Multiple sequence alignment - TraesCS1A01G219700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G219700 chr1A 100.000 4503 0 0 1 4503 388828720 388833222 0.000000e+00 8316.0
1 TraesCS1A01G219700 chr1B 91.147 2372 121 36 565 2884 418800336 418802670 0.000000e+00 3134.0
2 TraesCS1A01G219700 chr1B 92.563 1385 61 16 3146 4503 418803123 418804492 0.000000e+00 1949.0
3 TraesCS1A01G219700 chr1B 86.456 443 53 4 2 440 339914207 339914646 3.150000e-131 479.0
4 TraesCS1A01G219700 chr1B 86.230 443 54 4 2 440 338875247 338874808 1.470000e-129 473.0
5 TraesCS1A01G219700 chr1B 95.455 176 2 1 2938 3113 418802953 418803122 4.440000e-70 276.0
6 TraesCS1A01G219700 chr1D 94.676 1465 30 19 2392 3815 309070416 309071873 0.000000e+00 2230.0
7 TraesCS1A01G219700 chr1D 89.529 955 73 16 478 1412 309068238 309069185 0.000000e+00 1184.0
8 TraesCS1A01G219700 chr1D 94.958 714 35 1 1418 2131 309069224 309069936 0.000000e+00 1118.0
9 TraesCS1A01G219700 chr1D 92.635 706 32 12 3811 4500 309072378 309073079 0.000000e+00 998.0
10 TraesCS1A01G219700 chr7B 87.755 441 51 3 1 440 394564773 394565211 3.110000e-141 512.0
11 TraesCS1A01G219700 chr7B 87.302 441 55 1 1 440 394410841 394411281 1.870000e-138 503.0
12 TraesCS1A01G219700 chr6D 88.140 430 50 1 11 440 303206109 303206537 1.120000e-140 510.0
13 TraesCS1A01G219700 chr7D 90.761 368 32 2 74 441 526182434 526182799 1.460000e-134 490.0
14 TraesCS1A01G219700 chr7D 83.209 268 35 9 4187 4447 461395426 461395690 2.090000e-58 237.0
15 TraesCS1A01G219700 chr5D 86.406 434 55 4 11 441 271458816 271459248 5.270000e-129 472.0
16 TraesCS1A01G219700 chr3B 85.553 443 57 7 1 440 368088399 368088837 1.480000e-124 457.0
17 TraesCS1A01G219700 chr3B 89.583 48 5 0 3943 3990 793364535 793364582 1.350000e-05 62.1
18 TraesCS1A01G219700 chr3D 85.169 445 58 7 1 440 72701882 72701441 2.470000e-122 449.0
19 TraesCS1A01G219700 chr2A 83.525 261 39 3 4196 4455 757962894 757962637 1.620000e-59 241.0
20 TraesCS1A01G219700 chr5A 85.075 201 28 2 4196 4395 11777775 11777974 2.120000e-48 204.0
21 TraesCS1A01G219700 chr5A 75.847 236 42 11 4184 4405 535646448 535646214 6.160000e-19 106.0
22 TraesCS1A01G219700 chr6B 90.909 44 3 1 3264 3306 702377200 702377243 1.750000e-04 58.4
23 TraesCS1A01G219700 chr7A 100.000 30 0 0 3262 3291 42269124 42269095 6.290000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G219700 chr1A 388828720 388833222 4502 False 8316.000000 8316 100.0000 1 4503 1 chr1A.!!$F1 4502
1 TraesCS1A01G219700 chr1B 418800336 418804492 4156 False 1786.333333 3134 93.0550 565 4503 3 chr1B.!!$F2 3938
2 TraesCS1A01G219700 chr1D 309068238 309073079 4841 False 1382.500000 2230 92.9495 478 4500 4 chr1D.!!$F1 4022

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.033504 ACTGAACTGTGGCAGTACCG 59.966 55.0 13.00 0.00 44.62 4.02 F
236 237 0.034756 AACATTTTTGAAGCGGGCCC 59.965 50.0 13.57 13.57 0.00 5.80 F
1001 1014 0.035317 TGCCTCACTCGCAAGTTGAT 59.965 50.0 7.16 0.00 31.71 2.57 F
1476 1527 0.104120 ATGACCGGATTGAATCGCGA 59.896 50.0 13.09 13.09 0.00 5.87 F
1596 1654 0.251634 AGCTTACCCTCTTGCAGCTC 59.748 55.0 0.00 0.00 35.95 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1549 1607 0.035739 GGCTCGGGTTAACTGGACAA 59.964 55.000 5.42 0.00 0.00 3.18 R
1791 1849 2.397549 GTTCAATGTGAGCCTTGTTGC 58.602 47.619 0.00 0.00 0.00 4.17 R
2337 2396 0.529773 TCTCTCTCTCTCGCTCGCTC 60.530 60.000 0.00 0.00 0.00 5.03 R
2819 3096 1.005394 TGGGAAAGAAGACGGCGTC 60.005 57.895 31.33 31.33 0.00 5.19 R
3514 4060 0.178998 AGCTGGATGCATGGATGGAC 60.179 55.000 2.46 0.00 45.94 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.037428 CTACCGCCCTACTACCGC 58.963 66.667 0.00 0.00 0.00 5.68
18 19 1.527844 CTACCGCCCTACTACCGCT 60.528 63.158 0.00 0.00 0.00 5.52
19 20 1.513836 CTACCGCCCTACTACCGCTC 61.514 65.000 0.00 0.00 0.00 5.03
20 21 2.269520 TACCGCCCTACTACCGCTCA 62.270 60.000 0.00 0.00 0.00 4.26
21 22 2.201022 CCGCCCTACTACCGCTCAT 61.201 63.158 0.00 0.00 0.00 2.90
22 23 1.740285 CGCCCTACTACCGCTCATT 59.260 57.895 0.00 0.00 0.00 2.57
23 24 0.104304 CGCCCTACTACCGCTCATTT 59.896 55.000 0.00 0.00 0.00 2.32
24 25 1.338973 CGCCCTACTACCGCTCATTTA 59.661 52.381 0.00 0.00 0.00 1.40
25 26 2.752121 GCCCTACTACCGCTCATTTAC 58.248 52.381 0.00 0.00 0.00 2.01
26 27 2.101917 GCCCTACTACCGCTCATTTACA 59.898 50.000 0.00 0.00 0.00 2.41
27 28 3.431207 GCCCTACTACCGCTCATTTACAA 60.431 47.826 0.00 0.00 0.00 2.41
28 29 4.761975 CCCTACTACCGCTCATTTACAAA 58.238 43.478 0.00 0.00 0.00 2.83
29 30 4.809426 CCCTACTACCGCTCATTTACAAAG 59.191 45.833 0.00 0.00 0.00 2.77
30 31 4.270325 CCTACTACCGCTCATTTACAAAGC 59.730 45.833 0.00 0.00 0.00 3.51
31 32 3.670625 ACTACCGCTCATTTACAAAGCA 58.329 40.909 0.00 0.00 35.76 3.91
32 33 2.989422 ACCGCTCATTTACAAAGCAC 57.011 45.000 0.00 0.00 35.76 4.40
33 34 2.504367 ACCGCTCATTTACAAAGCACT 58.496 42.857 0.00 0.00 35.76 4.40
34 35 3.670625 ACCGCTCATTTACAAAGCACTA 58.329 40.909 0.00 0.00 35.76 2.74
35 36 4.069304 ACCGCTCATTTACAAAGCACTAA 58.931 39.130 0.00 0.00 35.76 2.24
36 37 4.517453 ACCGCTCATTTACAAAGCACTAAA 59.483 37.500 0.00 0.00 35.76 1.85
37 38 5.009210 ACCGCTCATTTACAAAGCACTAAAA 59.991 36.000 0.00 0.00 35.76 1.52
38 39 5.918011 CCGCTCATTTACAAAGCACTAAAAA 59.082 36.000 0.00 0.00 35.76 1.94
39 40 6.586082 CCGCTCATTTACAAAGCACTAAAAAT 59.414 34.615 0.00 0.00 35.76 1.82
40 41 7.753132 CCGCTCATTTACAAAGCACTAAAAATA 59.247 33.333 0.00 0.00 35.76 1.40
41 42 8.788813 CGCTCATTTACAAAGCACTAAAAATAG 58.211 33.333 0.00 0.00 35.76 1.73
42 43 9.076596 GCTCATTTACAAAGCACTAAAAATAGG 57.923 33.333 0.00 0.00 36.06 2.57
44 45 9.906660 TCATTTACAAAGCACTAAAAATAGGTG 57.093 29.630 0.00 0.00 0.00 4.00
45 46 9.139174 CATTTACAAAGCACTAAAAATAGGTGG 57.861 33.333 0.00 0.00 0.00 4.61
46 47 8.466617 TTTACAAAGCACTAAAAATAGGTGGA 57.533 30.769 0.00 0.00 0.00 4.02
47 48 6.969993 ACAAAGCACTAAAAATAGGTGGAA 57.030 33.333 0.00 0.00 0.00 3.53
48 49 6.981722 ACAAAGCACTAAAAATAGGTGGAAG 58.018 36.000 0.00 0.00 0.00 3.46
49 50 6.549736 ACAAAGCACTAAAAATAGGTGGAAGT 59.450 34.615 0.00 0.00 0.00 3.01
50 51 6.575162 AAGCACTAAAAATAGGTGGAAGTG 57.425 37.500 0.00 0.00 36.74 3.16
52 53 5.310720 CACTAAAAATAGGTGGAAGTGCC 57.689 43.478 0.00 0.00 37.10 5.01
53 54 4.764823 CACTAAAAATAGGTGGAAGTGCCA 59.235 41.667 0.00 0.00 46.96 4.92
71 72 3.614399 AGTAGCACTGAACTGTGGC 57.386 52.632 12.26 6.21 38.31 5.01
72 73 0.758734 AGTAGCACTGAACTGTGGCA 59.241 50.000 12.26 0.00 38.31 4.92
73 74 1.151668 GTAGCACTGAACTGTGGCAG 58.848 55.000 12.26 8.78 38.31 4.85
75 76 0.758734 AGCACTGAACTGTGGCAGTA 59.241 50.000 13.90 0.00 44.62 2.74
76 77 0.868406 GCACTGAACTGTGGCAGTAC 59.132 55.000 13.90 7.21 44.62 2.73
77 78 1.512926 CACTGAACTGTGGCAGTACC 58.487 55.000 13.90 0.00 44.62 3.34
78 79 0.033504 ACTGAACTGTGGCAGTACCG 59.966 55.000 13.00 0.00 44.62 4.02
79 80 1.291877 CTGAACTGTGGCAGTACCGC 61.292 60.000 1.97 0.00 44.62 5.68
84 85 2.125512 GTGGCAGTACCGCTGGAG 60.126 66.667 0.25 0.00 46.20 3.86
85 86 4.082523 TGGCAGTACCGCTGGAGC 62.083 66.667 0.25 0.00 45.14 4.70
103 104 4.904466 GGTACTACCGTGGTGCAG 57.096 61.111 0.72 0.00 0.00 4.41
104 105 2.269978 GGTACTACCGTGGTGCAGA 58.730 57.895 0.72 0.00 0.00 4.26
105 106 0.172803 GGTACTACCGTGGTGCAGAG 59.827 60.000 0.72 0.00 0.00 3.35
106 107 0.458025 GTACTACCGTGGTGCAGAGC 60.458 60.000 0.72 0.00 0.00 4.09
107 108 1.929806 TACTACCGTGGTGCAGAGCG 61.930 60.000 0.72 0.00 0.00 5.03
110 111 4.063967 CCGTGGTGCAGAGCGGTA 62.064 66.667 12.84 0.00 39.41 4.02
111 112 2.809601 CGTGGTGCAGAGCGGTAC 60.810 66.667 0.00 0.00 0.00 3.34
112 113 2.657237 GTGGTGCAGAGCGGTACT 59.343 61.111 0.00 0.00 0.00 2.73
113 114 1.446272 GTGGTGCAGAGCGGTACTC 60.446 63.158 0.00 0.00 46.66 2.59
125 126 2.987752 GGTACTCCCGCTTATGTGC 58.012 57.895 0.00 0.00 0.00 4.57
126 127 0.532196 GGTACTCCCGCTTATGTGCC 60.532 60.000 0.00 0.00 0.00 5.01
127 128 0.464452 GTACTCCCGCTTATGTGCCT 59.536 55.000 0.00 0.00 0.00 4.75
128 129 1.134491 GTACTCCCGCTTATGTGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
129 130 1.200519 ACTCCCGCTTATGTGCCTTA 58.799 50.000 0.00 0.00 0.00 2.69
130 131 1.139058 ACTCCCGCTTATGTGCCTTAG 59.861 52.381 0.00 0.00 0.00 2.18
131 132 0.468226 TCCCGCTTATGTGCCTTAGG 59.532 55.000 0.00 0.00 0.00 2.69
132 133 0.468226 CCCGCTTATGTGCCTTAGGA 59.532 55.000 0.69 0.00 0.00 2.94
133 134 1.134220 CCCGCTTATGTGCCTTAGGAA 60.134 52.381 0.69 0.00 0.00 3.36
134 135 2.639065 CCGCTTATGTGCCTTAGGAAA 58.361 47.619 0.69 0.00 0.00 3.13
135 136 3.214328 CCGCTTATGTGCCTTAGGAAAT 58.786 45.455 0.69 0.00 0.00 2.17
136 137 3.251004 CCGCTTATGTGCCTTAGGAAATC 59.749 47.826 0.69 0.00 0.00 2.17
137 138 3.251004 CGCTTATGTGCCTTAGGAAATCC 59.749 47.826 0.69 0.00 0.00 3.01
138 139 3.570125 GCTTATGTGCCTTAGGAAATCCC 59.430 47.826 0.69 0.00 36.42 3.85
139 140 4.792068 CTTATGTGCCTTAGGAAATCCCA 58.208 43.478 0.69 0.00 37.41 4.37
140 141 3.979501 ATGTGCCTTAGGAAATCCCAT 57.020 42.857 0.69 0.00 37.41 4.00
141 142 3.017048 TGTGCCTTAGGAAATCCCATG 57.983 47.619 0.69 0.00 37.41 3.66
142 143 1.683385 GTGCCTTAGGAAATCCCATGC 59.317 52.381 0.69 0.00 37.41 4.06
143 144 1.287442 TGCCTTAGGAAATCCCATGCA 59.713 47.619 0.69 0.00 37.41 3.96
144 145 1.683385 GCCTTAGGAAATCCCATGCAC 59.317 52.381 0.69 0.00 37.41 4.57
145 146 2.949963 GCCTTAGGAAATCCCATGCACA 60.950 50.000 0.69 0.00 37.41 4.57
146 147 3.364549 CCTTAGGAAATCCCATGCACAA 58.635 45.455 0.00 0.00 37.41 3.33
147 148 3.382546 CCTTAGGAAATCCCATGCACAAG 59.617 47.826 0.00 0.00 37.41 3.16
148 149 1.856629 AGGAAATCCCATGCACAAGG 58.143 50.000 0.00 0.00 37.41 3.61
149 150 1.358787 AGGAAATCCCATGCACAAGGA 59.641 47.619 3.82 3.82 37.41 3.36
150 151 2.178580 GGAAATCCCATGCACAAGGAA 58.821 47.619 5.37 0.00 32.26 3.36
151 152 2.167075 GGAAATCCCATGCACAAGGAAG 59.833 50.000 5.37 0.00 32.26 3.46
152 153 1.856629 AATCCCATGCACAAGGAAGG 58.143 50.000 5.37 0.00 32.26 3.46
153 154 1.002069 ATCCCATGCACAAGGAAGGA 58.998 50.000 5.37 0.00 32.26 3.36
154 155 0.038166 TCCCATGCACAAGGAAGGAC 59.962 55.000 3.37 0.00 0.00 3.85
155 156 0.251297 CCCATGCACAAGGAAGGACA 60.251 55.000 3.37 0.00 0.00 4.02
156 157 1.619654 CCATGCACAAGGAAGGACAA 58.380 50.000 0.00 0.00 0.00 3.18
157 158 1.542915 CCATGCACAAGGAAGGACAAG 59.457 52.381 0.00 0.00 0.00 3.16
158 159 1.068055 CATGCACAAGGAAGGACAAGC 60.068 52.381 0.00 0.00 0.00 4.01
159 160 0.183492 TGCACAAGGAAGGACAAGCT 59.817 50.000 0.00 0.00 0.00 3.74
160 161 0.877743 GCACAAGGAAGGACAAGCTC 59.122 55.000 0.00 0.00 0.00 4.09
161 162 1.528129 CACAAGGAAGGACAAGCTCC 58.472 55.000 0.00 0.00 39.81 4.70
162 163 1.140312 ACAAGGAAGGACAAGCTCCA 58.860 50.000 0.00 0.00 42.46 3.86
163 164 1.707427 ACAAGGAAGGACAAGCTCCAT 59.293 47.619 0.00 0.00 42.46 3.41
164 165 2.108952 ACAAGGAAGGACAAGCTCCATT 59.891 45.455 0.00 0.00 42.46 3.16
165 166 2.490903 CAAGGAAGGACAAGCTCCATTG 59.509 50.000 0.00 0.00 42.46 2.82
166 167 0.813821 GGAAGGACAAGCTCCATTGC 59.186 55.000 0.00 0.00 42.46 3.56
167 168 0.813821 GAAGGACAAGCTCCATTGCC 59.186 55.000 0.00 0.00 42.46 4.52
168 169 0.962356 AAGGACAAGCTCCATTGCCG 60.962 55.000 0.00 0.00 42.46 5.69
169 170 2.409870 GGACAAGCTCCATTGCCGG 61.410 63.158 0.00 0.00 39.21 6.13
170 171 2.361610 ACAAGCTCCATTGCCGGG 60.362 61.111 2.18 0.00 33.28 5.73
171 172 2.045045 CAAGCTCCATTGCCGGGA 60.045 61.111 2.18 0.00 0.00 5.14
172 173 1.678635 CAAGCTCCATTGCCGGGAA 60.679 57.895 12.06 12.06 33.11 3.97
173 174 1.379044 AAGCTCCATTGCCGGGAAG 60.379 57.895 15.53 6.37 33.11 3.46
174 175 1.852157 AAGCTCCATTGCCGGGAAGA 61.852 55.000 15.53 5.99 33.11 2.87
175 176 1.378514 GCTCCATTGCCGGGAAGAA 60.379 57.895 15.53 0.75 33.11 2.52
176 177 0.965363 GCTCCATTGCCGGGAAGAAA 60.965 55.000 15.53 0.37 33.11 2.52
177 178 1.544724 CTCCATTGCCGGGAAGAAAA 58.455 50.000 15.53 0.00 33.11 2.29
178 179 1.474077 CTCCATTGCCGGGAAGAAAAG 59.526 52.381 15.53 5.22 33.11 2.27
179 180 1.074727 TCCATTGCCGGGAAGAAAAGA 59.925 47.619 15.53 3.27 0.00 2.52
180 181 1.474077 CCATTGCCGGGAAGAAAAGAG 59.526 52.381 15.53 0.00 0.00 2.85
181 182 1.474077 CATTGCCGGGAAGAAAAGAGG 59.526 52.381 15.53 0.00 0.00 3.69
182 183 0.251165 TTGCCGGGAAGAAAAGAGGG 60.251 55.000 3.37 0.00 0.00 4.30
183 184 1.379146 GCCGGGAAGAAAAGAGGGT 59.621 57.895 2.18 0.00 0.00 4.34
184 185 0.616891 GCCGGGAAGAAAAGAGGGTA 59.383 55.000 2.18 0.00 0.00 3.69
185 186 1.678123 GCCGGGAAGAAAAGAGGGTAC 60.678 57.143 2.18 0.00 0.00 3.34
186 187 1.626825 CCGGGAAGAAAAGAGGGTACA 59.373 52.381 0.00 0.00 0.00 2.90
187 188 2.039348 CCGGGAAGAAAAGAGGGTACAA 59.961 50.000 0.00 0.00 0.00 2.41
188 189 3.497227 CCGGGAAGAAAAGAGGGTACAAA 60.497 47.826 0.00 0.00 0.00 2.83
189 190 4.139038 CGGGAAGAAAAGAGGGTACAAAA 58.861 43.478 0.00 0.00 0.00 2.44
190 191 4.581409 CGGGAAGAAAAGAGGGTACAAAAA 59.419 41.667 0.00 0.00 0.00 1.94
191 192 5.278315 CGGGAAGAAAAGAGGGTACAAAAAG 60.278 44.000 0.00 0.00 0.00 2.27
192 193 5.831525 GGGAAGAAAAGAGGGTACAAAAAGA 59.168 40.000 0.00 0.00 0.00 2.52
193 194 6.238953 GGGAAGAAAAGAGGGTACAAAAAGAC 60.239 42.308 0.00 0.00 0.00 3.01
194 195 6.546403 GGAAGAAAAGAGGGTACAAAAAGACT 59.454 38.462 0.00 0.00 0.00 3.24
195 196 6.944234 AGAAAAGAGGGTACAAAAAGACTG 57.056 37.500 0.00 0.00 0.00 3.51
196 197 6.424032 AGAAAAGAGGGTACAAAAAGACTGT 58.576 36.000 0.00 0.00 0.00 3.55
197 198 6.318900 AGAAAAGAGGGTACAAAAAGACTGTG 59.681 38.462 0.00 0.00 0.00 3.66
198 199 4.772886 AGAGGGTACAAAAAGACTGTGT 57.227 40.909 0.00 0.00 0.00 3.72
199 200 5.881923 AGAGGGTACAAAAAGACTGTGTA 57.118 39.130 0.00 0.00 0.00 2.90
200 201 6.435292 AGAGGGTACAAAAAGACTGTGTAT 57.565 37.500 0.00 0.00 30.87 2.29
201 202 6.231211 AGAGGGTACAAAAAGACTGTGTATG 58.769 40.000 0.00 0.00 30.87 2.39
202 203 5.937111 AGGGTACAAAAAGACTGTGTATGT 58.063 37.500 0.00 0.00 30.87 2.29
203 204 5.763204 AGGGTACAAAAAGACTGTGTATGTG 59.237 40.000 0.00 0.00 30.87 3.21
204 205 5.529800 GGGTACAAAAAGACTGTGTATGTGT 59.470 40.000 0.00 0.00 30.87 3.72
205 206 6.038936 GGGTACAAAAAGACTGTGTATGTGTT 59.961 38.462 0.00 0.00 30.87 3.32
206 207 6.910433 GGTACAAAAAGACTGTGTATGTGTTG 59.090 38.462 0.00 0.00 30.87 3.33
207 208 6.751514 ACAAAAAGACTGTGTATGTGTTGA 57.248 33.333 0.00 0.00 0.00 3.18
208 209 7.333528 ACAAAAAGACTGTGTATGTGTTGAT 57.666 32.000 0.00 0.00 0.00 2.57
209 210 7.771183 ACAAAAAGACTGTGTATGTGTTGATT 58.229 30.769 0.00 0.00 0.00 2.57
210 211 7.915397 ACAAAAAGACTGTGTATGTGTTGATTC 59.085 33.333 0.00 0.00 0.00 2.52
211 212 6.560253 AAAGACTGTGTATGTGTTGATTCC 57.440 37.500 0.00 0.00 0.00 3.01
212 213 5.227569 AGACTGTGTATGTGTTGATTCCA 57.772 39.130 0.00 0.00 0.00 3.53
213 214 4.997395 AGACTGTGTATGTGTTGATTCCAC 59.003 41.667 0.00 0.00 0.00 4.02
214 215 4.072131 ACTGTGTATGTGTTGATTCCACC 58.928 43.478 0.00 0.00 31.71 4.61
215 216 3.417101 TGTGTATGTGTTGATTCCACCC 58.583 45.455 0.00 0.00 31.71 4.61
216 217 3.181439 TGTGTATGTGTTGATTCCACCCA 60.181 43.478 0.00 0.00 31.71 4.51
217 218 3.823873 GTGTATGTGTTGATTCCACCCAA 59.176 43.478 0.00 0.00 31.71 4.12
218 219 4.279671 GTGTATGTGTTGATTCCACCCAAA 59.720 41.667 0.00 0.00 31.71 3.28
219 220 4.279671 TGTATGTGTTGATTCCACCCAAAC 59.720 41.667 0.00 0.00 31.71 2.93
220 221 2.739943 TGTGTTGATTCCACCCAAACA 58.260 42.857 0.00 0.00 31.71 2.83
221 222 3.303938 TGTGTTGATTCCACCCAAACAT 58.696 40.909 0.00 0.00 31.71 2.71
222 223 3.708631 TGTGTTGATTCCACCCAAACATT 59.291 39.130 0.00 0.00 31.71 2.71
223 224 4.163078 TGTGTTGATTCCACCCAAACATTT 59.837 37.500 0.00 0.00 31.71 2.32
224 225 5.122519 GTGTTGATTCCACCCAAACATTTT 58.877 37.500 0.00 0.00 0.00 1.82
225 226 5.588246 GTGTTGATTCCACCCAAACATTTTT 59.412 36.000 0.00 0.00 0.00 1.94
226 227 5.587844 TGTTGATTCCACCCAAACATTTTTG 59.412 36.000 0.00 0.00 41.71 2.44
227 228 5.620738 TGATTCCACCCAAACATTTTTGA 57.379 34.783 5.90 0.00 44.38 2.69
228 229 5.994250 TGATTCCACCCAAACATTTTTGAA 58.006 33.333 5.90 0.00 44.38 2.69
229 230 6.054295 TGATTCCACCCAAACATTTTTGAAG 58.946 36.000 5.90 0.16 44.38 3.02
230 231 3.802866 TCCACCCAAACATTTTTGAAGC 58.197 40.909 5.90 0.00 44.38 3.86
231 232 2.543430 CCACCCAAACATTTTTGAAGCG 59.457 45.455 5.90 0.00 44.38 4.68
232 233 2.543430 CACCCAAACATTTTTGAAGCGG 59.457 45.455 5.90 1.50 44.38 5.52
233 234 2.142319 CCCAAACATTTTTGAAGCGGG 58.858 47.619 5.90 0.00 44.38 6.13
234 235 1.530720 CCAAACATTTTTGAAGCGGGC 59.469 47.619 5.90 0.00 44.38 6.13
235 236 1.530720 CAAACATTTTTGAAGCGGGCC 59.469 47.619 0.00 0.00 44.38 5.80
236 237 0.034756 AACATTTTTGAAGCGGGCCC 59.965 50.000 13.57 13.57 0.00 5.80
237 238 1.079197 CATTTTTGAAGCGGGCCCC 60.079 57.895 18.66 9.47 0.00 5.80
238 239 2.290287 ATTTTTGAAGCGGGCCCCC 61.290 57.895 18.66 7.48 0.00 5.40
239 240 2.746947 ATTTTTGAAGCGGGCCCCCT 62.747 55.000 18.66 10.57 0.00 4.79
240 241 3.879180 TTTTGAAGCGGGCCCCCTC 62.879 63.158 18.66 10.97 0.00 4.30
243 244 3.087906 GAAGCGGGCCCCCTCTTA 61.088 66.667 18.66 0.00 40.77 2.10
244 245 2.612746 AAGCGGGCCCCCTCTTAA 60.613 61.111 18.66 0.00 39.13 1.85
245 246 1.996070 GAAGCGGGCCCCCTCTTAAT 61.996 60.000 18.66 0.00 40.77 1.40
246 247 0.696485 AAGCGGGCCCCCTCTTAATA 60.696 55.000 18.66 0.00 39.13 0.98
247 248 1.128188 AGCGGGCCCCCTCTTAATAG 61.128 60.000 18.66 0.00 0.00 1.73
248 249 1.416480 GCGGGCCCCCTCTTAATAGT 61.416 60.000 18.66 0.00 0.00 2.12
249 250 2.019807 CGGGCCCCCTCTTAATAGTA 57.980 55.000 18.66 0.00 0.00 1.82
250 251 1.622312 CGGGCCCCCTCTTAATAGTAC 59.378 57.143 18.66 0.00 0.00 2.73
251 252 1.622312 GGGCCCCCTCTTAATAGTACG 59.378 57.143 12.23 0.00 0.00 3.67
252 253 1.622312 GGCCCCCTCTTAATAGTACGG 59.378 57.143 0.00 0.00 0.00 4.02
253 254 2.323599 GCCCCCTCTTAATAGTACGGT 58.676 52.381 0.00 0.00 0.00 4.83
254 255 2.036862 GCCCCCTCTTAATAGTACGGTG 59.963 54.545 0.00 0.00 0.00 4.94
255 256 3.569491 CCCCCTCTTAATAGTACGGTGA 58.431 50.000 0.00 0.00 0.00 4.02
256 257 4.158015 CCCCCTCTTAATAGTACGGTGAT 58.842 47.826 0.00 0.00 0.00 3.06
257 258 4.220163 CCCCCTCTTAATAGTACGGTGATC 59.780 50.000 0.00 0.00 0.00 2.92
258 259 4.220163 CCCCTCTTAATAGTACGGTGATCC 59.780 50.000 0.00 0.00 0.00 3.36
259 260 5.078256 CCCTCTTAATAGTACGGTGATCCT 58.922 45.833 0.00 0.00 0.00 3.24
260 261 6.243900 CCCTCTTAATAGTACGGTGATCCTA 58.756 44.000 0.00 0.00 0.00 2.94
261 262 6.150809 CCCTCTTAATAGTACGGTGATCCTAC 59.849 46.154 0.00 0.00 0.00 3.18
262 263 6.128336 CCTCTTAATAGTACGGTGATCCTACG 60.128 46.154 0.00 0.00 0.00 3.51
263 264 6.524734 TCTTAATAGTACGGTGATCCTACGA 58.475 40.000 7.63 0.00 0.00 3.43
264 265 6.425114 TCTTAATAGTACGGTGATCCTACGAC 59.575 42.308 7.63 2.89 0.00 4.34
265 266 2.706339 AGTACGGTGATCCTACGACT 57.294 50.000 7.63 4.68 0.00 4.18
266 267 2.559440 AGTACGGTGATCCTACGACTC 58.441 52.381 7.63 0.00 0.00 3.36
267 268 2.093288 AGTACGGTGATCCTACGACTCA 60.093 50.000 7.63 0.00 0.00 3.41
268 269 1.830279 ACGGTGATCCTACGACTCAA 58.170 50.000 7.63 0.00 0.00 3.02
269 270 2.165167 ACGGTGATCCTACGACTCAAA 58.835 47.619 7.63 0.00 0.00 2.69
270 271 2.758979 ACGGTGATCCTACGACTCAAAT 59.241 45.455 7.63 0.00 0.00 2.32
271 272 3.181489 ACGGTGATCCTACGACTCAAATC 60.181 47.826 7.63 0.00 0.00 2.17
272 273 3.718815 GGTGATCCTACGACTCAAATCC 58.281 50.000 0.00 0.00 0.00 3.01
273 274 3.132289 GGTGATCCTACGACTCAAATCCA 59.868 47.826 0.00 0.00 0.00 3.41
274 275 4.113354 GTGATCCTACGACTCAAATCCAC 58.887 47.826 0.00 0.00 0.00 4.02
275 276 3.132289 TGATCCTACGACTCAAATCCACC 59.868 47.826 0.00 0.00 0.00 4.61
276 277 2.531771 TCCTACGACTCAAATCCACCA 58.468 47.619 0.00 0.00 0.00 4.17
277 278 2.901192 TCCTACGACTCAAATCCACCAA 59.099 45.455 0.00 0.00 0.00 3.67
278 279 3.325425 TCCTACGACTCAAATCCACCAAA 59.675 43.478 0.00 0.00 0.00 3.28
279 280 4.069304 CCTACGACTCAAATCCACCAAAA 58.931 43.478 0.00 0.00 0.00 2.44
280 281 4.517453 CCTACGACTCAAATCCACCAAAAA 59.483 41.667 0.00 0.00 0.00 1.94
281 282 5.183140 CCTACGACTCAAATCCACCAAAAAT 59.817 40.000 0.00 0.00 0.00 1.82
282 283 4.870363 ACGACTCAAATCCACCAAAAATG 58.130 39.130 0.00 0.00 0.00 2.32
283 284 4.582656 ACGACTCAAATCCACCAAAAATGA 59.417 37.500 0.00 0.00 0.00 2.57
284 285 5.068460 ACGACTCAAATCCACCAAAAATGAA 59.932 36.000 0.00 0.00 0.00 2.57
285 286 5.982516 CGACTCAAATCCACCAAAAATGAAA 59.017 36.000 0.00 0.00 0.00 2.69
286 287 6.646240 CGACTCAAATCCACCAAAAATGAAAT 59.354 34.615 0.00 0.00 0.00 2.17
287 288 7.359431 CGACTCAAATCCACCAAAAATGAAATG 60.359 37.037 0.00 0.00 0.00 2.32
288 289 7.281841 ACTCAAATCCACCAAAAATGAAATGT 58.718 30.769 0.00 0.00 0.00 2.71
289 290 8.428063 ACTCAAATCCACCAAAAATGAAATGTA 58.572 29.630 0.00 0.00 0.00 2.29
290 291 9.270640 CTCAAATCCACCAAAAATGAAATGTAA 57.729 29.630 0.00 0.00 0.00 2.41
291 292 9.270640 TCAAATCCACCAAAAATGAAATGTAAG 57.729 29.630 0.00 0.00 0.00 2.34
292 293 9.270640 CAAATCCACCAAAAATGAAATGTAAGA 57.729 29.630 0.00 0.00 0.00 2.10
293 294 9.844257 AAATCCACCAAAAATGAAATGTAAGAA 57.156 25.926 0.00 0.00 0.00 2.52
294 295 9.844257 AATCCACCAAAAATGAAATGTAAGAAA 57.156 25.926 0.00 0.00 0.00 2.52
295 296 9.844257 ATCCACCAAAAATGAAATGTAAGAAAA 57.156 25.926 0.00 0.00 0.00 2.29
296 297 9.103861 TCCACCAAAAATGAAATGTAAGAAAAC 57.896 29.630 0.00 0.00 0.00 2.43
297 298 8.887717 CCACCAAAAATGAAATGTAAGAAAACA 58.112 29.630 0.00 0.00 0.00 2.83
300 301 9.715123 CCAAAAATGAAATGTAAGAAAACAACC 57.285 29.630 0.00 0.00 32.02 3.77
301 302 9.419737 CAAAAATGAAATGTAAGAAAACAACCG 57.580 29.630 0.00 0.00 32.02 4.44
302 303 8.710835 AAAATGAAATGTAAGAAAACAACCGT 57.289 26.923 0.00 0.00 32.02 4.83
303 304 7.924103 AATGAAATGTAAGAAAACAACCGTC 57.076 32.000 0.00 0.00 32.02 4.79
304 305 6.687081 TGAAATGTAAGAAAACAACCGTCT 57.313 33.333 0.00 0.00 32.02 4.18
305 306 7.090953 TGAAATGTAAGAAAACAACCGTCTT 57.909 32.000 0.00 0.00 35.77 3.01
306 307 7.190871 TGAAATGTAAGAAAACAACCGTCTTC 58.809 34.615 0.00 0.00 33.70 2.87
307 308 4.782252 TGTAAGAAAACAACCGTCTTCG 57.218 40.909 0.00 0.00 33.70 3.79
308 309 2.750301 AAGAAAACAACCGTCTTCGC 57.250 45.000 0.00 0.00 35.54 4.70
309 310 1.658994 AGAAAACAACCGTCTTCGCA 58.341 45.000 0.00 0.00 35.54 5.10
310 311 2.011222 AGAAAACAACCGTCTTCGCAA 58.989 42.857 0.00 0.00 35.54 4.85
311 312 2.616842 AGAAAACAACCGTCTTCGCAAT 59.383 40.909 0.00 0.00 35.54 3.56
312 313 3.810941 AGAAAACAACCGTCTTCGCAATA 59.189 39.130 0.00 0.00 35.54 1.90
313 314 4.454504 AGAAAACAACCGTCTTCGCAATAT 59.545 37.500 0.00 0.00 35.54 1.28
314 315 4.336532 AAACAACCGTCTTCGCAATATC 57.663 40.909 0.00 0.00 35.54 1.63
315 316 3.247006 ACAACCGTCTTCGCAATATCT 57.753 42.857 0.00 0.00 35.54 1.98
316 317 3.187700 ACAACCGTCTTCGCAATATCTC 58.812 45.455 0.00 0.00 35.54 2.75
317 318 2.510768 ACCGTCTTCGCAATATCTCC 57.489 50.000 0.00 0.00 35.54 3.71
318 319 1.269102 ACCGTCTTCGCAATATCTCCG 60.269 52.381 0.00 0.00 35.54 4.63
319 320 1.001706 CCGTCTTCGCAATATCTCCGA 60.002 52.381 0.00 0.00 35.54 4.55
320 321 2.311462 CGTCTTCGCAATATCTCCGAG 58.689 52.381 0.00 0.00 32.14 4.63
321 322 2.667137 GTCTTCGCAATATCTCCGAGG 58.333 52.381 0.00 0.00 32.14 4.63
322 323 1.613925 TCTTCGCAATATCTCCGAGGG 59.386 52.381 0.00 0.00 32.14 4.30
323 324 0.679505 TTCGCAATATCTCCGAGGGG 59.320 55.000 0.00 0.00 32.14 4.79
324 325 0.469331 TCGCAATATCTCCGAGGGGT 60.469 55.000 0.00 0.00 33.83 4.95
325 326 1.202964 TCGCAATATCTCCGAGGGGTA 60.203 52.381 0.00 0.00 33.83 3.69
326 327 1.067776 CGCAATATCTCCGAGGGGTAC 60.068 57.143 0.00 0.00 33.83 3.34
327 328 1.067776 GCAATATCTCCGAGGGGTACG 60.068 57.143 0.00 0.00 33.83 3.67
328 329 2.511659 CAATATCTCCGAGGGGTACGA 58.488 52.381 0.00 0.00 33.83 3.43
329 330 2.889045 CAATATCTCCGAGGGGTACGAA 59.111 50.000 0.00 0.00 33.83 3.85
330 331 2.965671 TATCTCCGAGGGGTACGAAT 57.034 50.000 0.00 0.00 33.83 3.34
331 332 1.618487 ATCTCCGAGGGGTACGAATC 58.382 55.000 0.00 0.00 33.83 2.52
332 333 0.816825 TCTCCGAGGGGTACGAATCG 60.817 60.000 0.00 0.00 35.02 3.34
333 334 1.077501 TCCGAGGGGTACGAATCGT 60.078 57.895 14.28 14.28 44.35 3.73
334 335 0.180171 TCCGAGGGGTACGAATCGTA 59.820 55.000 11.84 11.84 41.54 3.43
335 336 1.202806 TCCGAGGGGTACGAATCGTAT 60.203 52.381 18.80 2.37 44.12 3.06
336 337 1.610522 CCGAGGGGTACGAATCGTATT 59.389 52.381 18.80 5.42 44.12 1.89
337 338 2.606308 CCGAGGGGTACGAATCGTATTG 60.606 54.545 18.80 6.60 44.12 1.90
338 339 2.033801 CGAGGGGTACGAATCGTATTGT 59.966 50.000 18.80 4.39 44.12 2.71
339 340 3.378339 GAGGGGTACGAATCGTATTGTG 58.622 50.000 18.80 0.00 44.12 3.33
340 341 1.862827 GGGGTACGAATCGTATTGTGC 59.137 52.381 18.80 5.37 44.12 4.57
341 342 1.862827 GGGTACGAATCGTATTGTGCC 59.137 52.381 18.80 13.81 44.12 5.01
342 343 2.542597 GGTACGAATCGTATTGTGCCA 58.457 47.619 18.80 0.00 44.12 4.92
343 344 3.128349 GGTACGAATCGTATTGTGCCAT 58.872 45.455 18.80 0.00 44.12 4.40
344 345 4.300803 GGTACGAATCGTATTGTGCCATA 58.699 43.478 18.80 0.00 44.12 2.74
345 346 4.927425 GGTACGAATCGTATTGTGCCATAT 59.073 41.667 18.80 0.00 44.12 1.78
346 347 4.990543 ACGAATCGTATTGTGCCATATG 57.009 40.909 6.47 0.00 38.73 1.78
347 348 4.627058 ACGAATCGTATTGTGCCATATGA 58.373 39.130 6.47 0.00 38.73 2.15
348 349 5.237815 ACGAATCGTATTGTGCCATATGAT 58.762 37.500 6.47 0.00 38.73 2.45
349 350 6.394809 ACGAATCGTATTGTGCCATATGATA 58.605 36.000 6.47 0.00 38.73 2.15
350 351 6.531594 ACGAATCGTATTGTGCCATATGATAG 59.468 38.462 6.47 0.00 38.73 2.08
351 352 6.751888 CGAATCGTATTGTGCCATATGATAGA 59.248 38.462 3.65 0.00 31.02 1.98
352 353 7.436376 CGAATCGTATTGTGCCATATGATAGAT 59.564 37.037 3.65 0.00 31.02 1.98
353 354 9.102757 GAATCGTATTGTGCCATATGATAGATT 57.897 33.333 3.65 5.41 31.02 2.40
354 355 8.654230 ATCGTATTGTGCCATATGATAGATTC 57.346 34.615 3.65 0.00 29.84 2.52
355 356 7.840931 TCGTATTGTGCCATATGATAGATTCT 58.159 34.615 3.65 0.00 0.00 2.40
356 357 7.976175 TCGTATTGTGCCATATGATAGATTCTC 59.024 37.037 3.65 0.00 0.00 2.87
357 358 7.978414 CGTATTGTGCCATATGATAGATTCTCT 59.022 37.037 3.65 0.00 0.00 3.10
358 359 9.096160 GTATTGTGCCATATGATAGATTCTCTG 57.904 37.037 3.65 0.00 0.00 3.35
359 360 6.923199 TGTGCCATATGATAGATTCTCTGA 57.077 37.500 3.65 0.00 0.00 3.27
360 361 7.307131 TGTGCCATATGATAGATTCTCTGAA 57.693 36.000 3.65 0.00 0.00 3.02
361 362 7.738847 TGTGCCATATGATAGATTCTCTGAAA 58.261 34.615 3.65 0.00 0.00 2.69
362 363 8.380867 TGTGCCATATGATAGATTCTCTGAAAT 58.619 33.333 3.65 0.00 0.00 2.17
363 364 8.666573 GTGCCATATGATAGATTCTCTGAAATG 58.333 37.037 3.65 0.00 0.00 2.32
364 365 7.336176 TGCCATATGATAGATTCTCTGAAATGC 59.664 37.037 3.65 0.00 0.00 3.56
365 366 7.553402 GCCATATGATAGATTCTCTGAAATGCT 59.447 37.037 3.65 0.00 0.00 3.79
366 367 9.100554 CCATATGATAGATTCTCTGAAATGCTC 57.899 37.037 3.65 0.00 0.00 4.26
367 368 9.654663 CATATGATAGATTCTCTGAAATGCTCA 57.345 33.333 0.00 0.00 0.00 4.26
370 371 8.379457 TGATAGATTCTCTGAAATGCTCAATG 57.621 34.615 0.00 0.00 32.17 2.82
371 372 5.502153 AGATTCTCTGAAATGCTCAATGC 57.498 39.130 0.00 0.00 43.25 3.56
384 385 4.220533 GCTCAATGCACATGATTAGTCC 57.779 45.455 0.00 0.00 42.31 3.85
385 386 3.628942 GCTCAATGCACATGATTAGTCCA 59.371 43.478 0.00 0.00 42.31 4.02
386 387 4.497006 GCTCAATGCACATGATTAGTCCAC 60.497 45.833 0.00 0.00 42.31 4.02
387 388 4.587891 TCAATGCACATGATTAGTCCACA 58.412 39.130 0.00 0.00 0.00 4.17
388 389 5.008980 TCAATGCACATGATTAGTCCACAA 58.991 37.500 0.00 0.00 0.00 3.33
389 390 5.476254 TCAATGCACATGATTAGTCCACAAA 59.524 36.000 0.00 0.00 0.00 2.83
390 391 5.981088 ATGCACATGATTAGTCCACAAAA 57.019 34.783 0.00 0.00 0.00 2.44
391 392 5.375417 TGCACATGATTAGTCCACAAAAG 57.625 39.130 0.00 0.00 0.00 2.27
392 393 4.826733 TGCACATGATTAGTCCACAAAAGT 59.173 37.500 0.00 0.00 0.00 2.66
393 394 6.000840 TGCACATGATTAGTCCACAAAAGTA 58.999 36.000 0.00 0.00 0.00 2.24
394 395 6.658816 TGCACATGATTAGTCCACAAAAGTAT 59.341 34.615 0.00 0.00 0.00 2.12
395 396 7.176515 TGCACATGATTAGTCCACAAAAGTATT 59.823 33.333 0.00 0.00 0.00 1.89
396 397 7.485913 GCACATGATTAGTCCACAAAAGTATTG 59.514 37.037 0.00 0.00 0.00 1.90
397 398 8.514594 CACATGATTAGTCCACAAAAGTATTGT 58.485 33.333 0.00 0.00 0.00 2.71
398 399 8.730680 ACATGATTAGTCCACAAAAGTATTGTC 58.269 33.333 0.00 0.00 0.00 3.18
399 400 8.729756 CATGATTAGTCCACAAAAGTATTGTCA 58.270 33.333 0.00 0.00 0.00 3.58
400 401 8.862325 TGATTAGTCCACAAAAGTATTGTCAT 57.138 30.769 0.00 0.00 0.00 3.06
401 402 8.946085 TGATTAGTCCACAAAAGTATTGTCATC 58.054 33.333 0.00 0.00 0.00 2.92
402 403 8.862325 ATTAGTCCACAAAAGTATTGTCATCA 57.138 30.769 0.00 0.00 0.00 3.07
403 404 8.684386 TTAGTCCACAAAAGTATTGTCATCAA 57.316 30.769 0.00 0.00 37.98 2.57
404 405 7.765695 AGTCCACAAAAGTATTGTCATCAAT 57.234 32.000 0.00 0.00 45.00 2.57
405 406 7.820648 AGTCCACAAAAGTATTGTCATCAATC 58.179 34.615 0.00 0.00 42.45 2.67
406 407 7.448161 AGTCCACAAAAGTATTGTCATCAATCA 59.552 33.333 0.00 0.00 42.45 2.57
407 408 7.538678 GTCCACAAAAGTATTGTCATCAATCAC 59.461 37.037 0.00 0.00 42.45 3.06
408 409 6.808212 CCACAAAAGTATTGTCATCAATCACC 59.192 38.462 0.00 0.00 42.45 4.02
409 410 7.369607 CACAAAAGTATTGTCATCAATCACCA 58.630 34.615 0.00 0.00 42.45 4.17
410 411 7.866898 CACAAAAGTATTGTCATCAATCACCAA 59.133 33.333 0.00 0.00 42.45 3.67
411 412 8.420222 ACAAAAGTATTGTCATCAATCACCAAA 58.580 29.630 0.00 0.00 42.45 3.28
412 413 9.258826 CAAAAGTATTGTCATCAATCACCAAAA 57.741 29.630 0.00 0.00 42.45 2.44
413 414 8.816640 AAAGTATTGTCATCAATCACCAAAAC 57.183 30.769 0.00 0.00 42.45 2.43
414 415 6.924111 AGTATTGTCATCAATCACCAAAACC 58.076 36.000 0.00 0.00 42.45 3.27
415 416 5.804944 ATTGTCATCAATCACCAAAACCA 57.195 34.783 0.00 0.00 39.76 3.67
416 417 4.582701 TGTCATCAATCACCAAAACCAC 57.417 40.909 0.00 0.00 0.00 4.16
417 418 4.214310 TGTCATCAATCACCAAAACCACT 58.786 39.130 0.00 0.00 0.00 4.00
418 419 5.380900 TGTCATCAATCACCAAAACCACTA 58.619 37.500 0.00 0.00 0.00 2.74
419 420 6.009589 TGTCATCAATCACCAAAACCACTAT 58.990 36.000 0.00 0.00 0.00 2.12
420 421 6.072008 TGTCATCAATCACCAAAACCACTATG 60.072 38.462 0.00 0.00 0.00 2.23
421 422 5.418524 TCATCAATCACCAAAACCACTATGG 59.581 40.000 0.00 0.00 45.02 2.74
422 423 4.085733 TCAATCACCAAAACCACTATGGG 58.914 43.478 0.00 0.00 43.37 4.00
423 424 4.085733 CAATCACCAAAACCACTATGGGA 58.914 43.478 0.00 0.00 43.37 4.37
424 425 3.433306 TCACCAAAACCACTATGGGAG 57.567 47.619 0.00 0.00 43.37 4.30
425 426 2.983192 TCACCAAAACCACTATGGGAGA 59.017 45.455 0.00 0.00 43.37 3.71
426 427 3.396276 TCACCAAAACCACTATGGGAGAA 59.604 43.478 0.00 0.00 43.37 2.87
427 428 4.141135 TCACCAAAACCACTATGGGAGAAA 60.141 41.667 0.00 0.00 43.37 2.52
428 429 4.772100 CACCAAAACCACTATGGGAGAAAT 59.228 41.667 0.00 0.00 43.37 2.17
429 430 5.949354 CACCAAAACCACTATGGGAGAAATA 59.051 40.000 0.00 0.00 43.37 1.40
430 431 6.607198 CACCAAAACCACTATGGGAGAAATAT 59.393 38.462 0.00 0.00 43.37 1.28
431 432 6.607198 ACCAAAACCACTATGGGAGAAATATG 59.393 38.462 0.00 0.00 43.37 1.78
432 433 6.461509 CCAAAACCACTATGGGAGAAATATGC 60.462 42.308 0.00 0.00 43.37 3.14
433 434 4.373156 ACCACTATGGGAGAAATATGCC 57.627 45.455 0.00 0.00 43.37 4.40
434 435 3.074538 ACCACTATGGGAGAAATATGCCC 59.925 47.826 0.00 0.00 43.37 5.36
435 436 3.331889 CCACTATGGGAGAAATATGCCCT 59.668 47.826 0.00 0.00 42.52 5.19
436 437 4.536090 CCACTATGGGAGAAATATGCCCTA 59.464 45.833 0.00 0.00 42.52 3.53
437 438 5.014123 CCACTATGGGAGAAATATGCCCTAA 59.986 44.000 0.00 0.00 42.52 2.69
438 439 5.940470 CACTATGGGAGAAATATGCCCTAAC 59.060 44.000 0.00 0.00 42.52 2.34
439 440 5.610982 ACTATGGGAGAAATATGCCCTAACA 59.389 40.000 0.00 0.00 42.52 2.41
440 441 4.164843 TGGGAGAAATATGCCCTAACAC 57.835 45.455 0.00 0.00 42.52 3.32
441 442 3.785887 TGGGAGAAATATGCCCTAACACT 59.214 43.478 0.00 0.00 42.52 3.55
442 443 4.972568 TGGGAGAAATATGCCCTAACACTA 59.027 41.667 0.00 0.00 42.52 2.74
443 444 5.163237 TGGGAGAAATATGCCCTAACACTAC 60.163 44.000 0.00 0.00 42.52 2.73
444 445 5.071923 GGGAGAAATATGCCCTAACACTACT 59.928 44.000 0.00 0.00 38.85 2.57
445 446 6.409349 GGGAGAAATATGCCCTAACACTACTT 60.409 42.308 0.00 0.00 38.85 2.24
446 447 7.202066 GGGAGAAATATGCCCTAACACTACTTA 60.202 40.741 0.00 0.00 38.85 2.24
447 448 8.208903 GGAGAAATATGCCCTAACACTACTTAA 58.791 37.037 0.00 0.00 0.00 1.85
448 449 9.262358 GAGAAATATGCCCTAACACTACTTAAG 57.738 37.037 0.00 0.00 0.00 1.85
449 450 7.715686 AGAAATATGCCCTAACACTACTTAAGC 59.284 37.037 1.29 0.00 0.00 3.09
450 451 3.241067 TGCCCTAACACTACTTAAGCG 57.759 47.619 1.29 0.00 0.00 4.68
451 452 2.093869 TGCCCTAACACTACTTAAGCGG 60.094 50.000 1.29 0.00 0.00 5.52
452 453 2.093816 GCCCTAACACTACTTAAGCGGT 60.094 50.000 1.29 0.00 0.00 5.68
453 454 3.518590 CCCTAACACTACTTAAGCGGTG 58.481 50.000 20.04 20.04 35.99 4.94
454 455 3.194116 CCCTAACACTACTTAAGCGGTGA 59.806 47.826 25.30 10.58 34.28 4.02
455 456 4.171754 CCTAACACTACTTAAGCGGTGAC 58.828 47.826 25.30 0.00 34.28 3.67
456 457 3.738830 AACACTACTTAAGCGGTGACA 57.261 42.857 25.30 0.00 34.28 3.58
457 458 3.738830 ACACTACTTAAGCGGTGACAA 57.261 42.857 25.30 0.00 34.28 3.18
458 459 4.267349 ACACTACTTAAGCGGTGACAAT 57.733 40.909 25.30 8.56 34.28 2.71
459 460 4.243270 ACACTACTTAAGCGGTGACAATC 58.757 43.478 25.30 0.00 34.28 2.67
460 461 4.021368 ACACTACTTAAGCGGTGACAATCT 60.021 41.667 25.30 7.76 34.28 2.40
461 462 4.327357 CACTACTTAAGCGGTGACAATCTG 59.673 45.833 18.04 0.00 32.12 2.90
462 463 2.699954 ACTTAAGCGGTGACAATCTGG 58.300 47.619 1.29 0.00 0.00 3.86
463 464 2.038557 ACTTAAGCGGTGACAATCTGGT 59.961 45.455 1.29 0.00 0.00 4.00
464 465 2.380084 TAAGCGGTGACAATCTGGTC 57.620 50.000 0.00 0.00 38.29 4.02
465 466 0.396435 AAGCGGTGACAATCTGGTCA 59.604 50.000 0.00 0.00 45.06 4.02
475 476 6.367374 TGACAATCTGGTCACCTATTTACA 57.633 37.500 0.00 0.00 42.56 2.41
476 477 6.170506 TGACAATCTGGTCACCTATTTACAC 58.829 40.000 0.00 0.00 42.56 2.90
489 490 5.789054 ACCTATTTACACCACCTAGTTTCCT 59.211 40.000 0.00 0.00 0.00 3.36
490 491 6.961721 ACCTATTTACACCACCTAGTTTCCTA 59.038 38.462 0.00 0.00 0.00 2.94
491 492 7.626487 ACCTATTTACACCACCTAGTTTCCTAT 59.374 37.037 0.00 0.00 0.00 2.57
492 493 7.931948 CCTATTTACACCACCTAGTTTCCTATG 59.068 40.741 0.00 0.00 0.00 2.23
503 505 8.076178 CACCTAGTTTCCTATGAAAACAACTTG 58.924 37.037 0.00 0.00 41.92 3.16
520 522 2.699846 ACTTGCTTGGCTTTGGATTTGA 59.300 40.909 0.00 0.00 0.00 2.69
525 527 4.527816 TGCTTGGCTTTGGATTTGATAAGT 59.472 37.500 0.00 0.00 0.00 2.24
566 568 8.844865 ATAAGATTGGGATAAAGAAAAGGCTT 57.155 30.769 0.00 0.00 0.00 4.35
579 581 6.471233 AGAAAAGGCTTATTTATCTTGGGC 57.529 37.500 0.00 0.00 0.00 5.36
587 589 7.068716 AGGCTTATTTATCTTGGGCTTAAACTG 59.931 37.037 0.00 0.00 0.00 3.16
596 598 2.165167 GGGCTTAAACTGGTTACCCAC 58.835 52.381 6.33 0.00 35.17 4.61
602 604 2.200373 AACTGGTTACCCACTCATGC 57.800 50.000 0.00 0.00 35.17 4.06
603 605 0.328258 ACTGGTTACCCACTCATGCC 59.672 55.000 0.00 0.00 35.17 4.40
606 608 0.462047 GGTTACCCACTCATGCCTCG 60.462 60.000 0.00 0.00 0.00 4.63
620 622 3.620427 TGCCTCGGTAAAGCTATTGAA 57.380 42.857 0.00 0.00 0.00 2.69
622 624 3.267483 GCCTCGGTAAAGCTATTGAACA 58.733 45.455 0.00 0.00 0.00 3.18
663 665 0.923358 GTGGGTGATATGGGTTGGGA 59.077 55.000 0.00 0.00 0.00 4.37
664 666 1.133792 GTGGGTGATATGGGTTGGGAG 60.134 57.143 0.00 0.00 0.00 4.30
667 669 0.478507 GTGATATGGGTTGGGAGGGG 59.521 60.000 0.00 0.00 0.00 4.79
670 672 2.600247 ATATGGGTTGGGAGGGGGCT 62.600 60.000 0.00 0.00 0.00 5.19
724 730 8.958119 TTTGTATCTCGGTAAAGCTATTGAAT 57.042 30.769 0.00 0.00 0.00 2.57
789 796 3.549221 CCCGTTGAAATGTTGCGTAAACT 60.549 43.478 0.00 0.00 39.70 2.66
847 854 2.352001 TCGCGAGCGATCGTAAGC 60.352 61.111 25.15 17.14 44.01 3.09
848 855 2.650917 CGCGAGCGATCGTAAGCA 60.651 61.111 25.15 0.00 42.83 3.91
849 856 2.221552 CGCGAGCGATCGTAAGCAA 61.222 57.895 25.15 0.00 42.83 3.91
936 949 4.732443 TCCATCTCCTCTACTCTTCCCTAA 59.268 45.833 0.00 0.00 0.00 2.69
939 952 3.779183 TCTCCTCTACTCTTCCCTAACGA 59.221 47.826 0.00 0.00 0.00 3.85
995 1008 1.073025 ATGGTTGCCTCACTCGCAA 59.927 52.632 0.00 0.00 43.71 4.85
1001 1014 0.035317 TGCCTCACTCGCAAGTTGAT 59.965 50.000 7.16 0.00 31.71 2.57
1006 1019 1.069978 TCACTCGCAAGTTGATGGTGA 59.930 47.619 7.16 12.94 31.71 4.02
1018 1031 2.608623 TGATGGTGAGGAGTGAAGTGA 58.391 47.619 0.00 0.00 0.00 3.41
1034 1047 6.429385 AGTGAAGTGAAGCCTTCTCTAATTTG 59.571 38.462 9.29 0.00 41.20 2.32
1047 1060 3.130633 TCTAATTTGGCGGTGATGATCG 58.869 45.455 0.00 0.00 0.00 3.69
1063 1077 7.381678 GGTGATGATCGGTAACTTACTATGTTC 59.618 40.741 0.00 0.00 0.00 3.18
1083 1097 7.364522 TGTTCACATGTCTAGCTTTATGTTC 57.635 36.000 0.00 0.00 31.84 3.18
1096 1110 4.319477 GCTTTATGTTCGTTGCAGTTCTGA 60.319 41.667 3.84 0.00 0.00 3.27
1117 1131 2.500392 AAATACTTGCGGGTAAGGCA 57.500 45.000 1.72 0.00 38.93 4.75
1118 1132 2.729028 AATACTTGCGGGTAAGGCAT 57.271 45.000 1.72 0.00 40.62 4.40
1162 1176 9.535170 CTTCTATATATGAAACCCTCTCTACCA 57.465 37.037 0.00 0.00 0.00 3.25
1186 1200 2.251600 GATGATTCATCGGCCAGCC 58.748 57.895 10.75 0.00 31.01 4.85
1219 1237 4.031611 AGGGGGTGACACTATACTTCTTC 58.968 47.826 5.39 0.00 0.00 2.87
1225 1243 5.045797 GGTGACACTATACTTCTTCCCCTTT 60.046 44.000 5.39 0.00 0.00 3.11
1239 1257 2.026075 TCCCCTTTGGTTTACCCATACG 60.026 50.000 0.00 0.00 44.74 3.06
1273 1291 5.855045 TCTTCCTATATCCCTTTCTTTCGC 58.145 41.667 0.00 0.00 0.00 4.70
1303 1321 3.924114 TTTTCTCCTCCGCATCCATTA 57.076 42.857 0.00 0.00 0.00 1.90
1310 1328 2.026915 CCTCCGCATCCATTATCATCCA 60.027 50.000 0.00 0.00 0.00 3.41
1320 1338 7.596494 CATCCATTATCATCCAACAATACCAC 58.404 38.462 0.00 0.00 0.00 4.16
1355 1373 3.135530 AGCAGATGGGTAACTTCATCTCC 59.864 47.826 3.19 0.00 45.68 3.71
1371 1389 2.191846 TCCCCTCCCTTCCCTCCTT 61.192 63.158 0.00 0.00 0.00 3.36
1372 1390 2.003548 CCCCTCCCTTCCCTCCTTG 61.004 68.421 0.00 0.00 0.00 3.61
1375 1393 1.135960 CCTCCCTTCCCTCCTTGATC 58.864 60.000 0.00 0.00 0.00 2.92
1412 1430 3.978718 TGCTCAGATCTACTCATGTCG 57.021 47.619 0.00 0.00 0.00 4.35
1414 1432 3.313803 TGCTCAGATCTACTCATGTCGAC 59.686 47.826 9.11 9.11 0.00 4.20
1416 1434 4.201960 GCTCAGATCTACTCATGTCGACAA 60.202 45.833 24.13 5.99 0.00 3.18
1432 1483 9.773328 CATGTCGACAATATAACAAGTTTCATT 57.227 29.630 24.13 0.00 0.00 2.57
1447 1498 9.533253 ACAAGTTTCATTGTTAGGATTTTTCTG 57.467 29.630 0.00 0.00 40.47 3.02
1468 1519 5.707764 TCTGTCTAGATAGATGACCGGATTG 59.292 44.000 14.64 0.00 34.39 2.67
1476 1527 0.104120 ATGACCGGATTGAATCGCGA 59.896 50.000 13.09 13.09 0.00 5.87
1485 1536 5.415366 CGGATTGAATCGCGATATTATTCG 58.585 41.667 24.00 20.03 41.99 3.34
1495 1546 5.176223 TCGCGATATTATTCGGAAGTTTTCC 59.824 40.000 3.71 0.00 46.62 3.13
1527 1578 3.859411 AAGCACTCTAGACCGAAGAAG 57.141 47.619 0.00 0.00 0.00 2.85
1529 1580 1.202582 GCACTCTAGACCGAAGAAGCA 59.797 52.381 0.00 0.00 0.00 3.91
1531 1582 2.750166 CACTCTAGACCGAAGAAGCAGA 59.250 50.000 0.00 0.00 0.00 4.26
1546 1604 6.596309 AGAAGCAGATTTTTCTTTTAGGGG 57.404 37.500 0.00 0.00 29.64 4.79
1549 1607 5.645201 AGCAGATTTTTCTTTTAGGGGAGT 58.355 37.500 0.00 0.00 0.00 3.85
1560 1618 5.370289 TCTTTTAGGGGAGTTGTCCAGTTAA 59.630 40.000 0.00 0.00 46.07 2.01
1585 1643 2.680370 CCCCCAGGTGAGCTTACCC 61.680 68.421 23.23 6.60 41.83 3.69
1596 1654 0.251634 AGCTTACCCTCTTGCAGCTC 59.748 55.000 0.00 0.00 35.95 4.09
1659 1717 0.491823 TGAGGAGAAAGACCTGGGGA 59.508 55.000 0.00 0.00 37.93 4.81
1681 1739 8.624776 GGGGAAGATGATGTAATTTCTAACTTG 58.375 37.037 0.00 0.00 0.00 3.16
1791 1849 0.517316 GTGAAACCAGGCGCAGTAAG 59.483 55.000 10.83 0.00 0.00 2.34
2151 2210 1.976474 GCCGGGCTTTCCATGTGAA 60.976 57.895 12.87 0.00 34.36 3.18
2165 2224 1.070105 GTGAAGGGTGCCGTGTGTA 59.930 57.895 0.00 0.00 0.00 2.90
2205 2264 3.123620 CTGCGTGCTCTCCCTTGC 61.124 66.667 0.00 0.00 0.00 4.01
2261 2320 4.664677 ACCTCTGTGGACGCACGC 62.665 66.667 2.23 0.00 39.71 5.34
2308 2367 0.334676 CTGGGCCTTTATCAACCCCA 59.665 55.000 4.53 0.00 43.19 4.96
2334 2393 4.755507 TGCCATTGCCATCCGCCA 62.756 61.111 0.00 0.00 36.24 5.69
2335 2394 3.908081 GCCATTGCCATCCGCCAG 61.908 66.667 0.00 0.00 36.24 4.85
2336 2395 3.908081 CCATTGCCATCCGCCAGC 61.908 66.667 0.00 0.00 36.24 4.85
2337 2396 4.260355 CATTGCCATCCGCCAGCG 62.260 66.667 4.75 4.75 36.24 5.18
2384 2443 2.115427 TGTTTGTGTGAGAGTGAGGGA 58.885 47.619 0.00 0.00 0.00 4.20
2452 2729 5.301805 TGAGATGGCGATATTCTACTCACAA 59.698 40.000 0.00 0.00 0.00 3.33
2846 3126 1.003355 TTCTTTCCCAGGAGCAGCG 60.003 57.895 0.00 0.00 0.00 5.18
3074 3595 3.771577 AGCAGCATCAGATGATGATCA 57.228 42.857 29.04 0.00 46.98 2.92
3157 3678 0.608640 ACAAGGACGACATCAGGGAC 59.391 55.000 0.00 0.00 0.00 4.46
3514 4060 0.531532 AAGCCTGAATGCTCGATCCG 60.532 55.000 0.00 0.00 41.80 4.18
3628 4179 4.084287 CCCGGTTCATATGCTACCTACTA 58.916 47.826 18.76 0.00 0.00 1.82
3844 4912 1.174712 CCTCCATAATGCCAAGCCCG 61.175 60.000 0.00 0.00 0.00 6.13
3905 4973 0.541863 CTGGTTTGAGATAGCGGGGT 59.458 55.000 0.00 0.00 0.00 4.95
4029 5097 6.105397 AGTTCTAGGTTGGTCGTTTGATTA 57.895 37.500 0.00 0.00 0.00 1.75
4102 5170 5.106830 CCAATCTGCTGGAAAATTTCTTTGC 60.107 40.000 5.65 8.09 38.96 3.68
4177 5245 0.543749 GGGCATGACACTCTAAGGCT 59.456 55.000 0.00 0.00 0.00 4.58
4182 5250 3.791245 CATGACACTCTAAGGCTTCCTC 58.209 50.000 1.30 0.00 30.89 3.71
4185 5267 2.167487 GACACTCTAAGGCTTCCTCTGG 59.833 54.545 1.30 0.00 30.89 3.86
4193 5275 4.637387 AAGGCTTCCTCTGGATATCATG 57.363 45.455 4.83 0.00 30.89 3.07
4194 5276 3.866816 AGGCTTCCTCTGGATATCATGA 58.133 45.455 4.83 0.00 0.00 3.07
4302 5385 7.921786 TTTTGTCATTGAGTCTAGGGTAATG 57.078 36.000 0.00 0.00 0.00 1.90
4348 5432 8.582437 CGAAGTATTGGTTCCTATCCTACATAA 58.418 37.037 0.00 0.00 0.00 1.90
4355 5439 9.670442 TTGGTTCCTATCCTACATAAGAATAGT 57.330 33.333 0.00 0.00 0.00 2.12
4455 5539 2.616510 CCTACAGACCAAAGGAAGCCTG 60.617 54.545 0.00 0.00 32.13 4.85
4456 5540 0.111253 ACAGACCAAAGGAAGCCTGG 59.889 55.000 0.00 0.00 32.13 4.45
4466 5550 3.567478 AGGAAGCCTGGTCATGTATTC 57.433 47.619 0.00 0.00 29.57 1.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.513836 GAGCGGTAGTAGGGCGGTAG 61.514 65.000 0.00 0.00 0.00 3.18
1 2 1.526917 GAGCGGTAGTAGGGCGGTA 60.527 63.158 0.00 0.00 0.00 4.02
2 3 2.832201 GAGCGGTAGTAGGGCGGT 60.832 66.667 0.00 0.00 0.00 5.68
3 4 1.745320 AATGAGCGGTAGTAGGGCGG 61.745 60.000 0.00 0.00 0.00 6.13
4 5 0.104304 AAATGAGCGGTAGTAGGGCG 59.896 55.000 0.00 0.00 0.00 6.13
5 6 2.101917 TGTAAATGAGCGGTAGTAGGGC 59.898 50.000 0.00 0.00 0.00 5.19
6 7 4.395959 TTGTAAATGAGCGGTAGTAGGG 57.604 45.455 0.00 0.00 0.00 3.53
7 8 4.270325 GCTTTGTAAATGAGCGGTAGTAGG 59.730 45.833 0.00 0.00 0.00 3.18
8 9 4.868171 TGCTTTGTAAATGAGCGGTAGTAG 59.132 41.667 0.00 0.00 39.23 2.57
9 10 4.628333 GTGCTTTGTAAATGAGCGGTAGTA 59.372 41.667 0.00 0.00 39.23 1.82
10 11 3.435671 GTGCTTTGTAAATGAGCGGTAGT 59.564 43.478 0.00 0.00 39.23 2.73
11 12 3.684788 AGTGCTTTGTAAATGAGCGGTAG 59.315 43.478 0.00 0.00 39.23 3.18
12 13 3.670625 AGTGCTTTGTAAATGAGCGGTA 58.329 40.909 0.00 0.00 39.23 4.02
13 14 2.504367 AGTGCTTTGTAAATGAGCGGT 58.496 42.857 0.00 0.00 39.23 5.68
14 15 4.678509 TTAGTGCTTTGTAAATGAGCGG 57.321 40.909 0.00 0.00 39.23 5.52
15 16 6.984740 TTTTTAGTGCTTTGTAAATGAGCG 57.015 33.333 0.00 0.00 39.23 5.03
16 17 9.076596 CCTATTTTTAGTGCTTTGTAAATGAGC 57.923 33.333 0.00 0.00 36.95 4.26
18 19 9.906660 CACCTATTTTTAGTGCTTTGTAAATGA 57.093 29.630 0.00 0.00 0.00 2.57
19 20 9.139174 CCACCTATTTTTAGTGCTTTGTAAATG 57.861 33.333 0.00 0.00 0.00 2.32
20 21 9.084533 TCCACCTATTTTTAGTGCTTTGTAAAT 57.915 29.630 0.00 0.00 0.00 1.40
21 22 8.466617 TCCACCTATTTTTAGTGCTTTGTAAA 57.533 30.769 0.00 0.00 0.00 2.01
22 23 8.466617 TTCCACCTATTTTTAGTGCTTTGTAA 57.533 30.769 0.00 0.00 0.00 2.41
23 24 7.722285 ACTTCCACCTATTTTTAGTGCTTTGTA 59.278 33.333 0.00 0.00 0.00 2.41
24 25 6.549736 ACTTCCACCTATTTTTAGTGCTTTGT 59.450 34.615 0.00 0.00 0.00 2.83
25 26 6.863126 CACTTCCACCTATTTTTAGTGCTTTG 59.137 38.462 0.00 0.00 0.00 2.77
26 27 6.981722 CACTTCCACCTATTTTTAGTGCTTT 58.018 36.000 0.00 0.00 0.00 3.51
27 28 6.575162 CACTTCCACCTATTTTTAGTGCTT 57.425 37.500 0.00 0.00 0.00 3.91
29 30 4.733850 GCACTTCCACCTATTTTTAGTGC 58.266 43.478 0.00 0.00 46.62 4.40
30 31 4.764823 TGGCACTTCCACCTATTTTTAGTG 59.235 41.667 0.00 0.00 40.72 2.74
31 32 4.993028 TGGCACTTCCACCTATTTTTAGT 58.007 39.130 0.00 0.00 40.72 2.24
32 33 5.010282 ACTGGCACTTCCACCTATTTTTAG 58.990 41.667 0.00 0.00 40.72 1.85
33 34 4.993028 ACTGGCACTTCCACCTATTTTTA 58.007 39.130 0.00 0.00 40.72 1.52
34 35 3.844640 ACTGGCACTTCCACCTATTTTT 58.155 40.909 0.00 0.00 40.72 1.94
35 36 3.525800 ACTGGCACTTCCACCTATTTT 57.474 42.857 0.00 0.00 40.72 1.82
36 37 3.622455 GCTACTGGCACTTCCACCTATTT 60.622 47.826 0.00 0.00 40.72 1.40
37 38 2.092914 GCTACTGGCACTTCCACCTATT 60.093 50.000 0.00 0.00 40.72 1.73
38 39 1.486726 GCTACTGGCACTTCCACCTAT 59.513 52.381 0.00 0.00 40.72 2.57
39 40 0.902531 GCTACTGGCACTTCCACCTA 59.097 55.000 0.00 0.00 40.72 3.08
40 41 1.679898 GCTACTGGCACTTCCACCT 59.320 57.895 0.00 0.00 40.72 4.00
41 42 4.303257 GCTACTGGCACTTCCACC 57.697 61.111 0.00 0.00 40.72 4.61
49 50 0.758734 ACAGTTCAGTGCTACTGGCA 59.241 50.000 21.65 0.00 45.94 4.92
50 51 1.151668 CACAGTTCAGTGCTACTGGC 58.848 55.000 21.65 8.93 45.94 4.85
51 52 1.800805 CCACAGTTCAGTGCTACTGG 58.199 55.000 21.65 13.82 45.94 4.00
52 53 5.912184 ACTGCCACAGTTCAGTGCTACTG 62.912 52.174 18.21 18.21 42.59 2.74
53 54 0.758734 TGCCACAGTTCAGTGCTACT 59.241 50.000 0.00 0.00 38.18 2.57
54 55 1.151668 CTGCCACAGTTCAGTGCTAC 58.848 55.000 0.00 0.00 38.18 3.58
55 56 0.758734 ACTGCCACAGTTCAGTGCTA 59.241 50.000 4.77 0.00 42.59 3.49
56 57 0.758734 TACTGCCACAGTTCAGTGCT 59.241 50.000 5.44 0.00 42.59 4.40
57 58 0.868406 GTACTGCCACAGTTCAGTGC 59.132 55.000 5.44 9.32 42.59 4.40
58 59 1.512926 GGTACTGCCACAGTTCAGTG 58.487 55.000 5.44 0.00 42.59 3.66
59 60 0.033504 CGGTACTGCCACAGTTCAGT 59.966 55.000 5.44 9.51 42.59 3.41
60 61 1.291877 GCGGTACTGCCACAGTTCAG 61.292 60.000 16.25 3.06 42.59 3.02
61 62 1.301401 GCGGTACTGCCACAGTTCA 60.301 57.895 16.25 0.00 42.59 3.18
62 63 1.004918 AGCGGTACTGCCACAGTTC 60.005 57.895 23.09 0.56 42.59 3.01
63 64 1.301716 CAGCGGTACTGCCACAGTT 60.302 57.895 23.09 0.00 42.59 3.16
65 66 2.434884 CCAGCGGTACTGCCACAG 60.435 66.667 23.09 10.58 45.78 3.66
66 67 2.920384 TCCAGCGGTACTGCCACA 60.920 61.111 23.09 3.98 45.78 4.17
67 68 2.125512 CTCCAGCGGTACTGCCAC 60.126 66.667 23.09 0.00 45.78 5.01
68 69 4.082523 GCTCCAGCGGTACTGCCA 62.083 66.667 23.09 6.73 45.78 4.92
86 87 0.172803 CTCTGCACCACGGTAGTACC 59.827 60.000 9.50 9.50 34.05 3.34
87 88 0.458025 GCTCTGCACCACGGTAGTAC 60.458 60.000 0.00 0.00 0.00 2.73
88 89 1.888018 GCTCTGCACCACGGTAGTA 59.112 57.895 0.00 0.00 0.00 1.82
89 90 2.657237 GCTCTGCACCACGGTAGT 59.343 61.111 0.00 0.00 0.00 2.73
90 91 2.507102 CGCTCTGCACCACGGTAG 60.507 66.667 0.00 0.00 0.00 3.18
91 92 4.063967 CCGCTCTGCACCACGGTA 62.064 66.667 8.09 0.00 40.77 4.02
94 95 2.809601 GTACCGCTCTGCACCACG 60.810 66.667 0.00 0.00 0.00 4.94
95 96 1.446272 GAGTACCGCTCTGCACCAC 60.446 63.158 0.00 0.00 40.98 4.16
96 97 2.646175 GGAGTACCGCTCTGCACCA 61.646 63.158 0.00 0.00 43.62 4.17
97 98 2.184579 GGAGTACCGCTCTGCACC 59.815 66.667 0.00 0.00 43.62 5.01
98 99 2.184579 GGGAGTACCGCTCTGCAC 59.815 66.667 0.00 0.00 43.62 4.57
107 108 0.532196 GGCACATAAGCGGGAGTACC 60.532 60.000 0.00 0.00 34.64 3.34
108 109 0.464452 AGGCACATAAGCGGGAGTAC 59.536 55.000 0.00 0.00 34.64 2.73
109 110 1.200519 AAGGCACATAAGCGGGAGTA 58.799 50.000 0.00 0.00 34.64 2.59
110 111 1.139058 CTAAGGCACATAAGCGGGAGT 59.861 52.381 0.00 0.00 34.64 3.85
111 112 1.541233 CCTAAGGCACATAAGCGGGAG 60.541 57.143 0.00 0.00 34.64 4.30
112 113 0.468226 CCTAAGGCACATAAGCGGGA 59.532 55.000 0.00 0.00 34.64 5.14
113 114 0.468226 TCCTAAGGCACATAAGCGGG 59.532 55.000 0.00 0.00 34.64 6.13
114 115 2.325583 TTCCTAAGGCACATAAGCGG 57.674 50.000 0.00 0.00 34.64 5.52
115 116 3.251004 GGATTTCCTAAGGCACATAAGCG 59.749 47.826 0.00 0.00 34.64 4.68
116 117 3.570125 GGGATTTCCTAAGGCACATAAGC 59.430 47.826 0.00 0.00 35.95 3.09
117 118 4.792068 TGGGATTTCCTAAGGCACATAAG 58.208 43.478 0.00 0.00 36.20 1.73
118 119 4.871871 TGGGATTTCCTAAGGCACATAA 57.128 40.909 0.00 0.00 36.20 1.90
119 120 4.728772 CATGGGATTTCCTAAGGCACATA 58.271 43.478 0.00 0.00 36.20 2.29
120 121 3.569491 CATGGGATTTCCTAAGGCACAT 58.431 45.455 0.00 0.00 36.20 3.21
121 122 2.949963 GCATGGGATTTCCTAAGGCACA 60.950 50.000 0.00 0.00 33.30 4.57
122 123 1.683385 GCATGGGATTTCCTAAGGCAC 59.317 52.381 0.00 0.00 33.30 5.01
123 124 1.287442 TGCATGGGATTTCCTAAGGCA 59.713 47.619 8.08 8.08 38.09 4.75
124 125 1.683385 GTGCATGGGATTTCCTAAGGC 59.317 52.381 0.00 0.39 36.20 4.35
125 126 3.017048 TGTGCATGGGATTTCCTAAGG 57.983 47.619 0.00 0.00 36.20 2.69
126 127 3.382546 CCTTGTGCATGGGATTTCCTAAG 59.617 47.826 0.00 0.00 36.20 2.18
127 128 3.011144 TCCTTGTGCATGGGATTTCCTAA 59.989 43.478 0.00 0.00 36.20 2.69
128 129 2.580322 TCCTTGTGCATGGGATTTCCTA 59.420 45.455 0.00 0.00 36.20 2.94
129 130 1.358787 TCCTTGTGCATGGGATTTCCT 59.641 47.619 0.00 0.00 36.20 3.36
130 131 1.851304 TCCTTGTGCATGGGATTTCC 58.149 50.000 0.00 0.00 0.00 3.13
131 132 2.167075 CCTTCCTTGTGCATGGGATTTC 59.833 50.000 6.18 0.00 0.00 2.17
132 133 2.181975 CCTTCCTTGTGCATGGGATTT 58.818 47.619 6.18 0.00 0.00 2.17
133 134 1.358787 TCCTTCCTTGTGCATGGGATT 59.641 47.619 6.18 0.00 0.00 3.01
134 135 1.002069 TCCTTCCTTGTGCATGGGAT 58.998 50.000 6.18 0.00 0.00 3.85
135 136 0.038166 GTCCTTCCTTGTGCATGGGA 59.962 55.000 0.00 0.00 0.00 4.37
136 137 0.251297 TGTCCTTCCTTGTGCATGGG 60.251 55.000 0.00 0.00 0.00 4.00
137 138 1.542915 CTTGTCCTTCCTTGTGCATGG 59.457 52.381 0.00 0.00 0.00 3.66
138 139 1.068055 GCTTGTCCTTCCTTGTGCATG 60.068 52.381 0.00 0.00 0.00 4.06
139 140 1.202976 AGCTTGTCCTTCCTTGTGCAT 60.203 47.619 0.00 0.00 0.00 3.96
140 141 0.183492 AGCTTGTCCTTCCTTGTGCA 59.817 50.000 0.00 0.00 0.00 4.57
141 142 0.877743 GAGCTTGTCCTTCCTTGTGC 59.122 55.000 0.00 0.00 0.00 4.57
142 143 1.528129 GGAGCTTGTCCTTCCTTGTG 58.472 55.000 0.00 0.00 42.99 3.33
152 153 2.409870 CCCGGCAATGGAGCTTGTC 61.410 63.158 0.00 0.00 34.17 3.18
153 154 2.361610 CCCGGCAATGGAGCTTGT 60.362 61.111 0.00 0.00 34.17 3.16
154 155 1.660560 CTTCCCGGCAATGGAGCTTG 61.661 60.000 0.00 0.00 32.37 4.01
155 156 1.379044 CTTCCCGGCAATGGAGCTT 60.379 57.895 0.00 0.00 32.37 3.74
156 157 1.852157 TTCTTCCCGGCAATGGAGCT 61.852 55.000 0.00 0.00 32.37 4.09
157 158 0.965363 TTTCTTCCCGGCAATGGAGC 60.965 55.000 0.00 0.00 32.37 4.70
158 159 1.474077 CTTTTCTTCCCGGCAATGGAG 59.526 52.381 0.00 0.00 32.37 3.86
159 160 1.074727 TCTTTTCTTCCCGGCAATGGA 59.925 47.619 0.00 0.00 0.00 3.41
160 161 1.474077 CTCTTTTCTTCCCGGCAATGG 59.526 52.381 0.00 0.00 0.00 3.16
161 162 1.474077 CCTCTTTTCTTCCCGGCAATG 59.526 52.381 0.00 0.00 0.00 2.82
162 163 1.616994 CCCTCTTTTCTTCCCGGCAAT 60.617 52.381 0.00 0.00 0.00 3.56
163 164 0.251165 CCCTCTTTTCTTCCCGGCAA 60.251 55.000 0.00 0.00 0.00 4.52
164 165 1.378762 CCCTCTTTTCTTCCCGGCA 59.621 57.895 0.00 0.00 0.00 5.69
165 166 0.616891 TACCCTCTTTTCTTCCCGGC 59.383 55.000 0.00 0.00 0.00 6.13
166 167 1.626825 TGTACCCTCTTTTCTTCCCGG 59.373 52.381 0.00 0.00 0.00 5.73
167 168 3.412237 TTGTACCCTCTTTTCTTCCCG 57.588 47.619 0.00 0.00 0.00 5.14
168 169 5.831525 TCTTTTTGTACCCTCTTTTCTTCCC 59.168 40.000 0.00 0.00 0.00 3.97
169 170 6.546403 AGTCTTTTTGTACCCTCTTTTCTTCC 59.454 38.462 0.00 0.00 0.00 3.46
170 171 7.067129 ACAGTCTTTTTGTACCCTCTTTTCTTC 59.933 37.037 0.00 0.00 0.00 2.87
171 172 6.890268 ACAGTCTTTTTGTACCCTCTTTTCTT 59.110 34.615 0.00 0.00 0.00 2.52
172 173 6.318900 CACAGTCTTTTTGTACCCTCTTTTCT 59.681 38.462 0.00 0.00 0.00 2.52
173 174 6.095021 ACACAGTCTTTTTGTACCCTCTTTTC 59.905 38.462 0.00 0.00 0.00 2.29
174 175 5.949952 ACACAGTCTTTTTGTACCCTCTTTT 59.050 36.000 0.00 0.00 0.00 2.27
175 176 5.506708 ACACAGTCTTTTTGTACCCTCTTT 58.493 37.500 0.00 0.00 0.00 2.52
176 177 5.112129 ACACAGTCTTTTTGTACCCTCTT 57.888 39.130 0.00 0.00 0.00 2.85
177 178 4.772886 ACACAGTCTTTTTGTACCCTCT 57.227 40.909 0.00 0.00 0.00 3.69
178 179 5.995897 ACATACACAGTCTTTTTGTACCCTC 59.004 40.000 0.00 0.00 0.00 4.30
179 180 5.763204 CACATACACAGTCTTTTTGTACCCT 59.237 40.000 0.00 0.00 0.00 4.34
180 181 5.529800 ACACATACACAGTCTTTTTGTACCC 59.470 40.000 0.00 0.00 0.00 3.69
181 182 6.613755 ACACATACACAGTCTTTTTGTACC 57.386 37.500 0.00 0.00 0.00 3.34
182 183 7.690228 TCAACACATACACAGTCTTTTTGTAC 58.310 34.615 0.00 0.00 0.00 2.90
183 184 7.851387 TCAACACATACACAGTCTTTTTGTA 57.149 32.000 0.00 0.00 0.00 2.41
184 185 6.751514 TCAACACATACACAGTCTTTTTGT 57.248 33.333 0.00 0.00 0.00 2.83
185 186 7.379529 GGAATCAACACATACACAGTCTTTTTG 59.620 37.037 0.00 0.00 0.00 2.44
186 187 7.068103 TGGAATCAACACATACACAGTCTTTTT 59.932 33.333 0.00 0.00 0.00 1.94
187 188 6.545666 TGGAATCAACACATACACAGTCTTTT 59.454 34.615 0.00 0.00 0.00 2.27
188 189 6.017109 GTGGAATCAACACATACACAGTCTTT 60.017 38.462 0.00 0.00 38.67 2.52
189 190 5.470098 GTGGAATCAACACATACACAGTCTT 59.530 40.000 0.00 0.00 38.67 3.01
190 191 4.997395 GTGGAATCAACACATACACAGTCT 59.003 41.667 0.00 0.00 38.67 3.24
191 192 4.154195 GGTGGAATCAACACATACACAGTC 59.846 45.833 0.00 0.00 40.54 3.51
192 193 4.072131 GGTGGAATCAACACATACACAGT 58.928 43.478 0.00 0.00 40.54 3.55
193 194 3.440173 GGGTGGAATCAACACATACACAG 59.560 47.826 0.00 0.00 40.54 3.66
194 195 3.181439 TGGGTGGAATCAACACATACACA 60.181 43.478 0.00 0.00 40.54 3.72
195 196 3.417101 TGGGTGGAATCAACACATACAC 58.583 45.455 0.00 0.00 40.54 2.90
196 197 3.797559 TGGGTGGAATCAACACATACA 57.202 42.857 0.00 0.00 40.54 2.29
197 198 4.279671 TGTTTGGGTGGAATCAACACATAC 59.720 41.667 6.65 6.65 40.54 2.39
198 199 4.474394 TGTTTGGGTGGAATCAACACATA 58.526 39.130 0.00 0.00 40.54 2.29
199 200 3.303938 TGTTTGGGTGGAATCAACACAT 58.696 40.909 0.00 0.00 40.54 3.21
200 201 2.739943 TGTTTGGGTGGAATCAACACA 58.260 42.857 0.00 0.00 40.54 3.72
201 202 4.335400 AATGTTTGGGTGGAATCAACAC 57.665 40.909 0.00 0.00 38.10 3.32
202 203 5.365021 AAAATGTTTGGGTGGAATCAACA 57.635 34.783 0.00 0.00 30.63 3.33
203 204 5.819901 TCAAAAATGTTTGGGTGGAATCAAC 59.180 36.000 8.51 0.00 43.70 3.18
204 205 5.994250 TCAAAAATGTTTGGGTGGAATCAA 58.006 33.333 8.51 0.00 43.70 2.57
205 206 5.620738 TCAAAAATGTTTGGGTGGAATCA 57.379 34.783 8.51 0.00 43.70 2.57
206 207 5.049474 GCTTCAAAAATGTTTGGGTGGAATC 60.049 40.000 8.51 0.00 43.70 2.52
207 208 4.821260 GCTTCAAAAATGTTTGGGTGGAAT 59.179 37.500 8.51 0.00 43.70 3.01
208 209 4.195416 GCTTCAAAAATGTTTGGGTGGAA 58.805 39.130 8.51 0.00 43.70 3.53
209 210 3.739519 CGCTTCAAAAATGTTTGGGTGGA 60.740 43.478 8.51 0.00 43.70 4.02
210 211 2.543430 CGCTTCAAAAATGTTTGGGTGG 59.457 45.455 8.51 0.00 43.70 4.61
211 212 2.543430 CCGCTTCAAAAATGTTTGGGTG 59.457 45.455 8.51 8.24 43.70 4.61
212 213 2.484594 CCCGCTTCAAAAATGTTTGGGT 60.485 45.455 8.51 0.00 43.70 4.51
213 214 2.142319 CCCGCTTCAAAAATGTTTGGG 58.858 47.619 8.51 1.90 43.70 4.12
214 215 1.530720 GCCCGCTTCAAAAATGTTTGG 59.469 47.619 8.51 0.00 43.70 3.28
215 216 1.530720 GGCCCGCTTCAAAAATGTTTG 59.469 47.619 1.55 1.55 44.71 2.93
216 217 1.542328 GGGCCCGCTTCAAAAATGTTT 60.542 47.619 5.69 0.00 0.00 2.83
217 218 0.034756 GGGCCCGCTTCAAAAATGTT 59.965 50.000 5.69 0.00 0.00 2.71
218 219 1.671166 GGGCCCGCTTCAAAAATGT 59.329 52.632 5.69 0.00 0.00 2.71
219 220 1.079197 GGGGCCCGCTTCAAAAATG 60.079 57.895 17.79 0.00 0.00 2.32
220 221 2.290287 GGGGGCCCGCTTCAAAAAT 61.290 57.895 30.90 0.00 0.00 1.82
221 222 2.920384 GGGGGCCCGCTTCAAAAA 60.920 61.111 30.90 0.00 0.00 1.94
222 223 3.879180 GAGGGGGCCCGCTTCAAAA 62.879 63.158 39.24 0.00 41.95 2.44
223 224 4.360405 GAGGGGGCCCGCTTCAAA 62.360 66.667 39.24 0.00 41.95 2.69
229 230 1.375326 CTATTAAGAGGGGGCCCGC 59.625 63.158 31.08 31.08 41.95 6.13
230 231 1.622312 GTACTATTAAGAGGGGGCCCG 59.378 57.143 17.79 0.97 41.95 6.13
231 232 1.622312 CGTACTATTAAGAGGGGGCCC 59.378 57.143 15.76 15.76 0.00 5.80
232 233 1.622312 CCGTACTATTAAGAGGGGGCC 59.378 57.143 1.59 0.00 0.00 5.80
233 234 2.036862 CACCGTACTATTAAGAGGGGGC 59.963 54.545 1.59 0.00 0.00 5.80
234 235 3.569491 TCACCGTACTATTAAGAGGGGG 58.431 50.000 1.59 2.34 0.00 5.40
235 236 4.220163 GGATCACCGTACTATTAAGAGGGG 59.780 50.000 1.59 2.69 0.00 4.79
236 237 5.078256 AGGATCACCGTACTATTAAGAGGG 58.922 45.833 1.59 0.00 41.83 4.30
237 238 6.128336 CGTAGGATCACCGTACTATTAAGAGG 60.128 46.154 1.59 0.00 41.83 3.69
238 239 6.648310 TCGTAGGATCACCGTACTATTAAGAG 59.352 42.308 0.00 0.00 41.83 2.85
239 240 6.425114 GTCGTAGGATCACCGTACTATTAAGA 59.575 42.308 0.00 0.00 41.83 2.10
240 241 6.426328 AGTCGTAGGATCACCGTACTATTAAG 59.574 42.308 0.00 0.00 41.83 1.85
241 242 6.291377 AGTCGTAGGATCACCGTACTATTAA 58.709 40.000 0.00 0.00 41.83 1.40
242 243 5.858381 AGTCGTAGGATCACCGTACTATTA 58.142 41.667 0.00 0.00 41.83 0.98
243 244 4.712476 AGTCGTAGGATCACCGTACTATT 58.288 43.478 0.00 0.00 41.83 1.73
244 245 4.202295 TGAGTCGTAGGATCACCGTACTAT 60.202 45.833 0.00 0.00 41.83 2.12
245 246 3.132824 TGAGTCGTAGGATCACCGTACTA 59.867 47.826 0.00 0.00 41.83 1.82
246 247 2.093288 TGAGTCGTAGGATCACCGTACT 60.093 50.000 0.00 0.00 41.83 2.73
247 248 2.283298 TGAGTCGTAGGATCACCGTAC 58.717 52.381 0.00 0.00 41.83 3.67
248 249 2.696989 TGAGTCGTAGGATCACCGTA 57.303 50.000 0.00 0.00 41.83 4.02
249 250 1.830279 TTGAGTCGTAGGATCACCGT 58.170 50.000 0.00 0.00 41.83 4.83
250 251 2.933495 TTTGAGTCGTAGGATCACCG 57.067 50.000 0.00 0.00 41.83 4.94
251 252 3.132289 TGGATTTGAGTCGTAGGATCACC 59.868 47.826 0.00 0.00 0.00 4.02
252 253 4.113354 GTGGATTTGAGTCGTAGGATCAC 58.887 47.826 0.00 0.00 0.00 3.06
253 254 3.132289 GGTGGATTTGAGTCGTAGGATCA 59.868 47.826 0.00 0.00 0.00 2.92
254 255 3.132289 TGGTGGATTTGAGTCGTAGGATC 59.868 47.826 0.00 0.00 0.00 3.36
255 256 3.104512 TGGTGGATTTGAGTCGTAGGAT 58.895 45.455 0.00 0.00 0.00 3.24
256 257 2.531771 TGGTGGATTTGAGTCGTAGGA 58.468 47.619 0.00 0.00 0.00 2.94
257 258 3.328382 TTGGTGGATTTGAGTCGTAGG 57.672 47.619 0.00 0.00 0.00 3.18
258 259 5.682943 TTTTTGGTGGATTTGAGTCGTAG 57.317 39.130 0.00 0.00 0.00 3.51
259 260 5.765677 TCATTTTTGGTGGATTTGAGTCGTA 59.234 36.000 0.00 0.00 0.00 3.43
260 261 4.582656 TCATTTTTGGTGGATTTGAGTCGT 59.417 37.500 0.00 0.00 0.00 4.34
261 262 5.119931 TCATTTTTGGTGGATTTGAGTCG 57.880 39.130 0.00 0.00 0.00 4.18
262 263 7.442062 ACATTTCATTTTTGGTGGATTTGAGTC 59.558 33.333 0.00 0.00 0.00 3.36
263 264 7.281841 ACATTTCATTTTTGGTGGATTTGAGT 58.718 30.769 0.00 0.00 0.00 3.41
264 265 7.733402 ACATTTCATTTTTGGTGGATTTGAG 57.267 32.000 0.00 0.00 0.00 3.02
265 266 9.270640 CTTACATTTCATTTTTGGTGGATTTGA 57.729 29.630 0.00 0.00 0.00 2.69
266 267 9.270640 TCTTACATTTCATTTTTGGTGGATTTG 57.729 29.630 0.00 0.00 0.00 2.32
267 268 9.844257 TTCTTACATTTCATTTTTGGTGGATTT 57.156 25.926 0.00 0.00 0.00 2.17
268 269 9.844257 TTTCTTACATTTCATTTTTGGTGGATT 57.156 25.926 0.00 0.00 0.00 3.01
269 270 9.844257 TTTTCTTACATTTCATTTTTGGTGGAT 57.156 25.926 0.00 0.00 0.00 3.41
270 271 9.103861 GTTTTCTTACATTTCATTTTTGGTGGA 57.896 29.630 0.00 0.00 0.00 4.02
271 272 8.887717 TGTTTTCTTACATTTCATTTTTGGTGG 58.112 29.630 0.00 0.00 0.00 4.61
274 275 9.715123 GGTTGTTTTCTTACATTTCATTTTTGG 57.285 29.630 0.00 0.00 0.00 3.28
275 276 9.419737 CGGTTGTTTTCTTACATTTCATTTTTG 57.580 29.630 0.00 0.00 0.00 2.44
276 277 9.157104 ACGGTTGTTTTCTTACATTTCATTTTT 57.843 25.926 0.00 0.00 0.00 1.94
277 278 8.710835 ACGGTTGTTTTCTTACATTTCATTTT 57.289 26.923 0.00 0.00 0.00 1.82
278 279 8.194769 AGACGGTTGTTTTCTTACATTTCATTT 58.805 29.630 0.00 0.00 0.00 2.32
279 280 7.712797 AGACGGTTGTTTTCTTACATTTCATT 58.287 30.769 0.00 0.00 0.00 2.57
280 281 7.272037 AGACGGTTGTTTTCTTACATTTCAT 57.728 32.000 0.00 0.00 0.00 2.57
281 282 6.687081 AGACGGTTGTTTTCTTACATTTCA 57.313 33.333 0.00 0.00 0.00 2.69
282 283 6.356190 CGAAGACGGTTGTTTTCTTACATTTC 59.644 38.462 0.00 0.00 37.13 2.17
283 284 6.196571 CGAAGACGGTTGTTTTCTTACATTT 58.803 36.000 0.00 0.00 37.13 2.32
284 285 5.744490 CGAAGACGGTTGTTTTCTTACATT 58.256 37.500 0.00 0.00 37.13 2.71
285 286 4.319261 GCGAAGACGGTTGTTTTCTTACAT 60.319 41.667 0.00 0.00 37.13 2.29
286 287 3.001533 GCGAAGACGGTTGTTTTCTTACA 59.998 43.478 0.00 0.00 37.13 2.41
287 288 3.001533 TGCGAAGACGGTTGTTTTCTTAC 59.998 43.478 0.00 0.00 37.13 2.34
288 289 3.196463 TGCGAAGACGGTTGTTTTCTTA 58.804 40.909 0.00 0.00 37.13 2.10
289 290 2.011222 TGCGAAGACGGTTGTTTTCTT 58.989 42.857 0.00 0.00 37.13 2.52
290 291 1.658994 TGCGAAGACGGTTGTTTTCT 58.341 45.000 0.00 0.00 37.13 2.52
291 292 2.461897 TTGCGAAGACGGTTGTTTTC 57.538 45.000 0.00 0.00 40.15 2.29
292 293 4.454504 AGATATTGCGAAGACGGTTGTTTT 59.545 37.500 0.00 0.00 40.15 2.43
293 294 4.000988 AGATATTGCGAAGACGGTTGTTT 58.999 39.130 0.00 0.00 40.15 2.83
294 295 3.596214 AGATATTGCGAAGACGGTTGTT 58.404 40.909 0.00 0.00 40.15 2.83
295 296 3.187700 GAGATATTGCGAAGACGGTTGT 58.812 45.455 0.00 0.00 40.15 3.32
296 297 2.540101 GGAGATATTGCGAAGACGGTTG 59.460 50.000 0.00 0.00 40.15 3.77
297 298 2.798499 CGGAGATATTGCGAAGACGGTT 60.798 50.000 0.00 0.00 44.18 4.44
298 299 1.269102 CGGAGATATTGCGAAGACGGT 60.269 52.381 0.00 0.00 44.18 4.83
299 300 1.409412 CGGAGATATTGCGAAGACGG 58.591 55.000 0.00 0.00 44.18 4.79
306 307 1.067776 GTACCCCTCGGAGATATTGCG 60.068 57.143 6.58 0.00 42.61 4.85
307 308 1.067776 CGTACCCCTCGGAGATATTGC 60.068 57.143 6.58 0.00 33.89 3.56
308 309 2.511659 TCGTACCCCTCGGAGATATTG 58.488 52.381 6.58 0.00 33.89 1.90
309 310 2.965671 TCGTACCCCTCGGAGATATT 57.034 50.000 6.58 0.00 33.89 1.28
310 311 2.965671 TTCGTACCCCTCGGAGATAT 57.034 50.000 6.58 0.00 33.89 1.63
311 312 2.787994 GATTCGTACCCCTCGGAGATA 58.212 52.381 6.58 0.00 33.89 1.98
312 313 1.618487 GATTCGTACCCCTCGGAGAT 58.382 55.000 6.58 0.00 33.89 2.75
313 314 0.816825 CGATTCGTACCCCTCGGAGA 60.817 60.000 6.58 0.00 0.00 3.71
314 315 1.099879 ACGATTCGTACCCCTCGGAG 61.100 60.000 10.53 0.00 38.73 4.63
315 316 0.180171 TACGATTCGTACCCCTCGGA 59.820 55.000 14.63 0.00 41.54 4.55
316 317 1.242076 ATACGATTCGTACCCCTCGG 58.758 55.000 20.29 0.00 45.07 4.63
317 318 2.033801 ACAATACGATTCGTACCCCTCG 59.966 50.000 20.29 8.45 45.07 4.63
318 319 3.378339 CACAATACGATTCGTACCCCTC 58.622 50.000 20.29 0.00 45.07 4.30
319 320 2.482490 GCACAATACGATTCGTACCCCT 60.482 50.000 20.29 2.76 45.07 4.79
320 321 1.862827 GCACAATACGATTCGTACCCC 59.137 52.381 20.29 5.07 45.07 4.95
321 322 1.862827 GGCACAATACGATTCGTACCC 59.137 52.381 20.29 11.93 45.07 3.69
322 323 2.542597 TGGCACAATACGATTCGTACC 58.457 47.619 20.29 16.22 45.07 3.34
345 346 7.041303 GCATTGAGCATTTCAGAGAATCTATCA 60.041 37.037 0.00 0.00 44.60 2.15
346 347 7.299586 GCATTGAGCATTTCAGAGAATCTATC 58.700 38.462 0.00 0.00 44.60 2.08
347 348 7.204496 GCATTGAGCATTTCAGAGAATCTAT 57.796 36.000 0.00 0.00 44.60 1.98
348 349 6.615264 GCATTGAGCATTTCAGAGAATCTA 57.385 37.500 0.00 0.00 44.60 1.98
349 350 5.502153 GCATTGAGCATTTCAGAGAATCT 57.498 39.130 0.00 0.00 46.68 2.40
363 364 3.628942 TGGACTAATCATGTGCATTGAGC 59.371 43.478 8.11 0.00 45.96 4.26
364 365 4.637091 TGTGGACTAATCATGTGCATTGAG 59.363 41.667 8.11 0.00 38.01 3.02
365 366 4.587891 TGTGGACTAATCATGTGCATTGA 58.412 39.130 4.96 4.96 38.01 2.57
366 367 4.968812 TGTGGACTAATCATGTGCATTG 57.031 40.909 0.00 0.00 38.01 2.82
367 368 5.981088 TTTGTGGACTAATCATGTGCATT 57.019 34.783 0.00 0.00 38.01 3.56
368 369 5.477984 ACTTTTGTGGACTAATCATGTGCAT 59.522 36.000 0.00 0.00 38.01 3.96
369 370 4.826733 ACTTTTGTGGACTAATCATGTGCA 59.173 37.500 0.00 0.00 33.53 4.57
370 371 5.376854 ACTTTTGTGGACTAATCATGTGC 57.623 39.130 0.00 0.00 0.00 4.57
371 372 8.514594 ACAATACTTTTGTGGACTAATCATGTG 58.485 33.333 0.00 0.00 0.00 3.21
372 373 8.635765 ACAATACTTTTGTGGACTAATCATGT 57.364 30.769 0.00 0.00 0.00 3.21
373 374 8.729756 TGACAATACTTTTGTGGACTAATCATG 58.270 33.333 0.00 0.00 31.96 3.07
374 375 8.862325 TGACAATACTTTTGTGGACTAATCAT 57.138 30.769 0.00 0.00 31.96 2.45
375 376 8.862325 ATGACAATACTTTTGTGGACTAATCA 57.138 30.769 0.00 0.00 31.96 2.57
376 377 8.946085 TGATGACAATACTTTTGTGGACTAATC 58.054 33.333 0.00 0.00 31.96 1.75
377 378 8.862325 TGATGACAATACTTTTGTGGACTAAT 57.138 30.769 0.00 0.00 31.96 1.73
378 379 8.684386 TTGATGACAATACTTTTGTGGACTAA 57.316 30.769 0.00 0.00 31.96 2.24
379 380 8.862325 ATTGATGACAATACTTTTGTGGACTA 57.138 30.769 0.00 0.00 43.77 2.59
380 381 7.448161 TGATTGATGACAATACTTTTGTGGACT 59.552 33.333 0.00 0.00 45.30 3.85
381 382 7.538678 GTGATTGATGACAATACTTTTGTGGAC 59.461 37.037 0.00 0.00 45.30 4.02
382 383 7.309133 GGTGATTGATGACAATACTTTTGTGGA 60.309 37.037 0.00 0.00 45.30 4.02
383 384 6.808212 GGTGATTGATGACAATACTTTTGTGG 59.192 38.462 0.00 0.00 45.30 4.17
384 385 7.369607 TGGTGATTGATGACAATACTTTTGTG 58.630 34.615 0.00 0.00 45.30 3.33
385 386 7.523293 TGGTGATTGATGACAATACTTTTGT 57.477 32.000 0.00 0.00 45.30 2.83
386 387 8.815141 TTTGGTGATTGATGACAATACTTTTG 57.185 30.769 0.00 0.00 45.30 2.44
387 388 9.260002 GTTTTGGTGATTGATGACAATACTTTT 57.740 29.630 0.00 0.00 45.30 2.27
388 389 7.872483 GGTTTTGGTGATTGATGACAATACTTT 59.128 33.333 0.00 0.00 45.30 2.66
389 390 7.015098 TGGTTTTGGTGATTGATGACAATACTT 59.985 33.333 0.00 0.00 45.30 2.24
390 391 6.493115 TGGTTTTGGTGATTGATGACAATACT 59.507 34.615 0.00 0.00 45.30 2.12
391 392 6.586082 GTGGTTTTGGTGATTGATGACAATAC 59.414 38.462 0.00 0.00 45.30 1.89
392 393 6.493115 AGTGGTTTTGGTGATTGATGACAATA 59.507 34.615 0.00 0.00 45.30 1.90
394 395 4.648762 AGTGGTTTTGGTGATTGATGACAA 59.351 37.500 0.00 0.00 40.42 3.18
395 396 4.214310 AGTGGTTTTGGTGATTGATGACA 58.786 39.130 0.00 0.00 0.00 3.58
396 397 4.853924 AGTGGTTTTGGTGATTGATGAC 57.146 40.909 0.00 0.00 0.00 3.06
397 398 5.418524 CCATAGTGGTTTTGGTGATTGATGA 59.581 40.000 0.00 0.00 31.35 2.92
398 399 5.394443 CCCATAGTGGTTTTGGTGATTGATG 60.394 44.000 0.00 0.00 35.17 3.07
399 400 4.711355 CCCATAGTGGTTTTGGTGATTGAT 59.289 41.667 0.00 0.00 35.17 2.57
400 401 4.085733 CCCATAGTGGTTTTGGTGATTGA 58.914 43.478 0.00 0.00 35.17 2.57
401 402 4.085733 TCCCATAGTGGTTTTGGTGATTG 58.914 43.478 0.00 0.00 35.17 2.67
402 403 4.044065 TCTCCCATAGTGGTTTTGGTGATT 59.956 41.667 0.00 0.00 35.17 2.57
403 404 3.591527 TCTCCCATAGTGGTTTTGGTGAT 59.408 43.478 0.00 0.00 35.17 3.06
404 405 2.983192 TCTCCCATAGTGGTTTTGGTGA 59.017 45.455 0.00 0.00 35.17 4.02
405 406 3.433306 TCTCCCATAGTGGTTTTGGTG 57.567 47.619 0.00 0.00 35.17 4.17
406 407 4.463050 TTTCTCCCATAGTGGTTTTGGT 57.537 40.909 0.00 0.00 35.17 3.67
407 408 6.461509 GCATATTTCTCCCATAGTGGTTTTGG 60.462 42.308 0.00 0.00 35.17 3.28
408 409 6.461509 GGCATATTTCTCCCATAGTGGTTTTG 60.462 42.308 0.00 0.00 35.17 2.44
409 410 5.598417 GGCATATTTCTCCCATAGTGGTTTT 59.402 40.000 0.00 0.00 35.17 2.43
410 411 5.140454 GGCATATTTCTCCCATAGTGGTTT 58.860 41.667 0.00 0.00 35.17 3.27
411 412 4.447762 GGGCATATTTCTCCCATAGTGGTT 60.448 45.833 0.00 0.00 39.82 3.67
412 413 3.074538 GGGCATATTTCTCCCATAGTGGT 59.925 47.826 0.00 0.00 39.82 4.16
413 414 3.331889 AGGGCATATTTCTCCCATAGTGG 59.668 47.826 0.00 0.00 42.52 4.00
414 415 4.647564 AGGGCATATTTCTCCCATAGTG 57.352 45.455 0.00 0.00 42.52 2.74
415 416 5.610982 TGTTAGGGCATATTTCTCCCATAGT 59.389 40.000 0.00 0.00 42.52 2.12
416 417 5.940470 GTGTTAGGGCATATTTCTCCCATAG 59.060 44.000 0.00 0.00 42.52 2.23
417 418 5.610982 AGTGTTAGGGCATATTTCTCCCATA 59.389 40.000 0.00 0.00 42.52 2.74
418 419 4.416848 AGTGTTAGGGCATATTTCTCCCAT 59.583 41.667 0.00 0.00 42.52 4.00
419 420 3.785887 AGTGTTAGGGCATATTTCTCCCA 59.214 43.478 0.00 0.00 42.52 4.37
420 421 4.439253 AGTGTTAGGGCATATTTCTCCC 57.561 45.455 0.00 0.00 40.36 4.30
421 422 6.176014 AGTAGTGTTAGGGCATATTTCTCC 57.824 41.667 0.00 0.00 0.00 3.71
422 423 9.262358 CTTAAGTAGTGTTAGGGCATATTTCTC 57.738 37.037 0.00 0.00 0.00 2.87
423 424 7.715686 GCTTAAGTAGTGTTAGGGCATATTTCT 59.284 37.037 4.02 0.00 0.00 2.52
424 425 7.307219 CGCTTAAGTAGTGTTAGGGCATATTTC 60.307 40.741 4.02 0.00 0.00 2.17
425 426 6.482308 CGCTTAAGTAGTGTTAGGGCATATTT 59.518 38.462 4.02 0.00 0.00 1.40
426 427 5.989777 CGCTTAAGTAGTGTTAGGGCATATT 59.010 40.000 4.02 0.00 0.00 1.28
427 428 5.510861 CCGCTTAAGTAGTGTTAGGGCATAT 60.511 44.000 4.02 0.00 32.26 1.78
428 429 4.202182 CCGCTTAAGTAGTGTTAGGGCATA 60.202 45.833 4.02 0.00 32.26 3.14
429 430 3.431766 CCGCTTAAGTAGTGTTAGGGCAT 60.432 47.826 4.02 0.00 32.26 4.40
430 431 2.093869 CCGCTTAAGTAGTGTTAGGGCA 60.094 50.000 4.02 0.00 32.26 5.36
431 432 2.093816 ACCGCTTAAGTAGTGTTAGGGC 60.094 50.000 4.02 0.00 32.26 5.19
432 433 3.194116 TCACCGCTTAAGTAGTGTTAGGG 59.806 47.826 19.83 5.86 32.26 3.53
433 434 4.171754 GTCACCGCTTAAGTAGTGTTAGG 58.828 47.826 19.83 8.13 32.26 2.69
434 435 4.801891 TGTCACCGCTTAAGTAGTGTTAG 58.198 43.478 19.83 2.83 32.26 2.34
435 436 4.852134 TGTCACCGCTTAAGTAGTGTTA 57.148 40.909 19.83 11.50 32.26 2.41
436 437 3.738830 TGTCACCGCTTAAGTAGTGTT 57.261 42.857 19.83 0.00 32.26 3.32
437 438 3.738830 TTGTCACCGCTTAAGTAGTGT 57.261 42.857 19.83 5.18 32.26 3.55
438 439 4.327357 CAGATTGTCACCGCTTAAGTAGTG 59.673 45.833 16.49 16.49 0.00 2.74
439 440 4.495422 CAGATTGTCACCGCTTAAGTAGT 58.505 43.478 4.02 0.00 0.00 2.73
440 441 3.865745 CCAGATTGTCACCGCTTAAGTAG 59.134 47.826 4.02 0.00 0.00 2.57
441 442 3.259876 ACCAGATTGTCACCGCTTAAGTA 59.740 43.478 4.02 0.00 0.00 2.24
442 443 2.038557 ACCAGATTGTCACCGCTTAAGT 59.961 45.455 4.02 0.00 0.00 2.24
443 444 2.673368 GACCAGATTGTCACCGCTTAAG 59.327 50.000 0.00 0.00 35.29 1.85
444 445 2.037902 TGACCAGATTGTCACCGCTTAA 59.962 45.455 0.00 0.00 40.22 1.85
445 446 1.621317 TGACCAGATTGTCACCGCTTA 59.379 47.619 0.00 0.00 40.22 3.09
446 447 0.396435 TGACCAGATTGTCACCGCTT 59.604 50.000 0.00 0.00 40.22 4.68
447 448 2.057830 TGACCAGATTGTCACCGCT 58.942 52.632 0.00 0.00 40.22 5.52
448 449 4.693532 TGACCAGATTGTCACCGC 57.306 55.556 0.00 0.00 40.22 5.68
452 453 6.170506 GTGTAAATAGGTGACCAGATTGTCA 58.829 40.000 3.63 3.93 42.75 3.58
453 454 5.585047 GGTGTAAATAGGTGACCAGATTGTC 59.415 44.000 3.63 1.51 35.77 3.18
454 455 5.013704 TGGTGTAAATAGGTGACCAGATTGT 59.986 40.000 3.63 0.00 32.81 2.71
455 456 5.354234 GTGGTGTAAATAGGTGACCAGATTG 59.646 44.000 3.63 0.00 37.37 2.67
456 457 5.497474 GTGGTGTAAATAGGTGACCAGATT 58.503 41.667 3.63 0.00 37.37 2.40
457 458 4.080526 GGTGGTGTAAATAGGTGACCAGAT 60.081 45.833 3.63 0.00 37.37 2.90
458 459 3.262405 GGTGGTGTAAATAGGTGACCAGA 59.738 47.826 3.63 0.00 37.37 3.86
459 460 3.263425 AGGTGGTGTAAATAGGTGACCAG 59.737 47.826 3.63 0.00 37.37 4.00
460 461 3.253220 AGGTGGTGTAAATAGGTGACCA 58.747 45.455 3.63 0.00 34.26 4.02
461 462 3.994931 AGGTGGTGTAAATAGGTGACC 57.005 47.619 0.00 0.00 0.00 4.02
462 463 5.672421 ACTAGGTGGTGTAAATAGGTGAC 57.328 43.478 0.00 0.00 0.00 3.67
463 464 6.296030 GGAAACTAGGTGGTGTAAATAGGTGA 60.296 42.308 0.00 0.00 0.00 4.02
464 465 5.878669 GGAAACTAGGTGGTGTAAATAGGTG 59.121 44.000 0.00 0.00 0.00 4.00
465 466 5.789054 AGGAAACTAGGTGGTGTAAATAGGT 59.211 40.000 0.00 0.00 40.61 3.08
466 467 6.309389 AGGAAACTAGGTGGTGTAAATAGG 57.691 41.667 0.00 0.00 40.61 2.57
489 490 4.935352 AGCCAAGCAAGTTGTTTTCATA 57.065 36.364 1.73 0.00 33.87 2.15
490 491 3.825143 AGCCAAGCAAGTTGTTTTCAT 57.175 38.095 1.73 0.00 33.87 2.57
491 492 3.608316 AAGCCAAGCAAGTTGTTTTCA 57.392 38.095 1.73 0.00 33.87 2.69
492 493 3.063861 CCAAAGCCAAGCAAGTTGTTTTC 59.936 43.478 1.73 0.00 33.87 2.29
503 505 5.077134 ACTTATCAAATCCAAAGCCAAGC 57.923 39.130 0.00 0.00 0.00 4.01
563 565 7.147897 ACCAGTTTAAGCCCAAGATAAATAAGC 60.148 37.037 0.00 0.00 0.00 3.09
566 568 9.181061 GTAACCAGTTTAAGCCCAAGATAAATA 57.819 33.333 0.00 0.00 0.00 1.40
596 598 2.890808 TAGCTTTACCGAGGCATGAG 57.109 50.000 0.00 0.00 0.00 2.90
602 604 4.332819 CCTTGTTCAATAGCTTTACCGAGG 59.667 45.833 0.00 0.00 0.00 4.63
603 605 4.935808 ACCTTGTTCAATAGCTTTACCGAG 59.064 41.667 0.00 0.00 0.00 4.63
606 608 7.169140 CACAAAACCTTGTTCAATAGCTTTACC 59.831 37.037 0.00 0.00 43.45 2.85
622 624 0.885196 ACACGCACACACAAAACCTT 59.115 45.000 0.00 0.00 0.00 3.50
631 633 4.866224 CCCACCCACACGCACACA 62.866 66.667 0.00 0.00 0.00 3.72
679 685 3.282831 AGTTGGCTTACGCAACAATTC 57.717 42.857 0.00 0.00 38.10 2.17
697 703 7.553334 TCAATAGCTTTACCGAGATACAAAGT 58.447 34.615 0.00 0.00 31.95 2.66
699 705 8.958119 ATTCAATAGCTTTACCGAGATACAAA 57.042 30.769 0.00 0.00 0.00 2.83
724 730 3.018973 GCACACGCAAAACCTCGA 58.981 55.556 0.00 0.00 38.36 4.04
789 796 2.933492 GCTGGCAACCATAACACGACTA 60.933 50.000 0.00 0.00 30.82 2.59
834 841 3.724295 AACTTTTGCTTACGATCGCTC 57.276 42.857 16.60 2.23 0.00 5.03
836 843 3.360758 CCAAAACTTTTGCTTACGATCGC 59.639 43.478 16.60 0.00 0.00 4.58
839 846 4.261867 GGGACCAAAACTTTTGCTTACGAT 60.262 41.667 8.53 0.00 0.00 3.73
840 847 3.067040 GGGACCAAAACTTTTGCTTACGA 59.933 43.478 8.53 0.00 0.00 3.43
841 848 3.067601 AGGGACCAAAACTTTTGCTTACG 59.932 43.478 8.53 0.00 0.00 3.18
846 853 2.863740 CGAAAGGGACCAAAACTTTTGC 59.136 45.455 8.53 0.00 34.82 3.68
847 854 2.863740 GCGAAAGGGACCAAAACTTTTG 59.136 45.455 7.21 7.21 38.20 2.44
848 855 2.159014 GGCGAAAGGGACCAAAACTTTT 60.159 45.455 0.00 0.00 34.82 2.27
849 856 1.411246 GGCGAAAGGGACCAAAACTTT 59.589 47.619 0.00 0.00 37.16 2.66
888 895 5.334182 GCGAGAAACTTGCTTTATATAGCCC 60.334 44.000 11.98 0.00 40.49 5.19
936 949 2.096248 CTAAGAGCAGAGGAGGTTCGT 58.904 52.381 0.00 0.00 0.00 3.85
939 952 2.246091 AGCTAAGAGCAGAGGAGGTT 57.754 50.000 0.64 0.00 45.56 3.50
995 1008 2.975489 ACTTCACTCCTCACCATCAACT 59.025 45.455 0.00 0.00 0.00 3.16
1001 1014 1.070758 GCTTCACTTCACTCCTCACCA 59.929 52.381 0.00 0.00 0.00 4.17
1006 1019 2.849294 GAAGGCTTCACTTCACTCCT 57.151 50.000 21.99 0.00 44.82 3.69
1018 1031 2.290960 ACCGCCAAATTAGAGAAGGCTT 60.291 45.455 0.00 0.00 43.07 4.35
1034 1047 0.104304 AGTTACCGATCATCACCGCC 59.896 55.000 0.00 0.00 0.00 6.13
1047 1060 9.517609 CTAGACATGTGAACATAGTAAGTTACC 57.482 37.037 1.15 0.00 34.26 2.85
1063 1077 6.243551 CAACGAACATAAAGCTAGACATGTG 58.756 40.000 1.15 0.00 32.15 3.21
1083 1097 5.108254 GCAAGTATTTTTCAGAACTGCAACG 60.108 40.000 0.00 0.00 0.00 4.10
1096 1110 3.158676 TGCCTTACCCGCAAGTATTTTT 58.841 40.909 0.00 0.00 32.05 1.94
1152 1166 2.656002 TCATCGGAGTTGGTAGAGAGG 58.344 52.381 0.00 0.00 0.00 3.69
1156 1170 5.201713 GATGAATCATCGGAGTTGGTAGA 57.798 43.478 7.55 0.00 31.01 2.59
1197 1215 3.778622 AGAAGTATAGTGTCACCCCCT 57.221 47.619 0.00 0.00 0.00 4.79
1239 1257 6.785466 AGGGATATAGGAAGAGAGGAACTTTC 59.215 42.308 0.00 0.00 41.55 2.62
1273 1291 1.740025 GGAGGAGAAAATTGTCGGCAG 59.260 52.381 0.00 0.00 0.00 4.85
1303 1321 2.507886 TCCGGTGGTATTGTTGGATGAT 59.492 45.455 0.00 0.00 0.00 2.45
1310 1328 1.338389 CGAACCTCCGGTGGTATTGTT 60.338 52.381 27.68 12.49 39.83 2.83
1320 1338 1.739338 ATCTGCTAGCGAACCTCCGG 61.739 60.000 10.77 0.00 0.00 5.14
1333 1351 4.414337 GAGATGAAGTTACCCATCTGCT 57.586 45.455 18.05 0.73 46.64 4.24
1334 1352 3.471680 GGAGATGAAGTTACCCATCTGC 58.528 50.000 18.05 17.06 46.64 4.26
1355 1373 0.327964 ATCAAGGAGGGAAGGGAGGG 60.328 60.000 0.00 0.00 0.00 4.30
1371 1389 7.396907 TGAGCAAATTTATTTTCTCTGGGATCA 59.603 33.333 13.39 1.66 39.63 2.92
1372 1390 7.775120 TGAGCAAATTTATTTTCTCTGGGATC 58.225 34.615 13.39 0.00 39.63 3.36
1375 1393 7.161773 TCTGAGCAAATTTATTTTCTCTGGG 57.838 36.000 15.81 8.21 39.63 4.45
1404 1422 8.655970 TGAAACTTGTTATATTGTCGACATGAG 58.344 33.333 20.80 10.46 0.00 2.90
1440 1491 6.605995 TCCGGTCATCTATCTAGACAGAAAAA 59.394 38.462 4.51 0.00 34.72 1.94
1447 1498 6.576662 TTCAATCCGGTCATCTATCTAGAC 57.423 41.667 0.00 0.00 34.72 2.59
1468 1519 6.390987 AACTTCCGAATAATATCGCGATTC 57.609 37.500 28.81 17.60 41.40 2.52
1495 1546 7.971168 CGGTCTAGAGTGCTTAAATAGGATATG 59.029 40.741 0.00 0.00 0.00 1.78
1503 1554 5.916661 TCTTCGGTCTAGAGTGCTTAAAT 57.083 39.130 0.00 0.00 0.00 1.40
1508 1559 1.474879 GCTTCTTCGGTCTAGAGTGCT 59.525 52.381 0.00 0.00 0.00 4.40
1510 1561 2.750166 TCTGCTTCTTCGGTCTAGAGTG 59.250 50.000 0.00 0.00 0.00 3.51
1527 1578 5.984695 ACTCCCCTAAAAGAAAAATCTGC 57.015 39.130 0.00 0.00 0.00 4.26
1529 1580 6.493802 GGACAACTCCCCTAAAAGAAAAATCT 59.506 38.462 0.00 0.00 0.00 2.40
1531 1582 6.140377 TGGACAACTCCCCTAAAAGAAAAAT 58.860 36.000 0.00 0.00 35.34 1.82
1546 1604 2.685100 CTCGGGTTAACTGGACAACTC 58.315 52.381 5.42 0.00 0.00 3.01
1549 1607 0.035739 GGCTCGGGTTAACTGGACAA 59.964 55.000 5.42 0.00 0.00 3.18
1585 1643 3.016031 TGACTCTCTAGAGCTGCAAGAG 58.984 50.000 15.35 16.12 45.79 2.85
1596 1654 2.796557 TCTGGTGTGGTGACTCTCTAG 58.203 52.381 0.00 0.00 0.00 2.43
1681 1739 2.753452 GCTGGAAAAGGTTAGCCCTAAC 59.247 50.000 9.20 9.20 45.47 2.34
1791 1849 2.397549 GTTCAATGTGAGCCTTGTTGC 58.602 47.619 0.00 0.00 0.00 4.17
2131 2189 4.759205 ACATGGAAAGCCCGGCCC 62.759 66.667 5.55 0.34 37.93 5.80
2132 2190 3.451894 CACATGGAAAGCCCGGCC 61.452 66.667 5.55 0.00 37.93 6.13
2212 2271 2.978824 GGCTACGAGACAAGGCCA 59.021 61.111 5.01 0.00 42.08 5.36
2334 2393 3.572539 CTCTCTCGCTCGCTCGCT 61.573 66.667 0.00 0.00 0.00 4.93
2335 2394 3.506312 CTCTCTCTCGCTCGCTCGC 62.506 68.421 0.00 0.00 0.00 5.03
2336 2395 1.821241 CTCTCTCTCTCGCTCGCTCG 61.821 65.000 0.00 0.00 0.00 5.03
2337 2396 0.529773 TCTCTCTCTCTCGCTCGCTC 60.530 60.000 0.00 0.00 0.00 5.03
2384 2443 1.384989 CCACCACTACCTCGCTCGAT 61.385 60.000 0.00 0.00 0.00 3.59
2423 2700 2.135139 GAATATCGCCATCTCACGCAA 58.865 47.619 0.00 0.00 0.00 4.85
2452 2729 1.375268 GTGGAAGAAGCTGCGCTCT 60.375 57.895 9.73 2.40 38.25 4.09
2671 2948 2.935481 TTGGTGCAGGGGAGGAGG 60.935 66.667 0.00 0.00 0.00 4.30
2819 3096 1.005394 TGGGAAAGAAGACGGCGTC 60.005 57.895 31.33 31.33 0.00 5.19
3074 3595 2.427245 CCTCTGGAAGGCGGTCGAT 61.427 63.158 0.00 0.00 38.67 3.59
3157 3678 4.264145 CGATGAGCTTACGAGTTGAAGAAG 59.736 45.833 0.00 0.00 0.00 2.85
3485 4023 2.242043 CATTCAGGCTTGGAAGGTGTT 58.758 47.619 0.00 0.00 0.00 3.32
3514 4060 0.178998 AGCTGGATGCATGGATGGAC 60.179 55.000 2.46 0.00 45.94 4.02
3628 4179 2.619177 CTGGACCAATCGATCGAGTAGT 59.381 50.000 23.84 19.92 0.00 2.73
3741 4293 6.799925 CGGAAGTAAACACACATTTATTCCAC 59.200 38.462 0.00 0.00 34.92 4.02
3805 4364 0.322546 CCCTGGTGGACCTAACAAGC 60.323 60.000 0.00 0.00 35.39 4.01
3844 4912 6.346359 GCTGATCAAACAAAAGAAGCATTGAC 60.346 38.462 0.00 0.00 30.46 3.18
3905 4973 4.380843 TCTGGCAGGAACAGGAAATAAA 57.619 40.909 15.73 0.00 36.62 1.40
4102 5170 6.831727 TGTTTGATTGCATCACAAGAAAAG 57.168 33.333 0.00 0.00 42.87 2.27
4177 5245 7.482157 TCCTATTCTCATGATATCCAGAGGAA 58.518 38.462 16.86 11.93 34.34 3.36
4182 5250 9.955102 TGATTTTCCTATTCTCATGATATCCAG 57.045 33.333 0.00 0.00 0.00 3.86
4238 5321 5.127682 TCGAATGACATCTCTTTCTCCATGA 59.872 40.000 0.00 0.00 31.31 3.07
4239 5322 5.354767 TCGAATGACATCTCTTTCTCCATG 58.645 41.667 0.00 0.00 31.31 3.66
4355 5439 8.113462 AGCCCTTTACTTTGTAGAAATGGATTA 58.887 33.333 0.00 0.00 0.00 1.75
4364 5448 3.167485 TCGGAGCCCTTTACTTTGTAGA 58.833 45.455 0.00 0.00 0.00 2.59
4450 5534 3.118531 AGGAAGAATACATGACCAGGCT 58.881 45.455 0.00 0.00 0.00 4.58
4455 5539 5.221661 ACCGGAATAGGAAGAATACATGACC 60.222 44.000 9.46 0.00 34.73 4.02
4456 5540 5.696724 CACCGGAATAGGAAGAATACATGAC 59.303 44.000 9.46 0.00 34.73 3.06
4466 5550 6.563222 TTGTAAAAACACCGGAATAGGAAG 57.437 37.500 9.46 0.00 34.73 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.