59.295 47.619 0.00 0.00 37.29 2.52
242 243 2.290514 TGCAGGGTCATTCAGGAGAAAG 60.291 50.000 0.00 0.00 37.29 2.62
243 244 2.363683 CAGGGTCATTCAGGAGAAAGC 58.636 52.381 0.00 0.00 37.29 3.51
244 245 1.065854 AGGGTCATTCAGGAGAAAGCG 60.066 52.381 0.00 0.00 37.29 4.68
245 246 1.373570 GGTCATTCAGGAGAAAGCGG 58.626 55.000 0.00 0.00 37.29 5.52
246 247 1.373570 GTCATTCAGGAGAAAGCGGG 58.626 55.000 0.00 0.00 37.29 6.13
247 248 0.253044 TCATTCAGGAGAAAGCGGGG 59.747 55.000 0.00 0.00 37.29 5.73
248 249 0.035056 CATTCAGGAGAAAGCGGGGT 60.035 55.000 0.00 0.00 37.29 4.95
249 250 0.253327 ATTCAGGAGAAAGCGGGGTC 59.747 55.000 0.00 0.00 37.29 4.46
250 251 2.125512 CAGGAGAAAGCGGGGTCG 60.126 66.667 0.00 0.00 39.81 4.79
251 252 2.283676 AGGAGAAAGCGGGGTCGA 60.284 61.111 0.00 0.00 39.00 4.20
252 253 1.911766 AGGAGAAAGCGGGGTCGAA 60.912 57.895 0.00 0.00 39.00 3.71
253 254 1.448013 GGAGAAAGCGGGGTCGAAG 60.448 63.158 0.00 0.00 39.00 3.79
254 255 1.448013 GAGAAAGCGGGGTCGAAGG 60.448 63.158 0.00 0.00 39.00 3.46
255 256 1.885163 GAGAAAGCGGGGTCGAAGGA 61.885 60.000 0.00 0.00 39.00 3.36
256 257 1.004200 GAAAGCGGGGTCGAAGGAA 60.004 57.895 0.00 0.00 39.00 3.36
257 258 1.003718 AAAGCGGGGTCGAAGGAAG 60.004 57.895 0.00 0.00 39.00 3.46
258 259 1.477685 AAAGCGGGGTCGAAGGAAGA 61.478 55.000 0.00 0.00 39.00 2.87
259 260 1.889530 AAGCGGGGTCGAAGGAAGAG 61.890 60.000 0.00 0.00 39.00 2.85
260 261 2.893398 CGGGGTCGAAGGAAGAGG 59.107 66.667 0.00 0.00 39.00 3.69
261 262 2.722201 CGGGGTCGAAGGAAGAGGG 61.722 68.421 0.00 0.00 39.00 4.30
262 263 1.305887 GGGGTCGAAGGAAGAGGGA 60.306 63.158 0.00 0.00 0.00 4.20
263 264 0.691413 GGGGTCGAAGGAAGAGGGAT 60.691 60.000 0.00 0.00 0.00 3.85
264 265 0.753867 GGGTCGAAGGAAGAGGGATC 59.246 60.000 0.00 0.00 0.00 3.36
265 266 0.386113 GGTCGAAGGAAGAGGGATCG 59.614 60.000 0.00 0.00 34.98 3.69
266 267 1.104630 GTCGAAGGAAGAGGGATCGT 58.895 55.000 0.00 0.00 35.20 3.73
267 268 1.103803 TCGAAGGAAGAGGGATCGTG 58.896 55.000 0.00 0.00 35.20 4.35
268 269 0.818296 CGAAGGAAGAGGGATCGTGT 59.182 55.000 0.00 0.00 0.00 4.49
269 270 1.469940 CGAAGGAAGAGGGATCGTGTG 60.470 57.143 0.00 0.00 0.00 3.82
270 271 0.905357 AAGGAAGAGGGATCGTGTGG 59.095 55.000 0.00 0.00 0.00 4.17
271 272 0.252284 AGGAAGAGGGATCGTGTGGT 60.252 55.000 0.00 0.00 0.00 4.16
272 273 1.006758 AGGAAGAGGGATCGTGTGGTA 59.993 52.381 0.00 0.00 0.00 3.25
273 274 1.136500 GGAAGAGGGATCGTGTGGTAC 59.864 57.143 0.00 0.00 0.00 3.34
274 275 2.100989 GAAGAGGGATCGTGTGGTACT 58.899 52.381 0.00 0.00 0.00 2.73
275 276 2.233305 AGAGGGATCGTGTGGTACTT 57.767 50.000 0.00 0.00 0.00 2.24
276 277 2.537143 AGAGGGATCGTGTGGTACTTT 58.463 47.619 0.00 0.00 0.00 2.66
277 278 3.705051 AGAGGGATCGTGTGGTACTTTA 58.295 45.455 0.00 0.00 0.00 1.85
278 279 4.091549 AGAGGGATCGTGTGGTACTTTAA 58.908 43.478 0.00 0.00 0.00 1.52
279 280 4.529377 AGAGGGATCGTGTGGTACTTTAAA 59.471 41.667 0.00 0.00 0.00 1.52
280 281 4.828829 AGGGATCGTGTGGTACTTTAAAG 58.171 43.478 13.76 13.76 0.00 1.85
281 282 4.285260 AGGGATCGTGTGGTACTTTAAAGT 59.715 41.667 23.58 23.58 42.91 2.66
282 283 4.390909 GGGATCGTGTGGTACTTTAAAGTG 59.609 45.833 27.40 11.34 40.07 3.16
283 284 5.232463 GGATCGTGTGGTACTTTAAAGTGA 58.768 41.667 27.40 15.80 40.07 3.41
284 285 5.697633 GGATCGTGTGGTACTTTAAAGTGAA 59.302 40.000 27.40 8.78 40.07 3.18
285 286 6.203338 GGATCGTGTGGTACTTTAAAGTGAAA 59.797 38.462 27.40 11.77 40.07 2.69
286 287 6.348621 TCGTGTGGTACTTTAAAGTGAAAC 57.651 37.500 27.40 20.96 40.07 2.78
287 288 5.873712 TCGTGTGGTACTTTAAAGTGAAACA 59.126 36.000 27.40 22.82 41.43 2.83
288 289 6.370994 TCGTGTGGTACTTTAAAGTGAAACAA 59.629 34.615 27.40 11.25 41.43 2.83
289 290 7.022384 CGTGTGGTACTTTAAAGTGAAACAAA 58.978 34.615 27.40 12.23 41.43 2.83
290 291 7.698970 CGTGTGGTACTTTAAAGTGAAACAAAT 59.301 33.333 27.40 3.10 41.43 2.32
298 299 9.185680 ACTTTAAAGTGAAACAAATAGAGGTGT 57.814 29.630 19.94 0.00 41.43 4.16
299 300 9.450807 CTTTAAAGTGAAACAAATAGAGGTGTG 57.549 33.333 7.07 0.00 41.43 3.82
300 301 8.740123 TTAAAGTGAAACAAATAGAGGTGTGA 57.260 30.769 0.00 0.00 41.43 3.58
301 302 6.619801 AAGTGAAACAAATAGAGGTGTGAC 57.380 37.500 0.00 0.00 41.43 3.67
302 303 5.680619 AGTGAAACAAATAGAGGTGTGACA 58.319 37.500 0.00 0.00 41.43 3.58
303 304 5.760253 AGTGAAACAAATAGAGGTGTGACAG 59.240 40.000 0.00 0.00 41.43 3.51
304 305 5.527582 GTGAAACAAATAGAGGTGTGACAGT 59.472 40.000 0.00 0.00 36.32 3.55
305 306 6.038271 GTGAAACAAATAGAGGTGTGACAGTT 59.962 38.462 0.00 0.00 36.32 3.16
306 307 6.601613 TGAAACAAATAGAGGTGTGACAGTTT 59.398 34.615 0.00 0.00 0.00 2.66
307 308 7.122055 TGAAACAAATAGAGGTGTGACAGTTTT 59.878 33.333 0.00 0.00 0.00 2.43
308 309 6.377327 ACAAATAGAGGTGTGACAGTTTTG 57.623 37.500 0.00 0.00 0.00 2.44
309 310 5.215160 CAAATAGAGGTGTGACAGTTTTGC 58.785 41.667 0.00 0.00 0.00 3.68
310 311 2.717639 AGAGGTGTGACAGTTTTGCT 57.282 45.000 0.00 0.00 0.00 3.91
311 312 3.004752 AGAGGTGTGACAGTTTTGCTT 57.995 42.857 0.00 0.00 0.00 3.91
312 313 4.150897 AGAGGTGTGACAGTTTTGCTTA 57.849 40.909 0.00 0.00 0.00 3.09
313 314 4.718961 AGAGGTGTGACAGTTTTGCTTAT 58.281 39.130 0.00 0.00 0.00 1.73
314 315 5.865085 AGAGGTGTGACAGTTTTGCTTATA 58.135 37.500 0.00 0.00 0.00 0.98
315 316 6.476378 AGAGGTGTGACAGTTTTGCTTATAT 58.524 36.000 0.00 0.00 0.00 0.86
316 317 6.372659 AGAGGTGTGACAGTTTTGCTTATATG 59.627 38.462 0.00 0.00 0.00 1.78
317 318 5.415701 AGGTGTGACAGTTTTGCTTATATGG 59.584 40.000 0.00 0.00 0.00 2.74
318 319 5.095490 GTGTGACAGTTTTGCTTATATGGC 58.905 41.667 0.00 0.00 0.00 4.40
319 320 4.764308 TGTGACAGTTTTGCTTATATGGCA 59.236 37.500 0.00 0.00 37.97 4.92
320 321 5.095490 GTGACAGTTTTGCTTATATGGCAC 58.905 41.667 0.00 2.77 39.29 5.01
321 322 5.335583 GTGACAGTTTTGCTTATATGGCACA 60.336 40.000 11.33 0.00 44.32 4.57
322 323 9.589488 TGTGACAGTTTTGCTTATATGGCACAC 62.589 40.741 13.93 6.25 46.68 3.82
339 340 4.437772 CACACATGTGCCAAATATCACA 57.562 40.909 25.68 0.00 45.81 3.58
340 341 4.417506 CACACATGTGCCAAATATCACAG 58.582 43.478 25.68 0.00 45.08 3.66
341 342 4.081406 ACACATGTGCCAAATATCACAGT 58.919 39.130 25.68 0.00 45.08 3.55
342 343 4.156556 ACACATGTGCCAAATATCACAGTC 59.843 41.667 25.68 0.00 45.08 3.51
343 344 3.696051 ACATGTGCCAAATATCACAGTCC 59.304 43.478 0.00 0.00 45.08 3.85
344 345 3.719268 TGTGCCAAATATCACAGTCCT 57.281 42.857 0.00 0.00 38.18 3.85
345 346 4.032960 TGTGCCAAATATCACAGTCCTT 57.967 40.909 0.00 0.00 38.18 3.36
346 347 4.406456 TGTGCCAAATATCACAGTCCTTT 58.594 39.130 0.00 0.00 38.18 3.11
347 348 4.218200 TGTGCCAAATATCACAGTCCTTTG 59.782 41.667 0.00 0.00 38.18 2.77
348 349 4.458989 GTGCCAAATATCACAGTCCTTTGA 59.541 41.667 0.00 0.00 33.63 2.69
349 350 5.048083 GTGCCAAATATCACAGTCCTTTGAA 60.048 40.000 0.00 0.00 33.63 2.69
350 351 5.716228 TGCCAAATATCACAGTCCTTTGAAT 59.284 36.000 0.00 0.00 0.00 2.57
351 352 6.889177 TGCCAAATATCACAGTCCTTTGAATA 59.111 34.615 0.00 0.00 0.00 1.75
352 353 7.395772 TGCCAAATATCACAGTCCTTTGAATAA 59.604 33.333 0.00 0.00 0.00 1.40
353 354 8.250332 GCCAAATATCACAGTCCTTTGAATAAA 58.750 33.333 0.00 0.00 0.00 1.40
354 355 9.573133 CCAAATATCACAGTCCTTTGAATAAAC 57.427 33.333 0.00 0.00 0.00 2.01
355 356 9.277565 CAAATATCACAGTCCTTTGAATAAACG 57.722 33.333 0.00 0.00 0.00 3.60
356 357 5.880054 ATCACAGTCCTTTGAATAAACGG 57.120 39.130 0.00 0.00 0.00 4.44
357 358 4.963373 TCACAGTCCTTTGAATAAACGGA 58.037 39.130 0.00 0.00 0.00 4.69
358 359 5.556915 TCACAGTCCTTTGAATAAACGGAT 58.443 37.500 0.00 0.00 30.91 4.18
359 360 5.642063 TCACAGTCCTTTGAATAAACGGATC 59.358 40.000 0.00 0.00 30.91 3.36
360 361 5.643777 CACAGTCCTTTGAATAAACGGATCT 59.356 40.000 0.00 0.00 30.91 2.75
361 362 5.643777 ACAGTCCTTTGAATAAACGGATCTG 59.356 40.000 0.00 0.00 34.36 2.90
362 363 5.065218 CAGTCCTTTGAATAAACGGATCTGG 59.935 44.000 6.47 0.00 31.03 3.86
363 364 5.045869 AGTCCTTTGAATAAACGGATCTGGA 60.046 40.000 6.47 0.00 30.91 3.86
364 365 5.646360 GTCCTTTGAATAAACGGATCTGGAA 59.354 40.000 6.47 0.00 30.91 3.53
365 366 6.150474 GTCCTTTGAATAAACGGATCTGGAAA 59.850 38.462 6.47 0.00 30.91 3.13
366 367 6.717540 TCCTTTGAATAAACGGATCTGGAAAA 59.282 34.615 6.47 0.00 0.00 2.29
367 368 7.231722 TCCTTTGAATAAACGGATCTGGAAAAA 59.768 33.333 6.47 0.00 0.00 1.94
385 386 3.859411 AAAAACTTTCAGGTTGCGACA 57.141 38.095 6.39 0.00 0.00 4.35
386 387 3.859411 AAAACTTTCAGGTTGCGACAA 57.141 38.095 6.39 0.00 0.00 3.18
387 388 3.420839 AAACTTTCAGGTTGCGACAAG 57.579 42.857 6.39 3.46 0.00 3.16
388 389 2.038387 ACTTTCAGGTTGCGACAAGT 57.962 45.000 6.39 4.12 0.00 3.16
389 390 1.670811 ACTTTCAGGTTGCGACAAGTG 59.329 47.619 6.39 0.21 0.00 3.16
390 391 1.939934 CTTTCAGGTTGCGACAAGTGA 59.060 47.619 6.39 2.76 0.00 3.41
391 392 1.295792 TTCAGGTTGCGACAAGTGAC 58.704 50.000 6.39 0.00 0.00 3.67
392 393 0.874175 TCAGGTTGCGACAAGTGACG 60.874 55.000 6.39 0.00 36.38 4.35
399 400 2.225348 CGACAAGTGACGCACATGT 58.775 52.632 16.67 16.67 46.56 3.21
401 402 2.225348 ACAAGTGACGCACATGTCG 58.775 52.632 12.74 13.71 41.44 4.35
402 403 1.831389 ACAAGTGACGCACATGTCGC 61.831 55.000 12.74 12.16 41.44 5.19
404 405 2.935191 GTGACGCACATGTCGCAA 59.065 55.556 16.80 5.41 46.15 4.85
405 406 1.438710 GTGACGCACATGTCGCAAC 60.439 57.895 16.80 11.71 46.15 4.17
406 407 2.202046 GACGCACATGTCGCAACG 60.202 61.111 16.80 9.60 0.00 4.10
407 408 2.938823 GACGCACATGTCGCAACGT 61.939 57.895 16.80 12.15 36.30 3.99
408 409 2.497419 CGCACATGTCGCAACGTG 60.497 61.111 16.80 0.00 46.07 4.49
409 410 2.127270 GCACATGTCGCAACGTGG 60.127 61.111 13.27 0.00 45.11 4.94
410 411 2.555782 CACATGTCGCAACGTGGG 59.444 61.111 1.40 0.00 45.11 4.61
411 412 1.958715 CACATGTCGCAACGTGGGA 60.959 57.895 1.40 0.00 46.92 4.37
412 413 1.227704 ACATGTCGCAACGTGGGAA 60.228 52.632 1.40 0.00 45.11 3.97
413 414 1.227999 ACATGTCGCAACGTGGGAAG 61.228 55.000 1.40 0.00 45.11 3.46
414 415 1.671054 ATGTCGCAACGTGGGAAGG 60.671 57.895 0.00 0.00 41.08 3.46
415 416 2.280592 GTCGCAACGTGGGAAGGT 60.281 61.111 0.00 0.00 41.08 3.50
416 417 2.280524 TCGCAACGTGGGAAGGTG 60.281 61.111 0.00 0.00 36.34 4.00
417 418 2.280524 CGCAACGTGGGAAGGTGA 60.281 61.111 0.00 0.00 31.21 4.02
418 419 2.317609 CGCAACGTGGGAAGGTGAG 61.318 63.158 0.00 0.00 31.21 3.51
419 420 1.070786 GCAACGTGGGAAGGTGAGA 59.929 57.895 0.00 0.00 0.00 3.27
420 421 0.951040 GCAACGTGGGAAGGTGAGAG 60.951 60.000 0.00 0.00 0.00 3.20
421 422 0.393077 CAACGTGGGAAGGTGAGAGT 59.607 55.000 0.00 0.00 0.00 3.24
422 423 0.393077 AACGTGGGAAGGTGAGAGTG 59.607 55.000 0.00 0.00 0.00 3.51
423 424 0.469331 ACGTGGGAAGGTGAGAGTGA 60.469 55.000 0.00 0.00 0.00 3.41
424 425 0.038159 CGTGGGAAGGTGAGAGTGAC 60.038 60.000 0.00 0.00 0.00 3.67
425 426 0.321996 GTGGGAAGGTGAGAGTGACC 59.678 60.000 0.00 0.00 0.00 4.02
426 427 0.191064 TGGGAAGGTGAGAGTGACCT 59.809 55.000 0.00 0.00 46.36 3.85
433 434 4.608948 AGGTGAGAGTGACCTTACAAAG 57.391 45.455 0.00 0.00 41.31 2.77
434 435 4.223953 AGGTGAGAGTGACCTTACAAAGA 58.776 43.478 0.00 0.00 41.31 2.52
435 436 4.654262 AGGTGAGAGTGACCTTACAAAGAA 59.346 41.667 0.00 0.00 41.31 2.52
436 437 5.308237 AGGTGAGAGTGACCTTACAAAGAAT 59.692 40.000 0.00 0.00 41.31 2.40
437 438 5.409826 GGTGAGAGTGACCTTACAAAGAATG 59.590 44.000 0.00 0.00 0.00 2.67
438 439 6.223852 GTGAGAGTGACCTTACAAAGAATGA 58.776 40.000 0.00 0.00 0.00 2.57
439 440 6.876257 GTGAGAGTGACCTTACAAAGAATGAT 59.124 38.462 0.00 0.00 0.00 2.45
440 441 7.064016 GTGAGAGTGACCTTACAAAGAATGATC 59.936 40.741 0.00 0.00 0.00 2.92
441 442 7.038729 TGAGAGTGACCTTACAAAGAATGATCT 60.039 37.037 0.00 0.00 37.57 2.75
443 444 8.816894 AGAGTGACCTTACAAAGAATGATCTTA 58.183 33.333 0.00 0.00 45.19 2.10
444 445 9.436957 GAGTGACCTTACAAAGAATGATCTTAA 57.563 33.333 0.00 0.00 45.19 1.85
445 446 9.220767 AGTGACCTTACAAAGAATGATCTTAAC 57.779 33.333 0.00 0.00 45.19 2.01
446 447 9.220767 GTGACCTTACAAAGAATGATCTTAACT 57.779 33.333 0.00 0.00 45.19 2.24
542 543 2.249413 CTCGGATCAGCCACAAGCCT 62.249 60.000 0.00 0.00 45.47 4.58
603 604 4.868026 CGGCCATCCAAATACCGA 57.132 55.556 2.24 0.00 46.71 4.69
678 679 2.757077 CCTTTTCCCGCCACCTCT 59.243 61.111 0.00 0.00 0.00 3.69
679 680 1.377333 CCTTTTCCCGCCACCTCTC 60.377 63.158 0.00 0.00 0.00 3.20
680 681 1.377333 CTTTTCCCGCCACCTCTCC 60.377 63.158 0.00 0.00 0.00 3.71
681 682 2.821679 CTTTTCCCGCCACCTCTCCC 62.822 65.000 0.00 0.00 0.00 4.30
682 683 3.864983 TTTCCCGCCACCTCTCCCT 62.865 63.158 0.00 0.00 0.00 4.20
683 684 2.465010 TTTCCCGCCACCTCTCCCTA 62.465 60.000 0.00 0.00 0.00 3.53
684 685 3.155167 CCCGCCACCTCTCCCTAC 61.155 72.222 0.00 0.00 0.00 3.18
685 686 2.042843 CCGCCACCTCTCCCTACT 60.043 66.667 0.00 0.00 0.00 2.57
690 691 0.397816 CCACCTCTCCCTACTCCCTG 60.398 65.000 0.00 0.00 0.00 4.45
693 694 1.830408 CTCTCCCTACTCCCTGCCG 60.830 68.421 0.00 0.00 0.00 5.69
716 717 2.836360 CGCCGTAGCCCTTCCCTA 60.836 66.667 0.00 0.00 34.57 3.53
752 753 2.178912 TTCCACCGAGCGAAAGAAAT 57.821 45.000 0.00 0.00 0.00 2.17
754 755 3.536956 TCCACCGAGCGAAAGAAATAT 57.463 42.857 0.00 0.00 0.00 1.28
757 758 3.181774 CCACCGAGCGAAAGAAATATACG 59.818 47.826 0.00 0.00 0.00 3.06
842 865 1.198713 TCAGCTGTCCAATCTCCTCC 58.801 55.000 14.67 0.00 0.00 4.30
844 867 0.043940 AGCTGTCCAATCTCCTCCCT 59.956 55.000 0.00 0.00 0.00 4.20
852 875 0.399806 AATCTCCTCCCTCTGGCCTC 60.400 60.000 3.32 0.00 0.00 4.70
876 899 3.316573 CTCCGTCTCCCCTTGTGCC 62.317 68.421 0.00 0.00 0.00 5.01
921 950 1.526455 CTCGTCCTCCTCTACCCGG 60.526 68.421 0.00 0.00 0.00 5.73
993 1022 2.550180 CGCAAGATCGATCTAGTCCTCA 59.450 50.000 27.52 0.00 43.02 3.86
1017 1046 1.570979 GAAATGGGGGATGAGAGGGTT 59.429 52.381 0.00 0.00 0.00 4.11
1037 1066 1.245732 GAGGCCATGGAGATTGATGC 58.754 55.000 18.40 0.00 0.00 3.91
1119 1148 4.366586 GAATCTACTACGGTAAAGTGCCC 58.633 47.826 0.00 0.00 0.00 5.36
1166 1195 2.636893 CAATTTGTGGGATGGTTTGGGA 59.363 45.455 0.00 0.00 0.00 4.37
1207 1237 4.101741 AGGTAGATCTGCATTCCTTGTACC 59.898 45.833 13.14 4.10 0.00 3.34
1232 1262 6.019762 GCGTTAGTTACAAAATACCAGAAGC 58.980 40.000 0.00 0.00 0.00 3.86
1267 1297 4.966965 TCACGCAAAGGTTTAGTTTTGA 57.033 36.364 1.48 0.00 36.61 2.69
1272 1302 4.085107 CGCAAAGGTTTAGTTTTGATGCAC 60.085 41.667 0.00 0.00 36.61 4.57
1275 1305 6.699642 GCAAAGGTTTAGTTTTGATGCACTTA 59.300 34.615 0.00 0.00 36.61 2.24
1407 1441 7.447545 ACACTAAATAAAAGAGAAACCCAGTCC 59.552 37.037 0.00 0.00 0.00 3.85
1419 1453 0.742281 CCCAGTCCGTGAGCTGATTG 60.742 60.000 0.00 0.00 34.87 2.67
1446 1480 5.517322 ACTTCTCGAACTGTAGACAACTT 57.483 39.130 0.00 0.00 0.00 2.66
1452 1486 3.304525 CGAACTGTAGACAACTTCGGTCT 60.305 47.826 11.63 0.00 46.71 3.85
1518 1553 1.978542 CTGAAAGATGCAACAGCTGC 58.021 50.000 15.27 0.49 45.15 5.25
1631 1666 7.869429 GCAAACTAAATCCCATCATTTGATAGG 59.131 37.037 0.00 0.00 35.10 2.57
1661 1702 4.016444 GCAAGACCAGACCAAATGGAATA 58.984 43.478 6.42 0.00 40.51 1.75
1662 1703 4.142381 GCAAGACCAGACCAAATGGAATAC 60.142 45.833 6.42 0.00 40.51 1.89
1663 1704 5.256474 CAAGACCAGACCAAATGGAATACT 58.744 41.667 6.42 0.00 40.51 2.12
1664 1705 5.104259 AGACCAGACCAAATGGAATACTC 57.896 43.478 6.42 0.00 40.51 2.59
1665 1706 4.785376 AGACCAGACCAAATGGAATACTCT 59.215 41.667 6.42 0.00 40.51 3.24
1666 1707 5.251700 AGACCAGACCAAATGGAATACTCTT 59.748 40.000 6.42 0.00 40.51 2.85
1698 1739 5.388573 GTGACAATTATTTAACGCACGATCG 59.611 40.000 14.88 14.88 0.00 3.69
1701 1742 6.405216 ACAATTATTTAACGCACGATCGTAC 58.595 36.000 22.26 15.07 42.46 3.67
1798 1839 3.375782 ACCAATTTCTTGTGCTTGCTC 57.624 42.857 0.00 0.00 0.00 4.26
1851 1896 2.303022 CTCAGTCTCTTTTGCCCCACTA 59.697 50.000 0.00 0.00 0.00 2.74
1857 1902 6.042093 CAGTCTCTTTTGCCCCACTATAGATA 59.958 42.308 6.78 0.00 0.00 1.98
1863 1908 6.648879 TTTGCCCCACTATAGATAAAATGC 57.351 37.500 6.78 0.68 0.00 3.56
1865 1910 5.952387 TGCCCCACTATAGATAAAATGCTT 58.048 37.500 6.78 0.00 0.00 3.91
1961 2006 3.149196 TGGTGATTTCTTCAAGTGGCTC 58.851 45.455 0.00 0.00 35.70 4.70
2040 2085 5.351740 GTCCTGCTCTTTGTTAACTGGATAC 59.648 44.000 7.22 0.00 32.06 2.24
2152 2197 3.071479 TGCGGTTTCAGTCCTTTGATAC 58.929 45.455 0.00 0.00 0.00 2.24
2318 2363 8.263640 TGTGTGCTATTGCCCAATAAAAATATT 58.736 29.630 0.00 0.00 38.71 1.28
2486 2531 4.614555 CAACTGTTGCTAAGTGTGAACA 57.385 40.909 7.70 0.00 0.00 3.18
2492 2537 4.036262 TGTTGCTAAGTGTGAACATTGTCC 59.964 41.667 0.00 0.00 0.00 4.02
2607 2652 5.817296 TGTCATCAAAATCCTGGATACTTCG 59.183 40.000 10.13 0.00 37.61 3.79
2626 2671 5.648092 ACTTCGCTTAGAGGCATGTTATTTT 59.352 36.000 0.00 0.00 0.00 1.82
2680 2725 5.996513 ACATGATGCTATGAAGATTCTGGAC 59.003 40.000 0.00 0.00 0.00 4.02
2682 2727 5.363101 TGATGCTATGAAGATTCTGGACAC 58.637 41.667 0.00 0.00 0.00 3.67
2875 2920 7.482169 AGAGAACCTTTTCTTTGTTTCCTTT 57.518 32.000 0.00 0.00 42.53 3.11
2889 2934 4.201970 TGTTTCCTTTGTTTGGTGATCGTC 60.202 41.667 0.00 0.00 0.00 4.20
2916 2962 9.965902 AAACTCATCTTTATATTTCTGTCAGGT 57.034 29.630 0.00 0.00 0.00 4.00
2960 3006 2.148916 TTGCTGACTACTTCCGTGTG 57.851 50.000 0.00 0.00 0.00 3.82
2976 3022 5.421277 TCCGTGTGTATAAGGTGGTATTTG 58.579 41.667 0.00 0.00 0.00 2.32
3026 3072 4.992951 AGCCATCTTTCTGAAATTTGTTGC 59.007 37.500 2.88 4.93 0.00 4.17
3139 3185 6.577103 TCTAAACCATCTCTCTACTTGCATG 58.423 40.000 0.00 0.00 0.00 4.06
3430 3511 5.303971 GCTAGTGAGCTCCATGATAAATGT 58.696 41.667 12.15 0.00 45.98 2.71
3795 3930 6.617879 AGGTAAAAGCAAAATTATCACCGAC 58.382 36.000 0.00 0.00 0.00 4.79
3805 3940 1.143373 TATCACCGACGCATGTTCGC 61.143 55.000 11.98 0.00 0.00 4.70
3988 4129 3.369756 GGTGTGAATTTGCATGCATGAAG 59.630 43.478 30.64 4.30 0.00 3.02
4039 4181 6.361433 TGGAAGTTCTATTTTGTCTGTTCCA 58.639 36.000 2.25 0.00 38.83 3.53
4114 4256 3.242511 GCTTTCACTTTGCTTGCTTTTGG 60.243 43.478 0.00 0.00 0.00 3.28
4125 4267 3.217626 CTTGCTTTTGGAGGACTCAACT 58.782 45.455 1.32 0.00 0.00 3.16
4149 4296 9.450807 ACTATGATTTGATTATAAAAACTGCGC 57.549 29.630 0.00 0.00 0.00 6.09
4194 4341 7.121168 TCTGAATGATAATTTTGTCACCTCACC 59.879 37.037 0.00 0.00 31.01 4.02
4212 4359 5.007724 CCTCACCACTTCTAACAGTTGTTTC 59.992 44.000 2.46 0.00 39.31 2.78
4483 4645 2.259012 TGTACCTATCCGGGTTTGTGT 58.741 47.619 0.00 0.00 40.48 3.72
4489 4651 2.963599 ATCCGGGTTTGTGTTAAGGT 57.036 45.000 0.00 0.00 0.00 3.50
4494 4656 2.351350 CGGGTTTGTGTTAAGGTGCATC 60.351 50.000 0.00 0.00 0.00 3.91
4515 4679 6.034256 GCATCATTGTAGAACTTGCAAATGAC 59.966 38.462 8.02 0.35 0.00 3.06
4516 4680 6.631971 TCATTGTAGAACTTGCAAATGACA 57.368 33.333 0.00 0.00 0.00 3.58
4517 4681 7.218228 TCATTGTAGAACTTGCAAATGACAT 57.782 32.000 0.00 0.00 0.00 3.06
4518 4682 7.307694 TCATTGTAGAACTTGCAAATGACATC 58.692 34.615 0.00 0.00 0.00 3.06
4519 4683 6.882610 TTGTAGAACTTGCAAATGACATCT 57.117 33.333 0.00 1.04 0.00 2.90
5031 5195 7.178451 TCCCTCCTTTCCAAAATATTTGAAGTC 59.822 37.037 0.39 0.00 0.00 3.01
5044 5208 3.782656 TTGAAGTCCTAGGTTTGTCCC 57.217 47.619 9.08 0.00 36.75 4.46
5085 5249 8.697507 AAGTTTGACCAAATCTACTCAGAATT 57.302 30.769 0.00 0.00 33.50 2.17
5189 5354 6.299805 TCCTATATACATGTTCATGAGGCC 57.700 41.667 17.96 0.00 0.00 5.19
5270 5435 2.711542 ACCGCTTATAGTGCAAAGCTT 58.288 42.857 16.55 0.00 44.72 3.74
5317 5482 4.720046 TGGTAAAAGCTCCATGTACAACA 58.280 39.130 0.00 0.00 0.00 3.33
5325 5490 3.854666 CTCCATGTACAACAGAGACAGG 58.145 50.000 12.47 0.25 0.00 4.00
5417 5587 6.767902 TCATTCATCCTATTTGTTGCTCTACC 59.232 38.462 0.00 0.00 0.00 3.18
5577 5765 7.332182 GCAAGCATATTACTGACTAATACTCCC 59.668 40.741 0.00 0.00 31.33 4.30
5586 5774 7.407393 ACTGACTAATACTCCCTCTGTAAAC 57.593 40.000 0.00 0.00 0.00 2.01
5589 5777 8.749026 TGACTAATACTCCCTCTGTAAACTAG 57.251 38.462 0.00 0.00 0.00 2.57
5598 5786 9.134055 ACTCCCTCTGTAAACTAGTATAATGAC 57.866 37.037 0.00 0.00 0.00 3.06
5599 5787 8.162878 TCCCTCTGTAAACTAGTATAATGACG 57.837 38.462 0.00 0.00 0.00 4.35
5660 5848 6.512297 TGTATCAGCTATTCTTGTTATGCGA 58.488 36.000 0.00 0.00 0.00 5.10
5664 5852 3.871594 AGCTATTCTTGTTATGCGACACC 59.128 43.478 0.00 0.00 0.00 4.16
5691 5879 4.072131 GTGCCATGAGGTCTTTGACTTAA 58.928 43.478 0.00 0.00 37.19 1.85
5707 5895 3.093057 ACTTAAGACAGAGGATGCTCGT 58.907 45.455 10.09 9.73 0.00 4.18
5753 5941 0.251209 GACCCTTCCTCCCCAAACAC 60.251 60.000 0.00 0.00 0.00 3.32
5754 5942 1.076727 CCCTTCCTCCCCAAACACC 59.923 63.158 0.00 0.00 0.00 4.16
5755 5943 1.303317 CCTTCCTCCCCAAACACCG 60.303 63.158 0.00 0.00 0.00 4.94
5777 5965 4.380444 CGGATAACCCAGTCACAAAATTGG 60.380 45.833 0.00 0.00 34.14 3.16
5783 5971 3.366273 CCCAGTCACAAAATTGGTCATCG 60.366 47.826 0.00 0.00 0.00 3.84
5792 5980 5.473162 ACAAAATTGGTCATCGAATCAGACA 59.527 36.000 11.16 0.00 34.04 3.41
5809 5997 0.971386 ACATTCAAAGCCAGCCCAAG 59.029 50.000 0.00 0.00 0.00 3.61
5835 6023 4.759205 GGGGGCGCTTGGATGGTT 62.759 66.667 7.64 0.00 0.00 3.67
5866 6054 4.202346 CCAAATTGACCAAGTCCACCAAAT 60.202 41.667 0.00 0.00 0.00 2.32
5867 6055 5.367302 CAAATTGACCAAGTCCACCAAATT 58.633 37.500 0.00 0.00 0.00 1.82
5868 6056 4.605640 ATTGACCAAGTCCACCAAATTG 57.394 40.909 0.00 0.00 0.00 2.32
5869 6057 3.304911 TGACCAAGTCCACCAAATTGA 57.695 42.857 0.00 0.00 0.00 2.57
5870 6058 3.843422 TGACCAAGTCCACCAAATTGAT 58.157 40.909 0.00 0.00 0.00 2.57
5888 6076 0.251341 ATTGCCCTTTTCTCGTGCCT 60.251 50.000 0.00 0.00 0.00 4.75
5914 6103 2.715880 TCCCTTCCATGCATATAAGCCA 59.284 45.455 0.00 0.00 0.00 4.75
5916 6105 3.499202 CCCTTCCATGCATATAAGCCAGT 60.499 47.826 0.00 0.00 0.00 4.00
5938 6127 0.895559 CCACCTCCAACTTTGCTCCC 60.896 60.000 0.00 0.00 0.00 4.30
5946 6135 2.223805 CCAACTTTGCTCCCTGTTTGTC 60.224 50.000 0.00 0.00 0.00 3.18
5947 6136 2.689983 CAACTTTGCTCCCTGTTTGTCT 59.310 45.455 0.00 0.00 0.00 3.41
5948 6137 3.018423 ACTTTGCTCCCTGTTTGTCTT 57.982 42.857 0.00 0.00 0.00 3.01
5949 6138 4.164843 ACTTTGCTCCCTGTTTGTCTTA 57.835 40.909 0.00 0.00 0.00 2.10
5963 6152 6.931838 TGTTTGTCTTATCGTCCTTGTCTAT 58.068 36.000 0.00 0.00 0.00 1.98
5980 6169 5.924356 TGTCTATCATCCGATTTAGCCAAA 58.076 37.500 0.00 0.00 32.73 3.28
5992 6181 6.018262 CCGATTTAGCCAAATTAGATGTCGAA 60.018 38.462 0.00 0.00 34.44 3.71
6028 6217 1.448893 CCATTGCTGCCATGGTTGC 60.449 57.895 21.27 17.67 0.00 4.17
6030 6219 0.739462 CATTGCTGCCATGGTTGCTG 60.739 55.000 24.23 15.26 0.00 4.41
6052 6241 0.615331 TCAGCTGACTTCATGGGGTC 59.385 55.000 13.74 10.57 0.00 4.46
6053 6242 0.393537 CAGCTGACTTCATGGGGTCC 60.394 60.000 8.42 3.25 0.00 4.46
6092 6281 0.465705 GATGGAGAACATCGCCTGGA 59.534 55.000 0.00 0.00 45.87 3.86
6098 6287 2.317149 GAACATCGCCTGGAGGGAGG 62.317 65.000 0.00 0.00 44.15 4.30
6113 6302 1.657751 GGAGGAGCGTGAATTTGCCC 61.658 60.000 0.00 0.00 0.00 5.36
6120 6309 1.522668 CGTGAATTTGCCCAGTCTGA 58.477 50.000 0.00 0.00 0.00 3.27
6132 6321 3.726607 CCCAGTCTGATTGTAGATGCTC 58.273 50.000 0.00 0.00 0.00 4.26
6134 6323 4.586421 CCCAGTCTGATTGTAGATGCTCTA 59.414 45.833 0.00 0.00 0.00 2.43
6139 6328 4.038042 TCTGATTGTAGATGCTCTAACCCG 59.962 45.833 0.00 0.00 29.58 5.28
6142 6331 3.014304 TGTAGATGCTCTAACCCGTCT 57.986 47.619 0.00 0.00 29.58 4.18
6144 6333 0.461961 AGATGCTCTAACCCGTCTGC 59.538 55.000 0.00 0.00 0.00 4.26
6159 6348 3.499929 CTGCGGACAGTGTCGGTGT 62.500 63.158 26.04 0.00 39.22 4.16
6174 6363 0.323451 GGTGTCCCCTCATTTGTCCC 60.323 60.000 0.00 0.00 0.00 4.46
6176 6365 1.005924 GTGTCCCCTCATTTGTCCCAT 59.994 52.381 0.00 0.00 0.00 4.00
6185 6374 1.750778 CATTTGTCCCATGTGCCCTAC 59.249 52.381 0.00 0.00 0.00 3.18
6187 6376 0.844661 TTGTCCCATGTGCCCTACCT 60.845 55.000 0.00 0.00 0.00 3.08
6188 6377 0.844661 TGTCCCATGTGCCCTACCTT 60.845 55.000 0.00 0.00 0.00 3.50
6202 6391 3.385111 CCCTACCTTGTCACATCCTAGTC 59.615 52.174 0.00 0.00 0.00 2.59
6220 6409 2.746362 AGTCGGTTACGTACAAGGAGAG 59.254 50.000 0.00 0.00 41.85 3.20
6221 6410 2.744202 GTCGGTTACGTACAAGGAGAGA 59.256 50.000 0.00 0.00 41.85 3.10
6222 6411 3.189287 GTCGGTTACGTACAAGGAGAGAA 59.811 47.826 0.00 0.00 41.85 2.87
6223 6412 3.438087 TCGGTTACGTACAAGGAGAGAAG 59.562 47.826 0.00 0.00 41.85 2.85
6224 6413 3.427233 CGGTTACGTACAAGGAGAGAAGG 60.427 52.174 0.00 0.00 34.81 3.46
6225 6414 3.760684 GGTTACGTACAAGGAGAGAAGGA 59.239 47.826 0.00 0.00 0.00 3.36
6226 6415 4.142425 GGTTACGTACAAGGAGAGAAGGAG 60.142 50.000 0.00 0.00 0.00 3.69
6227 6416 3.436577 ACGTACAAGGAGAGAAGGAGA 57.563 47.619 0.00 0.00 0.00 3.71
6228 6417 3.764218 ACGTACAAGGAGAGAAGGAGAA 58.236 45.455 0.00 0.00 0.00 2.87
6229 6418 4.345854 ACGTACAAGGAGAGAAGGAGAAT 58.654 43.478 0.00 0.00 0.00 2.40
6230 6419 4.158764 ACGTACAAGGAGAGAAGGAGAATG 59.841 45.833 0.00 0.00 0.00 2.67
6231 6420 4.158764 CGTACAAGGAGAGAAGGAGAATGT 59.841 45.833 0.00 0.00 0.00 2.71
6232 6421 4.550076 ACAAGGAGAGAAGGAGAATGTG 57.450 45.455 0.00 0.00 0.00 3.21
6233 6422 3.906846 ACAAGGAGAGAAGGAGAATGTGT 59.093 43.478 0.00 0.00 0.00 3.72
6234 6423 4.349342 ACAAGGAGAGAAGGAGAATGTGTT 59.651 41.667 0.00 0.00 0.00 3.32
6235 6424 4.817318 AGGAGAGAAGGAGAATGTGTTC 57.183 45.455 0.00 0.00 34.46 3.18
6237 6426 5.584913 AGGAGAGAAGGAGAATGTGTTCTA 58.415 41.667 0.00 0.00 44.57 2.10
6238 6427 5.656416 AGGAGAGAAGGAGAATGTGTTCTAG 59.344 44.000 0.00 0.00 44.57 2.43
6239 6428 5.654650 GGAGAGAAGGAGAATGTGTTCTAGA 59.345 44.000 0.00 0.00 44.57 2.43
6240 6429 6.405397 GGAGAGAAGGAGAATGTGTTCTAGAC 60.405 46.154 0.00 0.00 44.57 2.59
6241 6430 5.124776 AGAGAAGGAGAATGTGTTCTAGACG 59.875 44.000 0.00 0.00 44.57 4.18
6242 6431 5.010933 AGAAGGAGAATGTGTTCTAGACGA 58.989 41.667 0.00 0.00 44.57 4.20
6243 6432 4.705337 AGGAGAATGTGTTCTAGACGAC 57.295 45.455 0.00 0.00 44.57 4.34
6244 6433 4.337145 AGGAGAATGTGTTCTAGACGACT 58.663 43.478 0.00 0.00 44.57 4.18
6245 6434 4.767928 AGGAGAATGTGTTCTAGACGACTT 59.232 41.667 0.00 0.00 44.57 3.01
6246 6435 5.096849 GGAGAATGTGTTCTAGACGACTTC 58.903 45.833 0.00 0.00 44.57 3.01
6247 6436 5.106078 GGAGAATGTGTTCTAGACGACTTCT 60.106 44.000 0.00 3.89 44.57 2.85
6248 6437 6.093771 GGAGAATGTGTTCTAGACGACTTCTA 59.906 42.308 0.00 0.00 44.57 2.10
6249 6438 7.361885 GGAGAATGTGTTCTAGACGACTTCTAA 60.362 40.741 0.00 0.00 44.57 2.10
6250 6439 8.057536 AGAATGTGTTCTAGACGACTTCTAAT 57.942 34.615 0.00 0.00 42.79 1.73
6251 6440 9.175312 AGAATGTGTTCTAGACGACTTCTAATA 57.825 33.333 0.00 0.00 42.79 0.98
6252 6441 9.953697 GAATGTGTTCTAGACGACTTCTAATAT 57.046 33.333 0.00 0.00 36.32 1.28
6253 6442 9.953697 AATGTGTTCTAGACGACTTCTAATATC 57.046 33.333 0.00 0.00 36.32 1.63
6254 6443 8.734218 TGTGTTCTAGACGACTTCTAATATCT 57.266 34.615 0.00 0.00 36.32 1.98
6255 6444 9.175312 TGTGTTCTAGACGACTTCTAATATCTT 57.825 33.333 0.00 0.00 36.32 2.40
6276 6465 7.812309 TCTTTGAAGTATACGTGATGTCTTG 57.188 36.000 0.00 0.00 0.00 3.02
6277 6466 7.599171 TCTTTGAAGTATACGTGATGTCTTGA 58.401 34.615 0.00 0.00 0.00 3.02
6278 6467 7.755373 TCTTTGAAGTATACGTGATGTCTTGAG 59.245 37.037 0.00 0.00 0.00 3.02
6279 6468 5.891451 TGAAGTATACGTGATGTCTTGAGG 58.109 41.667 0.00 0.00 0.00 3.86
6280 6469 5.650703 TGAAGTATACGTGATGTCTTGAGGA 59.349 40.000 0.00 0.00 0.00 3.71
6281 6470 5.759506 AGTATACGTGATGTCTTGAGGAG 57.240 43.478 0.00 0.00 0.00 3.69
6282 6471 2.941453 TACGTGATGTCTTGAGGAGC 57.059 50.000 0.00 0.00 0.00 4.70
6283 6472 0.247736 ACGTGATGTCTTGAGGAGCC 59.752 55.000 0.00 0.00 0.00 4.70
6284 6473 0.534412 CGTGATGTCTTGAGGAGCCT 59.466 55.000 0.00 0.00 0.00 4.58
6285 6474 1.066573 CGTGATGTCTTGAGGAGCCTT 60.067 52.381 0.00 0.00 0.00 4.35
6286 6475 2.626840 GTGATGTCTTGAGGAGCCTTC 58.373 52.381 0.00 0.00 0.00 3.46
6287 6476 1.556911 TGATGTCTTGAGGAGCCTTCC 59.443 52.381 0.00 0.00 44.39 3.46
6298 6487 2.219458 GGAGCCTTCCTTTTATACGCC 58.781 52.381 0.00 0.00 40.58 5.68
6299 6488 2.420967 GGAGCCTTCCTTTTATACGCCA 60.421 50.000 0.00 0.00 40.58 5.69
6300 6489 3.477530 GAGCCTTCCTTTTATACGCCAT 58.522 45.455 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 8.638873 AGAAACTAATCGTTTTGATCCCTTTTT 58.361 29.630 0.00 0.00 45.48 1.94
8 9 8.178313 AGAAACTAATCGTTTTGATCCCTTTT 57.822 30.769 0.00 0.00 45.48 2.27
9 10 7.761038 AGAAACTAATCGTTTTGATCCCTTT 57.239 32.000 0.00 0.00 45.48 3.11
10 11 7.761038 AAGAAACTAATCGTTTTGATCCCTT 57.239 32.000 0.00 0.00 45.48 3.95
11 12 7.761038 AAAGAAACTAATCGTTTTGATCCCT 57.239 32.000 0.00 0.00 45.48 4.20
12 13 8.727910 ACTAAAGAAACTAATCGTTTTGATCCC 58.272 33.333 0.00 0.00 45.48 3.85
18 19 9.447040 GCTCAAACTAAAGAAACTAATCGTTTT 57.553 29.630 0.00 0.00 45.48 2.43
20 21 8.149973 TGCTCAAACTAAAGAAACTAATCGTT 57.850 30.769 0.00 0.00 37.47 3.85
21 22 7.724305 TGCTCAAACTAAAGAAACTAATCGT 57.276 32.000 0.00 0.00 0.00 3.73
22 23 8.067784 TGTTGCTCAAACTAAAGAAACTAATCG 58.932 33.333 0.00 0.00 39.70 3.34
23 24 9.730420 TTGTTGCTCAAACTAAAGAAACTAATC 57.270 29.630 0.00 0.00 39.70 1.75
27 28 9.516314 GTATTTGTTGCTCAAACTAAAGAAACT 57.484 29.630 9.12 0.00 46.77 2.66
28 29 8.752254 GGTATTTGTTGCTCAAACTAAAGAAAC 58.248 33.333 9.12 0.00 46.77 2.78
29 30 8.691797 AGGTATTTGTTGCTCAAACTAAAGAAA 58.308 29.630 9.12 0.00 46.77 2.52
30 31 8.232913 AGGTATTTGTTGCTCAAACTAAAGAA 57.767 30.769 9.12 0.00 46.77 2.52
31 32 7.817418 AGGTATTTGTTGCTCAAACTAAAGA 57.183 32.000 9.12 0.00 46.77 2.52
32 33 9.612620 CTTAGGTATTTGTTGCTCAAACTAAAG 57.387 33.333 9.12 6.46 46.77 1.85
33 34 8.573035 CCTTAGGTATTTGTTGCTCAAACTAAA 58.427 33.333 9.12 0.00 46.77 1.85
34 35 7.175990 CCCTTAGGTATTTGTTGCTCAAACTAA 59.824 37.037 9.12 10.63 46.77 2.24
35 36 6.657541 CCCTTAGGTATTTGTTGCTCAAACTA 59.342 38.462 9.12 5.31 46.77 2.24
36 37 5.476945 CCCTTAGGTATTTGTTGCTCAAACT 59.523 40.000 9.12 6.04 46.77 2.66
37 38 5.709966 CCCTTAGGTATTTGTTGCTCAAAC 58.290 41.667 9.12 0.00 46.77 2.93
53 54 0.481128 ACAACAACCCCACCCTTAGG 59.519 55.000 0.00 0.00 40.04 2.69
54 55 1.616159 CACAACAACCCCACCCTTAG 58.384 55.000 0.00 0.00 0.00 2.18
55 56 0.186386 CCACAACAACCCCACCCTTA 59.814 55.000 0.00 0.00 0.00 2.69
56 57 1.075600 CCACAACAACCCCACCCTT 60.076 57.895 0.00 0.00 0.00 3.95
57 58 2.321357 ACCACAACAACCCCACCCT 61.321 57.895 0.00 0.00 0.00 4.34
58 59 2.131067 CACCACAACAACCCCACCC 61.131 63.158 0.00 0.00 0.00 4.61
59 60 2.131067 CCACCACAACAACCCCACC 61.131 63.158 0.00 0.00 0.00 4.61
60 61 2.791868 GCCACCACAACAACCCCAC 61.792 63.158 0.00 0.00 0.00 4.61
61 62 2.443016 GCCACCACAACAACCCCA 60.443 61.111 0.00 0.00 0.00 4.96
62 63 3.601685 CGCCACCACAACAACCCC 61.602 66.667 0.00 0.00 0.00 4.95
63 64 4.279043 GCGCCACCACAACAACCC 62.279 66.667 0.00 0.00 0.00 4.11
64 65 4.622456 CGCGCCACCACAACAACC 62.622 66.667 0.00 0.00 0.00 3.77
68 69 4.264638 AAAGCGCGCCACCACAAC 62.265 61.111 30.33 0.00 0.00 3.32
69 70 4.263209 CAAAGCGCGCCACCACAA 62.263 61.111 30.33 0.00 0.00 3.33
78 79 4.705519 CCTTGGCACCAAAGCGCG 62.706 66.667 0.00 0.00 35.33 6.86
79 80 3.273080 CTCCTTGGCACCAAAGCGC 62.273 63.158 0.00 0.00 35.33 5.92
80 81 2.629656 CCTCCTTGGCACCAAAGCG 61.630 63.158 3.29 0.00 35.33 4.68
81 82 1.531602 ACCTCCTTGGCACCAAAGC 60.532 57.895 3.29 0.00 40.22 3.51
82 83 0.468029 ACACCTCCTTGGCACCAAAG 60.468 55.000 3.29 0.00 40.22 2.77
83 84 0.754957 CACACCTCCTTGGCACCAAA 60.755 55.000 3.29 0.00 40.22 3.28
84 85 1.152777 CACACCTCCTTGGCACCAA 60.153 57.895 1.46 1.46 40.22 3.67
85 86 2.515398 CACACCTCCTTGGCACCA 59.485 61.111 0.00 0.00 40.22 4.17
86 87 2.282462 CCACACCTCCTTGGCACC 60.282 66.667 0.00 0.00 40.22 5.01
87 88 2.282462 CCCACACCTCCTTGGCAC 60.282 66.667 0.00 0.00 40.22 5.01
88 89 2.351924 GAACCCACACCTCCTTGGCA 62.352 60.000 0.00 0.00 40.22 4.92
89 90 1.603739 GAACCCACACCTCCTTGGC 60.604 63.158 0.00 0.00 40.22 4.52
90 91 1.302511 CGAACCCACACCTCCTTGG 60.303 63.158 0.00 0.00 42.93 3.61
91 92 0.107831 TTCGAACCCACACCTCCTTG 59.892 55.000 0.00 0.00 0.00 3.61
92 93 1.003233 GATTCGAACCCACACCTCCTT 59.997 52.381 0.00 0.00 0.00 3.36
93 94 0.613777 GATTCGAACCCACACCTCCT 59.386 55.000 0.00 0.00 0.00 3.69
94 95 0.392595 GGATTCGAACCCACACCTCC 60.393 60.000 2.75 0.00 0.00 4.30
95 96 0.392595 GGGATTCGAACCCACACCTC 60.393 60.000 23.09 6.73 46.05 3.85
96 97 1.683441 GGGATTCGAACCCACACCT 59.317 57.895 23.09 0.00 46.05 4.00
97 98 4.313819 GGGATTCGAACCCACACC 57.686 61.111 23.09 11.04 46.05 4.16
102 103 1.094785 CACATGTGGGATTCGAACCC 58.905 55.000 18.51 21.92 46.87 4.11
103 104 0.451783 GCACATGTGGGATTCGAACC 59.548 55.000 26.55 4.00 0.00 3.62
104 105 1.164411 TGCACATGTGGGATTCGAAC 58.836 50.000 26.55 7.59 0.00 3.95
105 106 1.902938 TTGCACATGTGGGATTCGAA 58.097 45.000 26.55 0.00 0.00 3.71
106 107 2.127271 ATTGCACATGTGGGATTCGA 57.873 45.000 26.55 10.07 0.00 3.71
107 108 4.572985 AATATTGCACATGTGGGATTCG 57.427 40.909 26.55 0.01 0.00 3.34
130 131 7.156000 TCTTCACGTCTACCACATGATAAAAA 58.844 34.615 0.00 0.00 0.00 1.94
131 132 6.693466 TCTTCACGTCTACCACATGATAAAA 58.307 36.000 0.00 0.00 0.00 1.52
132 133 6.275494 TCTTCACGTCTACCACATGATAAA 57.725 37.500 0.00 0.00 0.00 1.40
133 134 5.907866 TCTTCACGTCTACCACATGATAA 57.092 39.130 0.00 0.00 0.00 1.75
134 135 5.417894 ACTTCTTCACGTCTACCACATGATA 59.582 40.000 0.00 0.00 0.00 2.15
135 136 4.220821 ACTTCTTCACGTCTACCACATGAT 59.779 41.667 0.00 0.00 0.00 2.45
136 137 3.572682 ACTTCTTCACGTCTACCACATGA 59.427 43.478 0.00 0.00 0.00 3.07
137 138 3.914312 ACTTCTTCACGTCTACCACATG 58.086 45.455 0.00 0.00 0.00 3.21
138 139 3.366070 CGACTTCTTCACGTCTACCACAT 60.366 47.826 0.00 0.00 0.00 3.21
139 140 2.031420 CGACTTCTTCACGTCTACCACA 60.031 50.000 0.00 0.00 0.00 4.17
140 141 2.582687 CGACTTCTTCACGTCTACCAC 58.417 52.381 0.00 0.00 0.00 4.16
141 142 1.068748 GCGACTTCTTCACGTCTACCA 60.069 52.381 0.00 0.00 0.00 3.25
142 143 1.068748 TGCGACTTCTTCACGTCTACC 60.069 52.381 0.00 0.00 0.00 3.18
143 144 2.243407 CTGCGACTTCTTCACGTCTAC 58.757 52.381 0.00 0.00 0.00 2.59
144 145 1.878088 ACTGCGACTTCTTCACGTCTA 59.122 47.619 0.00 0.00 0.00 2.59
145 146 0.669077 ACTGCGACTTCTTCACGTCT 59.331 50.000 0.00 0.00 0.00 4.18
146 147 1.488527 AACTGCGACTTCTTCACGTC 58.511 50.000 0.00 0.00 0.00 4.34
147 148 1.935933 AAACTGCGACTTCTTCACGT 58.064 45.000 0.00 0.00 0.00 4.49
148 149 2.540101 AGAAAACTGCGACTTCTTCACG 59.460 45.455 0.00 0.00 0.00 4.35
149 150 3.555956 TGAGAAAACTGCGACTTCTTCAC 59.444 43.478 0.00 0.00 29.59 3.18
150 151 3.792401 TGAGAAAACTGCGACTTCTTCA 58.208 40.909 0.00 0.00 29.59 3.02
151 152 4.051922 TCTGAGAAAACTGCGACTTCTTC 58.948 43.478 0.00 0.00 29.59 2.87
152 153 4.054671 CTCTGAGAAAACTGCGACTTCTT 58.945 43.478 0.00 0.00 29.59 2.52
153 154 3.553922 CCTCTGAGAAAACTGCGACTTCT 60.554 47.826 6.17 0.00 32.11 2.85
154 155 2.734079 CCTCTGAGAAAACTGCGACTTC 59.266 50.000 6.17 0.00 0.00 3.01
155 156 2.103263 ACCTCTGAGAAAACTGCGACTT 59.897 45.455 6.17 0.00 0.00 3.01
156 157 1.689273 ACCTCTGAGAAAACTGCGACT 59.311 47.619 6.17 0.00 0.00 4.18
157 158 1.795286 CACCTCTGAGAAAACTGCGAC 59.205 52.381 6.17 0.00 0.00 5.19
158 159 1.270305 CCACCTCTGAGAAAACTGCGA 60.270 52.381 6.17 0.00 0.00 5.10
159 160 1.151668 CCACCTCTGAGAAAACTGCG 58.848 55.000 6.17 0.00 0.00 5.18
160 161 1.528129 CCCACCTCTGAGAAAACTGC 58.472 55.000 6.17 0.00 0.00 4.40
161 162 1.528129 GCCCACCTCTGAGAAAACTG 58.472 55.000 6.17 0.00 0.00 3.16
162 163 0.035458 CGCCCACCTCTGAGAAAACT 59.965 55.000 6.17 0.00 0.00 2.66
163 164 1.578206 GCGCCCACCTCTGAGAAAAC 61.578 60.000 6.17 0.00 0.00 2.43
164 165 1.302511 GCGCCCACCTCTGAGAAAA 60.303 57.895 6.17 0.00 0.00 2.29
165 166 2.347490 GCGCCCACCTCTGAGAAA 59.653 61.111 6.17 0.00 0.00 2.52
166 167 4.069232 CGCGCCCACCTCTGAGAA 62.069 66.667 6.17 0.00 0.00 2.87
183 184 1.478622 GCTTCTCTCGCACATCTCGC 61.479 60.000 0.00 0.00 0.00 5.03
184 185 0.179153 TGCTTCTCTCGCACATCTCG 60.179 55.000 0.00 0.00 31.40 4.04
185 186 1.558741 CTGCTTCTCTCGCACATCTC 58.441 55.000 0.00 0.00 33.19 2.75
186 187 0.175302 CCTGCTTCTCTCGCACATCT 59.825 55.000 0.00 0.00 33.19 2.90
187 188 0.108424 ACCTGCTTCTCTCGCACATC 60.108 55.000 0.00 0.00 33.19 3.06
188 189 0.322975 AACCTGCTTCTCTCGCACAT 59.677 50.000 0.00 0.00 33.19 3.21
189 190 0.106708 AAACCTGCTTCTCTCGCACA 59.893 50.000 0.00 0.00 33.19 4.57
190 191 0.793250 GAAACCTGCTTCTCTCGCAC 59.207 55.000 0.00 0.00 33.19 5.34
191 192 0.681733 AGAAACCTGCTTCTCTCGCA 59.318 50.000 0.00 0.00 29.31 5.10
192 193 1.355005 GAGAAACCTGCTTCTCTCGC 58.645 55.000 6.26 0.00 45.30 5.03
193 194 1.623359 CGAGAAACCTGCTTCTCTCG 58.377 55.000 10.62 6.00 46.16 4.04
194 195 1.404851 CCCGAGAAACCTGCTTCTCTC 60.405 57.143 10.62 2.93 46.16 3.20
195 196 0.610687 CCCGAGAAACCTGCTTCTCT 59.389 55.000 10.62 0.00 46.16 3.10
196 197 1.021920 GCCCGAGAAACCTGCTTCTC 61.022 60.000 3.87 3.87 45.30 2.87
197 198 1.003233 GCCCGAGAAACCTGCTTCT 60.003 57.895 0.00 0.00 38.39 2.85
198 199 2.391389 CGCCCGAGAAACCTGCTTC 61.391 63.158 0.00 0.00 0.00 3.86
199 200 2.358737 CGCCCGAGAAACCTGCTT 60.359 61.111 0.00 0.00 0.00 3.91
200 201 3.302347 CTCGCCCGAGAAACCTGCT 62.302 63.158 12.04 0.00 44.53 4.24
201 202 2.815647 CTCGCCCGAGAAACCTGC 60.816 66.667 12.04 0.00 44.53 4.85
202 203 1.446272 GACTCGCCCGAGAAACCTG 60.446 63.158 22.90 0.00 44.53 4.00
203 204 1.606889 AGACTCGCCCGAGAAACCT 60.607 57.895 22.90 11.32 44.53 3.50
204 205 1.446272 CAGACTCGCCCGAGAAACC 60.446 63.158 22.90 9.53 44.53 3.27
205 206 2.095252 GCAGACTCGCCCGAGAAAC 61.095 63.158 22.90 13.33 44.53 2.78
206 207 2.261671 GCAGACTCGCCCGAGAAA 59.738 61.111 22.90 0.00 44.53 2.52
207 208 2.989253 TGCAGACTCGCCCGAGAA 60.989 61.111 22.90 2.06 44.53 2.87
208 209 3.443925 CTGCAGACTCGCCCGAGA 61.444 66.667 22.90 0.67 44.53 4.04
209 210 4.504916 CCTGCAGACTCGCCCGAG 62.505 72.222 17.39 15.46 46.91 4.63
212 213 4.459089 GACCCTGCAGACTCGCCC 62.459 72.222 17.39 0.00 0.00 6.13
213 214 2.527951 AATGACCCTGCAGACTCGCC 62.528 60.000 17.39 0.00 0.00 5.54
214 215 1.078848 AATGACCCTGCAGACTCGC 60.079 57.895 17.39 0.02 0.00 5.03
215 216 0.247460 TGAATGACCCTGCAGACTCG 59.753 55.000 17.39 1.69 0.00 4.18
216 217 1.406614 CCTGAATGACCCTGCAGACTC 60.407 57.143 17.39 9.46 0.00 3.36
217 218 0.617413 CCTGAATGACCCTGCAGACT 59.383 55.000 17.39 0.00 0.00 3.24
218 219 0.615331 TCCTGAATGACCCTGCAGAC 59.385 55.000 17.39 6.93 0.00 3.51
219 220 0.907486 CTCCTGAATGACCCTGCAGA 59.093 55.000 17.39 0.00 0.00 4.26
220 221 0.907486 TCTCCTGAATGACCCTGCAG 59.093 55.000 6.78 6.78 0.00 4.41
221 222 1.361204 TTCTCCTGAATGACCCTGCA 58.639 50.000 0.00 0.00 0.00 4.41
222 223 2.363683 CTTTCTCCTGAATGACCCTGC 58.636 52.381 0.00 0.00 31.39 4.85
223 224 2.363683 GCTTTCTCCTGAATGACCCTG 58.636 52.381 0.00 0.00 31.39 4.45
224 225 1.065854 CGCTTTCTCCTGAATGACCCT 60.066 52.381 0.00 0.00 31.39 4.34
225 226 1.373570 CGCTTTCTCCTGAATGACCC 58.626 55.000 0.00 0.00 31.39 4.46
226 227 1.373570 CCGCTTTCTCCTGAATGACC 58.626 55.000 0.00 0.00 31.39 4.02
227 228 1.373570 CCCGCTTTCTCCTGAATGAC 58.626 55.000 0.00 0.00 31.39 3.06
228 229 0.253044 CCCCGCTTTCTCCTGAATGA 59.747 55.000 0.00 0.00 31.39 2.57
229 230 0.035056 ACCCCGCTTTCTCCTGAATG 60.035 55.000 0.00 0.00 31.56 2.67
230 231 0.253327 GACCCCGCTTTCTCCTGAAT 59.747 55.000 0.00 0.00 31.56 2.57
231 232 1.677552 GACCCCGCTTTCTCCTGAA 59.322 57.895 0.00 0.00 0.00 3.02
232 233 2.646175 CGACCCCGCTTTCTCCTGA 61.646 63.158 0.00 0.00 0.00 3.86
233 234 2.125512 CGACCCCGCTTTCTCCTG 60.126 66.667 0.00 0.00 0.00 3.86
234 235 1.889530 CTTCGACCCCGCTTTCTCCT 61.890 60.000 0.00 0.00 35.37 3.69
235 236 1.448013 CTTCGACCCCGCTTTCTCC 60.448 63.158 0.00 0.00 35.37 3.71
236 237 1.448013 CCTTCGACCCCGCTTTCTC 60.448 63.158 0.00 0.00 35.37 2.87
237 238 1.477685 TTCCTTCGACCCCGCTTTCT 61.478 55.000 0.00 0.00 35.37 2.52
238 239 1.004200 TTCCTTCGACCCCGCTTTC 60.004 57.895 0.00 0.00 35.37 2.62
239 240 1.003718 CTTCCTTCGACCCCGCTTT 60.004 57.895 0.00 0.00 35.37 3.51
240 241 1.889530 CTCTTCCTTCGACCCCGCTT 61.890 60.000 0.00 0.00 35.37 4.68
241 242 2.283676 TCTTCCTTCGACCCCGCT 60.284 61.111 0.00 0.00 35.37 5.52
242 243 2.184579 CTCTTCCTTCGACCCCGC 59.815 66.667 0.00 0.00 35.37 6.13
243 244 2.722201 CCCTCTTCCTTCGACCCCG 61.722 68.421 0.00 0.00 37.07 5.73
244 245 0.691413 ATCCCTCTTCCTTCGACCCC 60.691 60.000 0.00 0.00 0.00 4.95
245 246 0.753867 GATCCCTCTTCCTTCGACCC 59.246 60.000 0.00 0.00 0.00 4.46
246 247 0.386113 CGATCCCTCTTCCTTCGACC 59.614 60.000 0.00 0.00 31.74 4.79
247 248 1.104630 ACGATCCCTCTTCCTTCGAC 58.895 55.000 0.00 0.00 34.15 4.20
248 249 1.103803 CACGATCCCTCTTCCTTCGA 58.896 55.000 0.00 0.00 34.15 3.71
249 250 0.818296 ACACGATCCCTCTTCCTTCG 59.182 55.000 0.00 0.00 35.99 3.79
250 251 1.134670 CCACACGATCCCTCTTCCTTC 60.135 57.143 0.00 0.00 0.00 3.46
251 252 0.905357 CCACACGATCCCTCTTCCTT 59.095 55.000 0.00 0.00 0.00 3.36
252 253 0.252284 ACCACACGATCCCTCTTCCT 60.252 55.000 0.00 0.00 0.00 3.36
253 254 1.136500 GTACCACACGATCCCTCTTCC 59.864 57.143 0.00 0.00 0.00 3.46
254 255 2.100989 AGTACCACACGATCCCTCTTC 58.899 52.381 0.00 0.00 0.00 2.87
255 256 2.233305 AGTACCACACGATCCCTCTT 57.767 50.000 0.00 0.00 0.00 2.85
256 257 2.233305 AAGTACCACACGATCCCTCT 57.767 50.000 0.00 0.00 0.00 3.69
257 258 4.460948 TTAAAGTACCACACGATCCCTC 57.539 45.455 0.00 0.00 0.00 4.30
258 259 4.285260 ACTTTAAAGTACCACACGATCCCT 59.715 41.667 19.26 0.00 37.52 4.20
259 260 4.390909 CACTTTAAAGTACCACACGATCCC 59.609 45.833 20.15 0.00 37.08 3.85
260 261 5.232463 TCACTTTAAAGTACCACACGATCC 58.768 41.667 20.15 0.00 37.08 3.36
261 262 6.774354 TTCACTTTAAAGTACCACACGATC 57.226 37.500 20.15 0.00 37.08 3.69
262 263 6.539464 TGTTTCACTTTAAAGTACCACACGAT 59.461 34.615 20.15 0.00 37.08 3.73
263 264 5.873712 TGTTTCACTTTAAAGTACCACACGA 59.126 36.000 20.15 9.06 37.08 4.35
264 265 6.109320 TGTTTCACTTTAAAGTACCACACG 57.891 37.500 20.15 6.87 37.08 4.49
265 266 8.920509 ATTTGTTTCACTTTAAAGTACCACAC 57.079 30.769 20.15 12.67 37.08 3.82
272 273 9.185680 ACACCTCTATTTGTTTCACTTTAAAGT 57.814 29.630 15.22 15.22 40.60 2.66
273 274 9.450807 CACACCTCTATTTGTTTCACTTTAAAG 57.549 33.333 13.76 13.76 0.00 1.85
274 275 9.179909 TCACACCTCTATTTGTTTCACTTTAAA 57.820 29.630 0.00 0.00 0.00 1.52
275 276 8.617809 GTCACACCTCTATTTGTTTCACTTTAA 58.382 33.333 0.00 0.00 0.00 1.52
276 277 7.771361 TGTCACACCTCTATTTGTTTCACTTTA 59.229 33.333 0.00 0.00 0.00 1.85
277 278 6.601613 TGTCACACCTCTATTTGTTTCACTTT 59.398 34.615 0.00 0.00 0.00 2.66
278 279 6.119536 TGTCACACCTCTATTTGTTTCACTT 58.880 36.000 0.00 0.00 0.00 3.16
279 280 5.680619 TGTCACACCTCTATTTGTTTCACT 58.319 37.500 0.00 0.00 0.00 3.41
280 281 5.527582 ACTGTCACACCTCTATTTGTTTCAC 59.472 40.000 0.00 0.00 0.00 3.18
281 282 5.680619 ACTGTCACACCTCTATTTGTTTCA 58.319 37.500 0.00 0.00 0.00 2.69
282 283 6.619801 AACTGTCACACCTCTATTTGTTTC 57.380 37.500 0.00 0.00 0.00 2.78
283 284 7.257722 CAAAACTGTCACACCTCTATTTGTTT 58.742 34.615 0.00 0.00 0.00 2.83
284 285 6.680378 GCAAAACTGTCACACCTCTATTTGTT 60.680 38.462 0.00 0.00 0.00 2.83
285 286 5.221048 GCAAAACTGTCACACCTCTATTTGT 60.221 40.000 0.00 0.00 0.00 2.83
286 287 5.009010 AGCAAAACTGTCACACCTCTATTTG 59.991 40.000 0.00 0.00 0.00 2.32
287 288 5.133221 AGCAAAACTGTCACACCTCTATTT 58.867 37.500 0.00 0.00 0.00 1.40
288 289 4.718961 AGCAAAACTGTCACACCTCTATT 58.281 39.130 0.00 0.00 0.00 1.73
289 290 4.357918 AGCAAAACTGTCACACCTCTAT 57.642 40.909 0.00 0.00 0.00 1.98
290 291 3.838244 AGCAAAACTGTCACACCTCTA 57.162 42.857 0.00 0.00 0.00 2.43
291 292 2.717639 AGCAAAACTGTCACACCTCT 57.282 45.000 0.00 0.00 0.00 3.69
292 293 6.403636 CCATATAAGCAAAACTGTCACACCTC 60.404 42.308 0.00 0.00 0.00 3.85
293 294 5.415701 CCATATAAGCAAAACTGTCACACCT 59.584 40.000 0.00 0.00 0.00 4.00
294 295 5.640732 CCATATAAGCAAAACTGTCACACC 58.359 41.667 0.00 0.00 0.00 4.16
295 296 5.095490 GCCATATAAGCAAAACTGTCACAC 58.905 41.667 0.00 0.00 0.00 3.82
296 297 4.764308 TGCCATATAAGCAAAACTGTCACA 59.236 37.500 0.00 0.00 37.28 3.58
297 298 5.095490 GTGCCATATAAGCAAAACTGTCAC 58.905 41.667 2.62 0.00 43.02 3.67
298 299 4.764308 TGTGCCATATAAGCAAAACTGTCA 59.236 37.500 2.62 0.00 43.02 3.58
299 300 5.095490 GTGTGCCATATAAGCAAAACTGTC 58.905 41.667 2.62 0.00 43.02 3.51
300 301 4.522405 TGTGTGCCATATAAGCAAAACTGT 59.478 37.500 2.62 0.00 43.02 3.55
301 302 5.058149 TGTGTGCCATATAAGCAAAACTG 57.942 39.130 2.62 0.00 43.02 3.16
302 303 5.185635 ACATGTGTGCCATATAAGCAAAACT 59.814 36.000 0.00 0.00 43.02 2.66
303 304 5.289193 CACATGTGTGCCATATAAGCAAAAC 59.711 40.000 18.03 5.63 43.02 2.43
304 305 5.409211 CACATGTGTGCCATATAAGCAAAA 58.591 37.500 18.03 0.00 43.02 2.44
305 306 4.996344 CACATGTGTGCCATATAAGCAAA 58.004 39.130 18.03 0.00 43.02 3.68
306 307 4.635833 CACATGTGTGCCATATAAGCAA 57.364 40.909 18.03 0.00 43.02 3.91
319 320 4.081406 ACTGTGATATTTGGCACATGTGT 58.919 39.130 26.01 9.30 43.34 3.72
320 321 4.439153 GGACTGTGATATTTGGCACATGTG 60.439 45.833 21.83 21.83 43.34 3.21
321 322 3.696051 GGACTGTGATATTTGGCACATGT 59.304 43.478 0.00 0.00 43.34 3.21
322 323 3.949754 AGGACTGTGATATTTGGCACATG 59.050 43.478 0.00 0.00 43.34 3.21
323 324 4.240881 AGGACTGTGATATTTGGCACAT 57.759 40.909 0.00 0.00 43.34 3.21
324 325 3.719268 AGGACTGTGATATTTGGCACA 57.281 42.857 0.00 0.00 42.25 4.57
325 326 4.458989 TCAAAGGACTGTGATATTTGGCAC 59.541 41.667 0.00 0.00 32.91 5.01
326 327 4.661222 TCAAAGGACTGTGATATTTGGCA 58.339 39.130 0.00 0.00 32.91 4.92
327 328 5.643379 TTCAAAGGACTGTGATATTTGGC 57.357 39.130 0.00 0.00 32.91 4.52
328 329 9.573133 GTTTATTCAAAGGACTGTGATATTTGG 57.427 33.333 0.00 0.00 32.91 3.28
329 330 9.277565 CGTTTATTCAAAGGACTGTGATATTTG 57.722 33.333 0.00 0.00 32.45 2.32
330 331 8.458843 CCGTTTATTCAAAGGACTGTGATATTT 58.541 33.333 0.00 0.00 32.45 1.40
331 332 7.827236 TCCGTTTATTCAAAGGACTGTGATATT 59.173 33.333 0.00 0.00 32.45 1.28
332 333 7.335627 TCCGTTTATTCAAAGGACTGTGATAT 58.664 34.615 0.00 0.00 32.45 1.63
333 334 6.703319 TCCGTTTATTCAAAGGACTGTGATA 58.297 36.000 0.00 0.00 32.45 2.15
334 335 5.556915 TCCGTTTATTCAAAGGACTGTGAT 58.443 37.500 0.00 0.00 32.45 3.06
335 336 4.963373 TCCGTTTATTCAAAGGACTGTGA 58.037 39.130 0.00 0.00 32.45 3.58
336 337 5.643777 AGATCCGTTTATTCAAAGGACTGTG 59.356 40.000 0.00 0.00 33.37 3.66
337 338 5.643777 CAGATCCGTTTATTCAAAGGACTGT 59.356 40.000 0.00 0.00 33.37 3.55
338 339 5.065218 CCAGATCCGTTTATTCAAAGGACTG 59.935 44.000 0.00 0.00 33.37 3.51
339 340 5.045869 TCCAGATCCGTTTATTCAAAGGACT 60.046 40.000 0.00 0.00 33.37 3.85
340 341 5.183228 TCCAGATCCGTTTATTCAAAGGAC 58.817 41.667 0.00 0.00 33.37 3.85
341 342 5.429681 TCCAGATCCGTTTATTCAAAGGA 57.570 39.130 0.00 0.00 32.45 3.36
342 343 6.509418 TTTCCAGATCCGTTTATTCAAAGG 57.491 37.500 0.00 0.00 0.00 3.11
365 366 3.859411 TGTCGCAACCTGAAAGTTTTT 57.141 38.095 0.00 0.00 0.00 1.94
366 367 3.192633 ACTTGTCGCAACCTGAAAGTTTT 59.807 39.130 0.00 0.00 0.00 2.43
367 368 2.752903 ACTTGTCGCAACCTGAAAGTTT 59.247 40.909 0.00 0.00 0.00 2.66
368 369 2.097466 CACTTGTCGCAACCTGAAAGTT 59.903 45.455 0.00 0.00 0.00 2.66
369 370 1.670811 CACTTGTCGCAACCTGAAAGT 59.329 47.619 0.00 0.00 0.00 2.66
370 371 1.939934 TCACTTGTCGCAACCTGAAAG 59.060 47.619 0.00 0.00 0.00 2.62
371 372 1.668751 GTCACTTGTCGCAACCTGAAA 59.331 47.619 0.00 0.00 0.00 2.69
372 373 1.295792 GTCACTTGTCGCAACCTGAA 58.704 50.000 0.00 0.00 0.00 3.02
373 374 0.874175 CGTCACTTGTCGCAACCTGA 60.874 55.000 0.00 0.00 0.00 3.86
374 375 1.564622 CGTCACTTGTCGCAACCTG 59.435 57.895 0.00 0.00 0.00 4.00
375 376 4.027755 CGTCACTTGTCGCAACCT 57.972 55.556 0.00 0.00 0.00 3.50
380 381 1.831389 ACATGTGCGTCACTTGTCGC 61.831 55.000 18.71 12.93 45.26 5.19
381 382 2.225348 ACATGTGCGTCACTTGTCG 58.775 52.632 18.71 0.00 45.26 4.35
384 385 1.154599 GCGACATGTGCGTCACTTG 60.155 57.895 1.15 17.79 42.61 3.16
385 386 1.157257 TTGCGACATGTGCGTCACTT 61.157 50.000 1.15 2.86 35.54 3.16
386 387 1.594021 TTGCGACATGTGCGTCACT 60.594 52.632 1.15 0.00 35.54 3.41
387 388 1.438710 GTTGCGACATGTGCGTCAC 60.439 57.895 1.15 4.65 35.54 3.67
388 389 2.935191 GTTGCGACATGTGCGTCA 59.065 55.556 1.15 6.86 35.54 4.35
389 390 2.202046 CGTTGCGACATGTGCGTC 60.202 61.111 1.15 4.43 34.24 5.19
390 391 2.964925 ACGTTGCGACATGTGCGT 60.965 55.556 1.15 3.12 34.24 5.24
391 392 2.497419 CACGTTGCGACATGTGCG 60.497 61.111 1.15 8.23 34.24 5.34
392 393 2.127270 CCACGTTGCGACATGTGC 60.127 61.111 1.15 8.25 0.00 4.57
393 394 1.502990 TTCCCACGTTGCGACATGTG 61.503 55.000 1.15 5.08 0.00 3.21
394 395 1.227704 TTCCCACGTTGCGACATGT 60.228 52.632 0.00 0.00 0.00 3.21
395 396 1.497278 CTTCCCACGTTGCGACATG 59.503 57.895 4.64 0.00 0.00 3.21
396 397 1.671054 CCTTCCCACGTTGCGACAT 60.671 57.895 4.64 0.00 0.00 3.06
397 398 2.280524 CCTTCCCACGTTGCGACA 60.281 61.111 4.64 0.00 0.00 4.35
398 399 2.280592 ACCTTCCCACGTTGCGAC 60.281 61.111 0.00 0.00 0.00 5.19
399 400 2.280524 CACCTTCCCACGTTGCGA 60.281 61.111 0.00 0.00 0.00 5.10
400 401 2.280524 TCACCTTCCCACGTTGCG 60.281 61.111 0.00 0.00 0.00 4.85
401 402 0.951040 CTCTCACCTTCCCACGTTGC 60.951 60.000 0.00 0.00 0.00 4.17
402 403 0.393077 ACTCTCACCTTCCCACGTTG 59.607 55.000 0.00 0.00 0.00 4.10
403 404 0.393077 CACTCTCACCTTCCCACGTT 59.607 55.000 0.00 0.00 0.00 3.99
404 405 0.469331 TCACTCTCACCTTCCCACGT 60.469 55.000 0.00 0.00 0.00 4.49
405 406 0.038159 GTCACTCTCACCTTCCCACG 60.038 60.000 0.00 0.00 0.00 4.94
406 407 0.321996 GGTCACTCTCACCTTCCCAC 59.678 60.000 0.00 0.00 0.00 4.61
407 408 0.191064 AGGTCACTCTCACCTTCCCA 59.809 55.000 0.00 0.00 41.95 4.37
408 409 3.074788 AGGTCACTCTCACCTTCCC 57.925 57.895 0.00 0.00 41.95 3.97
413 414 4.602340 TCTTTGTAAGGTCACTCTCACC 57.398 45.455 0.00 0.00 0.00 4.02
414 415 6.223852 TCATTCTTTGTAAGGTCACTCTCAC 58.776 40.000 0.00 0.00 0.00 3.51
415 416 6.419484 TCATTCTTTGTAAGGTCACTCTCA 57.581 37.500 0.00 0.00 0.00 3.27
416 417 7.327214 AGATCATTCTTTGTAAGGTCACTCTC 58.673 38.462 0.00 0.00 0.00 3.20
417 418 7.251321 AGATCATTCTTTGTAAGGTCACTCT 57.749 36.000 0.00 0.00 0.00 3.24
418 419 7.913674 AAGATCATTCTTTGTAAGGTCACTC 57.086 36.000 0.00 0.00 39.18 3.51
419 420 9.220767 GTTAAGATCATTCTTTGTAAGGTCACT 57.779 33.333 0.00 0.00 42.29 3.41
420 421 9.220767 AGTTAAGATCATTCTTTGTAAGGTCAC 57.779 33.333 0.00 0.00 42.29 3.67
502 503 7.402071 TCCGAGCCCATATATATTTAAAGGACT 59.598 37.037 0.00 0.00 0.00 3.85
542 543 3.150949 CAGCCTATCGCCCATCCA 58.849 61.111 0.00 0.00 38.78 3.41
603 604 8.264347 GTGTGTATTTATGGGAATTGGGAATTT 58.736 33.333 0.00 0.00 0.00 1.82
706 707 3.862991 GGCGAGGTAGGGAAGGGC 61.863 72.222 0.00 0.00 0.00 5.19
728 729 1.128692 CTTTCGCTCGGTGGAAATGAC 59.871 52.381 0.00 0.00 32.25 3.06
729 730 1.001520 TCTTTCGCTCGGTGGAAATGA 59.998 47.619 0.00 0.00 32.25 2.57
752 753 1.452953 CCACTGGCCTCTCGCGTATA 61.453 60.000 5.77 0.00 38.94 1.47
754 755 3.449227 CCACTGGCCTCTCGCGTA 61.449 66.667 5.77 0.00 38.94 4.42
842 865 4.101077 AGGAGGGGAGGCCAGAGG 62.101 72.222 5.01 0.00 0.00 3.69
844 867 4.095400 GGAGGAGGGGAGGCCAGA 62.095 72.222 5.01 0.00 0.00 3.86
852 875 4.862823 GGGGAGACGGAGGAGGGG 62.863 77.778 0.00 0.00 0.00 4.79
893 916 1.652012 GAGGACGAGAGGCGAGATG 59.348 63.158 0.00 0.00 43.44 2.90
894 917 1.527380 GGAGGACGAGAGGCGAGAT 60.527 63.158 0.00 0.00 43.44 2.75
895 918 2.124653 GGAGGACGAGAGGCGAGA 60.125 66.667 0.00 0.00 43.44 4.04
896 919 2.124487 AGGAGGACGAGAGGCGAG 60.124 66.667 0.00 0.00 43.44 5.03
921 950 8.345724 AGAATGAATGGATGTATTAGATTGGC 57.654 34.615 0.00 0.00 0.00 4.52
993 1022 2.715336 CCTCTCATCCCCCATTTCAGAT 59.285 50.000 0.00 0.00 0.00 2.90
1017 1046 1.478105 GCATCAATCTCCATGGCCTCA 60.478 52.381 6.96 0.00 0.00 3.86
1065 1094 4.011517 TTGAAGCCGTCCGGGACC 62.012 66.667 21.06 8.39 38.47 4.46
1119 1148 7.609532 GGGATCTAGGATGGAATAAATCACTTG 59.390 40.741 0.00 0.00 0.00 3.16
1166 1195 6.731467 TCTACCTCCCATTTCAGCTTATTTT 58.269 36.000 0.00 0.00 0.00 1.82
1207 1237 5.766702 TCTGGTATTTTGTAACTAACGCG 57.233 39.130 3.53 3.53 0.00 6.01
1267 1297 5.509501 CCACACAACTGGAAAATAAGTGCAT 60.510 40.000 0.00 0.00 32.30 3.96
1272 1302 9.573133 GAAATATCCACACAACTGGAAAATAAG 57.427 33.333 0.00 0.00 43.79 1.73
1275 1305 7.537596 TGAAATATCCACACAACTGGAAAAT 57.462 32.000 0.00 0.00 43.79 1.82
1349 1382 8.349983 TGTTTAATAACCTTGACTTTGAGCTTC 58.650 33.333 0.00 0.00 33.15 3.86
1389 1422 3.388676 TCACGGACTGGGTTTCTCTTTTA 59.611 43.478 0.00 0.00 0.00 1.52
1407 1441 1.945387 AGTATGCCAATCAGCTCACG 58.055 50.000 0.00 0.00 0.00 4.35
1419 1453 4.142447 TGTCTACAGTTCGAGAAGTATGCC 60.142 45.833 0.00 0.00 0.00 4.40
1446 1480 4.933400 GGTTATTAAACAAGAGCAGACCGA 59.067 41.667 0.00 0.00 37.34 4.69
1452 1486 7.657336 CCTTTGAAGGTTATTAAACAAGAGCA 58.343 34.615 1.49 0.00 41.41 4.26
1485 1520 5.345202 GCATCTTTCAGCATTTGAAGAGTTG 59.655 40.000 0.00 0.00 46.01 3.16
1518 1553 3.368739 GGTGGCCTTCCAAATGAGAATTG 60.369 47.826 3.32 0.00 45.53 2.32
1544 1579 5.805486 TCTTCGTAGACCAAAAGATCAATCG 59.195 40.000 0.00 0.00 34.32 3.34
1620 1655 4.314522 TGCCCTGTTTCCTATCAAATGA 57.685 40.909 0.00 0.00 0.00 2.57
1631 1666 1.239347 GTCTGGTCTTGCCCTGTTTC 58.761 55.000 0.00 0.00 36.04 2.78
1661 1702 8.697507 AAATAATTGTCACTGGAAGAAAGAGT 57.302 30.769 0.00 0.00 37.43 3.24
1664 1705 9.329913 CGTTAAATAATTGTCACTGGAAGAAAG 57.670 33.333 0.00 0.00 37.43 2.62
1665 1706 7.806014 GCGTTAAATAATTGTCACTGGAAGAAA 59.194 33.333 0.00 0.00 37.43 2.52
1666 1707 7.041030 TGCGTTAAATAATTGTCACTGGAAGAA 60.041 33.333 0.00 0.00 37.43 2.52
1698 1739 7.095187 GGCATAAGGACATAACAATAGCAGTAC 60.095 40.741 0.00 0.00 0.00 2.73
1701 1742 6.000219 AGGCATAAGGACATAACAATAGCAG 59.000 40.000 0.00 0.00 0.00 4.24
1961 2006 3.127589 TCACATACCATTTCCGTATGCG 58.872 45.455 7.66 0.00 44.55 4.73
2040 2085 5.112220 TGCTTTGCATCTACAGAAAACAG 57.888 39.130 0.00 0.00 31.71 3.16
2152 2197 0.321021 AGTCTCCAGTTCAGCTGCAG 59.679 55.000 10.11 10.11 43.71 4.41
2486 2531 7.346698 CAGATATATCCTGGGAGTATGGACAAT 59.653 40.741 9.18 0.00 32.16 2.71
2607 2652 7.168135 GCATAACAAAATAACATGCCTCTAAGC 59.832 37.037 0.00 0.00 36.78 3.09
2626 2671 6.293190 GCAGTGTGTAAAGTAGTTGCATAACA 60.293 38.462 0.00 0.00 39.30 2.41
2647 2692 4.457466 TCATAGCATCATGTGAATGCAGT 58.543 39.130 17.31 0.00 43.25 4.40
2680 2725 6.551385 AAGATTCTGCAACTCAGTTAAGTG 57.449 37.500 3.73 3.73 43.32 3.16
2682 2727 8.778358 AGTTAAAGATTCTGCAACTCAGTTAAG 58.222 33.333 0.00 0.00 43.32 1.85
2709 2754 4.893424 TTACAGTGAAGCAAACCAAGAC 57.107 40.909 0.00 0.00 0.00 3.01
2916 2962 4.340666 TGCAGACCTTTGTTCATTGCTTAA 59.659 37.500 0.00 0.00 0.00 1.85
2976 3022 6.890268 AGGGGTTTCTGGAGTTATGAATTAAC 59.110 38.462 0.00 0.00 40.50 2.01
3026 3072 6.408206 CCACCCTAAGAAAGAGTAATACAGGG 60.408 46.154 6.64 6.64 44.80 4.45
3139 3185 9.755064 GTACATCACAATTCATACTAACACAAC 57.245 33.333 0.00 0.00 0.00 3.32
3430 3511 4.286707 TGGAGGATCGTCTATTTCCTTGA 58.713 43.478 14.65 0.00 39.98 3.02
3598 3698 6.016860 CACAACATCCTGATGAAAACTCAAGA 60.017 38.462 13.81 0.00 41.20 3.02
3795 3930 2.202388 CCTTGCTGCGAACATGCG 60.202 61.111 0.00 0.00 37.81 4.73
3805 3940 9.252962 GAAAATACATCAATATTTCCCTTGCTG 57.747 33.333 0.00 0.00 34.37 4.41
4039 4181 8.891671 ACATTTTAAAAGTGTGCATCTTTCAT 57.108 26.923 16.30 7.94 34.59 2.57
4125 4267 9.663904 GAGCGCAGTTTTTATAATCAAATCATA 57.336 29.630 11.47 0.00 0.00 2.15
4146 4293 3.002348 ACAGTTGTACAAAGAAAGAGCGC 59.998 43.478 10.51 0.00 0.00 5.92
4149 4296 7.539712 TTCAGACAGTTGTACAAAGAAAGAG 57.460 36.000 10.51 0.00 0.00 2.85
4194 4341 8.687824 AAACAATGAAACAACTGTTAGAAGTG 57.312 30.769 0.00 0.00 37.25 3.16
4212 4359 1.606313 ACGCCCTGGGGAAACAATG 60.606 57.895 16.03 0.00 37.50 2.82
4470 4632 2.510613 CACCTTAACACAAACCCGGAT 58.489 47.619 0.73 0.00 0.00 4.18
4483 4645 6.349280 GCAAGTTCTACAATGATGCACCTTAA 60.349 38.462 0.00 0.00 32.80 1.85
4489 4651 5.450592 TTTGCAAGTTCTACAATGATGCA 57.549 34.783 0.00 0.00 40.22 3.96
4494 4656 7.310664 AGATGTCATTTGCAAGTTCTACAATG 58.689 34.615 0.00 0.00 0.00 2.82
4515 4679 3.319405 AGGCTGTATGGTACGAGAAGATG 59.681 47.826 0.00 0.00 0.00 2.90
4516 4680 3.567397 AGGCTGTATGGTACGAGAAGAT 58.433 45.455 0.00 0.00 0.00 2.40
4517 4681 3.014304 AGGCTGTATGGTACGAGAAGA 57.986 47.619 0.00 0.00 0.00 2.87
4518 4682 5.455056 AATAGGCTGTATGGTACGAGAAG 57.545 43.478 0.00 0.00 0.00 2.85
4519 4683 5.864418 AAATAGGCTGTATGGTACGAGAA 57.136 39.130 0.00 0.00 0.00 2.87
5031 5195 1.263356 TGACTCGGGACAAACCTAGG 58.737 55.000 7.41 7.41 38.98 3.02
5077 5241 9.599866 TGTTGTAGATGTTGGTATAATTCTGAG 57.400 33.333 0.00 0.00 0.00 3.35
5085 5249 8.871629 AATTTGGTGTTGTAGATGTTGGTATA 57.128 30.769 0.00 0.00 0.00 1.47
5227 5392 4.380843 TCCAGTTCCTCCTGCAAAATTA 57.619 40.909 0.00 0.00 0.00 1.40
5417 5587 0.160182 GAACAGTTACACGTTCGCCG 59.840 55.000 2.75 0.00 44.03 6.46
5664 5852 6.149070 AGTCAAAGACCTCATGGCACATATG 61.149 44.000 0.00 0.00 36.67 1.78
5670 5858 2.957402 AAGTCAAAGACCTCATGGCA 57.043 45.000 0.00 0.00 36.63 4.92
5691 5879 1.261480 AACACGAGCATCCTCTGTCT 58.739 50.000 0.00 0.00 35.90 3.41
5701 5889 5.933187 TGCTCTATTTTAAAACACGAGCA 57.067 34.783 28.48 28.48 46.86 4.26
5707 5895 9.515226 AGGTTGTAGATGCTCTATTTTAAAACA 57.485 29.630 1.97 0.00 30.76 2.83
5733 5921 0.699577 TGTTTGGGGAGGAAGGGTCA 60.700 55.000 0.00 0.00 0.00 4.02
5754 5942 4.380444 CCAATTTTGTGACTGGGTTATCCG 60.380 45.833 0.00 0.00 38.76 4.18
5755 5943 4.526650 ACCAATTTTGTGACTGGGTTATCC 59.473 41.667 0.00 0.00 32.94 2.59
5777 5965 5.261661 GCTTTGAATGTCTGATTCGATGAC 58.738 41.667 0.00 0.00 0.00 3.06
5783 5971 3.428589 GGCTGGCTTTGAATGTCTGATTC 60.429 47.826 0.00 0.00 0.00 2.52
5792 5980 1.880819 CGCTTGGGCTGGCTTTGAAT 61.881 55.000 0.00 0.00 36.09 2.57
5835 6023 3.454082 ACTTGGTCAATTTGGAGGCAAAA 59.546 39.130 0.00 0.00 0.00 2.44
5866 6054 1.269448 GCACGAGAAAAGGGCAATCAA 59.731 47.619 0.00 0.00 38.06 2.57
5867 6055 0.881118 GCACGAGAAAAGGGCAATCA 59.119 50.000 0.00 0.00 38.06 2.57
5868 6056 0.171231 GGCACGAGAAAAGGGCAATC 59.829 55.000 0.00 0.00 40.38 2.67
5869 6057 0.251341 AGGCACGAGAAAAGGGCAAT 60.251 50.000 0.00 0.00 40.38 3.56
5870 6058 1.150536 AGGCACGAGAAAAGGGCAA 59.849 52.632 0.00 0.00 40.38 4.52
5888 6076 1.891933 TATGCATGGAAGGGAGGACA 58.108 50.000 10.16 0.00 0.00 4.02
5914 6103 1.750682 GCAAAGTTGGAGGTGGACACT 60.751 52.381 2.13 0.00 0.00 3.55
5916 6105 0.550914 AGCAAAGTTGGAGGTGGACA 59.449 50.000 0.00 0.00 0.00 4.02
5938 6127 5.230942 AGACAAGGACGATAAGACAAACAG 58.769 41.667 0.00 0.00 0.00 3.16
5946 6135 5.181433 TCGGATGATAGACAAGGACGATAAG 59.819 44.000 0.00 0.00 0.00 1.73
5947 6136 5.067954 TCGGATGATAGACAAGGACGATAA 58.932 41.667 0.00 0.00 0.00 1.75
5948 6137 4.648651 TCGGATGATAGACAAGGACGATA 58.351 43.478 0.00 0.00 0.00 2.92
5949 6138 3.487372 TCGGATGATAGACAAGGACGAT 58.513 45.455 0.00 0.00 0.00 3.73
5963 6152 6.998074 ACATCTAATTTGGCTAAATCGGATGA 59.002 34.615 32.06 18.83 41.41 2.92
5980 6169 5.163437 GGGGTACTTGACTTCGACATCTAAT 60.163 44.000 0.00 0.00 0.00 1.73
5992 6181 0.549413 GGGGGAAGGGGTACTTGACT 60.549 60.000 0.00 0.00 40.21 3.41
6028 6217 1.738350 CCATGAAGTCAGCTGAAGCAG 59.262 52.381 20.19 6.58 45.16 4.24
6030 6219 1.093159 CCCATGAAGTCAGCTGAAGC 58.907 55.000 20.19 11.22 42.49 3.86
6052 6241 2.118313 TGCAAGTGATGATGGTCAGG 57.882 50.000 0.00 0.00 0.00 3.86
6053 6242 3.340928 TCTTGCAAGTGATGATGGTCAG 58.659 45.455 25.19 0.00 0.00 3.51
6088 6277 1.333636 ATTCACGCTCCTCCCTCCAG 61.334 60.000 0.00 0.00 0.00 3.86
6092 6281 0.678048 GCAAATTCACGCTCCTCCCT 60.678 55.000 0.00 0.00 0.00 4.20
6098 6287 0.169009 GACTGGGCAAATTCACGCTC 59.831 55.000 0.00 0.00 0.00 5.03
6103 6292 3.499338 ACAATCAGACTGGGCAAATTCA 58.501 40.909 1.81 0.00 0.00 2.57
6139 6328 2.430921 CCGACACTGTCCGCAGAC 60.431 66.667 3.50 0.00 45.28 3.51
6142 6331 3.493830 GACACCGACACTGTCCGCA 62.494 63.158 3.50 0.00 33.23 5.69
6144 6333 2.049433 GGACACCGACACTGTCCG 60.049 66.667 3.50 0.00 46.38 4.79
6174 6363 1.271325 TGTGACAAGGTAGGGCACATG 60.271 52.381 0.00 0.00 34.85 3.21
6176 6365 1.003118 GATGTGACAAGGTAGGGCACA 59.997 52.381 3.27 3.27 42.79 4.57
6185 6374 1.825474 ACCGACTAGGATGTGACAAGG 59.175 52.381 0.00 0.00 45.00 3.61
6187 6376 3.119743 CGTAACCGACTAGGATGTGACAA 60.120 47.826 0.00 0.00 45.00 3.18
6188 6377 2.421073 CGTAACCGACTAGGATGTGACA 59.579 50.000 0.00 0.00 45.00 3.58
6202 6391 3.427233 CCTTCTCTCCTTGTACGTAACCG 60.427 52.174 0.00 0.00 40.83 4.44
6220 6409 5.096849 GTCGTCTAGAACACATTCTCCTTC 58.903 45.833 0.00 0.00 41.63 3.46
6221 6410 4.767928 AGTCGTCTAGAACACATTCTCCTT 59.232 41.667 0.00 0.00 41.63 3.36
6222 6411 4.337145 AGTCGTCTAGAACACATTCTCCT 58.663 43.478 0.00 0.00 41.63 3.69
6223 6412 4.705337 AGTCGTCTAGAACACATTCTCC 57.295 45.455 0.00 0.00 41.63 3.71
6224 6413 5.945155 AGAAGTCGTCTAGAACACATTCTC 58.055 41.667 0.00 0.00 41.63 2.87
6226 6415 9.953697 ATATTAGAAGTCGTCTAGAACACATTC 57.046 33.333 0.00 0.00 40.04 2.67
6227 6416 9.953697 GATATTAGAAGTCGTCTAGAACACATT 57.046 33.333 0.00 0.00 40.04 2.71
6228 6417 9.344772 AGATATTAGAAGTCGTCTAGAACACAT 57.655 33.333 0.00 0.00 40.04 3.21
6229 6418 8.734218 AGATATTAGAAGTCGTCTAGAACACA 57.266 34.615 0.00 0.00 40.04 3.72
6250 6439 9.516314 CAAGACATCACGTATACTTCAAAGATA 57.484 33.333 0.56 0.00 0.00 1.98
6251 6440 8.251026 TCAAGACATCACGTATACTTCAAAGAT 58.749 33.333 0.56 0.00 0.00 2.40
6252 6441 7.599171 TCAAGACATCACGTATACTTCAAAGA 58.401 34.615 0.56 0.00 0.00 2.52
6253 6442 7.009631 CCTCAAGACATCACGTATACTTCAAAG 59.990 40.741 0.56 0.00 0.00 2.77
6254 6443 6.811665 CCTCAAGACATCACGTATACTTCAAA 59.188 38.462 0.56 0.00 0.00 2.69
6255 6444 6.152154 TCCTCAAGACATCACGTATACTTCAA 59.848 38.462 0.56 0.00 0.00 2.69
6256 6445 5.650703 TCCTCAAGACATCACGTATACTTCA 59.349 40.000 0.56 0.00 0.00 3.02
6257 6446 6.132791 TCCTCAAGACATCACGTATACTTC 57.867 41.667 0.56 0.00 0.00 3.01
6258 6447 5.450688 GCTCCTCAAGACATCACGTATACTT 60.451 44.000 0.56 0.00 0.00 2.24
6259 6448 4.036971 GCTCCTCAAGACATCACGTATACT 59.963 45.833 0.56 0.00 0.00 2.12
6260 6449 4.291783 GCTCCTCAAGACATCACGTATAC 58.708 47.826 0.00 0.00 0.00 1.47
6261 6450 3.318275 GGCTCCTCAAGACATCACGTATA 59.682 47.826 0.00 0.00 30.88 1.47
6262 6451 2.101582 GGCTCCTCAAGACATCACGTAT 59.898 50.000 0.00 0.00 30.88 3.06
6263 6452 1.476891 GGCTCCTCAAGACATCACGTA 59.523 52.381 0.00 0.00 30.88 3.57
6264 6453 0.247736 GGCTCCTCAAGACATCACGT 59.752 55.000 0.00 0.00 30.88 4.49
6265 6454 0.534412 AGGCTCCTCAAGACATCACG 59.466 55.000 0.00 0.00 34.25 4.35
6266 6455 2.626840 GAAGGCTCCTCAAGACATCAC 58.373 52.381 0.00 0.00 34.25 3.06
6267 6456 1.556911 GGAAGGCTCCTCAAGACATCA 59.443 52.381 0.00 0.00 38.88 3.07
6268 6457 2.323968 GGAAGGCTCCTCAAGACATC 57.676 55.000 0.00 0.00 38.88 3.06
6278 6467 2.219458 GGCGTATAAAAGGAAGGCTCC 58.781 52.381 0.00 0.00 42.81 4.70
6279 6468 2.914059 TGGCGTATAAAAGGAAGGCTC 58.086 47.619 0.00 0.00 0.00 4.70
6280 6469 3.577805 ATGGCGTATAAAAGGAAGGCT 57.422 42.857 0.00 0.00 0.00 4.58



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.