Multiple sequence alignment - TraesCS1A01G223500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G223500 chr1A 100.000 3116 0 0 1 3116 393998150 394001265 0.000000e+00 5755.0
1 TraesCS1A01G223500 chr1A 77.594 906 184 15 1011 1906 394120847 394121743 5.920000e-147 531.0
2 TraesCS1A01G223500 chr1B 88.316 2037 199 20 655 2666 423921760 423923782 0.000000e+00 2407.0
3 TraesCS1A01G223500 chr1B 90.307 423 41 0 125 547 423920920 423921342 3.510000e-154 555.0
4 TraesCS1A01G223500 chr1B 93.333 60 2 1 590 649 423921418 423921475 1.540000e-13 87.9
5 TraesCS1A01G223500 chr1D 94.356 815 41 2 644 1456 313662306 313663117 0.000000e+00 1245.0
6 TraesCS1A01G223500 chr1D 88.843 977 85 14 1440 2400 313663132 313664100 0.000000e+00 1179.0
7 TraesCS1A01G223500 chr1D 93.568 653 30 7 1 647 313661579 313662225 0.000000e+00 963.0
8 TraesCS1A01G223500 chr6D 78.546 1128 217 18 1000 2116 432931431 432930318 0.000000e+00 719.0
9 TraesCS1A01G223500 chr2A 77.659 1119 220 19 1001 2109 22939200 22938102 0.000000e+00 654.0
10 TraesCS1A01G223500 chr2A 77.520 1121 218 22 998 2106 22619363 22620461 0.000000e+00 643.0
11 TraesCS1A01G223500 chr2A 77.431 1121 219 22 998 2106 22651745 22652843 3.390000e-179 638.0
12 TraesCS1A01G223500 chrUn 77.480 1119 222 19 1001 2109 146913552 146912454 0.000000e+00 643.0
13 TraesCS1A01G223500 chrUn 77.480 1119 222 19 998 2106 210799051 210800149 0.000000e+00 643.0
14 TraesCS1A01G223500 chrUn 82.173 589 105 0 1518 2106 335750032 335750620 9.970000e-140 507.0
15 TraesCS1A01G223500 chr7B 76.034 1160 256 19 991 2139 653800229 653801377 1.610000e-162 582.0
16 TraesCS1A01G223500 chr2D 100.000 29 0 0 560 588 498732143 498732115 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G223500 chr1A 393998150 394001265 3115 False 5755.000000 5755 100.000000 1 3116 1 chr1A.!!$F1 3115
1 TraesCS1A01G223500 chr1A 394120847 394121743 896 False 531.000000 531 77.594000 1011 1906 1 chr1A.!!$F2 895
2 TraesCS1A01G223500 chr1B 423920920 423923782 2862 False 1016.633333 2407 90.652000 125 2666 3 chr1B.!!$F1 2541
3 TraesCS1A01G223500 chr1D 313661579 313664100 2521 False 1129.000000 1245 92.255667 1 2400 3 chr1D.!!$F1 2399
4 TraesCS1A01G223500 chr6D 432930318 432931431 1113 True 719.000000 719 78.546000 1000 2116 1 chr6D.!!$R1 1116
5 TraesCS1A01G223500 chr2A 22938102 22939200 1098 True 654.000000 654 77.659000 1001 2109 1 chr2A.!!$R1 1108
6 TraesCS1A01G223500 chr2A 22619363 22620461 1098 False 643.000000 643 77.520000 998 2106 1 chr2A.!!$F1 1108
7 TraesCS1A01G223500 chr2A 22651745 22652843 1098 False 638.000000 638 77.431000 998 2106 1 chr2A.!!$F2 1108
8 TraesCS1A01G223500 chrUn 146912454 146913552 1098 True 643.000000 643 77.480000 1001 2109 1 chrUn.!!$R1 1108
9 TraesCS1A01G223500 chrUn 210799051 210800149 1098 False 643.000000 643 77.480000 998 2106 1 chrUn.!!$F1 1108
10 TraesCS1A01G223500 chrUn 335750032 335750620 588 False 507.000000 507 82.173000 1518 2106 1 chrUn.!!$F2 588
11 TraesCS1A01G223500 chr7B 653800229 653801377 1148 False 582.000000 582 76.034000 991 2139 1 chr7B.!!$F1 1148

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
713 1122 1.129058 AAACAGGGGTCGTTCTCACT 58.871 50.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2485 2948 0.03563 CAGGAGAAGGTGCCAAGGAG 60.036 60.0 0.0 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 6.770785 GGCAATTCTGATACCCAAATAGTGTA 59.229 38.462 0.00 0.00 0.00 2.90
51 52 5.667466 ACCCAAATAGTGTACCTATGAACG 58.333 41.667 5.08 0.00 36.47 3.95
324 329 1.304282 GGCCTTCATCCCTGCAAGA 59.696 57.895 0.00 0.00 34.07 3.02
409 414 9.797642 TCATCAAGTAGCATAAATAATCCACAT 57.202 29.630 0.00 0.00 0.00 3.21
413 418 9.888878 CAAGTAGCATAAATAATCCACATTGAG 57.111 33.333 0.00 0.00 0.00 3.02
497 502 5.105146 TCACAACAAAGGCCACTTTTACAAT 60.105 36.000 5.01 0.00 44.26 2.71
687 1096 4.416620 GGAGATACTGAAGACGTGAACTG 58.583 47.826 0.00 0.00 0.00 3.16
704 1113 1.376609 CTGCGGCATAAACAGGGGTC 61.377 60.000 1.75 0.00 0.00 4.46
713 1122 1.129058 AAACAGGGGTCGTTCTCACT 58.871 50.000 0.00 0.00 0.00 3.41
724 1133 3.182572 GTCGTTCTCACTGTTACAGCAAG 59.817 47.826 12.80 9.96 34.37 4.01
813 1222 1.460255 CAGGAGCCCCTTTCCACAA 59.540 57.895 0.00 0.00 42.02 3.33
823 1232 3.568430 CCCCTTTCCACAAAGTACAACTC 59.432 47.826 0.00 0.00 37.87 3.01
988 1399 3.192212 GGAAGCAATTTGGAAGAGGACAG 59.808 47.826 0.00 0.00 0.00 3.51
1101 1515 3.181464 TGAACGGTGACTTGTCAATGGTA 60.181 43.478 4.93 0.00 0.00 3.25
1123 1537 1.002069 AAGGCATGAGGGTTGGATGA 58.998 50.000 0.00 0.00 0.00 2.92
1158 1572 0.391228 TGTACAAGGACGCTGCTGAA 59.609 50.000 0.00 0.00 0.00 3.02
1183 1597 2.545946 GCGCAGAGGTTTGAGATATTCC 59.454 50.000 0.30 0.00 0.00 3.01
1225 1639 0.589223 GTCATTCAACGCCGGAAACA 59.411 50.000 5.05 0.00 0.00 2.83
1257 1671 0.592637 TCAGCATCAACCAGTTTGCG 59.407 50.000 2.46 0.00 40.00 4.85
1457 1874 8.261522 TGGTAAGTACATTTATGCTACATGTGA 58.738 33.333 9.11 0.00 33.19 3.58
1510 1964 8.886719 ACATATTAGAATGTGTGTGATTGACTG 58.113 33.333 4.09 0.00 38.97 3.51
1512 1966 2.481568 AGAATGTGTGTGATTGACTGCG 59.518 45.455 0.00 0.00 0.00 5.18
1513 1967 2.168326 ATGTGTGTGATTGACTGCGA 57.832 45.000 0.00 0.00 0.00 5.10
1515 1969 1.202521 TGTGTGTGATTGACTGCGACT 60.203 47.619 0.00 0.00 0.00 4.18
1516 1970 1.193203 GTGTGTGATTGACTGCGACTG 59.807 52.381 0.00 0.00 0.00 3.51
1608 2067 0.174389 GCAATCTGGTCTCGCTCTCA 59.826 55.000 0.00 0.00 0.00 3.27
1863 2322 1.821759 CCAACCCGTGTCAGTTGCA 60.822 57.895 0.00 0.00 41.61 4.08
1899 2358 6.091441 GCGATATGACATTCCAATTCTACTCC 59.909 42.308 0.00 0.00 0.00 3.85
1902 2361 2.872858 GACATTCCAATTCTACTCCGGC 59.127 50.000 0.00 0.00 0.00 6.13
1950 2409 2.624364 TGATTTGGATCATGGGATTGCG 59.376 45.455 0.00 0.00 37.37 4.85
1979 2438 4.333649 CGGTTATGGAACTACTAGTGACGA 59.666 45.833 5.39 0.00 35.74 4.20
1995 2454 8.742777 ACTAGTGACGATACAAAGTATTGGTTA 58.257 33.333 0.00 0.00 41.01 2.85
2019 2478 2.380064 AGAATTCTTGGGGCACAACA 57.620 45.000 0.00 0.00 34.76 3.33
2126 2585 3.275143 CCACGGCATAGTTAAACCATCA 58.725 45.455 0.00 0.00 0.00 3.07
2144 2603 5.045215 CCATCAAATGCCACATATTCACAC 58.955 41.667 0.00 0.00 0.00 3.82
2146 2605 5.313520 TCAAATGCCACATATTCACACAG 57.686 39.130 0.00 0.00 0.00 3.66
2148 2607 5.653330 TCAAATGCCACATATTCACACAGAT 59.347 36.000 0.00 0.00 0.00 2.90
2150 2609 7.503230 TCAAATGCCACATATTCACACAGATAT 59.497 33.333 0.00 0.00 0.00 1.63
2151 2610 6.812879 ATGCCACATATTCACACAGATATG 57.187 37.500 0.00 0.00 34.23 1.78
2152 2611 5.927819 TGCCACATATTCACACAGATATGA 58.072 37.500 9.58 0.00 32.83 2.15
2153 2612 6.536447 TGCCACATATTCACACAGATATGAT 58.464 36.000 9.58 0.00 32.83 2.45
2154 2613 7.678837 TGCCACATATTCACACAGATATGATA 58.321 34.615 9.58 0.00 32.83 2.15
2155 2614 8.323567 TGCCACATATTCACACAGATATGATAT 58.676 33.333 9.58 0.00 32.83 1.63
2184 2645 8.743085 AAATACATGCATGTCTCTTGTTCTAT 57.257 30.769 34.54 16.06 41.97 1.98
2185 2646 7.959689 ATACATGCATGTCTCTTGTTCTATC 57.040 36.000 34.54 0.00 41.97 2.08
2193 2654 7.863375 GCATGTCTCTTGTTCTATCGTAGTATT 59.137 37.037 0.00 0.00 0.00 1.89
2196 2657 9.387257 TGTCTCTTGTTCTATCGTAGTATTACA 57.613 33.333 0.00 0.00 0.00 2.41
2197 2658 9.866936 GTCTCTTGTTCTATCGTAGTATTACAG 57.133 37.037 0.00 0.00 0.00 2.74
2284 2747 4.651503 ACCCTGTGTGTAATATCCTGAGAG 59.348 45.833 0.00 0.00 0.00 3.20
2287 2750 6.042552 CCCTGTGTGTAATATCCTGAGAGATT 59.957 42.308 0.00 0.00 37.65 2.40
2288 2751 7.233553 CCCTGTGTGTAATATCCTGAGAGATTA 59.766 40.741 0.00 0.00 35.57 1.75
2318 2781 8.658609 CAAATATAAAACACATTGCAAGAAGGG 58.341 33.333 4.94 0.78 0.00 3.95
2328 2791 2.564771 TGCAAGAAGGGCGATATGAAG 58.435 47.619 0.00 0.00 0.00 3.02
2337 2800 4.384056 AGGGCGATATGAAGAGTTCAATG 58.616 43.478 0.00 0.00 43.95 2.82
2344 2807 6.423302 CGATATGAAGAGTTCAATGGAAGGAG 59.577 42.308 0.00 0.00 43.95 3.69
2351 2814 4.652822 AGTTCAATGGAAGGAGGTTGTAC 58.347 43.478 0.00 0.00 32.62 2.90
2362 2825 5.818678 AGGAGGTTGTACACTTGTATTGA 57.181 39.130 0.00 0.00 32.54 2.57
2404 2867 2.104792 CTCCGAATGGATTGCCTTCCTA 59.895 50.000 3.91 0.00 45.33 2.94
2405 2868 2.711009 TCCGAATGGATTGCCTTCCTAT 59.289 45.455 3.91 0.00 40.17 2.57
2406 2869 2.816087 CCGAATGGATTGCCTTCCTATG 59.184 50.000 3.91 0.00 37.49 2.23
2408 2871 2.986534 ATGGATTGCCTTCCTATGGG 57.013 50.000 3.91 0.00 36.68 4.00
2410 2873 1.776667 TGGATTGCCTTCCTATGGGAG 59.223 52.381 0.00 0.00 43.29 4.30
2412 2875 2.487986 GGATTGCCTTCCTATGGGAGTG 60.488 54.545 0.00 0.00 43.29 3.51
2426 2889 3.753434 AGTGGAGTCCGCTCGCTG 61.753 66.667 19.92 0.00 40.81 5.18
2435 2898 4.482684 CGCTCGCTGAAGCCTCGA 62.483 66.667 0.00 0.00 39.17 4.04
2439 2902 0.459237 CTCGCTGAAGCCTCGAATGT 60.459 55.000 0.00 0.00 37.91 2.71
2442 2905 0.449388 GCTGAAGCCTCGAATGTTGG 59.551 55.000 0.00 0.00 34.31 3.77
2446 2909 2.877691 GCCTCGAATGTTGGCACC 59.122 61.111 7.70 0.00 45.46 5.01
2447 2910 1.971167 GCCTCGAATGTTGGCACCA 60.971 57.895 7.70 0.00 45.46 4.17
2448 2911 1.875963 CCTCGAATGTTGGCACCAC 59.124 57.895 0.00 0.00 0.00 4.16
2450 2913 1.911293 CTCGAATGTTGGCACCACCG 61.911 60.000 2.97 2.97 43.94 4.94
2451 2914 2.258286 GAATGTTGGCACCACCGC 59.742 61.111 0.00 0.00 43.94 5.68
2463 2926 2.671070 CACCGCCCTGATGGTCTT 59.329 61.111 0.00 0.00 35.96 3.01
2472 2935 3.389329 GCCCTGATGGTCTTCAAGATCTA 59.611 47.826 0.00 0.00 36.04 1.98
2475 2938 5.454471 CCCTGATGGTCTTCAAGATCTAAGG 60.454 48.000 0.00 3.41 0.00 2.69
2478 2941 7.016072 CCTGATGGTCTTCAAGATCTAAGGTAT 59.984 40.741 0.00 0.00 0.00 2.73
2480 2943 6.485830 TGGTCTTCAAGATCTAAGGTATGG 57.514 41.667 0.00 0.00 0.00 2.74
2485 2948 8.303876 GTCTTCAAGATCTAAGGTATGGAGATC 58.696 40.741 4.50 3.43 43.95 2.75
2497 2960 2.614001 GGAGATCTCCTTGGCACCT 58.386 57.895 31.11 0.00 46.16 4.00
2502 2972 0.915364 ATCTCCTTGGCACCTTCTCC 59.085 55.000 0.00 0.00 0.00 3.71
2505 2975 1.676967 CCTTGGCACCTTCTCCTGC 60.677 63.158 0.00 0.00 0.00 4.85
2510 2980 2.673523 CACCTTCTCCTGCCCCTG 59.326 66.667 0.00 0.00 0.00 4.45
2513 2983 1.614824 CCTTCTCCTGCCCCTGACT 60.615 63.158 0.00 0.00 0.00 3.41
2527 2997 3.371380 CCCCTGACTAACGTCCTAGTACT 60.371 52.174 0.00 0.00 39.47 2.73
2533 3003 4.085009 ACTAACGTCCTAGTACTTGGCTT 58.915 43.478 17.50 10.92 30.13 4.35
2552 3022 5.746990 GCTTCTAGCCCTATCTTTATCCA 57.253 43.478 0.00 0.00 34.48 3.41
2553 3023 5.729510 GCTTCTAGCCCTATCTTTATCCAG 58.270 45.833 0.00 0.00 34.48 3.86
2555 3025 4.097418 TCTAGCCCTATCTTTATCCAGCC 58.903 47.826 0.00 0.00 0.00 4.85
2557 3027 4.147667 AGCCCTATCTTTATCCAGCCTA 57.852 45.455 0.00 0.00 0.00 3.93
2558 3028 3.841255 AGCCCTATCTTTATCCAGCCTAC 59.159 47.826 0.00 0.00 0.00 3.18
2564 3034 0.906066 TTTATCCAGCCTACGTGCCA 59.094 50.000 0.00 0.00 0.00 4.92
2567 3037 2.329539 ATCCAGCCTACGTGCCATGG 62.330 60.000 7.63 7.63 0.00 3.66
2573 3043 1.046472 CCTACGTGCCATGGACCCTA 61.046 60.000 18.40 0.00 0.00 3.53
2577 3047 1.140252 ACGTGCCATGGACCCTATTAC 59.860 52.381 18.40 0.00 0.00 1.89
2583 3053 2.299297 CCATGGACCCTATTACCGTCTC 59.701 54.545 5.56 0.00 0.00 3.36
2590 3060 5.394115 GGACCCTATTACCGTCTCGTTTTTA 60.394 44.000 0.00 0.00 0.00 1.52
2599 3069 3.619483 CCGTCTCGTTTTTATGGCATGTA 59.381 43.478 10.98 0.00 0.00 2.29
2601 3071 5.432157 CGTCTCGTTTTTATGGCATGTATC 58.568 41.667 10.98 0.00 0.00 2.24
2603 3073 4.819630 TCTCGTTTTTATGGCATGTATCCC 59.180 41.667 10.98 0.00 0.00 3.85
2613 3083 6.763715 ATGGCATGTATCCCTTAACTTCTA 57.236 37.500 0.00 0.00 0.00 2.10
2614 3084 6.174720 TGGCATGTATCCCTTAACTTCTAG 57.825 41.667 0.00 0.00 0.00 2.43
2619 3089 7.014808 GCATGTATCCCTTAACTTCTAGACTCT 59.985 40.741 0.00 0.00 0.00 3.24
2625 3095 7.884891 TCCCTTAACTTCTAGACTCTCCTATT 58.115 38.462 0.00 0.00 0.00 1.73
2634 3104 6.936279 TCTAGACTCTCCTATTGTTTGTTGG 58.064 40.000 0.00 0.00 0.00 3.77
2638 3108 3.670625 TCTCCTATTGTTTGTTGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
2648 3119 2.527123 TTGGACGGTGGTGCCCTA 60.527 61.111 0.00 0.00 32.82 3.53
2709 3180 8.511604 AAAATCTATGACCCTGATAAGTGTTG 57.488 34.615 0.00 0.00 0.00 3.33
2710 3181 7.437713 AATCTATGACCCTGATAAGTGTTGA 57.562 36.000 0.00 0.00 0.00 3.18
2711 3182 6.867519 TCTATGACCCTGATAAGTGTTGAA 57.132 37.500 0.00 0.00 0.00 2.69
2712 3183 6.640518 TCTATGACCCTGATAAGTGTTGAAC 58.359 40.000 0.00 0.00 0.00 3.18
2713 3184 3.659786 TGACCCTGATAAGTGTTGAACG 58.340 45.455 0.00 0.00 0.00 3.95
2714 3185 3.070446 TGACCCTGATAAGTGTTGAACGT 59.930 43.478 0.00 0.00 0.00 3.99
2715 3186 3.660865 ACCCTGATAAGTGTTGAACGTC 58.339 45.455 0.00 0.00 0.00 4.34
2716 3187 3.070446 ACCCTGATAAGTGTTGAACGTCA 59.930 43.478 0.00 0.00 0.00 4.35
2717 3188 3.679980 CCCTGATAAGTGTTGAACGTCAG 59.320 47.826 0.00 0.08 37.38 3.51
2718 3189 3.679980 CCTGATAAGTGTTGAACGTCAGG 59.320 47.826 14.42 14.42 44.15 3.86
2719 3190 4.307432 CTGATAAGTGTTGAACGTCAGGT 58.693 43.478 0.00 0.00 35.66 4.00
2720 3191 5.456548 TGATAAGTGTTGAACGTCAGGTA 57.543 39.130 0.00 0.00 0.00 3.08
2721 3192 5.224888 TGATAAGTGTTGAACGTCAGGTAC 58.775 41.667 0.00 0.00 0.00 3.34
2731 3202 3.814577 GTCAGGTACGAGCACATGT 57.185 52.632 0.00 0.00 32.24 3.21
2732 3203 1.630148 GTCAGGTACGAGCACATGTC 58.370 55.000 0.00 0.00 32.24 3.06
2733 3204 1.067846 GTCAGGTACGAGCACATGTCA 60.068 52.381 0.00 0.00 32.24 3.58
2734 3205 1.616374 TCAGGTACGAGCACATGTCAA 59.384 47.619 0.00 0.00 32.24 3.18
2735 3206 1.726791 CAGGTACGAGCACATGTCAAC 59.273 52.381 0.00 0.00 0.00 3.18
2736 3207 1.618837 AGGTACGAGCACATGTCAACT 59.381 47.619 0.00 0.00 0.00 3.16
2737 3208 2.037251 AGGTACGAGCACATGTCAACTT 59.963 45.455 0.00 0.00 0.00 2.66
2738 3209 2.412089 GGTACGAGCACATGTCAACTTC 59.588 50.000 0.00 0.00 0.00 3.01
2739 3210 2.238942 ACGAGCACATGTCAACTTCA 57.761 45.000 0.00 0.00 0.00 3.02
2740 3211 2.560504 ACGAGCACATGTCAACTTCAA 58.439 42.857 0.00 0.00 0.00 2.69
2741 3212 2.942376 ACGAGCACATGTCAACTTCAAA 59.058 40.909 0.00 0.00 0.00 2.69
2742 3213 3.242739 ACGAGCACATGTCAACTTCAAAC 60.243 43.478 0.00 0.00 0.00 2.93
2743 3214 3.291585 GAGCACATGTCAACTTCAAACG 58.708 45.455 0.00 0.00 0.00 3.60
2744 3215 2.682856 AGCACATGTCAACTTCAAACGT 59.317 40.909 0.00 0.00 0.00 3.99
2745 3216 3.128589 AGCACATGTCAACTTCAAACGTT 59.871 39.130 0.00 0.00 0.00 3.99
2746 3217 3.857093 GCACATGTCAACTTCAAACGTTT 59.143 39.130 7.96 7.96 0.00 3.60
2747 3218 4.326009 GCACATGTCAACTTCAAACGTTTT 59.674 37.500 11.66 0.00 0.00 2.43
2748 3219 5.164002 GCACATGTCAACTTCAAACGTTTTT 60.164 36.000 11.66 0.00 0.00 1.94
2749 3220 6.034044 GCACATGTCAACTTCAAACGTTTTTA 59.966 34.615 11.66 0.00 0.00 1.52
2750 3221 7.253950 GCACATGTCAACTTCAAACGTTTTTAT 60.254 33.333 11.66 0.00 0.00 1.40
2751 3222 8.049592 CACATGTCAACTTCAAACGTTTTTATG 58.950 33.333 11.66 7.53 0.00 1.90
2752 3223 7.221838 ACATGTCAACTTCAAACGTTTTTATGG 59.778 33.333 11.66 0.00 0.00 2.74
2753 3224 5.517054 TGTCAACTTCAAACGTTTTTATGGC 59.483 36.000 11.66 8.49 0.00 4.40
2754 3225 5.517054 GTCAACTTCAAACGTTTTTATGGCA 59.483 36.000 11.66 0.00 0.00 4.92
2755 3226 6.035112 GTCAACTTCAAACGTTTTTATGGCAA 59.965 34.615 11.66 0.00 0.00 4.52
2756 3227 6.590292 TCAACTTCAAACGTTTTTATGGCAAA 59.410 30.769 11.66 0.00 0.00 3.68
2757 3228 7.278868 TCAACTTCAAACGTTTTTATGGCAAAT 59.721 29.630 11.66 0.00 0.00 2.32
2758 3229 7.546778 ACTTCAAACGTTTTTATGGCAAATT 57.453 28.000 11.66 0.00 0.00 1.82
2759 3230 7.980062 ACTTCAAACGTTTTTATGGCAAATTT 58.020 26.923 11.66 0.00 0.00 1.82
2760 3231 9.099454 ACTTCAAACGTTTTTATGGCAAATTTA 57.901 25.926 11.66 0.00 0.00 1.40
2761 3232 9.579610 CTTCAAACGTTTTTATGGCAAATTTAG 57.420 29.630 11.66 0.00 0.00 1.85
2762 3233 8.649973 TCAAACGTTTTTATGGCAAATTTAGT 57.350 26.923 11.66 0.00 0.00 2.24
2763 3234 9.099454 TCAAACGTTTTTATGGCAAATTTAGTT 57.901 25.926 11.66 0.00 0.00 2.24
2767 3238 8.652463 ACGTTTTTATGGCAAATTTAGTTATGC 58.348 29.630 0.00 0.00 38.06 3.14
2768 3239 7.838879 CGTTTTTATGGCAAATTTAGTTATGCG 59.161 33.333 0.00 0.00 39.66 4.73
2769 3240 8.865001 GTTTTTATGGCAAATTTAGTTATGCGA 58.135 29.630 0.00 0.00 39.66 5.10
2770 3241 8.627487 TTTTATGGCAAATTTAGTTATGCGAG 57.373 30.769 0.00 0.00 39.66 5.03
2771 3242 4.630894 TGGCAAATTTAGTTATGCGAGG 57.369 40.909 0.00 0.00 39.66 4.63
2772 3243 4.265893 TGGCAAATTTAGTTATGCGAGGA 58.734 39.130 0.00 0.00 39.66 3.71
2773 3244 4.887071 TGGCAAATTTAGTTATGCGAGGAT 59.113 37.500 0.00 0.00 39.66 3.24
2774 3245 5.215160 GGCAAATTTAGTTATGCGAGGATG 58.785 41.667 0.00 0.00 39.66 3.51
2775 3246 5.215160 GCAAATTTAGTTATGCGAGGATGG 58.785 41.667 0.00 0.00 0.00 3.51
2776 3247 5.215160 CAAATTTAGTTATGCGAGGATGGC 58.785 41.667 0.00 0.00 41.71 4.40
2777 3248 2.543777 TTAGTTATGCGAGGATGGCC 57.456 50.000 0.00 0.00 40.03 5.36
2787 3258 3.596362 AGGATGGCCTTTAGTTGGC 57.404 52.632 3.32 0.00 43.90 4.52
2796 3267 3.221964 CCTTTAGTTGGCAAGCATGTC 57.778 47.619 0.00 0.00 0.00 3.06
2797 3268 2.557924 CCTTTAGTTGGCAAGCATGTCA 59.442 45.455 0.00 0.00 40.01 3.58
2802 3273 2.798976 TTGGCAAGCATGTCAACTTC 57.201 45.000 4.59 0.00 45.79 3.01
2803 3274 0.961019 TGGCAAGCATGTCAACTTCC 59.039 50.000 0.00 0.00 38.47 3.46
2804 3275 0.961019 GGCAAGCATGTCAACTTCCA 59.039 50.000 0.00 0.00 0.00 3.53
2805 3276 1.547372 GGCAAGCATGTCAACTTCCAT 59.453 47.619 0.00 0.00 0.00 3.41
2806 3277 2.602878 GCAAGCATGTCAACTTCCATG 58.397 47.619 0.00 0.00 41.08 3.66
2813 3284 5.633830 CATGTCAACTTCCATGCTTTAGT 57.366 39.130 0.00 0.00 32.80 2.24
2814 3285 6.017400 CATGTCAACTTCCATGCTTTAGTT 57.983 37.500 0.00 0.00 32.80 2.24
2815 3286 5.437289 TGTCAACTTCCATGCTTTAGTTG 57.563 39.130 15.49 15.49 45.44 3.16
2816 3287 4.278170 TGTCAACTTCCATGCTTTAGTTGG 59.722 41.667 18.76 0.00 44.63 3.77
2817 3288 3.255642 TCAACTTCCATGCTTTAGTTGGC 59.744 43.478 18.76 0.00 44.63 4.52
2818 3289 2.171003 ACTTCCATGCTTTAGTTGGCC 58.829 47.619 0.00 0.00 0.00 5.36
2819 3290 1.478105 CTTCCATGCTTTAGTTGGCCC 59.522 52.381 0.00 0.00 0.00 5.80
2820 3291 0.704076 TCCATGCTTTAGTTGGCCCT 59.296 50.000 0.00 0.00 0.00 5.19
2821 3292 1.919654 TCCATGCTTTAGTTGGCCCTA 59.080 47.619 0.00 0.00 0.00 3.53
2822 3293 2.092429 TCCATGCTTTAGTTGGCCCTAG 60.092 50.000 0.00 0.00 0.00 3.02
2823 3294 2.301346 CATGCTTTAGTTGGCCCTAGG 58.699 52.381 0.06 0.06 0.00 3.02
2840 3311 3.688553 GGCACACCTATACCTGCTC 57.311 57.895 0.00 0.00 0.00 4.26
2841 3312 0.830648 GGCACACCTATACCTGCTCA 59.169 55.000 0.00 0.00 0.00 4.26
2842 3313 1.202580 GGCACACCTATACCTGCTCAG 60.203 57.143 0.00 0.00 0.00 3.35
2843 3314 1.808133 GCACACCTATACCTGCTCAGC 60.808 57.143 0.00 0.00 0.00 4.26
2844 3315 0.747255 ACACCTATACCTGCTCAGCG 59.253 55.000 0.00 0.00 0.00 5.18
2845 3316 1.032794 CACCTATACCTGCTCAGCGA 58.967 55.000 0.00 0.00 0.00 4.93
2846 3317 1.033574 ACCTATACCTGCTCAGCGAC 58.966 55.000 0.00 0.00 0.00 5.19
2847 3318 0.315568 CCTATACCTGCTCAGCGACC 59.684 60.000 0.00 0.00 0.00 4.79
2848 3319 0.315568 CTATACCTGCTCAGCGACCC 59.684 60.000 0.00 0.00 0.00 4.46
2849 3320 1.113517 TATACCTGCTCAGCGACCCC 61.114 60.000 0.00 0.00 0.00 4.95
2852 3323 3.842923 CTGCTCAGCGACCCCGAT 61.843 66.667 0.00 0.00 38.22 4.18
2867 3338 3.654020 GATGCCGCCGCCATCTTC 61.654 66.667 0.12 0.00 0.00 2.87
2868 3339 4.181010 ATGCCGCCGCCATCTTCT 62.181 61.111 0.00 0.00 0.00 2.85
2874 3345 3.801997 CCGCCATCTTCTGCCCCT 61.802 66.667 0.00 0.00 0.00 4.79
2875 3346 2.203126 CGCCATCTTCTGCCCCTC 60.203 66.667 0.00 0.00 0.00 4.30
2876 3347 2.194326 GCCATCTTCTGCCCCTCC 59.806 66.667 0.00 0.00 0.00 4.30
2877 3348 2.683465 GCCATCTTCTGCCCCTCCA 61.683 63.158 0.00 0.00 0.00 3.86
2878 3349 1.225704 CCATCTTCTGCCCCTCCAC 59.774 63.158 0.00 0.00 0.00 4.02
2879 3350 1.277580 CCATCTTCTGCCCCTCCACT 61.278 60.000 0.00 0.00 0.00 4.00
2880 3351 0.622665 CATCTTCTGCCCCTCCACTT 59.377 55.000 0.00 0.00 0.00 3.16
2881 3352 1.005215 CATCTTCTGCCCCTCCACTTT 59.995 52.381 0.00 0.00 0.00 2.66
2882 3353 0.693049 TCTTCTGCCCCTCCACTTTC 59.307 55.000 0.00 0.00 0.00 2.62
2883 3354 0.695347 CTTCTGCCCCTCCACTTTCT 59.305 55.000 0.00 0.00 0.00 2.52
2884 3355 1.909302 CTTCTGCCCCTCCACTTTCTA 59.091 52.381 0.00 0.00 0.00 2.10
2885 3356 1.573108 TCTGCCCCTCCACTTTCTAG 58.427 55.000 0.00 0.00 0.00 2.43
2886 3357 1.078823 TCTGCCCCTCCACTTTCTAGA 59.921 52.381 0.00 0.00 0.00 2.43
2887 3358 1.208293 CTGCCCCTCCACTTTCTAGAC 59.792 57.143 0.00 0.00 0.00 2.59
2888 3359 0.542333 GCCCCTCCACTTTCTAGACC 59.458 60.000 0.00 0.00 0.00 3.85
2889 3360 0.824759 CCCCTCCACTTTCTAGACCG 59.175 60.000 0.00 0.00 0.00 4.79
2890 3361 1.558233 CCCTCCACTTTCTAGACCGT 58.442 55.000 0.00 0.00 0.00 4.83
2891 3362 1.900486 CCCTCCACTTTCTAGACCGTT 59.100 52.381 0.00 0.00 0.00 4.44
2892 3363 2.353803 CCCTCCACTTTCTAGACCGTTG 60.354 54.545 0.00 0.00 0.00 4.10
2893 3364 2.353803 CCTCCACTTTCTAGACCGTTGG 60.354 54.545 0.00 0.00 0.00 3.77
2894 3365 1.001633 TCCACTTTCTAGACCGTTGGC 59.998 52.381 0.00 0.00 0.00 4.52
2895 3366 1.068474 CACTTTCTAGACCGTTGGCG 58.932 55.000 0.00 0.00 37.95 5.69
2896 3367 0.963962 ACTTTCTAGACCGTTGGCGA 59.036 50.000 0.00 0.00 41.33 5.54
2897 3368 1.336609 ACTTTCTAGACCGTTGGCGAC 60.337 52.381 0.00 0.00 41.33 5.19
2906 3377 2.279918 GTTGGCGACGGACACACT 60.280 61.111 0.00 0.00 0.00 3.55
2907 3378 1.885850 GTTGGCGACGGACACACTT 60.886 57.895 0.00 0.00 0.00 3.16
2908 3379 1.885388 TTGGCGACGGACACACTTG 60.885 57.895 0.00 0.00 0.00 3.16
2909 3380 3.712881 GGCGACGGACACACTTGC 61.713 66.667 0.00 0.00 0.00 4.01
2910 3381 3.712881 GCGACGGACACACTTGCC 61.713 66.667 0.00 0.00 0.00 4.52
2911 3382 2.029073 CGACGGACACACTTGCCT 59.971 61.111 0.00 0.00 0.00 4.75
2912 3383 2.022129 CGACGGACACACTTGCCTC 61.022 63.158 0.00 0.00 0.00 4.70
2913 3384 1.367840 GACGGACACACTTGCCTCT 59.632 57.895 0.00 0.00 0.00 3.69
2914 3385 0.249911 GACGGACACACTTGCCTCTT 60.250 55.000 0.00 0.00 0.00 2.85
2915 3386 0.249911 ACGGACACACTTGCCTCTTC 60.250 55.000 0.00 0.00 0.00 2.87
2916 3387 0.034059 CGGACACACTTGCCTCTTCT 59.966 55.000 0.00 0.00 0.00 2.85
2917 3388 1.517242 GGACACACTTGCCTCTTCTG 58.483 55.000 0.00 0.00 0.00 3.02
2918 3389 1.517242 GACACACTTGCCTCTTCTGG 58.483 55.000 0.00 0.00 0.00 3.86
2919 3390 0.839946 ACACACTTGCCTCTTCTGGT 59.160 50.000 0.00 0.00 0.00 4.00
2920 3391 1.202698 ACACACTTGCCTCTTCTGGTC 60.203 52.381 0.00 0.00 0.00 4.02
2921 3392 1.071385 CACACTTGCCTCTTCTGGTCT 59.929 52.381 0.00 0.00 0.00 3.85
2922 3393 1.071385 ACACTTGCCTCTTCTGGTCTG 59.929 52.381 0.00 0.00 0.00 3.51
2923 3394 1.345741 CACTTGCCTCTTCTGGTCTGA 59.654 52.381 0.00 0.00 0.00 3.27
2924 3395 2.027377 CACTTGCCTCTTCTGGTCTGAT 60.027 50.000 0.00 0.00 0.00 2.90
2925 3396 2.235898 ACTTGCCTCTTCTGGTCTGATC 59.764 50.000 0.00 0.00 0.00 2.92
2926 3397 1.198713 TGCCTCTTCTGGTCTGATCC 58.801 55.000 0.00 0.00 0.00 3.36
2927 3398 1.273495 TGCCTCTTCTGGTCTGATCCT 60.273 52.381 0.00 0.00 0.00 3.24
2928 3399 1.836802 GCCTCTTCTGGTCTGATCCTT 59.163 52.381 0.00 0.00 0.00 3.36
2929 3400 2.419851 GCCTCTTCTGGTCTGATCCTTG 60.420 54.545 0.00 0.00 0.00 3.61
2930 3401 2.170187 CCTCTTCTGGTCTGATCCTTGG 59.830 54.545 0.00 0.00 0.00 3.61
2931 3402 3.102972 CTCTTCTGGTCTGATCCTTGGA 58.897 50.000 0.00 0.00 0.00 3.53
2932 3403 3.710677 CTCTTCTGGTCTGATCCTTGGAT 59.289 47.826 1.18 1.18 0.00 3.41
2933 3404 4.107072 TCTTCTGGTCTGATCCTTGGATT 58.893 43.478 3.43 0.00 0.00 3.01
2934 3405 3.920231 TCTGGTCTGATCCTTGGATTG 57.080 47.619 3.43 1.20 0.00 2.67
2935 3406 3.453868 TCTGGTCTGATCCTTGGATTGA 58.546 45.455 3.43 3.42 0.00 2.57
2936 3407 4.042884 TCTGGTCTGATCCTTGGATTGAT 58.957 43.478 3.43 0.00 0.00 2.57
2937 3408 4.135306 CTGGTCTGATCCTTGGATTGATG 58.865 47.826 3.43 0.00 0.00 3.07
2938 3409 3.117776 TGGTCTGATCCTTGGATTGATGG 60.118 47.826 3.43 0.00 0.00 3.51
2939 3410 2.883386 GTCTGATCCTTGGATTGATGGC 59.117 50.000 3.43 0.00 0.00 4.40
2940 3411 2.158564 TCTGATCCTTGGATTGATGGCC 60.159 50.000 3.43 0.00 0.00 5.36
2941 3412 1.570024 TGATCCTTGGATTGATGGCCA 59.430 47.619 8.56 8.56 0.00 5.36
2942 3413 2.236766 GATCCTTGGATTGATGGCCAG 58.763 52.381 13.05 0.00 35.23 4.85
2943 3414 1.002069 TCCTTGGATTGATGGCCAGT 58.998 50.000 13.05 0.00 35.23 4.00
2944 3415 1.064463 TCCTTGGATTGATGGCCAGTC 60.064 52.381 13.05 9.86 35.23 3.51
2945 3416 1.064166 CCTTGGATTGATGGCCAGTCT 60.064 52.381 13.05 0.00 35.23 3.24
2946 3417 2.022195 CTTGGATTGATGGCCAGTCTG 58.978 52.381 13.05 0.00 35.23 3.51
2947 3418 0.994247 TGGATTGATGGCCAGTCTGT 59.006 50.000 13.05 0.00 32.69 3.41
2948 3419 1.065199 TGGATTGATGGCCAGTCTGTC 60.065 52.381 13.05 3.53 32.69 3.51
2949 3420 1.065199 GGATTGATGGCCAGTCTGTCA 60.065 52.381 13.05 6.75 32.69 3.58
2950 3421 2.422519 GGATTGATGGCCAGTCTGTCAT 60.423 50.000 13.05 2.60 32.69 3.06
2951 3422 2.408271 TTGATGGCCAGTCTGTCATC 57.592 50.000 13.05 18.85 37.21 2.92
2952 3423 0.176449 TGATGGCCAGTCTGTCATCG 59.824 55.000 13.05 0.51 38.92 3.84
2953 3424 0.461548 GATGGCCAGTCTGTCATCGA 59.538 55.000 13.05 0.00 0.00 3.59
2954 3425 0.176680 ATGGCCAGTCTGTCATCGAC 59.823 55.000 13.05 0.00 0.00 4.20
2955 3426 1.184970 TGGCCAGTCTGTCATCGACA 61.185 55.000 0.00 0.00 40.50 4.35
2956 3427 0.176680 GGCCAGTCTGTCATCGACAT 59.823 55.000 0.00 0.00 41.94 3.06
2957 3428 1.565305 GCCAGTCTGTCATCGACATC 58.435 55.000 0.00 0.00 41.94 3.06
2958 3429 1.832600 CCAGTCTGTCATCGACATCG 58.167 55.000 0.00 0.00 41.94 3.84
2959 3430 1.195347 CAGTCTGTCATCGACATCGC 58.805 55.000 0.00 0.00 41.94 4.58
2960 3431 0.101399 AGTCTGTCATCGACATCGCC 59.899 55.000 0.00 0.00 41.94 5.54
2961 3432 0.872021 GTCTGTCATCGACATCGCCC 60.872 60.000 0.00 0.00 41.94 6.13
2962 3433 1.592669 CTGTCATCGACATCGCCCC 60.593 63.158 0.00 0.00 41.94 5.80
2963 3434 2.658593 GTCATCGACATCGCCCCG 60.659 66.667 0.00 0.00 39.60 5.73
2964 3435 3.144871 TCATCGACATCGCCCCGT 61.145 61.111 0.00 0.00 39.60 5.28
2965 3436 2.202878 CATCGACATCGCCCCGTT 60.203 61.111 0.00 0.00 39.60 4.44
2966 3437 2.202878 ATCGACATCGCCCCGTTG 60.203 61.111 0.00 0.00 39.60 4.10
2967 3438 3.014085 ATCGACATCGCCCCGTTGT 62.014 57.895 0.00 1.46 41.50 3.32
2968 3439 2.515996 ATCGACATCGCCCCGTTGTT 62.516 55.000 0.00 0.00 39.40 2.83
2969 3440 2.867472 GACATCGCCCCGTTGTTG 59.133 61.111 3.29 0.00 39.40 3.33
2970 3441 1.669760 GACATCGCCCCGTTGTTGA 60.670 57.895 3.29 0.00 39.40 3.18
2971 3442 1.002624 ACATCGCCCCGTTGTTGAT 60.003 52.632 0.00 0.00 36.58 2.57
2972 3443 1.024579 ACATCGCCCCGTTGTTGATC 61.025 55.000 0.00 0.00 36.58 2.92
2973 3444 1.451387 ATCGCCCCGTTGTTGATCC 60.451 57.895 0.00 0.00 0.00 3.36
2974 3445 1.910580 ATCGCCCCGTTGTTGATCCT 61.911 55.000 0.00 0.00 0.00 3.24
2975 3446 2.398554 CGCCCCGTTGTTGATCCTG 61.399 63.158 0.00 0.00 0.00 3.86
2976 3447 1.303317 GCCCCGTTGTTGATCCTGT 60.303 57.895 0.00 0.00 0.00 4.00
2977 3448 0.893727 GCCCCGTTGTTGATCCTGTT 60.894 55.000 0.00 0.00 0.00 3.16
2978 3449 0.881118 CCCCGTTGTTGATCCTGTTG 59.119 55.000 0.00 0.00 0.00 3.33
2979 3450 0.881118 CCCGTTGTTGATCCTGTTGG 59.119 55.000 0.00 0.00 0.00 3.77
2980 3451 1.604604 CCGTTGTTGATCCTGTTGGT 58.395 50.000 0.00 0.00 34.23 3.67
2981 3452 1.535462 CCGTTGTTGATCCTGTTGGTC 59.465 52.381 0.00 0.00 34.23 4.02
2982 3453 1.535462 CGTTGTTGATCCTGTTGGTCC 59.465 52.381 0.00 0.00 34.23 4.46
2983 3454 1.886542 GTTGTTGATCCTGTTGGTCCC 59.113 52.381 0.00 0.00 34.23 4.46
2984 3455 0.036164 TGTTGATCCTGTTGGTCCCG 59.964 55.000 0.00 0.00 34.23 5.14
2985 3456 0.036306 GTTGATCCTGTTGGTCCCGT 59.964 55.000 0.00 0.00 34.23 5.28
2986 3457 0.036164 TTGATCCTGTTGGTCCCGTG 59.964 55.000 0.00 0.00 34.23 4.94
2987 3458 1.745489 GATCCTGTTGGTCCCGTGC 60.745 63.158 0.00 0.00 34.23 5.34
2988 3459 3.268103 ATCCTGTTGGTCCCGTGCC 62.268 63.158 0.00 0.00 34.23 5.01
2989 3460 4.263572 CCTGTTGGTCCCGTGCCA 62.264 66.667 0.00 0.00 0.00 4.92
2990 3461 2.034066 CTGTTGGTCCCGTGCCAT 59.966 61.111 0.00 0.00 35.71 4.40
2991 3462 2.033448 TGTTGGTCCCGTGCCATC 59.967 61.111 0.00 0.00 35.71 3.51
2992 3463 3.124921 GTTGGTCCCGTGCCATCG 61.125 66.667 0.00 0.00 35.71 3.84
2993 3464 3.632080 TTGGTCCCGTGCCATCGT 61.632 61.111 0.00 0.00 35.71 3.73
2994 3465 3.599285 TTGGTCCCGTGCCATCGTC 62.599 63.158 0.00 0.00 35.71 4.20
2999 3470 3.418913 CCGTGCCATCGTCGCAAA 61.419 61.111 0.00 0.00 38.13 3.68
3000 3471 2.553770 CGTGCCATCGTCGCAAAA 59.446 55.556 0.00 0.00 38.13 2.44
3001 3472 1.134487 CGTGCCATCGTCGCAAAAT 59.866 52.632 0.00 0.00 38.13 1.82
3002 3473 0.857311 CGTGCCATCGTCGCAAAATC 60.857 55.000 0.00 0.00 38.13 2.17
3003 3474 0.447801 GTGCCATCGTCGCAAAATCT 59.552 50.000 0.00 0.00 38.13 2.40
3004 3475 0.447406 TGCCATCGTCGCAAAATCTG 59.553 50.000 0.00 0.00 32.05 2.90
3014 3485 1.508088 CAAAATCTGCTCCGTGGCC 59.492 57.895 0.00 0.00 0.00 5.36
3015 3486 1.074775 AAAATCTGCTCCGTGGCCA 59.925 52.632 0.00 0.00 0.00 5.36
3016 3487 0.539438 AAAATCTGCTCCGTGGCCAA 60.539 50.000 7.24 0.00 0.00 4.52
3017 3488 1.244019 AAATCTGCTCCGTGGCCAAC 61.244 55.000 7.24 0.15 0.00 3.77
3018 3489 2.410322 AATCTGCTCCGTGGCCAACA 62.410 55.000 7.24 0.00 0.00 3.33
3019 3490 2.410322 ATCTGCTCCGTGGCCAACAA 62.410 55.000 7.24 0.00 0.00 2.83
3020 3491 2.594303 TGCTCCGTGGCCAACAAG 60.594 61.111 7.24 6.03 0.00 3.16
3021 3492 2.594592 GCTCCGTGGCCAACAAGT 60.595 61.111 7.24 0.00 0.00 3.16
3022 3493 2.193536 GCTCCGTGGCCAACAAGTT 61.194 57.895 7.24 0.00 0.00 2.66
3023 3494 1.654220 CTCCGTGGCCAACAAGTTG 59.346 57.895 7.24 0.00 40.13 3.16
3039 3510 2.609299 TGGCGGACCATTCCTGGA 60.609 61.111 0.00 0.00 46.37 3.86
3040 3511 2.000701 TGGCGGACCATTCCTGGAT 61.001 57.895 0.00 0.00 46.37 3.41
3041 3512 1.227383 GGCGGACCATTCCTGGATT 59.773 57.895 0.00 0.00 46.37 3.01
3042 3513 0.819666 GGCGGACCATTCCTGGATTC 60.820 60.000 0.00 0.00 46.37 2.52
3043 3514 1.160329 GCGGACCATTCCTGGATTCG 61.160 60.000 0.00 0.00 46.37 3.34
3044 3515 0.178068 CGGACCATTCCTGGATTCGT 59.822 55.000 0.00 0.00 46.37 3.85
3045 3516 1.668419 GGACCATTCCTGGATTCGTG 58.332 55.000 0.00 0.00 46.37 4.35
3046 3517 1.209504 GGACCATTCCTGGATTCGTGA 59.790 52.381 0.00 0.00 46.37 4.35
3047 3518 2.280628 GACCATTCCTGGATTCGTGAC 58.719 52.381 0.00 0.00 46.37 3.67
3048 3519 1.628340 ACCATTCCTGGATTCGTGACA 59.372 47.619 0.00 0.00 46.37 3.58
3049 3520 2.239654 ACCATTCCTGGATTCGTGACAT 59.760 45.455 0.00 0.00 46.37 3.06
3050 3521 2.874701 CCATTCCTGGATTCGTGACATC 59.125 50.000 0.00 0.00 46.37 3.06
3051 3522 2.691409 TTCCTGGATTCGTGACATCC 57.309 50.000 0.00 0.00 40.80 3.51
3052 3523 0.459899 TCCTGGATTCGTGACATCCG 59.540 55.000 0.00 0.00 43.04 4.18
3053 3524 0.175760 CCTGGATTCGTGACATCCGT 59.824 55.000 0.00 0.00 43.04 4.69
3054 3525 1.407618 CCTGGATTCGTGACATCCGTA 59.592 52.381 0.00 0.00 43.04 4.02
3055 3526 2.543861 CCTGGATTCGTGACATCCGTAG 60.544 54.545 0.00 0.00 43.04 3.51
3056 3527 1.202371 TGGATTCGTGACATCCGTAGC 60.202 52.381 0.00 0.00 43.04 3.58
3057 3528 1.121240 GATTCGTGACATCCGTAGCG 58.879 55.000 0.00 0.00 0.00 4.26
3058 3529 0.870307 ATTCGTGACATCCGTAGCGC 60.870 55.000 0.00 0.00 0.00 5.92
3059 3530 1.929806 TTCGTGACATCCGTAGCGCT 61.930 55.000 17.26 17.26 0.00 5.92
3060 3531 1.516386 CGTGACATCCGTAGCGCTT 60.516 57.895 18.68 0.00 0.00 4.68
3061 3532 1.076533 CGTGACATCCGTAGCGCTTT 61.077 55.000 18.68 0.00 0.00 3.51
3062 3533 0.370273 GTGACATCCGTAGCGCTTTG 59.630 55.000 18.68 8.65 0.00 2.77
3063 3534 0.739462 TGACATCCGTAGCGCTTTGG 60.739 55.000 18.68 18.69 0.00 3.28
3064 3535 1.429148 GACATCCGTAGCGCTTTGGG 61.429 60.000 18.68 15.20 0.00 4.12
3065 3536 2.513897 ATCCGTAGCGCTTTGGGC 60.514 61.111 18.68 0.00 41.91 5.36
3066 3537 4.770874 TCCGTAGCGCTTTGGGCC 62.771 66.667 18.68 0.00 42.59 5.80
3082 3553 4.690719 CCCGGCCGCACTGTTACA 62.691 66.667 22.85 0.00 0.00 2.41
3083 3554 3.118454 CCGGCCGCACTGTTACAG 61.118 66.667 22.85 11.21 37.52 2.74
3084 3555 2.357034 CGGCCGCACTGTTACAGT 60.357 61.111 14.67 12.76 46.51 3.55
3085 3556 1.080366 CGGCCGCACTGTTACAGTA 60.080 57.895 18.19 0.00 43.43 2.74
3086 3557 1.349259 CGGCCGCACTGTTACAGTAC 61.349 60.000 18.19 11.69 43.43 2.73
3087 3558 1.017701 GGCCGCACTGTTACAGTACC 61.018 60.000 18.19 12.90 43.43 3.34
3088 3559 0.037605 GCCGCACTGTTACAGTACCT 60.038 55.000 18.19 0.00 43.43 3.08
3089 3560 1.992170 CCGCACTGTTACAGTACCTC 58.008 55.000 18.19 6.88 43.43 3.85
3090 3561 1.614385 CGCACTGTTACAGTACCTCG 58.386 55.000 18.19 14.21 43.43 4.63
3091 3562 1.198408 CGCACTGTTACAGTACCTCGA 59.802 52.381 18.19 0.00 43.43 4.04
3092 3563 2.593257 GCACTGTTACAGTACCTCGAC 58.407 52.381 18.19 0.00 43.43 4.20
3093 3564 2.670509 GCACTGTTACAGTACCTCGACC 60.671 54.545 18.19 0.00 43.43 4.79
3094 3565 2.818432 CACTGTTACAGTACCTCGACCT 59.182 50.000 18.19 0.00 43.43 3.85
3095 3566 3.080319 ACTGTTACAGTACCTCGACCTC 58.920 50.000 17.13 0.00 43.46 3.85
3096 3567 3.244840 ACTGTTACAGTACCTCGACCTCT 60.245 47.826 17.13 0.00 43.46 3.69
3097 3568 3.079578 TGTTACAGTACCTCGACCTCTG 58.920 50.000 0.00 0.00 0.00 3.35
3098 3569 2.414994 TACAGTACCTCGACCTCTGG 57.585 55.000 0.00 0.00 0.00 3.86
3099 3570 0.966370 ACAGTACCTCGACCTCTGGC 60.966 60.000 0.00 0.00 0.00 4.85
3100 3571 1.749638 AGTACCTCGACCTCTGGCG 60.750 63.158 0.00 0.00 0.00 5.69
3101 3572 3.138798 TACCTCGACCTCTGGCGC 61.139 66.667 0.00 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 8.008332 TCATAGGTACACTATTTGGGTATCAGA 58.992 37.037 0.00 0.00 40.42 3.27
34 35 7.874016 TCAAAACAACGTTCATAGGTACACTAT 59.126 33.333 0.00 0.00 43.18 2.12
41 42 6.627395 TCATTCAAAACAACGTTCATAGGT 57.373 33.333 0.00 0.00 0.00 3.08
51 52 9.777843 CGCTAAGTTTTATTCATTCAAAACAAC 57.222 29.630 11.27 0.00 43.74 3.32
117 118 7.254932 GCGCCTTTGTTTTTCTCTCTATGATAT 60.255 37.037 0.00 0.00 0.00 1.63
204 208 1.224069 GCTGATGTGTGCGACTGTGT 61.224 55.000 0.00 0.00 0.00 3.72
250 254 1.677633 TCGCCTCGTGGAGTCATGA 60.678 57.895 7.92 0.00 37.37 3.07
409 414 9.778741 ATAAACTGTAAGACAACAAGATCTCAA 57.221 29.630 0.00 0.00 37.43 3.02
413 418 8.592998 CGGTATAAACTGTAAGACAACAAGATC 58.407 37.037 0.00 0.00 37.43 2.75
567 584 9.460019 AGTGGGAAAAAGAAATTCAAATTCAAA 57.540 25.926 0.00 0.00 0.00 2.69
568 585 8.891720 CAGTGGGAAAAAGAAATTCAAATTCAA 58.108 29.630 0.00 0.00 0.00 2.69
569 586 7.012232 GCAGTGGGAAAAAGAAATTCAAATTCA 59.988 33.333 0.00 0.00 0.00 2.57
570 587 7.355017 GCAGTGGGAAAAAGAAATTCAAATTC 58.645 34.615 0.00 0.00 0.00 2.17
571 588 6.018016 CGCAGTGGGAAAAAGAAATTCAAATT 60.018 34.615 0.00 0.00 0.00 1.82
572 589 5.466393 CGCAGTGGGAAAAAGAAATTCAAAT 59.534 36.000 0.00 0.00 0.00 2.32
586 632 0.981183 AGGTCAATACGCAGTGGGAA 59.019 50.000 14.98 0.00 45.73 3.97
588 634 0.462047 GGAGGTCAATACGCAGTGGG 60.462 60.000 5.50 5.50 45.73 4.61
687 1096 2.469516 CGACCCCTGTTTATGCCGC 61.470 63.158 0.00 0.00 0.00 6.53
704 1113 2.096713 GCTTGCTGTAACAGTGAGAACG 60.097 50.000 0.00 0.00 33.43 3.95
713 1122 1.001048 AGACGTACGCTTGCTGTAACA 60.001 47.619 16.72 0.00 0.00 2.41
724 1133 1.334054 ATTGTGAACGAGACGTACGC 58.666 50.000 16.72 8.42 39.99 4.42
813 1222 1.219522 GCGTGCACGGAGTTGTACTT 61.220 55.000 37.47 0.00 41.61 2.24
988 1399 1.068127 GATGGCCATGTTTGATCAGGC 59.932 52.381 26.56 13.22 44.48 4.85
1085 1499 3.189287 CCTTGCTACCATTGACAAGTCAC 59.811 47.826 1.73 0.00 39.66 3.67
1101 1515 1.304713 CCAACCCTCATGCCTTGCT 60.305 57.895 0.00 0.00 0.00 3.91
1158 1572 0.108585 TCTCAAACCTCTGCGCCTTT 59.891 50.000 4.18 0.00 0.00 3.11
1183 1597 2.868583 CGATGAACCTGACATTAGCCTG 59.131 50.000 0.00 0.00 0.00 4.85
1225 1639 0.037877 ATGCTGAGCCAGAACTTGCT 59.962 50.000 0.23 0.06 41.42 3.91
1257 1671 4.449131 TGAACTCATCATTGCTGAGATCC 58.551 43.478 21.10 11.15 42.22 3.36
1488 1941 5.163824 CGCAGTCAATCACACACATTCTAAT 60.164 40.000 0.00 0.00 0.00 1.73
1510 1964 3.764885 ACCTGCAAATAATTCAGTCGC 57.235 42.857 0.00 0.00 0.00 5.19
1512 1966 6.215845 ACAACAACCTGCAAATAATTCAGTC 58.784 36.000 0.00 0.00 0.00 3.51
1513 1967 6.160576 ACAACAACCTGCAAATAATTCAGT 57.839 33.333 0.00 0.00 0.00 3.41
1515 1969 5.757320 CCAACAACAACCTGCAAATAATTCA 59.243 36.000 0.00 0.00 0.00 2.57
1516 1970 5.179182 CCCAACAACAACCTGCAAATAATTC 59.821 40.000 0.00 0.00 0.00 2.17
1608 2067 3.508793 CACAATCCACCAATTCTTGCTCT 59.491 43.478 0.00 0.00 0.00 4.09
1863 2322 1.620819 GTCATATCGCCTCCATCCACT 59.379 52.381 0.00 0.00 0.00 4.00
1968 2427 8.284945 ACCAATACTTTGTATCGTCACTAGTA 57.715 34.615 0.00 0.00 0.00 1.82
1995 2454 3.509442 TGTGCCCCAAGAATTCTTCAAT 58.491 40.909 17.91 0.00 33.11 2.57
2019 2478 7.406620 TCTTAAATATCCATTCTCACCCCAT 57.593 36.000 0.00 0.00 0.00 4.00
2126 2585 7.503230 TCATATCTGTGTGAATATGTGGCATTT 59.497 33.333 0.00 0.00 0.00 2.32
2184 2645 8.071967 GCACACATATGTACTGTAATACTACGA 58.928 37.037 8.32 0.00 36.72 3.43
2185 2646 8.074370 AGCACACATATGTACTGTAATACTACG 58.926 37.037 8.32 0.00 36.72 3.51
2193 2654 9.443323 AATTTACAAGCACACATATGTACTGTA 57.557 29.630 8.32 8.82 36.72 2.74
2194 2655 7.921786 ATTTACAAGCACACATATGTACTGT 57.078 32.000 8.32 9.71 36.72 3.55
2196 2657 8.335532 ACAATTTACAAGCACACATATGTACT 57.664 30.769 8.32 3.76 36.72 2.73
2291 2754 9.206870 CCTTCTTGCAATGTGTTTTATATTTGT 57.793 29.630 0.00 0.00 0.00 2.83
2292 2755 8.658609 CCCTTCTTGCAATGTGTTTTATATTTG 58.341 33.333 0.00 0.00 0.00 2.32
2293 2756 7.334171 GCCCTTCTTGCAATGTGTTTTATATTT 59.666 33.333 0.00 0.00 0.00 1.40
2294 2757 6.818142 GCCCTTCTTGCAATGTGTTTTATATT 59.182 34.615 0.00 0.00 0.00 1.28
2295 2758 6.340522 GCCCTTCTTGCAATGTGTTTTATAT 58.659 36.000 0.00 0.00 0.00 0.86
2303 2766 0.813184 ATCGCCCTTCTTGCAATGTG 59.187 50.000 0.00 0.00 0.00 3.21
2304 2767 2.418368 TATCGCCCTTCTTGCAATGT 57.582 45.000 0.00 0.00 0.00 2.71
2318 2781 5.049818 CCTTCCATTGAACTCTTCATATCGC 60.050 44.000 0.00 0.00 39.84 4.58
2328 2791 3.756117 ACAACCTCCTTCCATTGAACTC 58.244 45.455 0.00 0.00 0.00 3.01
2337 2800 3.487120 ACAAGTGTACAACCTCCTTCC 57.513 47.619 0.00 0.00 0.00 3.46
2344 2807 5.856455 GTGCAATCAATACAAGTGTACAACC 59.144 40.000 0.00 0.00 32.72 3.77
2351 2814 4.685628 GGTTTGGTGCAATCAATACAAGTG 59.314 41.667 4.83 0.00 0.00 3.16
2404 2867 2.039624 AGCGGACTCCACTCCCAT 59.960 61.111 0.00 0.00 0.00 4.00
2405 2868 2.680352 GAGCGGACTCCACTCCCA 60.680 66.667 1.99 0.00 36.90 4.37
2406 2869 3.827898 CGAGCGGACTCCACTCCC 61.828 72.222 7.42 0.00 40.03 4.30
2408 2871 3.444805 AGCGAGCGGACTCCACTC 61.445 66.667 3.27 3.27 40.03 3.51
2410 2873 3.282745 TTCAGCGAGCGGACTCCAC 62.283 63.158 0.00 0.00 40.03 4.02
2412 2875 2.202676 CTTCAGCGAGCGGACTCC 60.203 66.667 0.00 0.00 40.03 3.85
2423 2886 0.449388 CCAACATTCGAGGCTTCAGC 59.551 55.000 0.00 0.00 41.14 4.26
2425 2888 2.555123 GCCAACATTCGAGGCTTCA 58.445 52.632 5.43 0.00 44.92 3.02
2434 2897 2.258286 GCGGTGGTGCCAACATTC 59.742 61.111 7.08 0.00 36.97 2.67
2450 2913 2.172293 AGATCTTGAAGACCATCAGGGC 59.828 50.000 0.00 0.00 46.64 5.19
2451 2914 5.454471 CCTTAGATCTTGAAGACCATCAGGG 60.454 48.000 0.00 0.00 44.81 4.45
2452 2915 5.130145 ACCTTAGATCTTGAAGACCATCAGG 59.870 44.000 0.00 2.60 42.21 3.86
2459 2922 7.589958 TCTCCATACCTTAGATCTTGAAGAC 57.410 40.000 0.00 0.00 0.00 3.01
2480 2943 1.836802 AGAAGGTGCCAAGGAGATCTC 59.163 52.381 14.75 14.75 0.00 2.75
2485 2948 0.035630 CAGGAGAAGGTGCCAAGGAG 60.036 60.000 0.00 0.00 0.00 3.69
2488 2951 3.993535 GCAGGAGAAGGTGCCAAG 58.006 61.111 0.00 0.00 33.29 3.61
2494 2957 1.920835 GTCAGGGGCAGGAGAAGGT 60.921 63.158 0.00 0.00 0.00 3.50
2497 2960 1.276622 GTTAGTCAGGGGCAGGAGAA 58.723 55.000 0.00 0.00 0.00 2.87
2502 2972 4.913126 GACGTTAGTCAGGGGCAG 57.087 61.111 0.00 0.00 46.32 4.85
2510 2980 3.693578 AGCCAAGTACTAGGACGTTAGTC 59.306 47.826 3.22 0.00 46.34 2.59
2513 2983 4.338879 AGAAGCCAAGTACTAGGACGTTA 58.661 43.478 0.00 0.00 0.00 3.18
2533 3003 4.097418 GGCTGGATAAAGATAGGGCTAGA 58.903 47.826 0.00 0.00 0.00 2.43
2540 3010 4.238514 GCACGTAGGCTGGATAAAGATAG 58.761 47.826 0.00 0.00 0.00 2.08
2544 3014 1.134521 TGGCACGTAGGCTGGATAAAG 60.135 52.381 0.00 0.00 44.55 1.85
2551 3021 1.815421 GTCCATGGCACGTAGGCTG 60.815 63.158 6.96 7.92 44.55 4.85
2552 3022 2.584608 GTCCATGGCACGTAGGCT 59.415 61.111 6.96 0.00 44.55 4.58
2553 3023 2.513897 GGTCCATGGCACGTAGGC 60.514 66.667 6.96 0.00 44.50 3.93
2555 3025 1.048601 ATAGGGTCCATGGCACGTAG 58.951 55.000 6.96 0.00 0.00 3.51
2557 3027 1.140252 GTAATAGGGTCCATGGCACGT 59.860 52.381 6.96 6.41 0.00 4.49
2558 3028 1.542547 GGTAATAGGGTCCATGGCACG 60.543 57.143 6.96 0.00 0.00 5.34
2564 3034 2.236766 CGAGACGGTAATAGGGTCCAT 58.763 52.381 0.00 0.00 0.00 3.41
2567 3037 3.790152 AAACGAGACGGTAATAGGGTC 57.210 47.619 0.00 0.00 0.00 4.46
2573 3043 4.255301 TGCCATAAAAACGAGACGGTAAT 58.745 39.130 0.00 0.00 0.00 1.89
2577 3047 2.418628 ACATGCCATAAAAACGAGACGG 59.581 45.455 0.00 0.00 0.00 4.79
2583 3053 5.514274 AAGGGATACATGCCATAAAAACG 57.486 39.130 2.38 0.00 41.29 3.60
2590 3060 5.653255 AGAAGTTAAGGGATACATGCCAT 57.347 39.130 2.38 0.00 41.29 4.40
2599 3069 6.349897 AGGAGAGTCTAGAAGTTAAGGGAT 57.650 41.667 0.00 0.00 0.00 3.85
2601 3071 7.562088 ACAATAGGAGAGTCTAGAAGTTAAGGG 59.438 40.741 0.00 0.00 0.00 3.95
2613 3083 5.552178 GTCCAACAAACAATAGGAGAGTCT 58.448 41.667 0.00 0.00 0.00 3.24
2614 3084 4.389077 CGTCCAACAAACAATAGGAGAGTC 59.611 45.833 0.00 0.00 0.00 3.36
2619 3089 3.142951 CACCGTCCAACAAACAATAGGA 58.857 45.455 0.00 0.00 0.00 2.94
2625 3095 1.658686 GCACCACCGTCCAACAAACA 61.659 55.000 0.00 0.00 0.00 2.83
2683 3154 8.960591 CAACACTTATCAGGGTCATAGATTTTT 58.039 33.333 0.00 0.00 34.53 1.94
2684 3155 8.328758 TCAACACTTATCAGGGTCATAGATTTT 58.671 33.333 0.00 0.00 34.53 1.82
2685 3156 7.861629 TCAACACTTATCAGGGTCATAGATTT 58.138 34.615 0.00 0.00 34.53 2.17
2686 3157 7.437713 TCAACACTTATCAGGGTCATAGATT 57.562 36.000 0.00 0.00 34.53 2.40
2687 3158 7.275920 GTTCAACACTTATCAGGGTCATAGAT 58.724 38.462 0.00 0.00 34.53 1.98
2688 3159 6.627287 CGTTCAACACTTATCAGGGTCATAGA 60.627 42.308 0.00 0.00 34.53 1.98
2689 3160 5.520288 CGTTCAACACTTATCAGGGTCATAG 59.480 44.000 0.00 0.00 34.53 2.23
2690 3161 5.046878 ACGTTCAACACTTATCAGGGTCATA 60.047 40.000 0.00 0.00 34.53 2.15
2691 3162 4.253685 CGTTCAACACTTATCAGGGTCAT 58.746 43.478 0.00 0.00 34.53 3.06
2692 3163 3.070446 ACGTTCAACACTTATCAGGGTCA 59.930 43.478 0.00 0.00 34.53 4.02
2693 3164 3.660865 ACGTTCAACACTTATCAGGGTC 58.339 45.455 0.00 0.00 34.53 4.46
2694 3165 3.070446 TGACGTTCAACACTTATCAGGGT 59.930 43.478 0.00 0.00 38.88 4.34
2695 3166 3.659786 TGACGTTCAACACTTATCAGGG 58.340 45.455 0.00 0.00 0.00 4.45
2696 3167 3.679980 CCTGACGTTCAACACTTATCAGG 59.320 47.826 3.15 3.15 39.47 3.86
2697 3168 4.307432 ACCTGACGTTCAACACTTATCAG 58.693 43.478 0.00 0.00 31.73 2.90
2698 3169 4.330944 ACCTGACGTTCAACACTTATCA 57.669 40.909 0.00 0.00 0.00 2.15
2699 3170 4.322804 CGTACCTGACGTTCAACACTTATC 59.677 45.833 0.00 0.00 46.86 1.75
2700 3171 4.232221 CGTACCTGACGTTCAACACTTAT 58.768 43.478 0.00 0.00 46.86 1.73
2701 3172 3.631144 CGTACCTGACGTTCAACACTTA 58.369 45.455 0.00 0.00 46.86 2.24
2702 3173 2.466846 CGTACCTGACGTTCAACACTT 58.533 47.619 0.00 0.00 46.86 3.16
2703 3174 2.129823 CGTACCTGACGTTCAACACT 57.870 50.000 0.00 0.00 46.86 3.55
2713 3184 1.067846 TGACATGTGCTCGTACCTGAC 60.068 52.381 1.15 0.00 0.00 3.51
2714 3185 1.253100 TGACATGTGCTCGTACCTGA 58.747 50.000 1.15 0.00 0.00 3.86
2715 3186 1.726791 GTTGACATGTGCTCGTACCTG 59.273 52.381 1.15 0.00 0.00 4.00
2716 3187 1.618837 AGTTGACATGTGCTCGTACCT 59.381 47.619 1.15 0.00 0.00 3.08
2717 3188 2.080286 AGTTGACATGTGCTCGTACC 57.920 50.000 1.15 0.00 0.00 3.34
2718 3189 3.057019 TGAAGTTGACATGTGCTCGTAC 58.943 45.455 1.15 0.00 0.00 3.67
2719 3190 3.378911 TGAAGTTGACATGTGCTCGTA 57.621 42.857 1.15 0.00 0.00 3.43
2720 3191 2.238942 TGAAGTTGACATGTGCTCGT 57.761 45.000 1.15 0.00 0.00 4.18
2721 3192 3.291585 GTTTGAAGTTGACATGTGCTCG 58.708 45.455 1.15 0.00 0.00 5.03
2722 3193 3.242739 ACGTTTGAAGTTGACATGTGCTC 60.243 43.478 1.15 0.00 0.00 4.26
2723 3194 2.682856 ACGTTTGAAGTTGACATGTGCT 59.317 40.909 1.15 0.00 0.00 4.40
2724 3195 3.065019 ACGTTTGAAGTTGACATGTGC 57.935 42.857 1.15 0.00 0.00 4.57
2725 3196 6.388259 AAAAACGTTTGAAGTTGACATGTG 57.612 33.333 15.46 0.00 31.43 3.21
2726 3197 7.221838 CCATAAAAACGTTTGAAGTTGACATGT 59.778 33.333 15.46 0.00 31.43 3.21
2727 3198 7.554732 CCATAAAAACGTTTGAAGTTGACATG 58.445 34.615 15.46 5.99 31.43 3.21
2728 3199 6.200097 GCCATAAAAACGTTTGAAGTTGACAT 59.800 34.615 15.46 0.00 31.43 3.06
2729 3200 5.517054 GCCATAAAAACGTTTGAAGTTGACA 59.483 36.000 15.46 0.00 31.43 3.58
2730 3201 5.517054 TGCCATAAAAACGTTTGAAGTTGAC 59.483 36.000 15.46 2.20 31.43 3.18
2731 3202 5.651530 TGCCATAAAAACGTTTGAAGTTGA 58.348 33.333 15.46 0.00 31.43 3.18
2732 3203 5.957910 TGCCATAAAAACGTTTGAAGTTG 57.042 34.783 15.46 8.26 31.43 3.16
2733 3204 6.969828 TTTGCCATAAAAACGTTTGAAGTT 57.030 29.167 15.46 7.60 0.00 2.66
2734 3205 7.546778 AATTTGCCATAAAAACGTTTGAAGT 57.453 28.000 15.46 3.30 0.00 3.01
2735 3206 9.579610 CTAAATTTGCCATAAAAACGTTTGAAG 57.420 29.630 15.46 5.26 0.00 3.02
2736 3207 9.099454 ACTAAATTTGCCATAAAAACGTTTGAA 57.901 25.926 15.46 6.16 0.00 2.69
2737 3208 8.649973 ACTAAATTTGCCATAAAAACGTTTGA 57.350 26.923 15.46 6.32 0.00 2.69
2741 3212 8.652463 GCATAACTAAATTTGCCATAAAAACGT 58.348 29.630 0.00 0.00 0.00 3.99
2742 3213 7.838879 CGCATAACTAAATTTGCCATAAAAACG 59.161 33.333 0.00 0.00 0.00 3.60
2743 3214 8.865001 TCGCATAACTAAATTTGCCATAAAAAC 58.135 29.630 0.00 0.00 0.00 2.43
2744 3215 8.988064 TCGCATAACTAAATTTGCCATAAAAA 57.012 26.923 0.00 0.00 0.00 1.94
2745 3216 7.704472 CCTCGCATAACTAAATTTGCCATAAAA 59.296 33.333 0.00 0.00 0.00 1.52
2746 3217 7.067615 TCCTCGCATAACTAAATTTGCCATAAA 59.932 33.333 0.00 0.00 0.00 1.40
2747 3218 6.544197 TCCTCGCATAACTAAATTTGCCATAA 59.456 34.615 0.00 0.00 0.00 1.90
2748 3219 6.058833 TCCTCGCATAACTAAATTTGCCATA 58.941 36.000 0.00 0.00 0.00 2.74
2749 3220 4.887071 TCCTCGCATAACTAAATTTGCCAT 59.113 37.500 0.00 0.00 0.00 4.40
2750 3221 4.265893 TCCTCGCATAACTAAATTTGCCA 58.734 39.130 0.00 0.00 0.00 4.92
2751 3222 4.893424 TCCTCGCATAACTAAATTTGCC 57.107 40.909 0.00 0.00 0.00 4.52
2752 3223 5.215160 CCATCCTCGCATAACTAAATTTGC 58.785 41.667 0.00 0.00 0.00 3.68
2753 3224 5.215160 GCCATCCTCGCATAACTAAATTTG 58.785 41.667 0.00 0.00 0.00 2.32
2754 3225 4.278419 GGCCATCCTCGCATAACTAAATTT 59.722 41.667 0.00 0.00 0.00 1.82
2755 3226 3.821033 GGCCATCCTCGCATAACTAAATT 59.179 43.478 0.00 0.00 0.00 1.82
2756 3227 3.073062 AGGCCATCCTCGCATAACTAAAT 59.927 43.478 5.01 0.00 38.72 1.40
2757 3228 2.438021 AGGCCATCCTCGCATAACTAAA 59.562 45.455 5.01 0.00 38.72 1.85
2758 3229 2.047061 AGGCCATCCTCGCATAACTAA 58.953 47.619 5.01 0.00 38.72 2.24
2759 3230 1.717032 AGGCCATCCTCGCATAACTA 58.283 50.000 5.01 0.00 38.72 2.24
2760 3231 0.839946 AAGGCCATCCTCGCATAACT 59.160 50.000 5.01 0.00 43.40 2.24
2761 3232 1.680338 AAAGGCCATCCTCGCATAAC 58.320 50.000 5.01 0.00 43.40 1.89
2762 3233 2.438021 ACTAAAGGCCATCCTCGCATAA 59.562 45.455 5.01 0.00 43.40 1.90
2763 3234 2.047061 ACTAAAGGCCATCCTCGCATA 58.953 47.619 5.01 0.00 43.40 3.14
2764 3235 0.839946 ACTAAAGGCCATCCTCGCAT 59.160 50.000 5.01 0.00 43.40 4.73
2765 3236 0.618458 AACTAAAGGCCATCCTCGCA 59.382 50.000 5.01 0.00 43.40 5.10
2766 3237 1.017387 CAACTAAAGGCCATCCTCGC 58.983 55.000 5.01 0.00 43.40 5.03
2767 3238 1.668419 CCAACTAAAGGCCATCCTCG 58.332 55.000 5.01 0.00 43.40 4.63
2768 3239 1.393603 GCCAACTAAAGGCCATCCTC 58.606 55.000 5.01 0.00 46.50 3.71
2769 3240 3.596362 GCCAACTAAAGGCCATCCT 57.404 52.632 5.01 0.00 46.50 3.24
2776 3247 2.557924 TGACATGCTTGCCAACTAAAGG 59.442 45.455 0.00 0.00 0.00 3.11
2777 3248 3.921119 TGACATGCTTGCCAACTAAAG 57.079 42.857 0.00 0.00 0.00 1.85
2778 3249 3.976169 GTTGACATGCTTGCCAACTAAA 58.024 40.909 19.93 0.00 41.43 1.85
2779 3250 3.641437 GTTGACATGCTTGCCAACTAA 57.359 42.857 19.93 0.00 41.43 2.24
2782 3253 2.397549 GAAGTTGACATGCTTGCCAAC 58.602 47.619 19.71 19.71 44.00 3.77
2783 3254 1.340889 GGAAGTTGACATGCTTGCCAA 59.659 47.619 0.00 0.00 0.00 4.52
2784 3255 0.961019 GGAAGTTGACATGCTTGCCA 59.039 50.000 0.00 0.00 0.00 4.92
2785 3256 0.961019 TGGAAGTTGACATGCTTGCC 59.039 50.000 0.00 0.00 33.07 4.52
2786 3257 2.602878 CATGGAAGTTGACATGCTTGC 58.397 47.619 0.00 5.31 38.15 4.01
2791 3262 5.633830 ACTAAAGCATGGAAGTTGACATG 57.366 39.130 11.11 11.11 45.49 3.21
2796 3267 3.578688 GCCAACTAAAGCATGGAAGTTG 58.421 45.455 7.00 7.00 45.33 3.16
2797 3268 2.562738 GGCCAACTAAAGCATGGAAGTT 59.437 45.455 0.00 0.00 36.27 2.66
2798 3269 2.171003 GGCCAACTAAAGCATGGAAGT 58.829 47.619 0.00 0.00 36.27 3.01
2799 3270 1.478105 GGGCCAACTAAAGCATGGAAG 59.522 52.381 4.39 0.00 36.27 3.46
2800 3271 1.077005 AGGGCCAACTAAAGCATGGAA 59.923 47.619 6.18 0.00 36.27 3.53
2801 3272 0.704076 AGGGCCAACTAAAGCATGGA 59.296 50.000 6.18 0.00 36.27 3.41
2802 3273 2.301346 CTAGGGCCAACTAAAGCATGG 58.699 52.381 6.18 0.00 37.29 3.66
2803 3274 2.301346 CCTAGGGCCAACTAAAGCATG 58.699 52.381 6.18 0.00 0.00 4.06
2804 3275 1.410224 GCCTAGGGCCAACTAAAGCAT 60.410 52.381 11.72 0.00 44.06 3.79
2805 3276 0.034477 GCCTAGGGCCAACTAAAGCA 60.034 55.000 11.72 0.00 44.06 3.91
2806 3277 2.795165 GCCTAGGGCCAACTAAAGC 58.205 57.895 11.72 0.02 44.06 3.51
2822 3293 0.830648 TGAGCAGGTATAGGTGTGCC 59.169 55.000 0.00 0.00 36.54 5.01
2823 3294 1.808133 GCTGAGCAGGTATAGGTGTGC 60.808 57.143 0.00 0.00 36.10 4.57
2824 3295 1.536922 CGCTGAGCAGGTATAGGTGTG 60.537 57.143 4.88 0.00 0.00 3.82
2825 3296 0.747255 CGCTGAGCAGGTATAGGTGT 59.253 55.000 4.88 0.00 0.00 4.16
2826 3297 1.032794 TCGCTGAGCAGGTATAGGTG 58.967 55.000 4.88 0.00 0.00 4.00
2827 3298 1.033574 GTCGCTGAGCAGGTATAGGT 58.966 55.000 4.88 0.00 0.00 3.08
2828 3299 0.315568 GGTCGCTGAGCAGGTATAGG 59.684 60.000 4.88 0.00 0.00 2.57
2829 3300 0.315568 GGGTCGCTGAGCAGGTATAG 59.684 60.000 4.88 0.00 0.00 1.31
2830 3301 1.113517 GGGGTCGCTGAGCAGGTATA 61.114 60.000 4.88 0.00 0.00 1.47
2831 3302 2.435693 GGGGTCGCTGAGCAGGTAT 61.436 63.158 4.88 0.00 0.00 2.73
2832 3303 3.075005 GGGGTCGCTGAGCAGGTA 61.075 66.667 4.88 0.00 0.00 3.08
2835 3306 3.842923 ATCGGGGTCGCTGAGCAG 61.843 66.667 4.88 0.00 36.13 4.24
2836 3307 4.147449 CATCGGGGTCGCTGAGCA 62.147 66.667 4.88 0.00 34.81 4.26
2838 3309 4.899239 GGCATCGGGGTCGCTGAG 62.899 72.222 4.58 0.00 34.81 3.35
2860 3331 1.225704 GTGGAGGGGCAGAAGATGG 59.774 63.158 0.00 0.00 0.00 3.51
2861 3332 0.622665 AAGTGGAGGGGCAGAAGATG 59.377 55.000 0.00 0.00 0.00 2.90
2862 3333 1.283321 GAAAGTGGAGGGGCAGAAGAT 59.717 52.381 0.00 0.00 0.00 2.40
2863 3334 0.693049 GAAAGTGGAGGGGCAGAAGA 59.307 55.000 0.00 0.00 0.00 2.87
2864 3335 0.695347 AGAAAGTGGAGGGGCAGAAG 59.305 55.000 0.00 0.00 0.00 2.85
2865 3336 1.909302 CTAGAAAGTGGAGGGGCAGAA 59.091 52.381 0.00 0.00 0.00 3.02
2866 3337 1.078823 TCTAGAAAGTGGAGGGGCAGA 59.921 52.381 0.00 0.00 0.00 4.26
2867 3338 1.208293 GTCTAGAAAGTGGAGGGGCAG 59.792 57.143 0.00 0.00 0.00 4.85
2868 3339 1.276622 GTCTAGAAAGTGGAGGGGCA 58.723 55.000 0.00 0.00 0.00 5.36
2869 3340 0.542333 GGTCTAGAAAGTGGAGGGGC 59.458 60.000 0.00 0.00 0.00 5.80
2870 3341 0.824759 CGGTCTAGAAAGTGGAGGGG 59.175 60.000 0.00 0.00 0.00 4.79
2871 3342 1.558233 ACGGTCTAGAAAGTGGAGGG 58.442 55.000 0.00 0.00 0.00 4.30
2872 3343 2.353803 CCAACGGTCTAGAAAGTGGAGG 60.354 54.545 0.00 0.00 0.00 4.30
2873 3344 2.931320 GCCAACGGTCTAGAAAGTGGAG 60.931 54.545 14.24 4.02 0.00 3.86
2874 3345 1.001633 GCCAACGGTCTAGAAAGTGGA 59.998 52.381 14.24 0.00 0.00 4.02
2875 3346 1.439679 GCCAACGGTCTAGAAAGTGG 58.560 55.000 0.00 1.27 0.00 4.00
2876 3347 1.068474 CGCCAACGGTCTAGAAAGTG 58.932 55.000 0.00 0.00 34.97 3.16
2877 3348 0.963962 TCGCCAACGGTCTAGAAAGT 59.036 50.000 0.00 0.00 40.63 2.66
2878 3349 1.347320 GTCGCCAACGGTCTAGAAAG 58.653 55.000 0.00 0.00 40.63 2.62
2879 3350 3.502237 GTCGCCAACGGTCTAGAAA 57.498 52.632 0.00 0.00 40.63 2.52
2889 3360 1.885850 AAGTGTGTCCGTCGCCAAC 60.886 57.895 0.00 0.00 0.00 3.77
2890 3361 1.885388 CAAGTGTGTCCGTCGCCAA 60.885 57.895 0.00 0.00 0.00 4.52
2891 3362 2.279851 CAAGTGTGTCCGTCGCCA 60.280 61.111 0.00 0.00 0.00 5.69
2892 3363 3.712881 GCAAGTGTGTCCGTCGCC 61.713 66.667 0.00 0.00 0.00 5.54
2893 3364 3.712881 GGCAAGTGTGTCCGTCGC 61.713 66.667 0.00 0.00 0.00 5.19
2894 3365 2.022129 GAGGCAAGTGTGTCCGTCG 61.022 63.158 0.00 0.00 0.00 5.12
2895 3366 0.249911 AAGAGGCAAGTGTGTCCGTC 60.250 55.000 0.00 0.00 0.00 4.79
2896 3367 0.249911 GAAGAGGCAAGTGTGTCCGT 60.250 55.000 0.00 0.00 0.00 4.69
2897 3368 0.034059 AGAAGAGGCAAGTGTGTCCG 59.966 55.000 0.00 0.00 0.00 4.79
2898 3369 1.517242 CAGAAGAGGCAAGTGTGTCC 58.483 55.000 0.00 0.00 0.00 4.02
2899 3370 1.202698 ACCAGAAGAGGCAAGTGTGTC 60.203 52.381 0.00 0.00 0.00 3.67
2900 3371 0.839946 ACCAGAAGAGGCAAGTGTGT 59.160 50.000 0.00 0.00 0.00 3.72
2901 3372 1.071385 AGACCAGAAGAGGCAAGTGTG 59.929 52.381 0.00 0.00 0.00 3.82
2902 3373 1.071385 CAGACCAGAAGAGGCAAGTGT 59.929 52.381 0.00 0.00 0.00 3.55
2903 3374 1.345741 TCAGACCAGAAGAGGCAAGTG 59.654 52.381 0.00 0.00 0.00 3.16
2904 3375 1.722034 TCAGACCAGAAGAGGCAAGT 58.278 50.000 0.00 0.00 0.00 3.16
2905 3376 2.419851 GGATCAGACCAGAAGAGGCAAG 60.420 54.545 0.00 0.00 0.00 4.01
2906 3377 1.556911 GGATCAGACCAGAAGAGGCAA 59.443 52.381 0.00 0.00 0.00 4.52
2907 3378 1.198713 GGATCAGACCAGAAGAGGCA 58.801 55.000 0.00 0.00 0.00 4.75
2908 3379 1.494960 AGGATCAGACCAGAAGAGGC 58.505 55.000 0.00 0.00 0.00 4.70
2909 3380 2.170187 CCAAGGATCAGACCAGAAGAGG 59.830 54.545 0.00 0.00 0.00 3.69
2910 3381 3.102972 TCCAAGGATCAGACCAGAAGAG 58.897 50.000 0.00 0.00 0.00 2.85
2911 3382 3.190383 TCCAAGGATCAGACCAGAAGA 57.810 47.619 0.00 0.00 0.00 2.87
2912 3383 4.080695 TCAATCCAAGGATCAGACCAGAAG 60.081 45.833 1.37 0.00 33.08 2.85
2913 3384 3.845992 TCAATCCAAGGATCAGACCAGAA 59.154 43.478 1.37 0.00 33.08 3.02
2914 3385 3.453868 TCAATCCAAGGATCAGACCAGA 58.546 45.455 1.37 0.00 33.08 3.86
2915 3386 3.920231 TCAATCCAAGGATCAGACCAG 57.080 47.619 1.37 0.00 33.08 4.00
2916 3387 3.117776 CCATCAATCCAAGGATCAGACCA 60.118 47.826 1.37 0.00 33.08 4.02
2917 3388 3.484407 CCATCAATCCAAGGATCAGACC 58.516 50.000 1.37 0.00 33.08 3.85
2918 3389 2.883386 GCCATCAATCCAAGGATCAGAC 59.117 50.000 1.37 0.00 33.08 3.51
2919 3390 2.158564 GGCCATCAATCCAAGGATCAGA 60.159 50.000 0.00 4.55 33.08 3.27
2920 3391 2.236766 GGCCATCAATCCAAGGATCAG 58.763 52.381 0.00 0.00 33.08 2.90
2921 3392 1.570024 TGGCCATCAATCCAAGGATCA 59.430 47.619 0.00 0.00 33.08 2.92
2922 3393 2.236766 CTGGCCATCAATCCAAGGATC 58.763 52.381 5.51 0.00 33.08 3.36
2923 3394 1.572415 ACTGGCCATCAATCCAAGGAT 59.428 47.619 5.51 0.00 36.23 3.24
2924 3395 1.002069 ACTGGCCATCAATCCAAGGA 58.998 50.000 5.51 0.00 30.98 3.36
2925 3396 1.064166 AGACTGGCCATCAATCCAAGG 60.064 52.381 5.51 0.00 30.98 3.61
2926 3397 2.022195 CAGACTGGCCATCAATCCAAG 58.978 52.381 5.51 0.00 30.98 3.61
2927 3398 1.355381 ACAGACTGGCCATCAATCCAA 59.645 47.619 5.51 0.00 30.98 3.53
2928 3399 0.994247 ACAGACTGGCCATCAATCCA 59.006 50.000 5.51 0.00 0.00 3.41
2929 3400 1.065199 TGACAGACTGGCCATCAATCC 60.065 52.381 5.51 0.00 0.00 3.01
2930 3401 2.408271 TGACAGACTGGCCATCAATC 57.592 50.000 5.51 8.51 0.00 2.67
2931 3402 2.744166 CGATGACAGACTGGCCATCAAT 60.744 50.000 25.99 8.74 33.91 2.57
2932 3403 1.405933 CGATGACAGACTGGCCATCAA 60.406 52.381 25.99 4.74 33.91 2.57
2933 3404 0.176449 CGATGACAGACTGGCCATCA 59.824 55.000 25.99 7.27 33.91 3.07
2934 3405 0.461548 TCGATGACAGACTGGCCATC 59.538 55.000 20.98 20.98 32.25 3.51
2935 3406 0.176680 GTCGATGACAGACTGGCCAT 59.823 55.000 5.51 8.96 35.84 4.40
2936 3407 1.184970 TGTCGATGACAGACTGGCCA 61.185 55.000 4.71 4.71 37.67 5.36
2937 3408 0.176680 ATGTCGATGACAGACTGGCC 59.823 55.000 5.67 0.00 46.04 5.36
2938 3409 1.565305 GATGTCGATGACAGACTGGC 58.435 55.000 7.51 3.88 46.04 4.85
2939 3410 1.832600 CGATGTCGATGACAGACTGG 58.167 55.000 7.51 0.00 46.04 4.00
2940 3411 1.195347 GCGATGTCGATGACAGACTG 58.805 55.000 6.60 0.00 46.04 3.51
2941 3412 0.101399 GGCGATGTCGATGACAGACT 59.899 55.000 6.60 0.00 46.04 3.24
2942 3413 0.872021 GGGCGATGTCGATGACAGAC 60.872 60.000 6.60 2.14 46.04 3.51
2943 3414 1.437573 GGGCGATGTCGATGACAGA 59.562 57.895 6.60 0.00 46.04 3.41
2944 3415 1.592669 GGGGCGATGTCGATGACAG 60.593 63.158 6.60 0.00 46.04 3.51
2945 3416 2.499205 GGGGCGATGTCGATGACA 59.501 61.111 6.60 1.65 46.90 3.58
2946 3417 2.658593 CGGGGCGATGTCGATGAC 60.659 66.667 6.60 0.00 43.02 3.06
2947 3418 2.717044 AACGGGGCGATGTCGATGA 61.717 57.895 6.60 0.00 43.02 2.92
2948 3419 2.202878 AACGGGGCGATGTCGATG 60.203 61.111 6.60 0.00 43.02 3.84
2949 3420 2.202878 CAACGGGGCGATGTCGAT 60.203 61.111 6.60 0.00 43.02 3.59
2950 3421 3.229156 AACAACGGGGCGATGTCGA 62.229 57.895 6.60 0.00 41.62 4.20
2951 3422 2.740826 AACAACGGGGCGATGTCG 60.741 61.111 0.00 0.00 41.62 4.35
2952 3423 1.024579 ATCAACAACGGGGCGATGTC 61.025 55.000 0.00 0.00 41.62 3.06
2953 3424 1.002624 ATCAACAACGGGGCGATGT 60.003 52.632 0.00 0.00 44.10 3.06
2954 3425 1.714899 GGATCAACAACGGGGCGATG 61.715 60.000 0.00 0.00 35.82 3.84
2955 3426 1.451387 GGATCAACAACGGGGCGAT 60.451 57.895 0.00 0.00 0.00 4.58
2956 3427 2.046700 GGATCAACAACGGGGCGA 60.047 61.111 0.00 0.00 0.00 5.54
2957 3428 2.046314 AGGATCAACAACGGGGCG 60.046 61.111 0.00 0.00 0.00 6.13
2958 3429 0.893727 AACAGGATCAACAACGGGGC 60.894 55.000 0.00 0.00 0.00 5.80
2959 3430 0.881118 CAACAGGATCAACAACGGGG 59.119 55.000 0.00 0.00 0.00 5.73
2960 3431 0.881118 CCAACAGGATCAACAACGGG 59.119 55.000 0.00 0.00 0.00 5.28
2961 3432 1.535462 GACCAACAGGATCAACAACGG 59.465 52.381 0.00 0.00 0.00 4.44
2962 3433 1.535462 GGACCAACAGGATCAACAACG 59.465 52.381 0.00 0.00 0.00 4.10
2963 3434 1.886542 GGGACCAACAGGATCAACAAC 59.113 52.381 0.00 0.00 0.00 3.32
2964 3435 1.544537 CGGGACCAACAGGATCAACAA 60.545 52.381 0.00 0.00 0.00 2.83
2965 3436 0.036164 CGGGACCAACAGGATCAACA 59.964 55.000 0.00 0.00 0.00 3.33
2966 3437 0.036306 ACGGGACCAACAGGATCAAC 59.964 55.000 0.00 0.00 0.00 3.18
2967 3438 0.036164 CACGGGACCAACAGGATCAA 59.964 55.000 0.00 0.00 0.00 2.57
2968 3439 1.676968 CACGGGACCAACAGGATCA 59.323 57.895 0.00 0.00 0.00 2.92
2969 3440 1.745489 GCACGGGACCAACAGGATC 60.745 63.158 0.00 0.00 0.00 3.36
2970 3441 2.351276 GCACGGGACCAACAGGAT 59.649 61.111 0.00 0.00 0.00 3.24
2971 3442 3.948719 GGCACGGGACCAACAGGA 61.949 66.667 0.00 0.00 0.00 3.86
2972 3443 3.567579 ATGGCACGGGACCAACAGG 62.568 63.158 4.92 0.00 41.49 4.00
2973 3444 2.034066 ATGGCACGGGACCAACAG 59.966 61.111 4.92 0.00 41.49 3.16
2974 3445 2.033448 GATGGCACGGGACCAACA 59.967 61.111 4.92 0.00 41.49 3.33
2975 3446 3.124921 CGATGGCACGGGACCAAC 61.125 66.667 4.92 2.00 41.49 3.77
2976 3447 3.599285 GACGATGGCACGGGACCAA 62.599 63.158 4.92 0.00 41.49 3.67
2977 3448 4.077184 GACGATGGCACGGGACCA 62.077 66.667 12.66 3.26 42.61 4.02
2982 3453 2.252127 ATTTTGCGACGATGGCACGG 62.252 55.000 0.00 0.27 40.71 4.94
2983 3454 0.857311 GATTTTGCGACGATGGCACG 60.857 55.000 0.00 7.71 40.71 5.34
2984 3455 0.447801 AGATTTTGCGACGATGGCAC 59.552 50.000 0.00 0.00 40.71 5.01
2985 3456 0.447406 CAGATTTTGCGACGATGGCA 59.553 50.000 0.00 0.00 38.93 4.92
2986 3457 0.863119 GCAGATTTTGCGACGATGGC 60.863 55.000 0.00 0.00 44.09 4.40
2987 3458 3.224955 GCAGATTTTGCGACGATGG 57.775 52.632 0.00 0.00 44.09 3.51
2996 3467 1.243342 TGGCCACGGAGCAGATTTTG 61.243 55.000 0.00 0.00 0.00 2.44
2997 3468 0.539438 TTGGCCACGGAGCAGATTTT 60.539 50.000 3.88 0.00 0.00 1.82
2998 3469 1.074775 TTGGCCACGGAGCAGATTT 59.925 52.632 3.88 0.00 0.00 2.17
2999 3470 1.675641 GTTGGCCACGGAGCAGATT 60.676 57.895 3.88 0.00 0.00 2.40
3000 3471 2.045926 GTTGGCCACGGAGCAGAT 60.046 61.111 3.88 0.00 0.00 2.90
3001 3472 3.113514 TTGTTGGCCACGGAGCAGA 62.114 57.895 3.88 0.00 0.00 4.26
3002 3473 2.594303 TTGTTGGCCACGGAGCAG 60.594 61.111 3.88 0.00 0.00 4.24
3003 3474 2.594303 CTTGTTGGCCACGGAGCA 60.594 61.111 3.88 0.00 0.00 4.26
3004 3475 2.193536 AACTTGTTGGCCACGGAGC 61.194 57.895 3.88 0.00 0.00 4.70
3005 3476 1.654220 CAACTTGTTGGCCACGGAG 59.346 57.895 3.88 5.84 0.00 4.63
3006 3477 1.826054 CCAACTTGTTGGCCACGGA 60.826 57.895 18.05 0.00 35.00 4.69
3007 3478 2.727544 CCAACTTGTTGGCCACGG 59.272 61.111 18.05 0.00 35.00 4.94
3013 3484 1.826054 TGGTCCGCCAACTTGTTGG 60.826 57.895 23.82 23.82 42.83 3.77
3014 3485 3.834726 TGGTCCGCCAACTTGTTG 58.165 55.556 6.52 6.52 42.83 3.33
3026 3497 1.209504 TCACGAATCCAGGAATGGTCC 59.790 52.381 0.00 0.00 45.35 4.46
3027 3498 2.280628 GTCACGAATCCAGGAATGGTC 58.719 52.381 0.00 0.00 0.00 4.02
3028 3499 1.628340 TGTCACGAATCCAGGAATGGT 59.372 47.619 0.00 0.00 0.00 3.55
3029 3500 2.401583 TGTCACGAATCCAGGAATGG 57.598 50.000 0.00 0.00 0.00 3.16
3030 3501 2.874701 GGATGTCACGAATCCAGGAATG 59.125 50.000 0.00 0.00 42.79 2.67
3031 3502 2.483714 CGGATGTCACGAATCCAGGAAT 60.484 50.000 0.00 0.00 43.33 3.01
3032 3503 1.134818 CGGATGTCACGAATCCAGGAA 60.135 52.381 0.00 0.00 43.33 3.36
3033 3504 0.459899 CGGATGTCACGAATCCAGGA 59.540 55.000 0.00 0.00 43.33 3.86
3034 3505 0.175760 ACGGATGTCACGAATCCAGG 59.824 55.000 3.54 0.00 43.33 4.45
3035 3506 2.732366 CTACGGATGTCACGAATCCAG 58.268 52.381 3.54 0.00 43.33 3.86
3036 3507 1.202371 GCTACGGATGTCACGAATCCA 60.202 52.381 3.54 0.00 43.33 3.41
3037 3508 1.488527 GCTACGGATGTCACGAATCC 58.511 55.000 0.00 0.00 40.30 3.01
3038 3509 1.121240 CGCTACGGATGTCACGAATC 58.879 55.000 0.00 0.00 34.93 2.52
3039 3510 0.870307 GCGCTACGGATGTCACGAAT 60.870 55.000 0.00 0.00 34.93 3.34
3040 3511 1.515519 GCGCTACGGATGTCACGAA 60.516 57.895 0.00 0.00 34.93 3.85
3041 3512 1.929806 AAGCGCTACGGATGTCACGA 61.930 55.000 12.05 0.00 34.93 4.35
3042 3513 1.076533 AAAGCGCTACGGATGTCACG 61.077 55.000 12.05 0.00 37.36 4.35
3043 3514 0.370273 CAAAGCGCTACGGATGTCAC 59.630 55.000 12.05 0.00 0.00 3.67
3044 3515 0.739462 CCAAAGCGCTACGGATGTCA 60.739 55.000 12.05 0.00 0.00 3.58
3045 3516 1.429148 CCCAAAGCGCTACGGATGTC 61.429 60.000 23.09 0.00 0.00 3.06
3046 3517 1.449601 CCCAAAGCGCTACGGATGT 60.450 57.895 23.09 0.00 0.00 3.06
3047 3518 2.823829 GCCCAAAGCGCTACGGATG 61.824 63.158 23.09 12.03 0.00 3.51
3048 3519 2.513897 GCCCAAAGCGCTACGGAT 60.514 61.111 23.09 0.00 0.00 4.18
3049 3520 4.770874 GGCCCAAAGCGCTACGGA 62.771 66.667 23.09 0.00 45.17 4.69
3065 3536 4.690719 TGTAACAGTGCGGCCGGG 62.691 66.667 29.38 0.00 0.00 5.73
3066 3537 2.495366 TACTGTAACAGTGCGGCCGG 62.495 60.000 29.38 12.94 45.01 6.13
3067 3538 1.080366 TACTGTAACAGTGCGGCCG 60.080 57.895 24.05 24.05 45.01 6.13
3068 3539 1.017701 GGTACTGTAACAGTGCGGCC 61.018 60.000 0.00 0.00 45.56 6.13
3069 3540 0.037605 AGGTACTGTAACAGTGCGGC 60.038 55.000 5.55 0.00 45.56 6.53
3070 3541 1.731424 CGAGGTACTGTAACAGTGCGG 60.731 57.143 5.55 0.00 45.56 5.69
3071 3542 1.198408 TCGAGGTACTGTAACAGTGCG 59.802 52.381 5.55 3.75 45.56 5.34
3072 3543 2.593257 GTCGAGGTACTGTAACAGTGC 58.407 52.381 5.55 0.00 45.01 4.40
3073 3544 2.818432 AGGTCGAGGTACTGTAACAGTG 59.182 50.000 5.55 0.00 45.01 3.66
3075 3546 3.127203 CAGAGGTCGAGGTACTGTAACAG 59.873 52.174 5.55 0.00 41.55 3.16
3076 3547 3.079578 CAGAGGTCGAGGTACTGTAACA 58.920 50.000 5.55 0.00 41.55 2.41
3077 3548 2.422832 CCAGAGGTCGAGGTACTGTAAC 59.577 54.545 0.00 0.00 41.55 2.50
3078 3549 2.719739 CCAGAGGTCGAGGTACTGTAA 58.280 52.381 0.00 0.00 41.55 2.41
3079 3550 1.681166 GCCAGAGGTCGAGGTACTGTA 60.681 57.143 0.00 0.00 41.55 2.74
3080 3551 0.966370 GCCAGAGGTCGAGGTACTGT 60.966 60.000 0.00 0.00 41.55 3.55
3081 3552 1.810532 GCCAGAGGTCGAGGTACTG 59.189 63.158 0.00 0.00 41.55 2.74
3083 3554 2.799371 CGCCAGAGGTCGAGGTAC 59.201 66.667 0.00 0.00 0.00 3.34
3084 3555 3.138798 GCGCCAGAGGTCGAGGTA 61.139 66.667 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.