Multiple sequence alignment - TraesCS1A01G218400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G218400 chr1A 100.000 6643 0 0 1 6643 387021934 387028576 0.000000e+00 12268.0
1 TraesCS1A01G218400 chr1B 95.614 2280 81 14 1582 3853 416816966 416819234 0.000000e+00 3639.0
2 TraesCS1A01G218400 chr1B 95.161 930 37 6 3715 4642 416819234 416820157 0.000000e+00 1461.0
3 TraesCS1A01G218400 chr1B 95.685 788 30 3 4970 5757 416820315 416821098 0.000000e+00 1264.0
4 TraesCS1A01G218400 chr1B 92.033 615 35 7 5786 6398 416821084 416821686 0.000000e+00 852.0
5 TraesCS1A01G218400 chr1B 93.837 503 17 3 828 1330 416815939 416816427 0.000000e+00 745.0
6 TraesCS1A01G218400 chr1B 95.402 174 8 0 1411 1584 416816714 416816887 1.820000e-70 278.0
7 TraesCS1A01G218400 chr1B 95.146 103 5 0 6540 6642 416821823 416821925 5.330000e-36 163.0
8 TraesCS1A01G218400 chr1B 88.889 108 5 4 6438 6539 416821687 416821793 6.990000e-25 126.0
9 TraesCS1A01G218400 chr1B 93.846 65 2 1 4643 4707 416820185 416820247 5.480000e-16 97.1
10 TraesCS1A01G218400 chr1B 82.667 75 2 3 4727 4801 308909269 308909206 1.000000e-03 56.5
11 TraesCS1A01G218400 chr1D 94.702 2246 92 18 1411 3640 307827020 307829254 0.000000e+00 3463.0
12 TraesCS1A01G218400 chr1D 91.810 1050 62 13 5452 6485 307830946 307831987 0.000000e+00 1441.0
13 TraesCS1A01G218400 chr1D 91.753 873 47 16 3726 4592 307829253 307830106 0.000000e+00 1190.0
14 TraesCS1A01G218400 chr1D 91.774 620 43 6 4804 5419 307830329 307830944 0.000000e+00 856.0
15 TraesCS1A01G218400 chr1D 90.748 508 21 12 828 1318 307826440 307826938 0.000000e+00 654.0
16 TraesCS1A01G218400 chr1D 96.117 103 4 0 6540 6642 307832060 307832162 1.150000e-37 169.0
17 TraesCS1A01G218400 chr1D 90.816 98 9 0 4704 4801 216018531 216018434 1.500000e-26 132.0
18 TraesCS1A01G218400 chr1D 97.143 35 1 0 6502 6536 307831989 307832023 7.190000e-05 60.2
19 TraesCS1A01G218400 chr4D 96.935 620 19 0 1 620 88085699 88086318 0.000000e+00 1040.0
20 TraesCS1A01G218400 chr4D 96.935 620 19 0 1 620 481898072 481898691 0.000000e+00 1040.0
21 TraesCS1A01G218400 chr4D 80.915 896 147 18 2582 3467 226561949 226562830 0.000000e+00 686.0
22 TraesCS1A01G218400 chr4D 81.333 300 56 0 4159 4458 226563528 226563827 1.850000e-60 244.0
23 TraesCS1A01G218400 chr4D 91.667 84 7 0 1013 1096 226455642 226455725 4.210000e-22 117.0
24 TraesCS1A01G218400 chr4D 90.805 87 8 0 1010 1096 226558478 226558564 4.210000e-22 117.0
25 TraesCS1A01G218400 chr4D 89.655 87 9 0 1010 1096 226385547 226385633 1.960000e-20 111.0
26 TraesCS1A01G218400 chr7D 96.774 620 20 0 1 620 626895073 626895692 0.000000e+00 1035.0
27 TraesCS1A01G218400 chr7D 96.769 619 20 0 1 619 602729806 602730424 0.000000e+00 1033.0
28 TraesCS1A01G218400 chr7D 96.970 33 1 0 6429 6461 378322262 378322294 1.000000e-03 56.5
29 TraesCS1A01G218400 chr5A 96.774 620 20 0 1 620 707998972 707998353 0.000000e+00 1035.0
30 TraesCS1A01G218400 chr3D 96.774 620 20 0 1 620 575934693 575934074 0.000000e+00 1035.0
31 TraesCS1A01G218400 chr2A 96.921 617 19 0 4 620 619610860 619610244 0.000000e+00 1035.0
32 TraesCS1A01G218400 chr6D 96.769 619 19 1 2 620 62216046 62216663 0.000000e+00 1031.0
33 TraesCS1A01G218400 chr3A 96.624 622 17 1 3 624 478677017 478677634 0.000000e+00 1029.0
34 TraesCS1A01G218400 chr2B 81.639 915 141 20 2571 3473 783444505 783445404 0.000000e+00 734.0
35 TraesCS1A01G218400 chr2B 74.910 554 99 30 1454 1991 783443250 783443779 4.030000e-52 217.0
36 TraesCS1A01G218400 chr2B 91.011 89 8 0 1008 1096 783441890 783441978 3.250000e-23 121.0
37 TraesCS1A01G218400 chr2D 81.689 912 137 23 2571 3469 648283769 648284663 0.000000e+00 732.0
38 TraesCS1A01G218400 chr2D 74.910 554 100 31 1454 1991 648282267 648282797 4.030000e-52 217.0
39 TraesCS1A01G218400 chr2D 91.011 89 8 0 1008 1096 648281386 648281474 3.250000e-23 121.0
40 TraesCS1A01G218400 chrUn 81.347 906 136 24 2574 3464 31114336 31113449 0.000000e+00 706.0
41 TraesCS1A01G218400 chrUn 91.011 89 8 0 1008 1096 31116585 31116497 3.250000e-23 121.0
42 TraesCS1A01G218400 chr4B 80.804 896 148 18 2582 3467 311371744 311370863 0.000000e+00 680.0
43 TraesCS1A01G218400 chr4B 82.333 300 53 0 4159 4458 311370116 311369817 1.840000e-65 261.0
44 TraesCS1A01G218400 chr4A 80.290 898 149 21 2582 3467 232511095 232511976 0.000000e+00 652.0
45 TraesCS1A01G218400 chr4A 82.000 300 54 0 4159 4458 232512671 232512970 8.550000e-64 255.0
46 TraesCS1A01G218400 chr4A 91.954 87 7 0 1010 1096 232506675 232506761 9.050000e-24 122.0
47 TraesCS1A01G218400 chr6A 86.907 443 41 7 4200 4640 37835601 37836028 1.300000e-131 481.0
48 TraesCS1A01G218400 chr7B 96.970 33 1 0 6429 6461 373075547 373075579 1.000000e-03 56.5
49 TraesCS1A01G218400 chr7A 96.970 33 1 0 6429 6461 426576361 426576393 1.000000e-03 56.5
50 TraesCS1A01G218400 chr6B 100.000 28 0 0 6434 6461 710316916 710316889 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G218400 chr1A 387021934 387028576 6642 False 12268.000000 12268 100.000000 1 6643 1 chr1A.!!$F1 6642
1 TraesCS1A01G218400 chr1B 416815939 416821925 5986 False 958.344444 3639 93.957000 828 6642 9 chr1B.!!$F1 5814
2 TraesCS1A01G218400 chr1D 307826440 307832162 5722 False 1119.028571 3463 93.435286 828 6642 7 chr1D.!!$F1 5814
3 TraesCS1A01G218400 chr4D 88085699 88086318 619 False 1040.000000 1040 96.935000 1 620 1 chr4D.!!$F1 619
4 TraesCS1A01G218400 chr4D 481898072 481898691 619 False 1040.000000 1040 96.935000 1 620 1 chr4D.!!$F4 619
5 TraesCS1A01G218400 chr4D 226558478 226563827 5349 False 349.000000 686 84.351000 1010 4458 3 chr4D.!!$F5 3448
6 TraesCS1A01G218400 chr7D 626895073 626895692 619 False 1035.000000 1035 96.774000 1 620 1 chr7D.!!$F3 619
7 TraesCS1A01G218400 chr7D 602729806 602730424 618 False 1033.000000 1033 96.769000 1 619 1 chr7D.!!$F2 618
8 TraesCS1A01G218400 chr5A 707998353 707998972 619 True 1035.000000 1035 96.774000 1 620 1 chr5A.!!$R1 619
9 TraesCS1A01G218400 chr3D 575934074 575934693 619 True 1035.000000 1035 96.774000 1 620 1 chr3D.!!$R1 619
10 TraesCS1A01G218400 chr2A 619610244 619610860 616 True 1035.000000 1035 96.921000 4 620 1 chr2A.!!$R1 616
11 TraesCS1A01G218400 chr6D 62216046 62216663 617 False 1031.000000 1031 96.769000 2 620 1 chr6D.!!$F1 618
12 TraesCS1A01G218400 chr3A 478677017 478677634 617 False 1029.000000 1029 96.624000 3 624 1 chr3A.!!$F1 621
13 TraesCS1A01G218400 chr2B 783441890 783445404 3514 False 357.333333 734 82.520000 1008 3473 3 chr2B.!!$F1 2465
14 TraesCS1A01G218400 chr2D 648281386 648284663 3277 False 356.666667 732 82.536667 1008 3469 3 chr2D.!!$F1 2461
15 TraesCS1A01G218400 chrUn 31113449 31116585 3136 True 413.500000 706 86.179000 1008 3464 2 chrUn.!!$R1 2456
16 TraesCS1A01G218400 chr4B 311369817 311371744 1927 True 470.500000 680 81.568500 2582 4458 2 chr4B.!!$R1 1876
17 TraesCS1A01G218400 chr4A 232511095 232512970 1875 False 453.500000 652 81.145000 2582 4458 2 chr4A.!!$F2 1876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 755 0.313987 AGTTCGTGCGTCACTGATCA 59.686 50.0 0.00 0.00 31.34 2.92 F
755 756 0.435008 GTTCGTGCGTCACTGATCAC 59.565 55.0 0.00 4.98 31.34 3.06 F
788 789 0.453793 TTGTGCTTGTTTCACCCGTG 59.546 50.0 0.00 0.00 33.71 4.94 F
1336 2253 0.603065 CGTCGGGGCATCTCATATGA 59.397 55.0 5.07 5.07 0.00 2.15 F
1456 2869 0.790207 CGTCGTGAGATGGTGGTTTG 59.210 55.0 0.00 0.00 45.19 2.93 F
2023 4872 1.078709 CATGTGTTGCTACCACCTCG 58.921 55.0 0.00 0.00 31.71 4.63 F
3107 6817 2.177394 TACGCTGCCATTTTCAGTCA 57.823 45.0 0.00 0.00 34.21 3.41 F
4719 8839 2.704190 ATGTACTCCCTCCGATCCAT 57.296 50.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1657 3201 1.895131 GGGCATTTCTGAAGCAAGGAA 59.105 47.619 4.35 0.0 0.00 3.36 R
1793 4631 2.159462 GGCAGCTTCAAGCATAACAGAC 60.159 50.000 13.10 0.0 45.56 3.51 R
2747 6452 2.236223 ATCTCTGCAGCTCACCACCG 62.236 60.000 9.47 0.0 0.00 4.94 R
3270 6984 1.379044 AGCATTTTCCTGGGCCTCG 60.379 57.895 4.53 0.0 0.00 4.63 R
3474 7194 2.517553 AGAGATCAGAGATGGGAGGTGA 59.482 50.000 0.00 0.0 0.00 4.02 R
3514 7234 3.571828 TCCAAGACTCTCAGTGACTTGAG 59.428 47.826 17.13 12.7 44.74 3.02 R
4881 9001 0.184451 AGCAGGGGGAAGCACATATG 59.816 55.000 0.00 0.0 0.00 1.78 R
5793 9959 0.036306 GACGTCCCCCATGTTGTCTT 59.964 55.000 3.51 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 2.661176 AAGGGAAGATGGTGGTCCTA 57.339 50.000 0.00 0.00 34.23 2.94
177 178 4.436998 CAGGTGCGACGGGAGGAC 62.437 72.222 0.00 0.00 0.00 3.85
186 187 1.605451 ACGGGAGGACGTGTGATCA 60.605 57.895 0.00 0.00 46.64 2.92
330 331 3.995636 AGCCTACCTATTCTGGTTGAGA 58.004 45.455 0.00 0.00 41.22 3.27
390 391 5.417811 GCGAGATGGATAGATCATCACATT 58.582 41.667 0.00 0.00 42.38 2.71
644 645 7.907214 TGTTCTAAACTCTGAATAAAGGAGC 57.093 36.000 0.00 0.00 0.00 4.70
645 646 7.450074 TGTTCTAAACTCTGAATAAAGGAGCA 58.550 34.615 0.00 0.00 0.00 4.26
646 647 7.604164 TGTTCTAAACTCTGAATAAAGGAGCAG 59.396 37.037 0.00 0.00 0.00 4.24
647 648 7.246171 TCTAAACTCTGAATAAAGGAGCAGT 57.754 36.000 0.00 0.00 0.00 4.40
648 649 7.680730 TCTAAACTCTGAATAAAGGAGCAGTT 58.319 34.615 0.00 0.00 0.00 3.16
649 650 8.812972 TCTAAACTCTGAATAAAGGAGCAGTTA 58.187 33.333 0.00 0.00 0.00 2.24
650 651 9.606631 CTAAACTCTGAATAAAGGAGCAGTTAT 57.393 33.333 0.00 0.00 0.00 1.89
651 652 8.499403 AAACTCTGAATAAAGGAGCAGTTATC 57.501 34.615 0.00 0.00 0.00 1.75
652 653 7.430760 ACTCTGAATAAAGGAGCAGTTATCT 57.569 36.000 0.00 0.00 0.00 1.98
653 654 8.540507 ACTCTGAATAAAGGAGCAGTTATCTA 57.459 34.615 0.00 0.00 0.00 1.98
654 655 8.982723 ACTCTGAATAAAGGAGCAGTTATCTAA 58.017 33.333 0.00 0.00 0.00 2.10
655 656 9.823647 CTCTGAATAAAGGAGCAGTTATCTAAA 57.176 33.333 0.00 0.00 0.00 1.85
716 717 3.542969 AAATTATGGGGTAGGATGGCC 57.457 47.619 0.00 0.00 0.00 5.36
717 718 0.991920 ATTATGGGGTAGGATGGCCG 59.008 55.000 0.00 0.00 39.96 6.13
718 719 1.131303 TTATGGGGTAGGATGGCCGG 61.131 60.000 0.00 0.00 39.96 6.13
719 720 2.038545 TATGGGGTAGGATGGCCGGA 62.039 60.000 5.05 0.00 39.96 5.14
720 721 3.242291 GGGGTAGGATGGCCGGAG 61.242 72.222 5.05 0.00 39.96 4.63
721 722 2.446036 GGGTAGGATGGCCGGAGT 60.446 66.667 5.05 0.00 39.96 3.85
722 723 1.152398 GGGTAGGATGGCCGGAGTA 60.152 63.158 5.05 0.00 39.96 2.59
723 724 1.186267 GGGTAGGATGGCCGGAGTAG 61.186 65.000 5.05 0.00 39.96 2.57
724 725 1.666580 GTAGGATGGCCGGAGTAGC 59.333 63.158 5.05 0.00 39.96 3.58
734 735 2.187163 GGAGTAGCCGCCTTGACC 59.813 66.667 0.00 0.00 0.00 4.02
735 736 2.656069 GGAGTAGCCGCCTTGACCA 61.656 63.158 0.00 0.00 0.00 4.02
736 737 1.153549 GAGTAGCCGCCTTGACCAG 60.154 63.158 0.00 0.00 0.00 4.00
737 738 1.889530 GAGTAGCCGCCTTGACCAGT 61.890 60.000 0.00 0.00 0.00 4.00
738 739 1.003718 GTAGCCGCCTTGACCAGTT 60.004 57.895 0.00 0.00 0.00 3.16
739 740 1.019805 GTAGCCGCCTTGACCAGTTC 61.020 60.000 0.00 0.00 0.00 3.01
740 741 2.501223 TAGCCGCCTTGACCAGTTCG 62.501 60.000 0.00 0.00 0.00 3.95
741 742 2.030562 CCGCCTTGACCAGTTCGT 59.969 61.111 0.00 0.00 0.00 3.85
742 743 2.317609 CCGCCTTGACCAGTTCGTG 61.318 63.158 0.00 0.00 0.00 4.35
743 744 2.946762 GCCTTGACCAGTTCGTGC 59.053 61.111 0.00 0.00 0.00 5.34
744 745 2.954753 GCCTTGACCAGTTCGTGCG 61.955 63.158 0.00 0.00 0.00 5.34
745 746 1.594293 CCTTGACCAGTTCGTGCGT 60.594 57.895 0.00 0.00 0.00 5.24
746 747 1.557443 CCTTGACCAGTTCGTGCGTC 61.557 60.000 0.00 0.00 0.00 5.19
747 748 0.874175 CTTGACCAGTTCGTGCGTCA 60.874 55.000 0.00 0.00 35.67 4.35
748 749 1.149361 TTGACCAGTTCGTGCGTCAC 61.149 55.000 0.00 0.58 36.60 3.67
749 750 1.299926 GACCAGTTCGTGCGTCACT 60.300 57.895 8.07 0.00 31.34 3.41
750 751 1.548973 GACCAGTTCGTGCGTCACTG 61.549 60.000 14.91 14.91 38.14 3.66
751 752 1.299850 CCAGTTCGTGCGTCACTGA 60.300 57.895 20.06 5.00 40.43 3.41
752 753 0.667487 CCAGTTCGTGCGTCACTGAT 60.667 55.000 20.06 0.00 40.43 2.90
753 754 0.710567 CAGTTCGTGCGTCACTGATC 59.289 55.000 16.08 0.00 40.43 2.92
754 755 0.313987 AGTTCGTGCGTCACTGATCA 59.686 50.000 0.00 0.00 31.34 2.92
755 756 0.435008 GTTCGTGCGTCACTGATCAC 59.565 55.000 0.00 4.98 31.34 3.06
756 757 3.064178 CGTGCGTCACTGATCACG 58.936 61.111 16.90 16.90 44.62 4.35
757 758 1.729484 CGTGCGTCACTGATCACGT 60.729 57.895 20.00 0.00 44.84 4.49
758 759 1.775344 GTGCGTCACTGATCACGTG 59.225 57.895 9.94 9.94 38.32 4.49
759 760 0.939577 GTGCGTCACTGATCACGTGT 60.940 55.000 16.51 2.57 38.32 4.49
760 761 0.939106 TGCGTCACTGATCACGTGTG 60.939 55.000 16.51 13.66 38.32 3.82
761 762 0.939577 GCGTCACTGATCACGTGTGT 60.940 55.000 16.51 5.63 38.32 3.72
762 763 1.664874 GCGTCACTGATCACGTGTGTA 60.665 52.381 16.51 0.00 38.32 2.90
763 764 2.657184 CGTCACTGATCACGTGTGTAA 58.343 47.619 16.51 0.00 34.14 2.41
764 765 3.047093 CGTCACTGATCACGTGTGTAAA 58.953 45.455 16.51 0.00 34.14 2.01
765 766 3.121463 CGTCACTGATCACGTGTGTAAAC 60.121 47.826 16.51 10.47 34.14 2.01
766 767 3.183775 GTCACTGATCACGTGTGTAAACC 59.816 47.826 16.51 0.00 34.14 3.27
767 768 3.069016 TCACTGATCACGTGTGTAAACCT 59.931 43.478 16.51 0.00 34.14 3.50
768 769 3.428870 CACTGATCACGTGTGTAAACCTC 59.571 47.826 16.51 2.05 0.00 3.85
769 770 3.321111 ACTGATCACGTGTGTAAACCTCT 59.679 43.478 16.51 0.00 0.00 3.69
770 771 4.202223 ACTGATCACGTGTGTAAACCTCTT 60.202 41.667 16.51 0.00 0.00 2.85
771 772 4.055360 TGATCACGTGTGTAAACCTCTTG 58.945 43.478 16.51 0.00 0.00 3.02
772 773 3.530265 TCACGTGTGTAAACCTCTTGT 57.470 42.857 16.51 0.00 0.00 3.16
773 774 3.191669 TCACGTGTGTAAACCTCTTGTG 58.808 45.455 16.51 0.00 0.00 3.33
774 775 1.937899 ACGTGTGTAAACCTCTTGTGC 59.062 47.619 0.00 0.00 0.00 4.57
775 776 2.210116 CGTGTGTAAACCTCTTGTGCT 58.790 47.619 0.00 0.00 0.00 4.40
776 777 2.612212 CGTGTGTAAACCTCTTGTGCTT 59.388 45.455 0.00 0.00 0.00 3.91
777 778 3.546020 CGTGTGTAAACCTCTTGTGCTTG 60.546 47.826 0.00 0.00 0.00 4.01
778 779 3.377172 GTGTGTAAACCTCTTGTGCTTGT 59.623 43.478 0.00 0.00 0.00 3.16
779 780 4.013728 TGTGTAAACCTCTTGTGCTTGTT 58.986 39.130 0.00 0.00 0.00 2.83
780 781 4.461081 TGTGTAAACCTCTTGTGCTTGTTT 59.539 37.500 0.00 0.00 33.96 2.83
781 782 5.034797 GTGTAAACCTCTTGTGCTTGTTTC 58.965 41.667 0.00 0.00 32.02 2.78
782 783 4.702612 TGTAAACCTCTTGTGCTTGTTTCA 59.297 37.500 0.00 0.00 32.02 2.69
783 784 3.782889 AACCTCTTGTGCTTGTTTCAC 57.217 42.857 0.00 0.00 35.14 3.18
784 785 2.024414 ACCTCTTGTGCTTGTTTCACC 58.976 47.619 0.00 0.00 33.71 4.02
785 786 1.338020 CCTCTTGTGCTTGTTTCACCC 59.662 52.381 0.00 0.00 33.71 4.61
786 787 1.002468 CTCTTGTGCTTGTTTCACCCG 60.002 52.381 0.00 0.00 33.71 5.28
787 788 0.738389 CTTGTGCTTGTTTCACCCGT 59.262 50.000 0.00 0.00 33.71 5.28
788 789 0.453793 TTGTGCTTGTTTCACCCGTG 59.546 50.000 0.00 0.00 33.71 4.94
789 790 0.678366 TGTGCTTGTTTCACCCGTGT 60.678 50.000 0.00 0.00 33.71 4.49
790 791 1.301423 GTGCTTGTTTCACCCGTGTA 58.699 50.000 0.00 0.00 0.00 2.90
791 792 1.671845 GTGCTTGTTTCACCCGTGTAA 59.328 47.619 0.00 0.00 0.00 2.41
792 793 2.097791 GTGCTTGTTTCACCCGTGTAAA 59.902 45.455 0.00 0.00 0.00 2.01
793 794 2.753452 TGCTTGTTTCACCCGTGTAAAA 59.247 40.909 0.00 0.00 0.00 1.52
794 795 3.381908 TGCTTGTTTCACCCGTGTAAAAT 59.618 39.130 0.00 0.00 0.00 1.82
795 796 4.579340 TGCTTGTTTCACCCGTGTAAAATA 59.421 37.500 0.00 0.00 0.00 1.40
796 797 5.067413 TGCTTGTTTCACCCGTGTAAAATAA 59.933 36.000 0.00 0.00 0.00 1.40
797 798 5.978322 GCTTGTTTCACCCGTGTAAAATAAA 59.022 36.000 0.00 0.00 0.00 1.40
798 799 6.143278 GCTTGTTTCACCCGTGTAAAATAAAG 59.857 38.462 0.00 0.83 0.00 1.85
799 800 6.074544 TGTTTCACCCGTGTAAAATAAAGG 57.925 37.500 0.00 0.00 0.00 3.11
800 801 5.826737 TGTTTCACCCGTGTAAAATAAAGGA 59.173 36.000 0.00 0.00 0.00 3.36
801 802 6.016943 TGTTTCACCCGTGTAAAATAAAGGAG 60.017 38.462 0.00 0.00 0.00 3.69
802 803 4.581868 TCACCCGTGTAAAATAAAGGAGG 58.418 43.478 0.00 0.00 0.00 4.30
803 804 4.286549 TCACCCGTGTAAAATAAAGGAGGA 59.713 41.667 0.00 0.00 0.00 3.71
804 805 4.634443 CACCCGTGTAAAATAAAGGAGGAG 59.366 45.833 0.00 0.00 0.00 3.69
805 806 4.533311 ACCCGTGTAAAATAAAGGAGGAGA 59.467 41.667 0.00 0.00 0.00 3.71
806 807 5.116882 CCCGTGTAAAATAAAGGAGGAGAG 58.883 45.833 0.00 0.00 0.00 3.20
807 808 4.571176 CCGTGTAAAATAAAGGAGGAGAGC 59.429 45.833 0.00 0.00 0.00 4.09
808 809 4.571176 CGTGTAAAATAAAGGAGGAGAGCC 59.429 45.833 0.00 0.00 0.00 4.70
809 810 4.882427 GTGTAAAATAAAGGAGGAGAGCCC 59.118 45.833 0.00 0.00 33.31 5.19
876 878 2.063266 TGATCACGCGTGTAAAACTCC 58.937 47.619 35.74 17.60 0.00 3.85
883 885 1.194772 GCGTGTAAAACTCCTGTGCTC 59.805 52.381 0.00 0.00 0.00 4.26
901 903 2.352814 GCTCGTTTCAGAAGCTGGTCTA 60.353 50.000 0.00 0.00 31.51 2.59
1203 1376 4.070552 GCTCCTTCCCGTGCTCGT 62.071 66.667 7.47 0.00 35.01 4.18
1204 1377 2.657237 CTCCTTCCCGTGCTCGTT 59.343 61.111 7.47 0.00 35.01 3.85
1205 1378 1.738099 CTCCTTCCCGTGCTCGTTG 60.738 63.158 7.47 0.00 35.01 4.10
1206 1379 2.742372 CCTTCCCGTGCTCGTTGG 60.742 66.667 7.47 2.34 35.01 3.77
1207 1380 3.423154 CTTCCCGTGCTCGTTGGC 61.423 66.667 7.47 0.00 35.01 4.52
1332 2249 4.241555 GGCGTCGGGGCATCTCAT 62.242 66.667 0.00 0.00 41.77 2.90
1333 2250 2.734591 GCGTCGGGGCATCTCATA 59.265 61.111 0.00 0.00 0.00 2.15
1335 2252 1.016130 GCGTCGGGGCATCTCATATG 61.016 60.000 0.00 0.00 0.00 1.78
1336 2253 0.603065 CGTCGGGGCATCTCATATGA 59.397 55.000 5.07 5.07 0.00 2.15
1340 2290 1.023513 GGGGCATCTCATATGAGCGC 61.024 60.000 26.55 26.55 41.80 5.92
1373 2328 6.640499 TGCTGCATATTAAGTTGTTTTGACAC 59.360 34.615 0.00 0.00 0.00 3.67
1387 2342 7.229228 TGTTTTGACACGATTATATTCTCCG 57.771 36.000 0.00 0.00 0.00 4.63
1388 2343 6.814644 TGTTTTGACACGATTATATTCTCCGT 59.185 34.615 0.00 0.00 0.00 4.69
1399 2354 8.861101 CGATTATATTCTCCGTGAAGTAAATCC 58.139 37.037 0.00 0.00 38.18 3.01
1401 2356 8.882415 TTATATTCTCCGTGAAGTAAATCCAC 57.118 34.615 0.00 0.00 38.18 4.02
1402 2357 3.604875 TCTCCGTGAAGTAAATCCACC 57.395 47.619 0.00 0.00 0.00 4.61
1404 2359 4.346730 TCTCCGTGAAGTAAATCCACCTA 58.653 43.478 0.00 0.00 0.00 3.08
1409 2364 5.753921 CCGTGAAGTAAATCCACCTATCTTC 59.246 44.000 0.00 0.00 0.00 2.87
1456 2869 0.790207 CGTCGTGAGATGGTGGTTTG 59.210 55.000 0.00 0.00 45.19 2.93
1457 2870 1.872237 CGTCGTGAGATGGTGGTTTGT 60.872 52.381 0.00 0.00 45.19 2.83
1459 2872 3.395639 GTCGTGAGATGGTGGTTTGTTA 58.604 45.455 0.00 0.00 45.19 2.41
1500 2917 1.183676 AGTTACTCCGGCGTCCAAGT 61.184 55.000 0.00 6.44 0.00 3.16
1603 3142 6.067263 TGTAGCTGTTAAAATGTGTGGTTC 57.933 37.500 0.00 0.00 0.00 3.62
1622 3161 5.486063 TGGTTCCCTATGTGTATGTACTGTT 59.514 40.000 0.00 0.00 0.00 3.16
1623 3162 5.815740 GGTTCCCTATGTGTATGTACTGTTG 59.184 44.000 0.00 0.00 0.00 3.33
1625 3164 7.272978 GTTCCCTATGTGTATGTACTGTTGAT 58.727 38.462 0.00 0.00 0.00 2.57
1626 3165 8.418662 GTTCCCTATGTGTATGTACTGTTGATA 58.581 37.037 0.00 0.00 0.00 2.15
1793 4631 1.221466 TGCTCGAAAGGTTGCTGTCG 61.221 55.000 0.00 0.00 34.85 4.35
1831 4680 5.075493 AGCTGCCCTTATCCAGAATTATTG 58.925 41.667 0.00 0.00 0.00 1.90
1844 4693 7.971201 TCCAGAATTATTGCTGATGATCTAGT 58.029 34.615 0.00 0.00 34.06 2.57
1922 4771 2.224523 TGGAATTGGAAAGTCGACAGCT 60.225 45.455 19.50 0.42 42.83 4.24
2023 4872 1.078709 CATGTGTTGCTACCACCTCG 58.921 55.000 0.00 0.00 31.71 4.63
2057 4907 8.848474 TGGGATAAAAAGTTTGTTTTGTTTCA 57.152 26.923 0.00 0.00 32.95 2.69
2066 4916 8.846943 AAGTTTGTTTTGTTTCATCCTTCTTT 57.153 26.923 0.00 0.00 0.00 2.52
2076 4926 8.463930 TGTTTCATCCTTCTTTTATGAACTGT 57.536 30.769 0.00 0.00 38.87 3.55
2077 4927 8.352201 TGTTTCATCCTTCTTTTATGAACTGTG 58.648 33.333 0.00 0.00 38.87 3.66
2272 5385 7.234355 TGAGACACATATATAGGAAGCTCTCA 58.766 38.462 0.54 7.45 0.00 3.27
2289 5402 7.187824 AGCTCTCAATGTCCTCTTTACAATA 57.812 36.000 0.00 0.00 0.00 1.90
2291 5404 8.103305 AGCTCTCAATGTCCTCTTTACAATAAA 58.897 33.333 0.00 0.00 0.00 1.40
2411 5524 5.957771 AGCAATGTTCTCTTCCACCTATA 57.042 39.130 0.00 0.00 0.00 1.31
2412 5525 6.506538 AGCAATGTTCTCTTCCACCTATAT 57.493 37.500 0.00 0.00 0.00 0.86
2433 5549 3.272574 ACATTCAGCCATAGGAGTGTG 57.727 47.619 0.00 0.00 33.45 3.82
2747 6452 5.024785 ACCGGAATGTAGAAGATCTTTCC 57.975 43.478 9.46 10.20 35.74 3.13
3058 6768 4.717991 TGTCCGATTTTATTTGCTGTTCG 58.282 39.130 0.00 0.00 0.00 3.95
3107 6817 2.177394 TACGCTGCCATTTTCAGTCA 57.823 45.000 0.00 0.00 34.21 3.41
3191 6901 8.723942 AGATGAAGCACTTACATTTAAGGTAG 57.276 34.615 3.78 0.00 39.36 3.18
3256 6969 6.544197 TGAAGTTTGTTCTTATGTTAGTGCCA 59.456 34.615 0.00 0.00 0.00 4.92
3270 6984 5.008613 TGTTAGTGCCAACTTTCAGATTGTC 59.991 40.000 0.00 0.00 37.88 3.18
3474 7194 4.078922 TGTCTATCTCCACTCCTTCCTCAT 60.079 45.833 0.00 0.00 0.00 2.90
3514 7234 6.408858 TCTCTCTGTCAACATTTTTATCGC 57.591 37.500 0.00 0.00 0.00 4.58
3523 7243 6.303259 GTCAACATTTTTATCGCTCAAGTCAC 59.697 38.462 0.00 0.00 0.00 3.67
3624 7415 5.457197 CCATGAGGATCCATATCAAGGTTGT 60.457 44.000 15.82 0.00 36.89 3.32
3725 7516 9.868277 TGTTTAAATTCCAAAGGCAATACATAG 57.132 29.630 0.00 0.00 0.00 2.23
3892 7822 9.827411 GGATACAATTGAGTTTTCTGTTAGTTC 57.173 33.333 13.59 0.00 0.00 3.01
3902 7901 8.964476 AGTTTTCTGTTAGTTCAGATTCTGAA 57.036 30.769 22.26 22.26 46.50 3.02
3978 7977 5.643777 TCTTTTATTACTGTCAGCTTCCTGC 59.356 40.000 0.00 0.00 39.00 4.85
4276 8286 2.807967 GCTTGAAACAAAATTCCAGGGC 59.192 45.455 0.00 0.00 0.00 5.19
4472 8482 5.262588 TCCTTCTTTTGCCTGAACTTTTC 57.737 39.130 0.00 0.00 0.00 2.29
4618 8715 6.072728 ACTGTCCTTTTTGCCTTTTGTTTTTC 60.073 34.615 0.00 0.00 0.00 2.29
4622 8719 8.673711 GTCCTTTTTGCCTTTTGTTTTTCTTAT 58.326 29.630 0.00 0.00 0.00 1.73
4707 8827 9.609346 TCTGCCTTTTAGGTATTTTATGTACTC 57.391 33.333 0.00 0.00 37.80 2.59
4708 8828 8.741603 TGCCTTTTAGGTATTTTATGTACTCC 57.258 34.615 0.00 0.00 37.80 3.85
4709 8829 7.776500 TGCCTTTTAGGTATTTTATGTACTCCC 59.224 37.037 0.00 0.00 37.80 4.30
4711 8831 9.557061 CCTTTTAGGTATTTTATGTACTCCCTC 57.443 37.037 0.00 0.00 0.00 4.30
4712 8832 9.557061 CTTTTAGGTATTTTATGTACTCCCTCC 57.443 37.037 0.00 0.00 0.00 4.30
4713 8833 5.803237 AGGTATTTTATGTACTCCCTCCG 57.197 43.478 0.00 0.00 0.00 4.63
4715 8835 6.082707 AGGTATTTTATGTACTCCCTCCGAT 58.917 40.000 0.00 0.00 0.00 4.18
4716 8836 6.210984 AGGTATTTTATGTACTCCCTCCGATC 59.789 42.308 0.00 0.00 0.00 3.69
4717 8837 4.950205 TTTTATGTACTCCCTCCGATCC 57.050 45.455 0.00 0.00 0.00 3.36
4718 8838 3.605726 TTATGTACTCCCTCCGATCCA 57.394 47.619 0.00 0.00 0.00 3.41
4719 8839 2.704190 ATGTACTCCCTCCGATCCAT 57.296 50.000 0.00 0.00 0.00 3.41
4720 8840 3.827817 ATGTACTCCCTCCGATCCATA 57.172 47.619 0.00 0.00 0.00 2.74
4721 8841 3.827817 TGTACTCCCTCCGATCCATAT 57.172 47.619 0.00 0.00 0.00 1.78
4722 8842 4.127918 TGTACTCCCTCCGATCCATATT 57.872 45.455 0.00 0.00 0.00 1.28
4723 8843 4.489737 TGTACTCCCTCCGATCCATATTT 58.510 43.478 0.00 0.00 0.00 1.40
4724 8844 5.647230 TGTACTCCCTCCGATCCATATTTA 58.353 41.667 0.00 0.00 0.00 1.40
4725 8845 6.261435 TGTACTCCCTCCGATCCATATTTAT 58.739 40.000 0.00 0.00 0.00 1.40
4726 8846 6.729100 TGTACTCCCTCCGATCCATATTTATT 59.271 38.462 0.00 0.00 0.00 1.40
4727 8847 6.054860 ACTCCCTCCGATCCATATTTATTG 57.945 41.667 0.00 0.00 0.00 1.90
4728 8848 5.785423 ACTCCCTCCGATCCATATTTATTGA 59.215 40.000 0.00 0.00 0.00 2.57
4729 8849 6.049955 TCCCTCCGATCCATATTTATTGAC 57.950 41.667 0.00 0.00 0.00 3.18
4730 8850 4.870426 CCCTCCGATCCATATTTATTGACG 59.130 45.833 0.00 0.00 0.00 4.35
4731 8851 4.330074 CCTCCGATCCATATTTATTGACGC 59.670 45.833 0.00 0.00 0.00 5.19
4732 8852 4.888917 TCCGATCCATATTTATTGACGCA 58.111 39.130 0.00 0.00 0.00 5.24
4733 8853 4.688879 TCCGATCCATATTTATTGACGCAC 59.311 41.667 0.00 0.00 0.00 5.34
4734 8854 4.450757 CCGATCCATATTTATTGACGCACA 59.549 41.667 0.00 0.00 0.00 4.57
4735 8855 5.374080 CGATCCATATTTATTGACGCACAC 58.626 41.667 0.00 0.00 0.00 3.82
4736 8856 5.177511 CGATCCATATTTATTGACGCACACT 59.822 40.000 0.00 0.00 0.00 3.55
4737 8857 6.292865 CGATCCATATTTATTGACGCACACTT 60.293 38.462 0.00 0.00 0.00 3.16
4738 8858 7.095816 CGATCCATATTTATTGACGCACACTTA 60.096 37.037 0.00 0.00 0.00 2.24
4739 8859 7.477144 TCCATATTTATTGACGCACACTTAG 57.523 36.000 0.00 0.00 0.00 2.18
4740 8860 7.045416 TCCATATTTATTGACGCACACTTAGT 58.955 34.615 0.00 0.00 0.00 2.24
4741 8861 8.198778 TCCATATTTATTGACGCACACTTAGTA 58.801 33.333 0.00 0.00 0.00 1.82
4742 8862 8.273557 CCATATTTATTGACGCACACTTAGTAC 58.726 37.037 0.00 0.00 0.00 2.73
4743 8863 8.813282 CATATTTATTGACGCACACTTAGTACA 58.187 33.333 0.00 0.00 0.00 2.90
4744 8864 7.661127 ATTTATTGACGCACACTTAGTACAA 57.339 32.000 0.00 0.00 0.00 2.41
4745 8865 7.661127 TTTATTGACGCACACTTAGTACAAT 57.339 32.000 0.00 0.00 0.00 2.71
4746 8866 7.661127 TTATTGACGCACACTTAGTACAATT 57.339 32.000 0.00 0.00 0.00 2.32
4747 8867 5.994887 TTGACGCACACTTAGTACAATTT 57.005 34.783 0.00 0.00 0.00 1.82
4748 8868 5.994887 TGACGCACACTTAGTACAATTTT 57.005 34.783 0.00 0.00 0.00 1.82
4749 8869 5.743467 TGACGCACACTTAGTACAATTTTG 58.257 37.500 0.00 0.00 0.00 2.44
4750 8870 5.294799 TGACGCACACTTAGTACAATTTTGT 59.705 36.000 1.08 1.08 44.86 2.83
4751 8871 6.479331 TGACGCACACTTAGTACAATTTTGTA 59.521 34.615 0.00 0.00 42.35 2.41
4772 8892 7.416154 TGTACTGAAGTTGTACAAAGTATGC 57.584 36.000 16.85 8.90 44.67 3.14
4773 8893 5.591643 ACTGAAGTTGTACAAAGTATGCG 57.408 39.130 10.51 0.00 0.00 4.73
4774 8894 5.054477 ACTGAAGTTGTACAAAGTATGCGT 58.946 37.500 10.51 0.00 0.00 5.24
4775 8895 5.176958 ACTGAAGTTGTACAAAGTATGCGTC 59.823 40.000 10.51 5.36 0.00 5.19
4776 8896 5.051153 TGAAGTTGTACAAAGTATGCGTCA 58.949 37.500 10.51 7.89 0.00 4.35
4777 8897 5.524281 TGAAGTTGTACAAAGTATGCGTCAA 59.476 36.000 10.51 0.00 0.00 3.18
4778 8898 6.203915 TGAAGTTGTACAAAGTATGCGTCAAT 59.796 34.615 10.51 0.00 0.00 2.57
4779 8899 6.554334 AGTTGTACAAAGTATGCGTCAATT 57.446 33.333 10.51 0.00 0.00 2.32
4780 8900 7.661127 AGTTGTACAAAGTATGCGTCAATTA 57.339 32.000 10.51 0.00 0.00 1.40
4781 8901 8.090250 AGTTGTACAAAGTATGCGTCAATTAA 57.910 30.769 10.51 0.00 0.00 1.40
4782 8902 8.726988 AGTTGTACAAAGTATGCGTCAATTAAT 58.273 29.630 10.51 0.00 0.00 1.40
4783 8903 9.976255 GTTGTACAAAGTATGCGTCAATTAATA 57.024 29.630 10.51 0.00 0.00 0.98
4786 8906 9.594038 GTACAAAGTATGCGTCAATTAATATGG 57.406 33.333 0.00 0.00 0.00 2.74
4787 8907 8.445275 ACAAAGTATGCGTCAATTAATATGGA 57.555 30.769 0.00 0.00 0.00 3.41
4788 8908 9.066892 ACAAAGTATGCGTCAATTAATATGGAT 57.933 29.630 0.00 0.00 0.00 3.41
4791 8911 8.948631 AGTATGCGTCAATTAATATGGATAGG 57.051 34.615 0.00 0.00 0.00 2.57
4792 8912 8.758829 AGTATGCGTCAATTAATATGGATAGGA 58.241 33.333 0.00 0.00 0.00 2.94
4793 8913 9.035607 GTATGCGTCAATTAATATGGATAGGAG 57.964 37.037 0.00 0.00 0.00 3.69
4794 8914 6.406370 TGCGTCAATTAATATGGATAGGAGG 58.594 40.000 0.00 0.00 0.00 4.30
4795 8915 5.294552 GCGTCAATTAATATGGATAGGAGGC 59.705 44.000 0.00 0.00 0.00 4.70
4796 8916 6.406370 CGTCAATTAATATGGATAGGAGGCA 58.594 40.000 0.00 0.00 0.00 4.75
4797 8917 6.536582 CGTCAATTAATATGGATAGGAGGCAG 59.463 42.308 0.00 0.00 0.00 4.85
4798 8918 7.398024 GTCAATTAATATGGATAGGAGGCAGT 58.602 38.462 0.00 0.00 0.00 4.40
4799 8919 8.540388 GTCAATTAATATGGATAGGAGGCAGTA 58.460 37.037 0.00 0.00 0.00 2.74
4800 8920 8.540388 TCAATTAATATGGATAGGAGGCAGTAC 58.460 37.037 0.00 0.00 0.00 2.73
4801 8921 8.543774 CAATTAATATGGATAGGAGGCAGTACT 58.456 37.037 0.00 0.00 0.00 2.73
4802 8922 8.686739 ATTAATATGGATAGGAGGCAGTACTT 57.313 34.615 0.00 0.00 0.00 2.24
4803 8923 8.506196 TTAATATGGATAGGAGGCAGTACTTT 57.494 34.615 0.00 0.00 0.00 2.66
4827 8947 4.409718 TTCCCCTTTTGCTTTTGTTACC 57.590 40.909 0.00 0.00 0.00 2.85
4832 8952 3.794564 CCTTTTGCTTTTGTTACCGTGTC 59.205 43.478 0.00 0.00 0.00 3.67
4843 8963 6.601741 TTGTTACCGTGTCGTTTAAAATCT 57.398 33.333 0.00 0.00 0.00 2.40
4881 9001 8.454106 GGATACTATATGCATGTTCAACAATCC 58.546 37.037 10.16 7.72 0.00 3.01
4888 9008 5.652518 TGCATGTTCAACAATCCATATGTG 58.347 37.500 0.00 0.00 0.00 3.21
4912 9032 1.007118 CCCCCTGCTTAAGTGGGATTT 59.993 52.381 26.82 0.00 43.47 2.17
4913 9033 2.559705 CCCCCTGCTTAAGTGGGATTTT 60.560 50.000 26.82 0.00 43.47 1.82
4927 9047 7.931015 AGTGGGATTTTCAGTATATACCAGA 57.069 36.000 9.32 5.50 0.00 3.86
4937 9057 9.542462 TTTCAGTATATACCAGATACAAAGCAC 57.458 33.333 9.32 0.00 33.05 4.40
4942 9062 3.508845 ACCAGATACAAAGCACTTGGT 57.491 42.857 0.00 0.00 39.56 3.67
4952 9072 1.122019 AGCACTTGGTCCTTCGTCCT 61.122 55.000 0.00 0.00 0.00 3.85
4958 9078 1.707106 TGGTCCTTCGTCCTTGTGTA 58.293 50.000 0.00 0.00 0.00 2.90
4963 9083 2.035449 TCCTTCGTCCTTGTGTACACAG 59.965 50.000 26.52 19.85 42.94 3.66
4989 9109 5.393352 GCTTCAATCCTGTCAAACATATGCA 60.393 40.000 1.58 0.00 0.00 3.96
5043 9163 3.935828 GTCAGCTTGTGGATCCTAACTTC 59.064 47.826 14.23 0.00 0.00 3.01
5149 9269 8.964772 CCTCAAAGGTTATCAAAAGATTCATCT 58.035 33.333 0.00 0.00 39.22 2.90
5280 9400 4.568760 GCTAATGCACCTCAGACTTTACTC 59.431 45.833 0.00 0.00 39.41 2.59
5318 9438 2.885266 TCCTATCGGTAAGTGCAGCTAG 59.115 50.000 0.00 0.00 0.00 3.42
5353 9476 9.124807 GTCAACAAAAGTTATAATAACAGCACC 57.875 33.333 0.00 0.00 0.00 5.01
5400 9523 7.461749 TCCTAACTTTGACTCTGAATTTGGAT 58.538 34.615 0.00 0.00 0.00 3.41
5411 9534 8.868522 ACTCTGAATTTGGATCTATTTGTTCA 57.131 30.769 0.00 0.00 0.00 3.18
5459 9582 3.118884 TGGCTACCTCCGTTTCAGAATAC 60.119 47.826 0.00 0.00 0.00 1.89
5460 9583 3.132467 GGCTACCTCCGTTTCAGAATACT 59.868 47.826 0.00 0.00 0.00 2.12
5645 9769 5.616122 AGGGTCCTACTACTACCTGTGATAT 59.384 44.000 0.00 0.00 33.59 1.63
5651 9775 7.036790 TCCTACTACTACCTGTGATATAGGCAT 60.037 40.741 0.00 0.00 38.96 4.40
5669 9793 3.006940 GCATCACGGTTGATACTTTGGA 58.993 45.455 0.00 0.00 40.79 3.53
5701 9825 2.113986 AACACACTCTGCCTGGGC 59.886 61.111 4.43 4.43 42.35 5.36
5757 9923 3.003763 AAGGGGGAGGCGAGACAC 61.004 66.667 0.00 0.00 0.00 3.67
5766 9932 4.373116 GCGAGACACGGCAAGGGA 62.373 66.667 0.00 0.00 42.83 4.20
5767 9933 2.125912 CGAGACACGGCAAGGGAG 60.126 66.667 0.00 0.00 38.46 4.30
5768 9934 2.435059 GAGACACGGCAAGGGAGC 60.435 66.667 0.00 0.00 0.00 4.70
5769 9935 4.379243 AGACACGGCAAGGGAGCG 62.379 66.667 0.00 0.00 34.64 5.03
5770 9936 4.373116 GACACGGCAAGGGAGCGA 62.373 66.667 0.00 0.00 34.64 4.93
5771 9937 4.681978 ACACGGCAAGGGAGCGAC 62.682 66.667 0.00 0.00 34.64 5.19
5775 9941 4.070552 GGCAAGGGAGCGACGACT 62.071 66.667 0.00 0.00 34.64 4.18
5776 9942 2.811317 GCAAGGGAGCGACGACTG 60.811 66.667 0.00 0.00 0.00 3.51
5777 9943 2.125912 CAAGGGAGCGACGACTGG 60.126 66.667 0.00 0.00 0.00 4.00
5778 9944 2.282958 AAGGGAGCGACGACTGGA 60.283 61.111 0.00 0.00 0.00 3.86
5779 9945 1.906824 AAGGGAGCGACGACTGGAA 60.907 57.895 0.00 0.00 0.00 3.53
5780 9946 2.126031 GGGAGCGACGACTGGAAC 60.126 66.667 0.00 0.00 0.00 3.62
5781 9947 2.504244 GGAGCGACGACTGGAACG 60.504 66.667 0.00 0.00 0.00 3.95
5782 9948 2.254651 GAGCGACGACTGGAACGT 59.745 61.111 0.00 0.00 46.58 3.99
5787 9953 4.169271 ACGACTGGAACGTCTGGA 57.831 55.556 0.00 0.00 39.87 3.86
5788 9954 1.957562 ACGACTGGAACGTCTGGAG 59.042 57.895 0.00 0.00 39.87 3.86
5789 9955 1.213013 CGACTGGAACGTCTGGAGG 59.787 63.158 0.00 0.00 31.73 4.30
5790 9956 1.241990 CGACTGGAACGTCTGGAGGA 61.242 60.000 0.00 0.00 31.73 3.71
5791 9957 0.528470 GACTGGAACGTCTGGAGGAG 59.472 60.000 0.00 0.00 0.00 3.69
5792 9958 1.216710 CTGGAACGTCTGGAGGAGC 59.783 63.158 0.00 0.00 0.00 4.70
5793 9959 1.533033 TGGAACGTCTGGAGGAGCA 60.533 57.895 0.00 0.00 0.00 4.26
5794 9960 1.118965 TGGAACGTCTGGAGGAGCAA 61.119 55.000 0.00 0.00 0.00 3.91
5795 9961 0.390472 GGAACGTCTGGAGGAGCAAG 60.390 60.000 0.00 0.00 0.00 4.01
5796 9962 0.603569 GAACGTCTGGAGGAGCAAGA 59.396 55.000 0.00 0.00 0.00 3.02
5797 9963 0.318762 AACGTCTGGAGGAGCAAGAC 59.681 55.000 0.00 0.00 37.55 3.01
5798 9964 0.827925 ACGTCTGGAGGAGCAAGACA 60.828 55.000 0.00 0.00 40.29 3.41
5805 9971 1.457346 GAGGAGCAAGACAACATGGG 58.543 55.000 0.00 0.00 0.00 4.00
5827 9993 1.251527 ACGTCGGAGCAAGGAGACAT 61.252 55.000 0.00 0.00 33.56 3.06
5855 10021 3.367743 CCAGCAGGCGCAACATGT 61.368 61.111 10.83 0.00 42.27 3.21
5965 10131 5.183904 CCAGAAGAAGTAATCCCAACCTTTG 59.816 44.000 0.00 0.00 0.00 2.77
5989 10155 1.298014 CCTCCTGAACCTGGAGTGC 59.702 63.158 15.56 0.00 44.60 4.40
6043 10209 3.069016 CACCATGGCTGCATTATGATTGT 59.931 43.478 13.04 0.00 0.00 2.71
6045 10211 4.279169 ACCATGGCTGCATTATGATTGTAC 59.721 41.667 13.04 0.00 0.00 2.90
6046 10212 4.521639 CCATGGCTGCATTATGATTGTACT 59.478 41.667 0.00 0.00 0.00 2.73
6047 10213 5.706833 CCATGGCTGCATTATGATTGTACTA 59.293 40.000 0.00 0.00 0.00 1.82
6048 10214 6.348786 CCATGGCTGCATTATGATTGTACTAC 60.349 42.308 0.00 0.00 0.00 2.73
6063 10229 5.887214 TGTACTACCCATTCATGTATGCT 57.113 39.130 6.79 0.00 0.00 3.79
6069 10235 7.749666 ACTACCCATTCATGTATGCTCTTTAT 58.250 34.615 6.79 0.00 0.00 1.40
6070 10236 8.220559 ACTACCCATTCATGTATGCTCTTTATT 58.779 33.333 6.79 0.00 0.00 1.40
6071 10237 9.725019 CTACCCATTCATGTATGCTCTTTATTA 57.275 33.333 6.79 0.00 0.00 0.98
6113 10279 1.878953 TTTTGGTCTCAGGACTTCGC 58.121 50.000 0.00 0.00 41.82 4.70
6131 10297 1.589716 GCCCACAGTCATTGCAGGAC 61.590 60.000 11.46 11.46 35.50 3.85
6236 10404 5.539955 AGAATTGGGTGTTGCTTGAACTTAT 59.460 36.000 0.00 0.00 35.37 1.73
6239 10407 4.211125 TGGGTGTTGCTTGAACTTATGAA 58.789 39.130 0.00 0.00 35.37 2.57
6246 10414 7.587757 GTGTTGCTTGAACTTATGAAACTACTG 59.412 37.037 0.00 0.00 35.37 2.74
6247 10415 7.282224 TGTTGCTTGAACTTATGAAACTACTGT 59.718 33.333 0.00 0.00 35.37 3.55
6303 10471 4.263506 GCCCCATAGCTTGTATTCAGGTAT 60.264 45.833 0.00 0.00 0.00 2.73
6304 10472 5.248640 CCCCATAGCTTGTATTCAGGTATG 58.751 45.833 10.76 10.76 41.16 2.39
6337 10510 2.698274 GTGGGTTTTCCTGGTGAACATT 59.302 45.455 13.83 0.00 40.46 2.71
6344 10517 0.881118 CCTGGTGAACATTGAACCCG 59.119 55.000 0.00 0.00 32.70 5.28
6351 10524 2.890311 TGAACATTGAACCCGCAATCTT 59.110 40.909 0.00 0.00 36.39 2.40
6357 10530 1.065709 TGAACCCGCAATCTTCCTACC 60.066 52.381 0.00 0.00 0.00 3.18
6366 10539 5.336372 CCGCAATCTTCCTACCATTTTCAAA 60.336 40.000 0.00 0.00 0.00 2.69
6390 10563 5.479716 AAAGTCGTATAAGAATTTGCCGG 57.520 39.130 12.24 0.00 37.10 6.13
6419 10593 7.410120 CAAGGTTTGCCTCTTATAATCCTTT 57.590 36.000 0.00 0.00 46.33 3.11
6421 10595 5.360999 AGGTTTGCCTCTTATAATCCTTTGC 59.639 40.000 0.00 0.00 42.67 3.68
6428 10602 5.163152 CCTCTTATAATCCTTTGCCAGACCT 60.163 44.000 0.00 0.00 0.00 3.85
6429 10603 5.684704 TCTTATAATCCTTTGCCAGACCTG 58.315 41.667 0.00 0.00 0.00 4.00
6460 10645 3.637769 AGCACTGGGTTTGTCCTTTTTA 58.362 40.909 0.00 0.00 36.25 1.52
6462 10647 4.099419 AGCACTGGGTTTGTCCTTTTTAAG 59.901 41.667 0.00 0.00 36.25 1.85
6463 10648 4.098807 GCACTGGGTTTGTCCTTTTTAAGA 59.901 41.667 0.00 0.00 36.25 2.10
6465 10650 6.685368 GCACTGGGTTTGTCCTTTTTAAGAAT 60.685 38.462 0.00 0.00 36.25 2.40
6468 10653 7.768582 ACTGGGTTTGTCCTTTTTAAGAATTTG 59.231 33.333 0.00 0.00 36.25 2.32
6469 10654 6.540551 TGGGTTTGTCCTTTTTAAGAATTTGC 59.459 34.615 0.00 0.00 36.25 3.68
6470 10655 6.540551 GGGTTTGTCCTTTTTAAGAATTTGCA 59.459 34.615 0.00 0.00 36.25 4.08
6471 10656 7.228507 GGGTTTGTCCTTTTTAAGAATTTGCAT 59.771 33.333 0.00 0.00 36.25 3.96
6500 10688 5.287752 GCATTGCATGAAATAATATCTGGCG 59.712 40.000 3.15 0.00 0.00 5.69
6532 10721 8.508875 GGAATGCATGAATTTCACTTGAAAATT 58.491 29.630 8.42 2.62 45.81 1.82
6545 10768 3.959535 TGAAAATTCCCATGACAAGCC 57.040 42.857 0.00 0.00 0.00 4.35
6549 10772 1.002069 ATTCCCATGACAAGCCCAGA 58.998 50.000 0.00 0.00 0.00 3.86
6635 10858 1.598962 GCTGCAGCTCAGACCACAA 60.599 57.895 31.33 0.00 45.72 3.33
6642 10865 2.802816 CAGCTCAGACCACAACAAGTAC 59.197 50.000 0.00 0.00 0.00 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 169 0.970937 ATGATCACACGTCCTCCCGT 60.971 55.000 0.00 0.00 42.87 5.28
177 178 1.005662 GTCATCACGCATGATCACACG 60.006 52.381 15.55 15.55 44.13 4.49
180 181 2.538861 CTCTGTCATCACGCATGATCAC 59.461 50.000 0.00 0.00 44.13 3.06
186 187 1.520120 CGCCTCTGTCATCACGCAT 60.520 57.895 0.00 0.00 0.00 4.73
257 258 4.504916 CACGCTGCTAGCTCCGCT 62.505 66.667 21.69 10.49 39.60 5.52
390 391 4.645136 ACGAATCTCCTCTATAAGTGCACA 59.355 41.667 21.04 0.00 0.00 4.57
624 625 7.913674 AACTGCTCCTTTATTCAGAGTTTAG 57.086 36.000 0.00 0.00 0.00 1.85
625 626 9.601217 GATAACTGCTCCTTTATTCAGAGTTTA 57.399 33.333 0.00 0.00 0.00 2.01
626 627 8.325046 AGATAACTGCTCCTTTATTCAGAGTTT 58.675 33.333 0.00 0.00 0.00 2.66
627 628 7.856415 AGATAACTGCTCCTTTATTCAGAGTT 58.144 34.615 0.00 0.00 0.00 3.01
628 629 7.430760 AGATAACTGCTCCTTTATTCAGAGT 57.569 36.000 0.00 0.00 0.00 3.24
629 630 9.823647 TTTAGATAACTGCTCCTTTATTCAGAG 57.176 33.333 0.00 0.00 0.00 3.35
694 695 4.231273 GGCCATCCTACCCCATAATTTTT 58.769 43.478 0.00 0.00 0.00 1.94
695 696 3.753846 CGGCCATCCTACCCCATAATTTT 60.754 47.826 2.24 0.00 0.00 1.82
696 697 2.225017 CGGCCATCCTACCCCATAATTT 60.225 50.000 2.24 0.00 0.00 1.82
697 698 1.354368 CGGCCATCCTACCCCATAATT 59.646 52.381 2.24 0.00 0.00 1.40
698 699 0.991920 CGGCCATCCTACCCCATAAT 59.008 55.000 2.24 0.00 0.00 1.28
699 700 1.131303 CCGGCCATCCTACCCCATAA 61.131 60.000 2.24 0.00 0.00 1.90
700 701 1.537889 CCGGCCATCCTACCCCATA 60.538 63.158 2.24 0.00 0.00 2.74
701 702 2.854032 CCGGCCATCCTACCCCAT 60.854 66.667 2.24 0.00 0.00 4.00
702 703 4.096816 TCCGGCCATCCTACCCCA 62.097 66.667 2.24 0.00 0.00 4.96
703 704 2.668106 TACTCCGGCCATCCTACCCC 62.668 65.000 2.24 0.00 0.00 4.95
704 705 1.152398 TACTCCGGCCATCCTACCC 60.152 63.158 2.24 0.00 0.00 3.69
705 706 1.817911 GCTACTCCGGCCATCCTACC 61.818 65.000 2.24 0.00 0.00 3.18
706 707 1.666580 GCTACTCCGGCCATCCTAC 59.333 63.158 2.24 0.00 0.00 3.18
707 708 4.192950 GCTACTCCGGCCATCCTA 57.807 61.111 2.24 0.00 0.00 2.94
717 718 2.187163 GGTCAAGGCGGCTACTCC 59.813 66.667 13.71 11.13 0.00 3.85
718 719 1.153549 CTGGTCAAGGCGGCTACTC 60.154 63.158 13.71 5.26 0.00 2.59
719 720 1.481056 AACTGGTCAAGGCGGCTACT 61.481 55.000 13.71 0.00 0.00 2.57
720 721 1.003718 AACTGGTCAAGGCGGCTAC 60.004 57.895 13.71 7.78 0.00 3.58
721 722 1.295423 GAACTGGTCAAGGCGGCTA 59.705 57.895 13.71 0.00 0.00 3.93
722 723 2.032681 GAACTGGTCAAGGCGGCT 59.967 61.111 5.25 5.25 0.00 5.52
723 724 3.423154 CGAACTGGTCAAGGCGGC 61.423 66.667 0.00 0.00 0.00 6.53
724 725 2.030562 ACGAACTGGTCAAGGCGG 59.969 61.111 0.00 0.00 33.61 6.13
725 726 2.954753 GCACGAACTGGTCAAGGCG 61.955 63.158 0.00 0.00 34.94 5.52
726 727 2.946762 GCACGAACTGGTCAAGGC 59.053 61.111 0.00 0.00 0.00 4.35
727 728 1.557443 GACGCACGAACTGGTCAAGG 61.557 60.000 0.00 0.00 0.00 3.61
728 729 0.874175 TGACGCACGAACTGGTCAAG 60.874 55.000 0.00 0.00 36.55 3.02
729 730 1.142097 TGACGCACGAACTGGTCAA 59.858 52.632 0.00 0.00 36.55 3.18
730 731 1.590525 GTGACGCACGAACTGGTCA 60.591 57.895 0.00 0.00 37.09 4.02
731 732 1.299926 AGTGACGCACGAACTGGTC 60.300 57.895 0.00 0.00 39.64 4.02
732 733 1.591594 CAGTGACGCACGAACTGGT 60.592 57.895 17.10 0.00 39.64 4.00
733 734 0.667487 ATCAGTGACGCACGAACTGG 60.667 55.000 21.44 10.07 41.34 4.00
734 735 0.710567 GATCAGTGACGCACGAACTG 59.289 55.000 18.13 18.13 42.17 3.16
735 736 0.313987 TGATCAGTGACGCACGAACT 59.686 50.000 0.00 0.00 39.64 3.01
736 737 0.435008 GTGATCAGTGACGCACGAAC 59.565 55.000 11.01 0.00 39.64 3.95
737 738 2.809181 GTGATCAGTGACGCACGAA 58.191 52.632 11.01 0.00 39.64 3.85
738 739 4.552278 GTGATCAGTGACGCACGA 57.448 55.556 11.01 5.91 39.64 4.35
739 740 3.064178 CGTGATCAGTGACGCACG 58.936 61.111 26.06 26.06 46.25 5.34
740 741 0.939577 ACACGTGATCAGTGACGCAC 60.940 55.000 25.01 14.82 38.58 5.34
741 742 0.939106 CACACGTGATCAGTGACGCA 60.939 55.000 25.01 0.00 38.58 5.24
742 743 0.939577 ACACACGTGATCAGTGACGC 60.940 55.000 25.01 1.34 38.58 5.19
743 744 2.325509 TACACACGTGATCAGTGACG 57.674 50.000 25.01 14.69 41.83 4.35
744 745 3.183775 GGTTTACACACGTGATCAGTGAC 59.816 47.826 25.01 15.51 41.83 3.67
745 746 3.069016 AGGTTTACACACGTGATCAGTGA 59.931 43.478 25.01 8.86 41.83 3.41
746 747 3.390135 AGGTTTACACACGTGATCAGTG 58.610 45.455 25.01 12.24 44.57 3.66
747 748 3.321111 AGAGGTTTACACACGTGATCAGT 59.679 43.478 25.01 16.37 0.00 3.41
748 749 3.914312 AGAGGTTTACACACGTGATCAG 58.086 45.455 25.01 11.25 0.00 2.90
749 750 4.055360 CAAGAGGTTTACACACGTGATCA 58.945 43.478 25.01 2.84 0.00 2.92
750 751 4.056050 ACAAGAGGTTTACACACGTGATC 58.944 43.478 25.01 0.00 0.00 2.92
751 752 3.807622 CACAAGAGGTTTACACACGTGAT 59.192 43.478 25.01 12.46 0.00 3.06
752 753 3.191669 CACAAGAGGTTTACACACGTGA 58.808 45.455 25.01 0.00 0.00 4.35
753 754 2.286184 GCACAAGAGGTTTACACACGTG 60.286 50.000 15.48 15.48 0.00 4.49
754 755 1.937899 GCACAAGAGGTTTACACACGT 59.062 47.619 0.00 0.00 0.00 4.49
755 756 2.210116 AGCACAAGAGGTTTACACACG 58.790 47.619 0.00 0.00 0.00 4.49
756 757 3.377172 ACAAGCACAAGAGGTTTACACAC 59.623 43.478 0.00 0.00 0.00 3.82
757 758 3.616219 ACAAGCACAAGAGGTTTACACA 58.384 40.909 0.00 0.00 0.00 3.72
758 759 4.632538 AACAAGCACAAGAGGTTTACAC 57.367 40.909 0.00 0.00 0.00 2.90
759 760 4.702612 TGAAACAAGCACAAGAGGTTTACA 59.297 37.500 0.00 0.00 32.32 2.41
760 761 5.034797 GTGAAACAAGCACAAGAGGTTTAC 58.965 41.667 0.00 0.00 36.31 2.01
761 762 4.097286 GGTGAAACAAGCACAAGAGGTTTA 59.903 41.667 0.00 0.00 39.98 2.01
762 763 3.119137 GGTGAAACAAGCACAAGAGGTTT 60.119 43.478 0.00 0.00 39.98 3.27
763 764 2.427095 GGTGAAACAAGCACAAGAGGTT 59.573 45.455 0.00 0.00 39.98 3.50
764 765 2.024414 GGTGAAACAAGCACAAGAGGT 58.976 47.619 0.00 0.00 39.98 3.85
765 766 1.338020 GGGTGAAACAAGCACAAGAGG 59.662 52.381 0.00 0.00 39.98 3.69
766 767 1.002468 CGGGTGAAACAAGCACAAGAG 60.002 52.381 0.00 0.00 39.98 2.85
767 768 1.021202 CGGGTGAAACAAGCACAAGA 58.979 50.000 0.00 0.00 39.98 3.02
768 769 0.738389 ACGGGTGAAACAAGCACAAG 59.262 50.000 0.00 0.00 39.98 3.16
769 770 0.453793 CACGGGTGAAACAAGCACAA 59.546 50.000 0.00 0.00 39.98 3.33
770 771 0.678366 ACACGGGTGAAACAAGCACA 60.678 50.000 5.71 0.00 39.98 4.57
771 772 1.301423 TACACGGGTGAAACAAGCAC 58.699 50.000 0.00 0.00 39.98 4.40
772 773 2.039818 TTACACGGGTGAAACAAGCA 57.960 45.000 0.00 0.00 39.98 3.91
773 774 3.423996 TTTTACACGGGTGAAACAAGC 57.576 42.857 3.26 0.00 39.98 4.01
774 775 6.639279 CCTTTATTTTACACGGGTGAAACAAG 59.361 38.462 10.20 14.07 39.98 3.16
775 776 6.320672 TCCTTTATTTTACACGGGTGAAACAA 59.679 34.615 10.20 1.82 39.98 2.83
776 777 5.826737 TCCTTTATTTTACACGGGTGAAACA 59.173 36.000 10.20 0.00 39.98 2.83
777 778 6.316440 TCCTTTATTTTACACGGGTGAAAC 57.684 37.500 10.20 0.00 35.63 2.78
778 779 5.474189 CCTCCTTTATTTTACACGGGTGAAA 59.526 40.000 10.41 10.41 36.98 2.69
779 780 5.005094 CCTCCTTTATTTTACACGGGTGAA 58.995 41.667 0.00 0.00 0.00 3.18
780 781 4.286549 TCCTCCTTTATTTTACACGGGTGA 59.713 41.667 0.00 0.00 0.00 4.02
781 782 4.581868 TCCTCCTTTATTTTACACGGGTG 58.418 43.478 0.00 0.00 0.00 4.61
782 783 4.533311 TCTCCTCCTTTATTTTACACGGGT 59.467 41.667 0.00 0.00 0.00 5.28
783 784 5.093849 TCTCCTCCTTTATTTTACACGGG 57.906 43.478 0.00 0.00 0.00 5.28
784 785 4.571176 GCTCTCCTCCTTTATTTTACACGG 59.429 45.833 0.00 0.00 0.00 4.94
785 786 4.571176 GGCTCTCCTCCTTTATTTTACACG 59.429 45.833 0.00 0.00 0.00 4.49
786 787 4.882427 GGGCTCTCCTCCTTTATTTTACAC 59.118 45.833 0.00 0.00 0.00 2.90
787 788 4.788617 AGGGCTCTCCTCCTTTATTTTACA 59.211 41.667 0.00 0.00 44.06 2.41
788 789 5.375283 AGGGCTCTCCTCCTTTATTTTAC 57.625 43.478 0.00 0.00 44.06 2.01
824 825 1.694696 ACAGACGCCTCTCCTCTTTTT 59.305 47.619 0.00 0.00 0.00 1.94
825 826 1.343069 ACAGACGCCTCTCCTCTTTT 58.657 50.000 0.00 0.00 0.00 2.27
826 827 1.001406 CAACAGACGCCTCTCCTCTTT 59.999 52.381 0.00 0.00 0.00 2.52
876 878 1.194098 CAGCTTCTGAAACGAGCACAG 59.806 52.381 2.29 0.00 38.85 3.66
883 885 4.611581 GCTTTTAGACCAGCTTCTGAAACG 60.612 45.833 2.18 1.69 32.44 3.60
1203 1376 2.929903 GCTGTGCCCAATTCGCCAA 61.930 57.895 0.00 0.00 0.00 4.52
1204 1377 3.372730 GCTGTGCCCAATTCGCCA 61.373 61.111 0.00 0.00 0.00 5.69
1205 1378 4.133796 GGCTGTGCCCAATTCGCC 62.134 66.667 0.00 0.00 44.06 5.54
1291 2208 0.107361 GGGTCGATCGTGGGGAATTT 60.107 55.000 15.94 0.00 0.00 1.82
1349 2299 6.183359 CGTGTCAAAACAACTTAATATGCAGC 60.183 38.462 0.00 0.00 37.08 5.25
1373 2328 8.861101 GGATTTACTTCACGGAGAATATAATCG 58.139 37.037 0.00 0.00 35.25 3.34
1380 2335 4.225267 AGGTGGATTTACTTCACGGAGAAT 59.775 41.667 0.00 0.00 35.25 2.40
1381 2336 3.581332 AGGTGGATTTACTTCACGGAGAA 59.419 43.478 0.00 0.00 32.65 2.87
1382 2337 3.170717 AGGTGGATTTACTTCACGGAGA 58.829 45.455 0.00 0.00 32.65 3.71
1383 2338 3.611766 AGGTGGATTTACTTCACGGAG 57.388 47.619 0.00 0.00 32.65 4.63
1384 2339 4.960469 AGATAGGTGGATTTACTTCACGGA 59.040 41.667 0.00 0.00 32.65 4.69
1387 2342 6.763610 CAGGAAGATAGGTGGATTTACTTCAC 59.236 42.308 0.00 0.00 35.48 3.18
1388 2343 6.632672 GCAGGAAGATAGGTGGATTTACTTCA 60.633 42.308 0.00 0.00 35.48 3.02
1389 2344 5.760743 GCAGGAAGATAGGTGGATTTACTTC 59.239 44.000 0.00 0.00 33.80 3.01
1390 2345 5.398012 GGCAGGAAGATAGGTGGATTTACTT 60.398 44.000 0.00 0.00 0.00 2.24
1391 2346 4.103311 GGCAGGAAGATAGGTGGATTTACT 59.897 45.833 0.00 0.00 0.00 2.24
1392 2347 4.103311 AGGCAGGAAGATAGGTGGATTTAC 59.897 45.833 0.00 0.00 0.00 2.01
1393 2348 4.307259 AGGCAGGAAGATAGGTGGATTTA 58.693 43.478 0.00 0.00 0.00 1.40
1394 2349 3.126453 AGGCAGGAAGATAGGTGGATTT 58.874 45.455 0.00 0.00 0.00 2.17
1395 2350 2.781667 AGGCAGGAAGATAGGTGGATT 58.218 47.619 0.00 0.00 0.00 3.01
1399 2354 3.054802 AGTTGAAGGCAGGAAGATAGGTG 60.055 47.826 0.00 0.00 0.00 4.00
1401 2356 3.539604 CAGTTGAAGGCAGGAAGATAGG 58.460 50.000 0.00 0.00 0.00 2.57
1402 2357 3.198635 TCCAGTTGAAGGCAGGAAGATAG 59.801 47.826 0.00 0.00 0.00 2.08
1404 2359 1.988107 TCCAGTTGAAGGCAGGAAGAT 59.012 47.619 0.00 0.00 0.00 2.40
1409 2364 1.915141 ACAATCCAGTTGAAGGCAGG 58.085 50.000 0.00 0.00 40.37 4.85
1441 2854 3.505680 TGCATAACAAACCACCATCTCAC 59.494 43.478 0.00 0.00 0.00 3.51
1449 2862 2.352715 GCTTCCCTGCATAACAAACCAC 60.353 50.000 0.00 0.00 0.00 4.16
1475 2892 2.159198 GGACGCCGGAGTAACTTCAATA 60.159 50.000 12.06 0.00 0.00 1.90
1500 2917 1.133216 CTCTTCAGAGATGAACGCGGA 59.867 52.381 12.47 0.00 44.74 5.54
1657 3201 1.895131 GGGCATTTCTGAAGCAAGGAA 59.105 47.619 4.35 0.00 0.00 3.36
1793 4631 2.159462 GGCAGCTTCAAGCATAACAGAC 60.159 50.000 13.10 0.00 45.56 3.51
1831 4680 2.544686 CTGCAAGCACTAGATCATCAGC 59.455 50.000 0.00 0.00 0.00 4.26
1922 4771 4.980573 ACTTGCCACATAACACCTTAAGA 58.019 39.130 3.36 0.00 0.00 2.10
2023 4872 8.500753 ACAAACTTTTTATCCCAAAAGAAACC 57.499 30.769 11.85 0.00 43.70 3.27
2057 4907 6.571150 GCTTGCACAGTTCATAAAAGAAGGAT 60.571 38.462 0.00 0.00 0.00 3.24
2066 4916 3.501828 ACAATCGCTTGCACAGTTCATAA 59.498 39.130 0.00 0.00 35.69 1.90
2076 4926 4.963276 AGCTAAATAACAATCGCTTGCA 57.037 36.364 0.00 0.00 35.69 4.08
2077 4927 5.572896 ACAAAGCTAAATAACAATCGCTTGC 59.427 36.000 0.00 0.00 37.72 4.01
2272 5385 8.082242 GTGTGCTTTTATTGTAAAGAGGACATT 58.918 33.333 14.83 0.00 37.31 2.71
2364 5477 6.159988 ACTAGCCTACTTCGATTGCATATTC 58.840 40.000 0.00 0.00 0.00 1.75
2370 5483 3.243434 TGCTACTAGCCTACTTCGATTGC 60.243 47.826 5.58 0.00 41.51 3.56
2411 5524 4.744867 GCACACTCCTATGGCTGAATGTAT 60.745 45.833 0.00 0.00 0.00 2.29
2412 5525 3.432186 GCACACTCCTATGGCTGAATGTA 60.432 47.826 0.00 0.00 0.00 2.29
2433 5549 7.386299 CAGGACCTCAACAATATTAGACTATGC 59.614 40.741 0.00 0.00 0.00 3.14
2517 6202 7.435192 CAGCACATAATCGTATACTGAAACAGA 59.565 37.037 5.76 0.00 35.18 3.41
2747 6452 2.236223 ATCTCTGCAGCTCACCACCG 62.236 60.000 9.47 0.00 0.00 4.94
2953 6663 1.923204 CGTGAGCAGCTGATACTGAAC 59.077 52.381 20.43 4.59 40.25 3.18
3058 6768 2.736670 ATGCTCCTGGTTTCCCATAC 57.263 50.000 0.00 0.00 40.90 2.39
3107 6817 6.183347 CCAGGAAAACATTGATACCTTCTCT 58.817 40.000 0.00 0.00 0.00 3.10
3191 6901 5.008911 TCAATCATGTGTGCATATGTTAGCC 59.991 40.000 4.29 0.00 33.30 3.93
3256 6969 2.427506 GGCCTCGACAATCTGAAAGTT 58.572 47.619 0.00 0.00 33.76 2.66
3270 6984 1.379044 AGCATTTTCCTGGGCCTCG 60.379 57.895 4.53 0.00 0.00 4.63
3474 7194 2.517553 AGAGATCAGAGATGGGAGGTGA 59.482 50.000 0.00 0.00 0.00 4.02
3514 7234 3.571828 TCCAAGACTCTCAGTGACTTGAG 59.428 47.826 17.13 12.70 44.74 3.02
3523 7243 7.912056 TTTGTATTCATTCCAAGACTCTCAG 57.088 36.000 0.00 0.00 0.00 3.35
3624 7415 6.112734 CAGCACCAGACACCATTACTTATTA 58.887 40.000 0.00 0.00 0.00 0.98
3838 7768 4.283978 TGTTTCCATCAGCACCAAATTCAT 59.716 37.500 0.00 0.00 0.00 2.57
3892 7822 5.180680 TGCATCAAACTGAGTTCAGAATCTG 59.819 40.000 15.63 3.38 46.59 2.90
3902 7901 6.488006 AGAAAGTACAATGCATCAAACTGAGT 59.512 34.615 0.00 0.00 0.00 3.41
3951 7950 6.651225 AGGAAGCTGACAGTAATAAAAGACAC 59.349 38.462 3.99 0.00 0.00 3.67
3978 7977 9.552114 TTAATTTTGACAAAAATGCACACTTTG 57.448 25.926 16.85 12.91 43.63 2.77
3993 7992 9.856162 AGGACTAGTAAAACCTTAATTTTGACA 57.144 29.630 0.00 0.00 33.80 3.58
4276 8286 4.214758 TGATGAAGCAATTGACTCACTGTG 59.785 41.667 10.34 0.17 0.00 3.66
4448 8458 4.926140 AAGTTCAGGCAAAAGAAGGAAG 57.074 40.909 0.00 0.00 0.00 3.46
4529 8541 6.096705 TGAATCTTTTGAACACCACAGAACAT 59.903 34.615 0.00 0.00 0.00 2.71
4596 8608 6.494893 AGAAAAACAAAAGGCAAAAAGGAC 57.505 33.333 0.00 0.00 0.00 3.85
4631 8728 7.994911 TGATAGAGTAGGACATCAATTTTGCAT 59.005 33.333 0.00 0.00 0.00 3.96
4633 8730 7.497249 ACTGATAGAGTAGGACATCAATTTTGC 59.503 37.037 0.00 0.00 30.86 3.68
4634 8731 8.954950 ACTGATAGAGTAGGACATCAATTTTG 57.045 34.615 0.00 0.00 30.86 2.44
4637 8734 9.373450 ACATACTGATAGAGTAGGACATCAATT 57.627 33.333 0.00 0.00 40.74 2.32
4638 8735 8.948401 ACATACTGATAGAGTAGGACATCAAT 57.052 34.615 0.00 0.00 40.74 2.57
4639 8736 9.286170 GTACATACTGATAGAGTAGGACATCAA 57.714 37.037 0.00 0.00 40.74 2.57
4707 8827 4.870426 CGTCAATAAATATGGATCGGAGGG 59.130 45.833 0.00 0.00 0.00 4.30
4708 8828 4.330074 GCGTCAATAAATATGGATCGGAGG 59.670 45.833 0.00 0.00 0.00 4.30
4709 8829 4.929211 TGCGTCAATAAATATGGATCGGAG 59.071 41.667 0.00 0.00 0.00 4.63
4711 8831 4.450757 TGTGCGTCAATAAATATGGATCGG 59.549 41.667 0.00 0.00 0.00 4.18
4712 8832 5.177511 AGTGTGCGTCAATAAATATGGATCG 59.822 40.000 0.00 0.00 0.00 3.69
4713 8833 6.545504 AGTGTGCGTCAATAAATATGGATC 57.454 37.500 0.00 0.00 0.00 3.36
4715 8835 7.045416 ACTAAGTGTGCGTCAATAAATATGGA 58.955 34.615 0.00 0.00 0.00 3.41
4716 8836 7.246674 ACTAAGTGTGCGTCAATAAATATGG 57.753 36.000 0.00 0.00 0.00 2.74
4717 8837 8.813282 TGTACTAAGTGTGCGTCAATAAATATG 58.187 33.333 0.00 0.00 33.83 1.78
4718 8838 8.936070 TGTACTAAGTGTGCGTCAATAAATAT 57.064 30.769 0.00 0.00 33.83 1.28
4719 8839 8.760103 TTGTACTAAGTGTGCGTCAATAAATA 57.240 30.769 0.00 0.00 33.83 1.40
4720 8840 7.661127 TTGTACTAAGTGTGCGTCAATAAAT 57.339 32.000 0.00 0.00 33.83 1.40
4721 8841 7.661127 ATTGTACTAAGTGTGCGTCAATAAA 57.339 32.000 0.00 0.00 33.83 1.40
4722 8842 7.661127 AATTGTACTAAGTGTGCGTCAATAA 57.339 32.000 0.00 0.00 33.83 1.40
4723 8843 7.661127 AAATTGTACTAAGTGTGCGTCAATA 57.339 32.000 0.00 0.00 33.83 1.90
4724 8844 6.554334 AAATTGTACTAAGTGTGCGTCAAT 57.446 33.333 0.00 0.00 33.83 2.57
4725 8845 5.994887 AAATTGTACTAAGTGTGCGTCAA 57.005 34.783 0.00 0.00 33.83 3.18
4726 8846 5.294799 ACAAAATTGTACTAAGTGTGCGTCA 59.705 36.000 0.00 0.00 40.16 4.35
4727 8847 5.744490 ACAAAATTGTACTAAGTGTGCGTC 58.256 37.500 0.00 0.00 40.16 5.19
4728 8848 5.744666 ACAAAATTGTACTAAGTGTGCGT 57.255 34.783 0.00 0.00 40.16 5.24
4749 8869 6.145048 ACGCATACTTTGTACAACTTCAGTAC 59.855 38.462 16.39 7.48 41.63 2.73
4750 8870 6.218019 ACGCATACTTTGTACAACTTCAGTA 58.782 36.000 16.38 16.38 0.00 2.74
4751 8871 5.054477 ACGCATACTTTGTACAACTTCAGT 58.946 37.500 8.07 11.51 0.00 3.41
4752 8872 5.176774 TGACGCATACTTTGTACAACTTCAG 59.823 40.000 8.07 5.62 0.00 3.02
4753 8873 5.051153 TGACGCATACTTTGTACAACTTCA 58.949 37.500 8.07 2.47 0.00 3.02
4754 8874 5.585500 TGACGCATACTTTGTACAACTTC 57.415 39.130 8.07 0.00 0.00 3.01
4755 8875 5.994887 TTGACGCATACTTTGTACAACTT 57.005 34.783 8.07 0.32 0.00 2.66
4756 8876 6.554334 AATTGACGCATACTTTGTACAACT 57.446 33.333 8.07 0.00 0.00 3.16
4757 8877 8.889849 ATTAATTGACGCATACTTTGTACAAC 57.110 30.769 8.07 0.00 0.00 3.32
4760 8880 9.594038 CCATATTAATTGACGCATACTTTGTAC 57.406 33.333 0.00 0.00 0.00 2.90
4761 8881 9.549078 TCCATATTAATTGACGCATACTTTGTA 57.451 29.630 0.00 0.00 0.00 2.41
4762 8882 8.445275 TCCATATTAATTGACGCATACTTTGT 57.555 30.769 0.00 0.00 0.00 2.83
4765 8885 9.383519 CCTATCCATATTAATTGACGCATACTT 57.616 33.333 0.00 0.00 0.00 2.24
4766 8886 8.758829 TCCTATCCATATTAATTGACGCATACT 58.241 33.333 0.00 0.00 0.00 2.12
4767 8887 8.942338 TCCTATCCATATTAATTGACGCATAC 57.058 34.615 0.00 0.00 0.00 2.39
4768 8888 8.204160 CCTCCTATCCATATTAATTGACGCATA 58.796 37.037 0.00 0.00 0.00 3.14
4769 8889 7.050377 CCTCCTATCCATATTAATTGACGCAT 58.950 38.462 0.00 0.00 0.00 4.73
4770 8890 6.406370 CCTCCTATCCATATTAATTGACGCA 58.594 40.000 0.00 0.00 0.00 5.24
4771 8891 5.294552 GCCTCCTATCCATATTAATTGACGC 59.705 44.000 0.00 0.00 0.00 5.19
4772 8892 6.406370 TGCCTCCTATCCATATTAATTGACG 58.594 40.000 0.00 0.00 0.00 4.35
4773 8893 7.398024 ACTGCCTCCTATCCATATTAATTGAC 58.602 38.462 0.00 0.00 0.00 3.18
4774 8894 7.574021 ACTGCCTCCTATCCATATTAATTGA 57.426 36.000 0.00 0.00 0.00 2.57
4775 8895 8.543774 AGTACTGCCTCCTATCCATATTAATTG 58.456 37.037 0.00 0.00 0.00 2.32
4776 8896 8.686739 AGTACTGCCTCCTATCCATATTAATT 57.313 34.615 0.00 0.00 0.00 1.40
4777 8897 8.686739 AAGTACTGCCTCCTATCCATATTAAT 57.313 34.615 0.00 0.00 0.00 1.40
4778 8898 8.506196 AAAGTACTGCCTCCTATCCATATTAA 57.494 34.615 0.00 0.00 0.00 1.40
4779 8899 8.506196 AAAAGTACTGCCTCCTATCCATATTA 57.494 34.615 0.00 0.00 0.00 0.98
4780 8900 7.394144 AAAAGTACTGCCTCCTATCCATATT 57.606 36.000 0.00 0.00 0.00 1.28
4781 8901 7.394144 AAAAAGTACTGCCTCCTATCCATAT 57.606 36.000 0.00 0.00 0.00 1.78
4782 8902 6.824958 AAAAAGTACTGCCTCCTATCCATA 57.175 37.500 0.00 0.00 0.00 2.74
4783 8903 5.717119 AAAAAGTACTGCCTCCTATCCAT 57.283 39.130 0.00 0.00 0.00 3.41
4803 8923 5.648526 GGTAACAAAAGCAAAAGGGGAAAAA 59.351 36.000 0.00 0.00 0.00 1.94
4808 8928 2.101750 ACGGTAACAAAAGCAAAAGGGG 59.898 45.455 0.00 0.00 0.00 4.79
4852 8972 8.922931 TGTTGAACATGCATATAGTATCCAAT 57.077 30.769 0.00 0.00 0.00 3.16
4874 8994 3.299503 GGGGAAGCACATATGGATTGTT 58.700 45.455 7.80 0.00 0.00 2.83
4881 9001 0.184451 AGCAGGGGGAAGCACATATG 59.816 55.000 0.00 0.00 0.00 1.78
4888 9008 0.681243 CCACTTAAGCAGGGGGAAGC 60.681 60.000 1.29 0.00 43.59 3.86
4912 9032 8.924303 AGTGCTTTGTATCTGGTATATACTGAA 58.076 33.333 12.54 0.00 32.19 3.02
4913 9033 8.478775 AGTGCTTTGTATCTGGTATATACTGA 57.521 34.615 12.54 11.12 32.19 3.41
4927 9047 3.074412 CGAAGGACCAAGTGCTTTGTAT 58.926 45.455 2.94 0.00 43.82 2.29
4935 9055 1.202651 ACAAGGACGAAGGACCAAGTG 60.203 52.381 0.00 0.00 0.00 3.16
4937 9057 1.202651 ACACAAGGACGAAGGACCAAG 60.203 52.381 0.00 0.00 0.00 3.61
4942 9062 2.033372 TGTGTACACAAGGACGAAGGA 58.967 47.619 26.07 0.00 38.56 3.36
4952 9072 4.065088 GGATTGAAGCTCTGTGTACACAA 58.935 43.478 27.66 17.53 41.33 3.33
4958 9078 2.369860 TGACAGGATTGAAGCTCTGTGT 59.630 45.455 8.11 0.00 40.13 3.72
4963 9083 6.493116 CATATGTTTGACAGGATTGAAGCTC 58.507 40.000 0.00 0.00 0.00 4.09
4989 9109 7.807977 ACATTCTTAGTCTGAACAAACACAT 57.192 32.000 0.00 0.00 0.00 3.21
5149 9269 3.170791 TGCGGTTTTCTTTGCATGAAA 57.829 38.095 10.21 10.21 31.31 2.69
5280 9400 7.840342 CGATAGGAATTTATTCATCCCAGAG 57.160 40.000 4.97 0.00 38.53 3.35
5318 9438 3.782889 ACTTTTGTTGACAACTCTGGC 57.217 42.857 18.73 0.00 35.28 4.85
5353 9476 6.015940 AGGAAATAAGAAACCAACTTGAGCTG 60.016 38.462 0.00 0.00 0.00 4.24
5384 9507 8.868522 AACAAATAGATCCAAATTCAGAGTCA 57.131 30.769 0.00 0.00 0.00 3.41
5385 9508 8.950210 TGAACAAATAGATCCAAATTCAGAGTC 58.050 33.333 0.00 0.00 0.00 3.36
5472 9595 6.824305 AAATTAGTGGATGAGAACACCAAG 57.176 37.500 0.00 0.00 38.34 3.61
5517 9641 1.610522 GTCAAGTTGCTGCCACAAGAT 59.389 47.619 6.63 0.00 0.00 2.40
5645 9769 4.188462 CAAAGTATCAACCGTGATGCCTA 58.812 43.478 0.00 0.00 45.25 3.93
5651 9775 3.404899 GGTTCCAAAGTATCAACCGTGA 58.595 45.455 0.00 0.00 38.41 4.35
5687 9811 4.341783 GCAGCCCAGGCAGAGTGT 62.342 66.667 12.03 0.00 44.88 3.55
5758 9924 4.070552 AGTCGTCGCTCCCTTGCC 62.071 66.667 0.00 0.00 0.00 4.52
5759 9925 2.811317 CAGTCGTCGCTCCCTTGC 60.811 66.667 0.00 0.00 0.00 4.01
5760 9926 2.125912 CCAGTCGTCGCTCCCTTG 60.126 66.667 0.00 0.00 0.00 3.61
5761 9927 1.906824 TTCCAGTCGTCGCTCCCTT 60.907 57.895 0.00 0.00 0.00 3.95
5762 9928 2.282958 TTCCAGTCGTCGCTCCCT 60.283 61.111 0.00 0.00 0.00 4.20
5763 9929 2.126031 GTTCCAGTCGTCGCTCCC 60.126 66.667 0.00 0.00 0.00 4.30
5764 9930 2.504244 CGTTCCAGTCGTCGCTCC 60.504 66.667 0.00 0.00 0.00 4.70
5765 9931 1.796749 GACGTTCCAGTCGTCGCTC 60.797 63.158 2.93 0.00 45.64 5.03
5766 9932 2.254651 GACGTTCCAGTCGTCGCT 59.745 61.111 2.93 0.00 45.64 4.93
5770 9936 1.524863 CCTCCAGACGTTCCAGTCGT 61.525 60.000 0.00 0.00 45.26 4.34
5771 9937 1.213013 CCTCCAGACGTTCCAGTCG 59.787 63.158 0.00 0.00 45.26 4.18
5772 9938 0.528470 CTCCTCCAGACGTTCCAGTC 59.472 60.000 0.00 0.00 41.23 3.51
5773 9939 1.536943 GCTCCTCCAGACGTTCCAGT 61.537 60.000 0.00 0.00 0.00 4.00
5774 9940 1.216710 GCTCCTCCAGACGTTCCAG 59.783 63.158 0.00 0.00 0.00 3.86
5775 9941 1.118965 TTGCTCCTCCAGACGTTCCA 61.119 55.000 0.00 0.00 0.00 3.53
5776 9942 0.390472 CTTGCTCCTCCAGACGTTCC 60.390 60.000 0.00 0.00 0.00 3.62
5777 9943 0.603569 TCTTGCTCCTCCAGACGTTC 59.396 55.000 0.00 0.00 0.00 3.95
5778 9944 0.318762 GTCTTGCTCCTCCAGACGTT 59.681 55.000 0.00 0.00 0.00 3.99
5779 9945 0.827925 TGTCTTGCTCCTCCAGACGT 60.828 55.000 0.00 0.00 32.68 4.34
5780 9946 0.318441 TTGTCTTGCTCCTCCAGACG 59.682 55.000 0.00 0.00 32.68 4.18
5781 9947 1.070758 TGTTGTCTTGCTCCTCCAGAC 59.929 52.381 0.00 0.00 0.00 3.51
5782 9948 1.423584 TGTTGTCTTGCTCCTCCAGA 58.576 50.000 0.00 0.00 0.00 3.86
5783 9949 2.082231 CATGTTGTCTTGCTCCTCCAG 58.918 52.381 0.00 0.00 0.00 3.86
5784 9950 1.271543 CCATGTTGTCTTGCTCCTCCA 60.272 52.381 0.00 0.00 0.00 3.86
5785 9951 1.457346 CCATGTTGTCTTGCTCCTCC 58.543 55.000 0.00 0.00 0.00 4.30
5786 9952 1.457346 CCCATGTTGTCTTGCTCCTC 58.543 55.000 0.00 0.00 0.00 3.71
5787 9953 0.038744 CCCCATGTTGTCTTGCTCCT 59.961 55.000 0.00 0.00 0.00 3.69
5788 9954 0.967380 CCCCCATGTTGTCTTGCTCC 60.967 60.000 0.00 0.00 0.00 4.70
5789 9955 0.038166 TCCCCCATGTTGTCTTGCTC 59.962 55.000 0.00 0.00 0.00 4.26
5790 9956 0.251341 GTCCCCCATGTTGTCTTGCT 60.251 55.000 0.00 0.00 0.00 3.91
5791 9957 1.586154 CGTCCCCCATGTTGTCTTGC 61.586 60.000 0.00 0.00 0.00 4.01
5792 9958 0.250727 ACGTCCCCCATGTTGTCTTG 60.251 55.000 0.00 0.00 0.00 3.02
5793 9959 0.036306 GACGTCCCCCATGTTGTCTT 59.964 55.000 3.51 0.00 0.00 3.01
5794 9960 1.677552 GACGTCCCCCATGTTGTCT 59.322 57.895 3.51 0.00 0.00 3.41
5795 9961 1.740296 CGACGTCCCCCATGTTGTC 60.740 63.158 10.58 0.00 0.00 3.18
5796 9962 2.345991 CGACGTCCCCCATGTTGT 59.654 61.111 10.58 0.00 0.00 3.32
5797 9963 2.435938 CCGACGTCCCCCATGTTG 60.436 66.667 10.58 0.00 0.00 3.33
5798 9964 2.605295 TCCGACGTCCCCCATGTT 60.605 61.111 10.58 0.00 0.00 2.71
5805 9971 3.358076 CTCCTTGCTCCGACGTCCC 62.358 68.421 10.58 0.00 0.00 4.46
5855 10021 3.053693 CACCAGATTCCATGGGAGGTTAA 60.054 47.826 13.02 0.00 42.48 2.01
6043 10209 6.747414 AAGAGCATACATGAATGGGTAGTA 57.253 37.500 0.00 0.00 0.00 1.82
6045 10211 8.627208 AATAAAGAGCATACATGAATGGGTAG 57.373 34.615 0.00 0.00 0.00 3.18
6046 10212 9.502091 GTAATAAAGAGCATACATGAATGGGTA 57.498 33.333 0.00 0.00 0.00 3.69
6047 10213 7.448469 GGTAATAAAGAGCATACATGAATGGGT 59.552 37.037 0.00 0.00 0.00 4.51
6048 10214 7.667219 AGGTAATAAAGAGCATACATGAATGGG 59.333 37.037 0.00 0.00 0.00 4.00
6069 10235 9.603921 AAAGGTCGATCGATTAATTAAAGGTAA 57.396 29.630 22.50 0.00 0.00 2.85
6070 10236 9.603921 AAAAGGTCGATCGATTAATTAAAGGTA 57.396 29.630 22.50 0.00 0.00 3.08
6071 10237 8.502105 AAAAGGTCGATCGATTAATTAAAGGT 57.498 30.769 22.50 0.00 0.00 3.50
6113 10279 1.300971 CGTCCTGCAATGACTGTGGG 61.301 60.000 12.65 0.00 28.47 4.61
6131 10297 1.136141 GTGTTGCTTCATCTCACAGCG 60.136 52.381 0.00 0.00 36.24 5.18
6236 10404 9.268268 CCTATTACAGAAAACACAGTAGTTTCA 57.732 33.333 9.66 0.00 40.60 2.69
6239 10407 7.742767 ACCCTATTACAGAAAACACAGTAGTT 58.257 34.615 0.00 0.00 0.00 2.24
6246 10414 6.711645 TGGTACAACCCTATTACAGAAAACAC 59.288 38.462 0.00 0.00 37.50 3.32
6247 10415 6.839454 TGGTACAACCCTATTACAGAAAACA 58.161 36.000 0.00 0.00 37.50 2.83
6303 10471 2.969821 AACCCACTGCTTGTATTCCA 57.030 45.000 0.00 0.00 0.00 3.53
6304 10472 3.056821 GGAAAACCCACTGCTTGTATTCC 60.057 47.826 0.00 0.00 34.14 3.01
6305 10473 3.826729 AGGAAAACCCACTGCTTGTATTC 59.173 43.478 0.00 0.00 37.41 1.75
6306 10474 3.573967 CAGGAAAACCCACTGCTTGTATT 59.426 43.478 0.00 0.00 37.41 1.89
6307 10475 3.157087 CAGGAAAACCCACTGCTTGTAT 58.843 45.455 0.00 0.00 37.41 2.29
6337 10510 1.065709 GGTAGGAAGATTGCGGGTTCA 60.066 52.381 0.00 0.00 0.00 3.18
6344 10517 7.961325 TTTTTGAAAATGGTAGGAAGATTGC 57.039 32.000 0.00 0.00 0.00 3.56
6366 10539 6.319399 CCGGCAAATTCTTATACGACTTTTT 58.681 36.000 0.00 0.00 0.00 1.94
6371 10544 2.546789 CCCCGGCAAATTCTTATACGAC 59.453 50.000 0.00 0.00 0.00 4.34
6399 10572 5.127031 TGGCAAAGGATTATAAGAGGCAAAC 59.873 40.000 0.00 0.00 0.00 2.93
6400 10573 5.268387 TGGCAAAGGATTATAAGAGGCAAA 58.732 37.500 0.00 0.00 0.00 3.68
6408 10582 4.792068 CCAGGTCTGGCAAAGGATTATAA 58.208 43.478 3.86 0.00 44.73 0.98
6432 10616 0.798776 CAAACCCAGTGCTAGAAGCG 59.201 55.000 0.00 0.00 46.26 4.68
6460 10645 6.211587 TGCAATGCTACTATGCAAATTCTT 57.788 33.333 6.82 0.00 46.23 2.52
6473 10658 7.487189 GCCAGATATTATTTCATGCAATGCTAC 59.513 37.037 6.82 0.00 46.21 3.58
6500 10688 6.161381 AGTGAAATTCATGCATTCCAAAGAC 58.839 36.000 0.00 0.00 0.00 3.01
6532 10721 0.776810 TTTCTGGGCTTGTCATGGGA 59.223 50.000 0.00 0.00 0.00 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.