Multiple sequence alignment - TraesCS1A01G216900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G216900 chr1A 100.000 6110 0 0 1 6110 384337325 384331216 0.000000e+00 11284.0
1 TraesCS1A01G216900 chr1A 100.000 110 0 0 2771 2880 489169898 489169789 2.890000e-48 204.0
2 TraesCS1A01G216900 chr1A 96.154 52 1 1 3582 3633 343398366 343398416 3.920000e-12 84.2
3 TraesCS1A01G216900 chr1A 97.872 47 1 0 2690 2736 104946101 104946055 1.410000e-11 82.4
4 TraesCS1A01G216900 chr1A 85.915 71 8 2 414 482 547903639 547903709 2.360000e-09 75.0
5 TraesCS1A01G216900 chr1D 97.803 2822 40 6 2876 5694 305589007 305586205 0.000000e+00 4848.0
6 TraesCS1A01G216900 chr1D 96.338 2130 49 14 656 2772 305591118 305589005 0.000000e+00 3474.0
7 TraesCS1A01G216900 chr1D 93.854 602 22 7 1 590 305592303 305591705 0.000000e+00 893.0
8 TraesCS1A01G216900 chr1D 97.500 120 1 2 2771 2890 459859039 459859156 2.890000e-48 204.0
9 TraesCS1A01G216900 chr1D 95.062 81 1 1 587 664 305591237 305591157 2.310000e-24 124.0
10 TraesCS1A01G216900 chr1B 91.159 1312 63 23 4436 5727 412896433 412895155 0.000000e+00 1731.0
11 TraesCS1A01G216900 chr1B 95.708 862 16 11 753 1611 412900031 412899188 0.000000e+00 1367.0
12 TraesCS1A01G216900 chr1B 96.628 771 22 4 3650 4416 412897414 412896644 0.000000e+00 1277.0
13 TraesCS1A01G216900 chr1B 96.173 784 18 6 2876 3651 412898356 412897577 0.000000e+00 1271.0
14 TraesCS1A01G216900 chr1B 93.536 526 16 8 2252 2772 412898866 412898354 0.000000e+00 767.0
15 TraesCS1A01G216900 chr1B 86.328 512 60 9 1754 2261 367561745 367562250 3.220000e-152 549.0
16 TraesCS1A01G216900 chr1B 86.842 266 26 8 5786 6050 31740379 31740122 7.750000e-74 289.0
17 TraesCS1A01G216900 chr1B 86.194 268 26 9 5786 6050 583753873 583754132 4.660000e-71 279.0
18 TraesCS1A01G216900 chr1B 92.638 163 10 2 503 664 412900375 412900214 3.680000e-57 233.0
19 TraesCS1A01G216900 chr1B 93.985 133 5 2 1625 1754 412898998 412898866 1.340000e-46 198.0
20 TraesCS1A01G216900 chr1B 90.476 63 4 2 2676 2736 370729923 370729985 1.410000e-11 82.4
21 TraesCS1A01G216900 chrUn 100.000 389 0 0 4119 4507 480223431 480223819 0.000000e+00 719.0
22 TraesCS1A01G216900 chr7B 87.255 510 57 7 1753 2259 393179000 393178496 5.310000e-160 575.0
23 TraesCS1A01G216900 chr7B 87.327 505 53 10 1753 2253 723622676 723623173 8.890000e-158 568.0
24 TraesCS1A01G216900 chr7B 100.000 45 0 0 3582 3626 255075444 255075400 3.920000e-12 84.2
25 TraesCS1A01G216900 chr7B 94.231 52 3 0 2685 2736 290959642 290959693 5.080000e-11 80.5
26 TraesCS1A01G216900 chr3B 87.352 506 52 11 1753 2253 671671787 671671289 2.470000e-158 569.0
27 TraesCS1A01G216900 chr3B 87.302 504 56 7 1753 2253 764104113 764103615 2.470000e-158 569.0
28 TraesCS1A01G216900 chr3B 83.969 262 36 5 5787 6046 785322090 785321833 4.730000e-61 246.0
29 TraesCS1A01G216900 chr3B 90.141 71 5 1 2529 2599 19389891 19389959 2.350000e-14 91.6
30 TraesCS1A01G216900 chr2B 86.602 515 59 9 1753 2263 631335976 631336484 1.490000e-155 560.0
31 TraesCS1A01G216900 chr2B 86.667 510 60 7 1753 2259 721244860 721245364 5.350000e-155 558.0
32 TraesCS1A01G216900 chr2B 98.246 114 2 0 2771 2884 621062527 621062640 3.730000e-47 200.0
33 TraesCS1A01G216900 chr2B 96.078 51 0 2 3584 3633 651362573 651362524 1.410000e-11 82.4
34 TraesCS1A01G216900 chr2B 97.826 46 1 0 3582 3627 134045500 134045455 5.080000e-11 80.5
35 TraesCS1A01G216900 chr2D 86.931 505 55 10 1753 2253 90901665 90902162 1.920000e-154 556.0
36 TraesCS1A01G216900 chr2D 97.826 46 1 0 3581 3626 83967087 83967042 5.080000e-11 80.5
37 TraesCS1A01G216900 chr2D 92.593 54 3 1 3579 3632 489410906 489410854 6.570000e-10 76.8
38 TraesCS1A01G216900 chr6A 96.341 328 8 3 5786 6110 383589104 383588778 2.510000e-148 536.0
39 TraesCS1A01G216900 chr6A 97.872 47 1 0 3581 3627 427446051 427446097 1.410000e-11 82.4
40 TraesCS1A01G216900 chr6B 94.545 330 12 4 5787 6110 708405914 708405585 7.070000e-139 505.0
41 TraesCS1A01G216900 chr5B 90.429 303 24 3 5813 6110 430304919 430304617 1.600000e-105 394.0
42 TraesCS1A01G216900 chr5B 94.388 196 8 2 5802 5994 295201712 295201907 1.290000e-76 298.0
43 TraesCS1A01G216900 chr5B 98.276 116 1 1 2770 2885 622393444 622393558 1.040000e-47 202.0
44 TraesCS1A01G216900 chr5B 86.517 89 8 2 2648 2736 525815051 525814967 1.810000e-15 95.3
45 TraesCS1A01G216900 chr3A 88.125 320 33 4 5786 6103 28451089 28451405 5.780000e-100 375.0
46 TraesCS1A01G216900 chr3A 84.314 255 34 5 5794 6046 12148126 12147876 1.700000e-60 244.0
47 TraesCS1A01G216900 chr3A 95.868 121 3 1 2760 2880 71250284 71250402 1.740000e-45 195.0
48 TraesCS1A01G216900 chr3A 77.011 174 25 13 2399 2564 517388279 517388113 1.090000e-12 86.1
49 TraesCS1A01G216900 chr3A 95.349 43 2 0 3448 3490 509993906 509993948 1.100000e-07 69.4
50 TraesCS1A01G216900 chr5D 100.000 109 0 0 2770 2878 70640483 70640591 1.040000e-47 202.0
51 TraesCS1A01G216900 chr5D 85.393 89 9 2 2648 2736 432876206 432876122 8.440000e-14 89.8
52 TraesCS1A01G216900 chr2A 99.107 112 1 0 2771 2882 180979155 180979266 1.040000e-47 202.0
53 TraesCS1A01G216900 chr2A 96.639 119 2 1 2760 2878 73898427 73898543 4.830000e-46 196.0
54 TraesCS1A01G216900 chr5A 96.639 119 2 2 2771 2887 9649830 9649948 4.830000e-46 196.0
55 TraesCS1A01G216900 chr4A 88.636 88 6 1 2650 2733 389242323 389242236 3.010000e-18 104.0
56 TraesCS1A01G216900 chr4A 87.692 65 3 5 3476 3537 704166602 704166664 3.060000e-08 71.3
57 TraesCS1A01G216900 chr4A 100.000 30 0 0 2483 2512 159483072 159483043 8.560000e-04 56.5
58 TraesCS1A01G216900 chr3D 92.958 71 5 0 2529 2599 13419448 13419518 3.010000e-18 104.0
59 TraesCS1A01G216900 chr4D 86.813 91 6 2 2650 2734 119751837 119751927 5.040000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G216900 chr1A 384331216 384337325 6109 True 11284.000000 11284 100.00000 1 6110 1 chr1A.!!$R2 6109
1 TraesCS1A01G216900 chr1D 305586205 305592303 6098 True 2334.750000 4848 95.76425 1 5694 4 chr1D.!!$R1 5693
2 TraesCS1A01G216900 chr1B 412895155 412900375 5220 True 977.714286 1731 94.26100 503 5727 7 chr1B.!!$R2 5224
3 TraesCS1A01G216900 chr1B 367561745 367562250 505 False 549.000000 549 86.32800 1754 2261 1 chr1B.!!$F1 507
4 TraesCS1A01G216900 chr7B 393178496 393179000 504 True 575.000000 575 87.25500 1753 2259 1 chr7B.!!$R2 506
5 TraesCS1A01G216900 chr2B 631335976 631336484 508 False 560.000000 560 86.60200 1753 2263 1 chr2B.!!$F2 510
6 TraesCS1A01G216900 chr2B 721244860 721245364 504 False 558.000000 558 86.66700 1753 2259 1 chr2B.!!$F3 506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 388 0.181350 AATCAATGAGGGAGGCCGAC 59.819 55.000 0.00 0.0 0.00 4.79 F
435 447 0.326904 ATGAGGACCTGGATGGCTCA 60.327 55.000 0.00 0.0 38.62 4.26 F
1338 1920 0.700564 TTGCTCTTTCCTGCCAGGAT 59.299 50.000 15.62 0.0 45.34 3.24 F
1972 2744 0.251297 TGCAGCTTATGGTTGGCAGT 60.251 50.000 0.00 0.0 0.00 4.40 F
2791 3570 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.0 0.00 2.83 F
2836 3615 2.034124 AGGCTGTTTTGCACATTGTCT 58.966 42.857 0.00 0.0 33.76 3.41 F
2837 3616 2.129607 GGCTGTTTTGCACATTGTCTG 58.870 47.619 0.00 0.0 33.76 3.51 F
2838 3617 2.223782 GGCTGTTTTGCACATTGTCTGA 60.224 45.455 0.00 0.0 33.76 3.27 F
4961 6118 0.976641 CCTGTGAGGAGCAGTTACCA 59.023 55.000 0.00 0.0 37.67 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1313 1895 0.386478 GCAGGAAAGAGCAAACGCTG 60.386 55.000 0.00 0.00 40.78 5.18 R
1505 2088 1.819288 GCACTGTAGGCTCAGACACTA 59.181 52.381 17.16 0.00 38.63 2.74 R
2816 3595 2.034124 AGACAATGTGCAAAACAGCCT 58.966 42.857 0.00 0.00 43.64 4.58 R
2817 3596 2.129607 CAGACAATGTGCAAAACAGCC 58.870 47.619 0.00 0.00 43.64 4.85 R
4117 5072 3.266772 TGACTTACTGGGGCATTCTGATT 59.733 43.478 0.00 0.00 0.00 2.57 R
4794 5951 1.139058 GCAGATTGTACCTGGGACGAT 59.861 52.381 11.81 11.81 32.51 3.73 R
4887 6044 8.001881 TGAAGAGGACAGTATATGAGAGTTTC 57.998 38.462 0.00 0.00 0.00 2.78 R
4967 6124 7.285858 AGCTGGACCTATATAACGGATCTAATC 59.714 40.741 0.00 0.00 0.00 1.75 R
5890 7071 0.026544 GCACGAAACGACGACCAAAA 59.973 50.000 0.00 0.00 37.03 2.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
111 112 5.302823 AGTCATCTTTCCTCCCTTGTTTTTG 59.697 40.000 0.00 0.00 0.00 2.44
119 120 3.118811 CCTCCCTTGTTTTTGCACTTTCA 60.119 43.478 0.00 0.00 0.00 2.69
124 125 5.163864 CCCTTGTTTTTGCACTTTCACTTTC 60.164 40.000 0.00 0.00 0.00 2.62
125 126 5.407995 CCTTGTTTTTGCACTTTCACTTTCA 59.592 36.000 0.00 0.00 0.00 2.69
126 127 6.092533 CCTTGTTTTTGCACTTTCACTTTCAT 59.907 34.615 0.00 0.00 0.00 2.57
127 128 7.277539 CCTTGTTTTTGCACTTTCACTTTCATA 59.722 33.333 0.00 0.00 0.00 2.15
128 129 8.715191 TTGTTTTTGCACTTTCACTTTCATAT 57.285 26.923 0.00 0.00 0.00 1.78
129 130 9.809096 TTGTTTTTGCACTTTCACTTTCATATA 57.191 25.926 0.00 0.00 0.00 0.86
171 183 9.935682 ATTCAATACTTACAAATTAGCATCACG 57.064 29.630 0.00 0.00 0.00 4.35
355 367 8.710835 AAAGGTGTGTACATGTTTTTAAAAGG 57.289 30.769 2.30 0.00 0.00 3.11
376 388 0.181350 AATCAATGAGGGAGGCCGAC 59.819 55.000 0.00 0.00 0.00 4.79
381 393 0.181350 ATGAGGGAGGCCGACAAATC 59.819 55.000 0.00 0.00 0.00 2.17
407 419 8.865978 CGGGTTTTTAAATATAAGAAACCAAGC 58.134 33.333 17.79 1.38 46.88 4.01
421 433 0.742281 CCAAGCTCGTGTCCATGAGG 60.742 60.000 16.17 2.49 43.05 3.86
435 447 0.326904 ATGAGGACCTGGATGGCTCA 60.327 55.000 0.00 0.00 38.62 4.26
444 456 2.092753 CCTGGATGGCTCAGTTGTACAT 60.093 50.000 0.00 0.00 0.00 2.29
471 483 4.820775 TCCCTAATCAAGTGAGCTAGGAT 58.179 43.478 15.92 0.00 36.44 3.24
481 493 4.053469 GTGAGCTAGGATCACTTCTTCC 57.947 50.000 8.41 0.00 43.03 3.46
639 1125 7.209475 ACATGAACTTTTGTTAGAAATGGTGG 58.791 34.615 0.00 0.00 43.66 4.61
747 1282 2.555199 CGGCCCATTTGACTTCTCTAG 58.445 52.381 0.00 0.00 0.00 2.43
751 1286 3.802866 CCCATTTGACTTCTCTAGCTCC 58.197 50.000 0.00 0.00 0.00 4.70
807 1387 3.420482 GCACAGGTGGGGGCCTAT 61.420 66.667 0.84 0.00 37.04 2.57
808 1388 2.996330 GCACAGGTGGGGGCCTATT 61.996 63.158 0.84 0.00 37.04 1.73
834 1414 8.409358 AAACTAAAATATCTGGCCCATATGTC 57.591 34.615 0.00 0.00 0.00 3.06
898 1480 1.807165 CACACCCAGATCTCGTGCG 60.807 63.158 16.15 6.31 0.00 5.34
1313 1895 3.501062 GTGAGTACCCACAAACTTTAGCC 59.499 47.826 2.15 0.00 37.04 3.93
1332 1914 4.541020 GCGTTTGCTCTTTCCTGC 57.459 55.556 0.00 0.00 38.39 4.85
1338 1920 0.700564 TTGCTCTTTCCTGCCAGGAT 59.299 50.000 15.62 0.00 45.34 3.24
1453 2036 2.199291 GCTGCATGTTAGCAATGGTC 57.801 50.000 16.11 0.00 45.13 4.02
1505 2088 2.455674 TGTGCTTTGACATAGCTCGT 57.544 45.000 17.21 0.00 39.38 4.18
1646 2412 4.973396 TGATTGCACGTCAATTTCATCTC 58.027 39.130 12.42 3.05 44.95 2.75
1691 2459 2.414138 GTGAACCGTACATGTACTTGCC 59.586 50.000 28.53 17.29 34.04 4.52
1832 2601 8.664669 ACAATTTATGTCCTAAATCCAAAGGT 57.335 30.769 0.00 0.00 37.96 3.50
1895 2664 3.873801 GCACCCACCATGTTCTAGAATGT 60.874 47.826 8.75 1.59 0.00 2.71
1897 2666 5.684704 CACCCACCATGTTCTAGAATGTAT 58.315 41.667 8.75 1.52 0.00 2.29
1971 2743 0.889994 TTGCAGCTTATGGTTGGCAG 59.110 50.000 0.00 0.00 0.00 4.85
1972 2744 0.251297 TGCAGCTTATGGTTGGCAGT 60.251 50.000 0.00 0.00 0.00 4.40
2090 2862 7.213678 GGGATTCTTTGTTAACAAATTGTGGA 58.786 34.615 28.88 20.48 43.92 4.02
2674 3453 3.081804 CCCTCCGTCCCATATTAATTGC 58.918 50.000 0.00 0.00 0.00 3.56
2772 3551 9.769093 GTACTTGATGGTGTAAATCATTTGTAC 57.231 33.333 0.00 0.00 34.14 2.90
2773 3552 8.635765 ACTTGATGGTGTAAATCATTTGTACT 57.364 30.769 0.00 0.00 34.14 2.73
2774 3553 8.730680 ACTTGATGGTGTAAATCATTTGTACTC 58.269 33.333 0.00 0.00 34.14 2.59
2775 3554 7.624360 TGATGGTGTAAATCATTTGTACTCC 57.376 36.000 0.00 0.00 33.80 3.85
2776 3555 6.601613 TGATGGTGTAAATCATTTGTACTCCC 59.398 38.462 0.00 0.00 32.74 4.30
2777 3556 6.134535 TGGTGTAAATCATTTGTACTCCCT 57.865 37.500 0.00 0.00 32.74 4.20
2778 3557 6.177610 TGGTGTAAATCATTTGTACTCCCTC 58.822 40.000 0.00 0.00 32.74 4.30
2779 3558 5.589050 GGTGTAAATCATTTGTACTCCCTCC 59.411 44.000 0.00 0.00 0.00 4.30
2780 3559 5.293569 GTGTAAATCATTTGTACTCCCTCCG 59.706 44.000 0.00 0.00 0.00 4.63
2781 3560 4.569719 AAATCATTTGTACTCCCTCCGT 57.430 40.909 0.00 0.00 0.00 4.69
2782 3561 4.569719 AATCATTTGTACTCCCTCCGTT 57.430 40.909 0.00 0.00 0.00 4.44
2783 3562 3.604875 TCATTTGTACTCCCTCCGTTC 57.395 47.619 0.00 0.00 0.00 3.95
2784 3563 2.901192 TCATTTGTACTCCCTCCGTTCA 59.099 45.455 0.00 0.00 0.00 3.18
2785 3564 2.825861 TTTGTACTCCCTCCGTTCAC 57.174 50.000 0.00 0.00 0.00 3.18
2786 3565 2.005370 TTGTACTCCCTCCGTTCACT 57.995 50.000 0.00 0.00 0.00 3.41
2787 3566 2.005370 TGTACTCCCTCCGTTCACTT 57.995 50.000 0.00 0.00 0.00 3.16
2788 3567 2.322658 TGTACTCCCTCCGTTCACTTT 58.677 47.619 0.00 0.00 0.00 2.66
2789 3568 2.701951 TGTACTCCCTCCGTTCACTTTT 59.298 45.455 0.00 0.00 0.00 2.27
2790 3569 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
2791 3570 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
2792 3571 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
2793 3572 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
2794 3573 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
2795 3574 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
2796 3575 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
2797 3576 3.183775 CCTCCGTTCACTTTTGTAAGTCG 59.816 47.826 0.00 0.00 42.67 4.18
2798 3577 3.784338 TCCGTTCACTTTTGTAAGTCGT 58.216 40.909 0.00 0.00 42.67 4.34
2799 3578 4.183101 TCCGTTCACTTTTGTAAGTCGTT 58.817 39.130 0.00 0.00 42.67 3.85
2800 3579 4.630940 TCCGTTCACTTTTGTAAGTCGTTT 59.369 37.500 0.00 0.00 42.67 3.60
2801 3580 4.959757 CCGTTCACTTTTGTAAGTCGTTTC 59.040 41.667 0.00 0.00 42.67 2.78
2802 3581 5.446206 CCGTTCACTTTTGTAAGTCGTTTCA 60.446 40.000 0.00 0.00 42.67 2.69
2803 3582 5.671140 CGTTCACTTTTGTAAGTCGTTTCAG 59.329 40.000 0.00 0.00 42.67 3.02
2804 3583 6.454583 CGTTCACTTTTGTAAGTCGTTTCAGA 60.455 38.462 0.00 0.00 42.67 3.27
2805 3584 6.340537 TCACTTTTGTAAGTCGTTTCAGAC 57.659 37.500 0.00 0.00 42.67 3.51
2806 3585 5.870433 TCACTTTTGTAAGTCGTTTCAGACA 59.130 36.000 0.00 0.00 42.67 3.41
2807 3586 6.369340 TCACTTTTGTAAGTCGTTTCAGACAA 59.631 34.615 0.00 0.00 42.67 3.18
2808 3587 6.464834 CACTTTTGTAAGTCGTTTCAGACAAC 59.535 38.462 0.00 0.00 42.67 3.32
2809 3588 6.370718 ACTTTTGTAAGTCGTTTCAGACAACT 59.629 34.615 0.00 0.00 40.60 3.16
2810 3589 5.961395 TTGTAAGTCGTTTCAGACAACTC 57.039 39.130 0.00 0.00 43.24 3.01
2811 3590 5.001237 TGTAAGTCGTTTCAGACAACTCA 57.999 39.130 0.00 0.00 43.24 3.41
2812 3591 5.412640 TGTAAGTCGTTTCAGACAACTCAA 58.587 37.500 0.00 0.00 43.24 3.02
2813 3592 5.870433 TGTAAGTCGTTTCAGACAACTCAAA 59.130 36.000 0.00 0.00 43.24 2.69
2814 3593 5.873179 AAGTCGTTTCAGACAACTCAAAA 57.127 34.783 0.00 0.00 43.24 2.44
2815 3594 6.436843 AAGTCGTTTCAGACAACTCAAAAT 57.563 33.333 0.00 0.00 43.24 1.82
2816 3595 7.548196 AAGTCGTTTCAGACAACTCAAAATA 57.452 32.000 0.00 0.00 43.24 1.40
2817 3596 7.178712 AGTCGTTTCAGACAACTCAAAATAG 57.821 36.000 0.00 0.00 43.24 1.73
2818 3597 6.202954 AGTCGTTTCAGACAACTCAAAATAGG 59.797 38.462 0.00 0.00 43.24 2.57
2819 3598 5.049680 TCGTTTCAGACAACTCAAAATAGGC 60.050 40.000 0.00 0.00 0.00 3.93
2820 3599 5.049405 CGTTTCAGACAACTCAAAATAGGCT 60.049 40.000 0.00 0.00 0.00 4.58
2821 3600 5.947228 TTCAGACAACTCAAAATAGGCTG 57.053 39.130 0.00 0.00 0.00 4.85
2822 3601 4.973168 TCAGACAACTCAAAATAGGCTGT 58.027 39.130 0.00 0.00 0.00 4.40
2823 3602 5.376625 TCAGACAACTCAAAATAGGCTGTT 58.623 37.500 0.00 0.00 0.00 3.16
2824 3603 5.827797 TCAGACAACTCAAAATAGGCTGTTT 59.172 36.000 3.12 3.12 0.00 2.83
2825 3604 6.321181 TCAGACAACTCAAAATAGGCTGTTTT 59.679 34.615 15.20 15.20 0.00 2.43
2826 3605 6.418819 CAGACAACTCAAAATAGGCTGTTTTG 59.581 38.462 31.63 31.63 44.10 2.44
2827 3606 5.049828 ACAACTCAAAATAGGCTGTTTTGC 58.950 37.500 32.24 0.00 43.04 3.68
2828 3607 4.935352 ACTCAAAATAGGCTGTTTTGCA 57.065 36.364 32.24 23.09 43.04 4.08
2829 3608 4.620982 ACTCAAAATAGGCTGTTTTGCAC 58.379 39.130 32.24 0.00 43.04 4.57
2830 3609 4.099266 ACTCAAAATAGGCTGTTTTGCACA 59.901 37.500 32.24 20.43 43.04 4.57
2831 3610 5.212532 TCAAAATAGGCTGTTTTGCACAT 57.787 34.783 32.24 7.40 43.04 3.21
2832 3611 5.609423 TCAAAATAGGCTGTTTTGCACATT 58.391 33.333 32.24 6.77 43.04 2.71
2833 3612 5.466058 TCAAAATAGGCTGTTTTGCACATTG 59.534 36.000 32.24 16.60 43.04 2.82
2834 3613 4.605640 AATAGGCTGTTTTGCACATTGT 57.394 36.364 0.00 0.00 33.76 2.71
2835 3614 2.514205 AGGCTGTTTTGCACATTGTC 57.486 45.000 0.00 0.00 33.76 3.18
2836 3615 2.034124 AGGCTGTTTTGCACATTGTCT 58.966 42.857 0.00 0.00 33.76 3.41
2837 3616 2.129607 GGCTGTTTTGCACATTGTCTG 58.870 47.619 0.00 0.00 33.76 3.51
2838 3617 2.223782 GGCTGTTTTGCACATTGTCTGA 60.224 45.455 0.00 0.00 33.76 3.27
2839 3618 3.446799 GCTGTTTTGCACATTGTCTGAA 58.553 40.909 0.00 0.00 33.76 3.02
2840 3619 3.864583 GCTGTTTTGCACATTGTCTGAAA 59.135 39.130 0.00 0.00 33.76 2.69
2841 3620 4.508861 GCTGTTTTGCACATTGTCTGAAAT 59.491 37.500 0.00 0.00 33.76 2.17
2842 3621 5.557514 GCTGTTTTGCACATTGTCTGAAATG 60.558 40.000 0.00 9.50 42.21 2.32
2844 3623 5.519566 TGTTTTGCACATTGTCTGAAATGTC 59.480 36.000 12.25 9.51 45.47 3.06
2845 3624 5.518848 TTTGCACATTGTCTGAAATGTCT 57.481 34.783 12.25 0.00 45.47 3.41
2846 3625 5.518848 TTGCACATTGTCTGAAATGTCTT 57.481 34.783 12.25 0.00 45.47 3.01
2847 3626 5.112220 TGCACATTGTCTGAAATGTCTTC 57.888 39.130 12.25 7.82 45.47 2.87
2848 3627 4.579753 TGCACATTGTCTGAAATGTCTTCA 59.420 37.500 12.25 9.40 45.47 3.02
2849 3628 5.067544 TGCACATTGTCTGAAATGTCTTCAA 59.932 36.000 12.25 0.00 45.47 2.69
2850 3629 5.628193 GCACATTGTCTGAAATGTCTTCAAG 59.372 40.000 12.25 5.42 45.47 3.02
2851 3630 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
2852 3631 5.829924 ACATTGTCTGAAATGTCTTCAAGGT 59.170 36.000 10.41 0.00 45.47 3.50
2853 3632 6.016777 ACATTGTCTGAAATGTCTTCAAGGTC 60.017 38.462 10.41 0.00 45.47 3.85
2854 3633 5.296151 TGTCTGAAATGTCTTCAAGGTCT 57.704 39.130 0.00 0.00 0.00 3.85
2855 3634 5.684704 TGTCTGAAATGTCTTCAAGGTCTT 58.315 37.500 0.00 0.00 0.00 3.01
2856 3635 6.826668 TGTCTGAAATGTCTTCAAGGTCTTA 58.173 36.000 0.00 0.00 0.00 2.10
2857 3636 7.453393 TGTCTGAAATGTCTTCAAGGTCTTAT 58.547 34.615 0.00 0.00 0.00 1.73
2858 3637 8.593679 TGTCTGAAATGTCTTCAAGGTCTTATA 58.406 33.333 0.00 0.00 0.00 0.98
2859 3638 9.436957 GTCTGAAATGTCTTCAAGGTCTTATAA 57.563 33.333 0.00 0.00 0.00 0.98
2865 3644 9.793259 AATGTCTTCAAGGTCTTATAAAAGTGA 57.207 29.630 0.00 0.00 34.13 3.41
2866 3645 9.793259 ATGTCTTCAAGGTCTTATAAAAGTGAA 57.207 29.630 0.00 0.00 34.13 3.18
2867 3646 9.052759 TGTCTTCAAGGTCTTATAAAAGTGAAC 57.947 33.333 0.00 0.00 34.13 3.18
2868 3647 9.052759 GTCTTCAAGGTCTTATAAAAGTGAACA 57.947 33.333 0.00 0.00 34.13 3.18
2869 3648 9.273016 TCTTCAAGGTCTTATAAAAGTGAACAG 57.727 33.333 0.00 0.00 34.13 3.16
2870 3649 9.273016 CTTCAAGGTCTTATAAAAGTGAACAGA 57.727 33.333 0.00 0.00 34.13 3.41
2871 3650 8.833231 TCAAGGTCTTATAAAAGTGAACAGAG 57.167 34.615 0.00 0.00 34.13 3.35
2872 3651 7.878127 TCAAGGTCTTATAAAAGTGAACAGAGG 59.122 37.037 0.00 0.00 34.13 3.69
2873 3652 6.712276 AGGTCTTATAAAAGTGAACAGAGGG 58.288 40.000 0.00 0.00 34.13 4.30
2874 3653 6.500751 AGGTCTTATAAAAGTGAACAGAGGGA 59.499 38.462 0.00 0.00 34.13 4.20
2875 3654 6.819146 GGTCTTATAAAAGTGAACAGAGGGAG 59.181 42.308 0.00 0.00 34.13 4.30
2876 3655 7.387643 GTCTTATAAAAGTGAACAGAGGGAGT 58.612 38.462 0.00 0.00 34.13 3.85
2877 3656 8.529476 GTCTTATAAAAGTGAACAGAGGGAGTA 58.471 37.037 0.00 0.00 34.13 2.59
3000 3779 4.090761 TGGTGTCTGCAAAAGAAGATCT 57.909 40.909 0.00 0.00 36.40 2.75
3657 4608 6.982852 AGAATGGACTGTATTATAGGTCACG 58.017 40.000 7.30 0.00 0.00 4.35
3720 4672 6.778834 ACATCATTGCATAGAATGGTGAAA 57.221 33.333 14.75 0.00 44.18 2.69
4794 5951 9.403583 GATATAACTGTTGAAATAAAGGGGACA 57.596 33.333 2.69 0.00 0.00 4.02
4844 6001 4.865365 GCTTATCCAGGTAATAGACATCGC 59.135 45.833 0.00 0.00 0.00 4.58
4887 6044 4.825546 ATGCCATCTTTTAGCAAGATCG 57.174 40.909 0.00 0.00 40.46 3.69
4901 6058 9.464714 TTTAGCAAGATCGAAACTCTCATATAC 57.535 33.333 0.00 0.00 0.00 1.47
4960 6117 0.977395 ACCTGTGAGGAGCAGTTACC 59.023 55.000 0.00 0.00 37.67 2.85
4961 6118 0.976641 CCTGTGAGGAGCAGTTACCA 59.023 55.000 0.00 0.00 37.67 3.25
4967 6124 1.208293 GAGGAGCAGTTACCAAGGAGG 59.792 57.143 0.00 0.00 45.67 4.30
5116 6273 4.142004 CCACTTACCGCTACTAAGATGGTT 60.142 45.833 0.00 0.00 35.40 3.67
5248 6406 0.383231 GTCGTATCGAATCGGGGTGT 59.617 55.000 1.76 0.00 37.72 4.16
5379 6539 5.012655 TGTAATTCAACGTGTGTTCATCG 57.987 39.130 0.00 0.00 35.72 3.84
5462 6622 2.126346 GGCGACATTGTGGCTTGC 60.126 61.111 20.87 3.67 37.43 4.01
5501 6661 4.030216 TCTTTTAAATTGCCCCCAGGATC 58.970 43.478 0.00 0.00 33.47 3.36
5727 6908 4.370364 TTGGTCAAAGCTTTGTCTCAAC 57.630 40.909 32.46 23.80 39.18 3.18
5728 6909 3.351740 TGGTCAAAGCTTTGTCTCAACA 58.648 40.909 32.46 21.97 39.18 3.33
5729 6910 3.761218 TGGTCAAAGCTTTGTCTCAACAA 59.239 39.130 32.46 17.57 43.58 2.83
5742 6923 6.474819 TGTCTCAACAAACATATTACACCG 57.525 37.500 0.00 0.00 30.70 4.94
5743 6924 5.106869 TGTCTCAACAAACATATTACACCGC 60.107 40.000 0.00 0.00 30.70 5.68
5744 6925 4.998033 TCTCAACAAACATATTACACCGCA 59.002 37.500 0.00 0.00 0.00 5.69
5745 6926 5.645929 TCTCAACAAACATATTACACCGCAT 59.354 36.000 0.00 0.00 0.00 4.73
5746 6927 6.819146 TCTCAACAAACATATTACACCGCATA 59.181 34.615 0.00 0.00 0.00 3.14
5747 6928 6.777101 TCAACAAACATATTACACCGCATAC 58.223 36.000 0.00 0.00 0.00 2.39
5748 6929 5.744666 ACAAACATATTACACCGCATACC 57.255 39.130 0.00 0.00 0.00 2.73
5749 6930 4.271533 ACAAACATATTACACCGCATACCG 59.728 41.667 0.00 0.00 0.00 4.02
5758 6939 4.948576 CGCATACCGGCATACGTA 57.051 55.556 0.00 0.00 42.24 3.57
5759 6940 2.427360 CGCATACCGGCATACGTAC 58.573 57.895 0.00 0.00 42.24 3.67
5760 6941 0.039798 CGCATACCGGCATACGTACT 60.040 55.000 0.00 0.00 42.24 2.73
5761 6942 1.197492 CGCATACCGGCATACGTACTA 59.803 52.381 0.00 0.00 42.24 1.82
5762 6943 2.159476 CGCATACCGGCATACGTACTAT 60.159 50.000 0.00 0.00 42.24 2.12
5763 6944 3.063861 CGCATACCGGCATACGTACTATA 59.936 47.826 0.00 0.00 42.24 1.31
5764 6945 4.346129 GCATACCGGCATACGTACTATAC 58.654 47.826 0.00 0.00 42.24 1.47
5765 6946 4.142622 GCATACCGGCATACGTACTATACA 60.143 45.833 0.00 0.00 42.24 2.29
5766 6947 5.449588 GCATACCGGCATACGTACTATACAT 60.450 44.000 0.00 0.00 42.24 2.29
5767 6948 6.238456 GCATACCGGCATACGTACTATACATA 60.238 42.308 0.00 0.00 42.24 2.29
5768 6949 7.679400 GCATACCGGCATACGTACTATACATAA 60.679 40.741 0.00 0.00 42.24 1.90
5769 6950 6.187125 ACCGGCATACGTACTATACATAAG 57.813 41.667 0.00 0.00 42.24 1.73
5770 6951 5.939883 ACCGGCATACGTACTATACATAAGA 59.060 40.000 0.00 0.00 42.24 2.10
5771 6952 6.600822 ACCGGCATACGTACTATACATAAGAT 59.399 38.462 0.00 0.00 42.24 2.40
5772 6953 7.130917 CCGGCATACGTACTATACATAAGATC 58.869 42.308 0.00 0.00 42.24 2.75
5773 6954 7.201670 CCGGCATACGTACTATACATAAGATCA 60.202 40.741 0.00 0.00 42.24 2.92
5774 6955 7.851472 CGGCATACGTACTATACATAAGATCAG 59.149 40.741 0.00 0.00 37.93 2.90
5775 6956 8.675504 GGCATACGTACTATACATAAGATCAGT 58.324 37.037 0.00 0.00 0.00 3.41
5787 6968 7.627298 ACATAAGATCAGTACGTACAAGTCT 57.373 36.000 26.55 20.62 0.00 3.24
5788 6969 8.728337 ACATAAGATCAGTACGTACAAGTCTA 57.272 34.615 26.55 11.19 0.00 2.59
5789 6970 9.339850 ACATAAGATCAGTACGTACAAGTCTAT 57.660 33.333 26.55 16.24 0.00 1.98
5792 6973 7.727331 AGATCAGTACGTACAAGTCTATACC 57.273 40.000 26.55 5.39 0.00 2.73
5793 6974 7.507829 AGATCAGTACGTACAAGTCTATACCT 58.492 38.462 26.55 7.33 0.00 3.08
5794 6975 8.646004 AGATCAGTACGTACAAGTCTATACCTA 58.354 37.037 26.55 1.50 0.00 3.08
5795 6976 8.600449 ATCAGTACGTACAAGTCTATACCTAC 57.400 38.462 26.55 0.00 0.00 3.18
5796 6977 7.786030 TCAGTACGTACAAGTCTATACCTACT 58.214 38.462 26.55 0.00 0.00 2.57
5797 6978 8.914011 TCAGTACGTACAAGTCTATACCTACTA 58.086 37.037 26.55 0.00 28.37 1.82
5798 6979 9.703892 CAGTACGTACAAGTCTATACCTACTAT 57.296 37.037 26.55 0.00 28.37 2.12
5809 6990 9.657728 AGTCTATACCTACTATTAAAGCAAGGT 57.342 33.333 7.73 7.73 43.76 3.50
5810 6991 9.694137 GTCTATACCTACTATTAAAGCAAGGTG 57.306 37.037 11.26 0.00 42.25 4.00
5811 6992 9.650714 TCTATACCTACTATTAAAGCAAGGTGA 57.349 33.333 11.26 1.29 42.25 4.02
5816 6997 9.780186 ACCTACTATTAAAGCAAGGTGATATTC 57.220 33.333 0.00 0.00 41.27 1.75
5820 7001 9.125026 ACTATTAAAGCAAGGTGATATTCTTGG 57.875 33.333 12.91 1.85 40.31 3.61
5824 7005 5.904362 AGCAAGGTGATATTCTTGGTTTC 57.096 39.130 10.99 0.64 45.69 2.78
5825 7006 4.396166 AGCAAGGTGATATTCTTGGTTTCG 59.604 41.667 10.99 0.00 45.69 3.46
5826 7007 4.156008 GCAAGGTGATATTCTTGGTTTCGT 59.844 41.667 12.91 0.00 40.31 3.85
5827 7008 5.673818 GCAAGGTGATATTCTTGGTTTCGTC 60.674 44.000 12.91 0.00 40.31 4.20
5828 7009 4.514401 AGGTGATATTCTTGGTTTCGTCC 58.486 43.478 0.00 0.00 0.00 4.79
5829 7010 3.626217 GGTGATATTCTTGGTTTCGTCCC 59.374 47.826 0.00 0.00 0.00 4.46
5830 7011 3.308866 GTGATATTCTTGGTTTCGTCCCG 59.691 47.826 0.00 0.00 0.00 5.14
5831 7012 1.729284 TATTCTTGGTTTCGTCCCGC 58.271 50.000 0.00 0.00 0.00 6.13
5832 7013 1.296056 ATTCTTGGTTTCGTCCCGCG 61.296 55.000 0.00 0.00 43.01 6.46
5841 7022 2.710440 TCGTCCCGCGATTAGATGA 58.290 52.632 8.23 6.95 45.68 2.92
5842 7023 1.244816 TCGTCCCGCGATTAGATGAT 58.755 50.000 8.23 0.00 45.68 2.45
5843 7024 1.611977 TCGTCCCGCGATTAGATGATT 59.388 47.619 8.23 0.00 45.68 2.57
5844 7025 2.035449 TCGTCCCGCGATTAGATGATTT 59.965 45.455 8.23 0.00 45.68 2.17
5845 7026 2.800544 CGTCCCGCGATTAGATGATTTT 59.199 45.455 8.23 0.00 44.77 1.82
5846 7027 3.247648 CGTCCCGCGATTAGATGATTTTT 59.752 43.478 8.23 0.00 44.77 1.94
5867 7048 6.627395 TTTTTGAGTTTTTCTATCTGGCGA 57.373 33.333 0.00 0.00 0.00 5.54
5868 7049 5.862924 TTTGAGTTTTTCTATCTGGCGAG 57.137 39.130 0.00 0.00 0.00 5.03
5869 7050 3.861840 TGAGTTTTTCTATCTGGCGAGG 58.138 45.455 0.00 0.00 0.00 4.63
5870 7051 3.260884 TGAGTTTTTCTATCTGGCGAGGT 59.739 43.478 0.00 0.00 0.00 3.85
5871 7052 3.600388 AGTTTTTCTATCTGGCGAGGTG 58.400 45.455 0.00 0.00 0.00 4.00
5872 7053 2.678336 GTTTTTCTATCTGGCGAGGTGG 59.322 50.000 0.00 0.00 0.00 4.61
5873 7054 1.568504 TTTCTATCTGGCGAGGTGGT 58.431 50.000 0.00 0.00 0.00 4.16
5874 7055 2.447408 TTCTATCTGGCGAGGTGGTA 57.553 50.000 0.00 0.00 0.00 3.25
5875 7056 1.688772 TCTATCTGGCGAGGTGGTAC 58.311 55.000 0.00 0.00 0.00 3.34
5876 7057 1.214673 TCTATCTGGCGAGGTGGTACT 59.785 52.381 0.00 0.00 0.00 2.73
5877 7058 2.440627 TCTATCTGGCGAGGTGGTACTA 59.559 50.000 0.00 0.00 0.00 1.82
5878 7059 2.383442 ATCTGGCGAGGTGGTACTAT 57.617 50.000 0.00 0.00 0.00 2.12
5879 7060 2.154567 TCTGGCGAGGTGGTACTATT 57.845 50.000 0.00 0.00 0.00 1.73
5880 7061 2.029623 TCTGGCGAGGTGGTACTATTC 58.970 52.381 0.00 0.00 0.00 1.75
5881 7062 1.754803 CTGGCGAGGTGGTACTATTCA 59.245 52.381 0.00 0.00 0.00 2.57
5882 7063 1.479323 TGGCGAGGTGGTACTATTCAC 59.521 52.381 0.00 0.00 0.00 3.18
5883 7064 1.479323 GGCGAGGTGGTACTATTCACA 59.521 52.381 0.00 0.00 35.74 3.58
5884 7065 2.102588 GGCGAGGTGGTACTATTCACAT 59.897 50.000 0.00 0.00 35.74 3.21
5885 7066 3.123804 GCGAGGTGGTACTATTCACATG 58.876 50.000 0.00 0.00 35.74 3.21
5886 7067 3.717707 CGAGGTGGTACTATTCACATGG 58.282 50.000 0.00 0.00 35.74 3.66
5887 7068 3.383505 CGAGGTGGTACTATTCACATGGA 59.616 47.826 0.00 0.00 35.74 3.41
5888 7069 4.142026 CGAGGTGGTACTATTCACATGGAA 60.142 45.833 0.00 0.00 40.46 3.53
5890 7071 6.327386 AGGTGGTACTATTCACATGGAATT 57.673 37.500 12.69 2.16 43.76 2.17
5891 7072 6.731467 AGGTGGTACTATTCACATGGAATTT 58.269 36.000 12.69 5.75 43.76 1.82
5892 7073 7.182060 AGGTGGTACTATTCACATGGAATTTT 58.818 34.615 12.69 5.50 43.76 1.82
5893 7074 7.673926 AGGTGGTACTATTCACATGGAATTTTT 59.326 33.333 12.69 3.70 43.76 1.94
5894 7075 7.759433 GGTGGTACTATTCACATGGAATTTTTG 59.241 37.037 12.69 6.25 43.76 2.44
5895 7076 7.759433 GTGGTACTATTCACATGGAATTTTTGG 59.241 37.037 12.69 0.00 43.76 3.28
5896 7077 7.453126 TGGTACTATTCACATGGAATTTTTGGT 59.547 33.333 12.69 3.45 43.76 3.67
5897 7078 7.973944 GGTACTATTCACATGGAATTTTTGGTC 59.026 37.037 12.69 2.21 43.76 4.02
5898 7079 6.620678 ACTATTCACATGGAATTTTTGGTCG 58.379 36.000 12.69 0.00 43.76 4.79
5899 7080 4.927978 TTCACATGGAATTTTTGGTCGT 57.072 36.364 0.00 0.00 0.00 4.34
5900 7081 4.497473 TCACATGGAATTTTTGGTCGTC 57.503 40.909 0.00 0.00 0.00 4.20
5901 7082 3.058570 TCACATGGAATTTTTGGTCGTCG 60.059 43.478 0.00 0.00 0.00 5.12
5902 7083 2.882137 ACATGGAATTTTTGGTCGTCGT 59.118 40.909 0.00 0.00 0.00 4.34
5903 7084 3.316868 ACATGGAATTTTTGGTCGTCGTT 59.683 39.130 0.00 0.00 0.00 3.85
5904 7085 4.202070 ACATGGAATTTTTGGTCGTCGTTT 60.202 37.500 0.00 0.00 0.00 3.60
5905 7086 3.954999 TGGAATTTTTGGTCGTCGTTTC 58.045 40.909 0.00 0.00 0.00 2.78
5906 7087 2.968655 GGAATTTTTGGTCGTCGTTTCG 59.031 45.455 0.00 0.00 0.00 3.46
5907 7088 3.546616 GGAATTTTTGGTCGTCGTTTCGT 60.547 43.478 0.00 0.00 0.00 3.85
5908 7089 2.438933 TTTTTGGTCGTCGTTTCGTG 57.561 45.000 0.00 0.00 0.00 4.35
5909 7090 0.026544 TTTTGGTCGTCGTTTCGTGC 59.973 50.000 0.00 0.00 0.00 5.34
5910 7091 2.080116 TTTGGTCGTCGTTTCGTGCG 62.080 55.000 0.00 0.00 0.00 5.34
5911 7092 3.026311 GGTCGTCGTTTCGTGCGT 61.026 61.111 0.00 0.00 0.00 5.24
5912 7093 2.579574 GGTCGTCGTTTCGTGCGTT 61.580 57.895 0.00 0.00 0.00 4.84
5913 7094 1.434379 GTCGTCGTTTCGTGCGTTG 60.434 57.895 0.00 0.00 0.00 4.10
5914 7095 1.585782 TCGTCGTTTCGTGCGTTGA 60.586 52.632 0.00 0.00 0.00 3.18
5915 7096 1.155087 CGTCGTTTCGTGCGTTGAG 60.155 57.895 0.00 0.00 0.00 3.02
5916 7097 1.533988 CGTCGTTTCGTGCGTTGAGA 61.534 55.000 0.00 0.00 0.00 3.27
5917 7098 0.573521 GTCGTTTCGTGCGTTGAGAA 59.426 50.000 0.00 0.00 0.00 2.87
5918 7099 1.005766 GTCGTTTCGTGCGTTGAGAAA 60.006 47.619 0.00 0.00 0.00 2.52
5919 7100 1.659601 TCGTTTCGTGCGTTGAGAAAA 59.340 42.857 0.00 0.00 35.91 2.29
5920 7101 1.765750 CGTTTCGTGCGTTGAGAAAAC 59.234 47.619 0.00 0.00 35.91 2.43
5921 7102 2.776330 GTTTCGTGCGTTGAGAAAACA 58.224 42.857 0.00 0.00 35.91 2.83
5922 7103 3.359654 GTTTCGTGCGTTGAGAAAACAT 58.640 40.909 0.00 0.00 35.91 2.71
5923 7104 4.520078 GTTTCGTGCGTTGAGAAAACATA 58.480 39.130 0.00 0.00 35.91 2.29
5924 7105 4.383774 TTCGTGCGTTGAGAAAACATAG 57.616 40.909 0.00 0.00 0.00 2.23
5925 7106 2.156891 TCGTGCGTTGAGAAAACATAGC 59.843 45.455 0.00 0.00 0.00 2.97
5926 7107 2.724839 CGTGCGTTGAGAAAACATAGCC 60.725 50.000 0.00 0.00 0.00 3.93
5927 7108 1.810151 TGCGTTGAGAAAACATAGCCC 59.190 47.619 0.00 0.00 0.00 5.19
5928 7109 1.810151 GCGTTGAGAAAACATAGCCCA 59.190 47.619 0.00 0.00 0.00 5.36
5929 7110 2.227865 GCGTTGAGAAAACATAGCCCAA 59.772 45.455 0.00 0.00 0.00 4.12
5930 7111 3.305064 GCGTTGAGAAAACATAGCCCAAA 60.305 43.478 0.00 0.00 0.00 3.28
5931 7112 4.475944 CGTTGAGAAAACATAGCCCAAAG 58.524 43.478 0.00 0.00 0.00 2.77
5932 7113 4.615912 CGTTGAGAAAACATAGCCCAAAGG 60.616 45.833 0.00 0.00 0.00 3.11
5948 7129 2.357760 GGCCGTTACGCCTCAACA 60.358 61.111 0.00 0.00 46.10 3.33
5949 7130 2.388232 GGCCGTTACGCCTCAACAG 61.388 63.158 0.00 0.00 46.10 3.16
5950 7131 2.388232 GCCGTTACGCCTCAACAGG 61.388 63.158 0.00 0.00 43.82 4.00
5951 7132 1.740296 CCGTTACGCCTCAACAGGG 60.740 63.158 0.00 0.00 40.75 4.45
5952 7133 1.005394 CGTTACGCCTCAACAGGGT 60.005 57.895 0.00 0.00 40.75 4.34
5953 7134 1.289109 CGTTACGCCTCAACAGGGTG 61.289 60.000 0.00 0.00 40.75 4.61
5954 7135 0.953960 GTTACGCCTCAACAGGGTGG 60.954 60.000 0.00 0.00 40.75 4.61
5955 7136 2.119484 TTACGCCTCAACAGGGTGGG 62.119 60.000 0.00 0.00 40.75 4.61
5957 7138 3.971702 GCCTCAACAGGGTGGGCT 61.972 66.667 8.88 0.00 40.75 5.19
5958 7139 2.846532 CCTCAACAGGGTGGGCTT 59.153 61.111 0.00 0.00 35.89 4.35
5959 7140 1.303643 CCTCAACAGGGTGGGCTTC 60.304 63.158 0.00 0.00 35.89 3.86
5960 7141 1.455849 CTCAACAGGGTGGGCTTCA 59.544 57.895 0.00 0.00 0.00 3.02
5961 7142 0.607489 CTCAACAGGGTGGGCTTCAG 60.607 60.000 0.00 0.00 0.00 3.02
5962 7143 2.116125 AACAGGGTGGGCTTCAGC 59.884 61.111 0.00 0.00 42.74 4.26
5963 7144 3.850098 AACAGGGTGGGCTTCAGCG 62.850 63.158 0.00 0.00 44.29 5.18
5964 7145 4.335647 CAGGGTGGGCTTCAGCGT 62.336 66.667 0.00 2.52 44.29 5.07
5965 7146 3.570212 AGGGTGGGCTTCAGCGTT 61.570 61.111 0.00 0.00 44.29 4.84
5966 7147 3.056328 GGGTGGGCTTCAGCGTTC 61.056 66.667 0.00 0.00 44.29 3.95
5967 7148 3.056328 GGTGGGCTTCAGCGTTCC 61.056 66.667 0.00 0.00 43.26 3.62
5968 7149 2.032681 GTGGGCTTCAGCGTTCCT 59.967 61.111 0.00 0.00 43.26 3.36
5969 7150 2.035442 GTGGGCTTCAGCGTTCCTC 61.035 63.158 0.00 0.00 43.26 3.71
5970 7151 2.217038 TGGGCTTCAGCGTTCCTCT 61.217 57.895 0.00 0.00 43.26 3.69
5971 7152 1.743252 GGGCTTCAGCGTTCCTCTG 60.743 63.158 0.00 0.00 43.26 3.35
5972 7153 1.293498 GGCTTCAGCGTTCCTCTGA 59.707 57.895 0.00 0.00 43.26 3.27
5973 7154 0.107945 GGCTTCAGCGTTCCTCTGAT 60.108 55.000 0.00 0.00 39.96 2.90
5974 7155 1.005340 GCTTCAGCGTTCCTCTGATG 58.995 55.000 0.00 0.00 39.96 3.07
5975 7156 1.649664 CTTCAGCGTTCCTCTGATGG 58.350 55.000 0.00 0.00 39.96 3.51
5976 7157 0.250234 TTCAGCGTTCCTCTGATGGG 59.750 55.000 0.00 0.00 39.96 4.00
5977 7158 1.817099 CAGCGTTCCTCTGATGGGC 60.817 63.158 0.00 0.00 33.54 5.36
5978 7159 2.514824 GCGTTCCTCTGATGGGCC 60.515 66.667 0.00 0.00 0.00 5.80
5979 7160 3.036429 GCGTTCCTCTGATGGGCCT 62.036 63.158 4.53 0.00 0.00 5.19
5980 7161 1.153289 CGTTCCTCTGATGGGCCTG 60.153 63.158 4.53 0.00 0.00 4.85
5981 7162 1.452833 GTTCCTCTGATGGGCCTGC 60.453 63.158 4.53 0.00 0.00 4.85
5982 7163 1.617536 TTCCTCTGATGGGCCTGCT 60.618 57.895 4.53 0.00 0.00 4.24
5983 7164 1.630126 TTCCTCTGATGGGCCTGCTC 61.630 60.000 4.53 0.00 0.00 4.26
5984 7165 2.509916 CTCTGATGGGCCTGCTCC 59.490 66.667 4.53 0.00 0.00 4.70
5985 7166 2.041762 TCTGATGGGCCTGCTCCT 59.958 61.111 4.53 0.00 0.00 3.69
5986 7167 0.762082 CTCTGATGGGCCTGCTCCTA 60.762 60.000 4.53 0.00 0.00 2.94
5987 7168 1.050988 TCTGATGGGCCTGCTCCTAC 61.051 60.000 4.53 0.00 0.00 3.18
5988 7169 2.049627 CTGATGGGCCTGCTCCTACC 62.050 65.000 4.53 0.00 0.00 3.18
5989 7170 3.164269 ATGGGCCTGCTCCTACCG 61.164 66.667 4.53 0.00 0.00 4.02
5993 7174 3.787001 GCCTGCTCCTACCGCCTT 61.787 66.667 0.00 0.00 0.00 4.35
5994 7175 2.432300 GCCTGCTCCTACCGCCTTA 61.432 63.158 0.00 0.00 0.00 2.69
5995 7176 1.442148 CCTGCTCCTACCGCCTTAC 59.558 63.158 0.00 0.00 0.00 2.34
5996 7177 1.065928 CTGCTCCTACCGCCTTACG 59.934 63.158 0.00 0.00 43.15 3.18
6038 7219 6.823678 ATACGTTCCAATTATGAGTCGAAC 57.176 37.500 0.00 0.00 0.00 3.95
6039 7220 4.817517 ACGTTCCAATTATGAGTCGAACT 58.182 39.130 0.00 0.00 0.00 3.01
6040 7221 4.863131 ACGTTCCAATTATGAGTCGAACTC 59.137 41.667 7.74 7.74 45.26 3.01
6041 7222 4.267928 CGTTCCAATTATGAGTCGAACTCC 59.732 45.833 11.01 0.00 44.44 3.85
6042 7223 4.402056 TCCAATTATGAGTCGAACTCCC 57.598 45.455 11.01 0.00 44.44 4.30
6043 7224 3.772572 TCCAATTATGAGTCGAACTCCCA 59.227 43.478 11.01 0.00 44.44 4.37
6044 7225 4.224147 TCCAATTATGAGTCGAACTCCCAA 59.776 41.667 11.01 6.67 44.44 4.12
6045 7226 4.332819 CCAATTATGAGTCGAACTCCCAAC 59.667 45.833 11.01 0.00 44.44 3.77
6046 7227 3.604875 TTATGAGTCGAACTCCCAACC 57.395 47.619 11.01 0.00 44.44 3.77
6047 7228 1.645710 ATGAGTCGAACTCCCAACCT 58.354 50.000 11.01 0.00 44.44 3.50
6048 7229 0.966920 TGAGTCGAACTCCCAACCTC 59.033 55.000 11.01 0.88 44.44 3.85
6049 7230 1.258676 GAGTCGAACTCCCAACCTCT 58.741 55.000 0.00 0.00 39.28 3.69
6050 7231 2.224942 TGAGTCGAACTCCCAACCTCTA 60.225 50.000 11.01 0.00 44.44 2.43
6051 7232 2.164017 GAGTCGAACTCCCAACCTCTAC 59.836 54.545 0.00 0.00 39.28 2.59
6052 7233 2.169330 GTCGAACTCCCAACCTCTACT 58.831 52.381 0.00 0.00 0.00 2.57
6053 7234 2.561858 GTCGAACTCCCAACCTCTACTT 59.438 50.000 0.00 0.00 0.00 2.24
6054 7235 2.824341 TCGAACTCCCAACCTCTACTTC 59.176 50.000 0.00 0.00 0.00 3.01
6055 7236 2.561419 CGAACTCCCAACCTCTACTTCA 59.439 50.000 0.00 0.00 0.00 3.02
6056 7237 3.367498 CGAACTCCCAACCTCTACTTCAG 60.367 52.174 0.00 0.00 0.00 3.02
6057 7238 3.261818 ACTCCCAACCTCTACTTCAGT 57.738 47.619 0.00 0.00 0.00 3.41
6058 7239 3.166679 ACTCCCAACCTCTACTTCAGTC 58.833 50.000 0.00 0.00 0.00 3.51
6059 7240 3.181416 ACTCCCAACCTCTACTTCAGTCT 60.181 47.826 0.00 0.00 0.00 3.24
6060 7241 4.044317 ACTCCCAACCTCTACTTCAGTCTA 59.956 45.833 0.00 0.00 0.00 2.59
6061 7242 4.342359 TCCCAACCTCTACTTCAGTCTAC 58.658 47.826 0.00 0.00 0.00 2.59
6062 7243 4.087182 CCCAACCTCTACTTCAGTCTACA 58.913 47.826 0.00 0.00 0.00 2.74
6063 7244 4.712337 CCCAACCTCTACTTCAGTCTACAT 59.288 45.833 0.00 0.00 0.00 2.29
6064 7245 5.892119 CCCAACCTCTACTTCAGTCTACATA 59.108 44.000 0.00 0.00 0.00 2.29
6065 7246 6.039941 CCCAACCTCTACTTCAGTCTACATAG 59.960 46.154 0.00 0.00 0.00 2.23
6066 7247 6.039941 CCAACCTCTACTTCAGTCTACATAGG 59.960 46.154 0.00 0.00 0.00 2.57
6067 7248 6.330178 ACCTCTACTTCAGTCTACATAGGT 57.670 41.667 0.00 0.00 0.00 3.08
6068 7249 6.123651 ACCTCTACTTCAGTCTACATAGGTG 58.876 44.000 0.00 0.00 32.55 4.00
6069 7250 5.009210 CCTCTACTTCAGTCTACATAGGTGC 59.991 48.000 0.00 0.00 0.00 5.01
6070 7251 5.756918 TCTACTTCAGTCTACATAGGTGCT 58.243 41.667 0.00 0.00 0.00 4.40
6071 7252 4.727507 ACTTCAGTCTACATAGGTGCTG 57.272 45.455 0.00 0.00 0.00 4.41
6072 7253 3.449018 ACTTCAGTCTACATAGGTGCTGG 59.551 47.826 8.10 0.00 0.00 4.85
6073 7254 1.757118 TCAGTCTACATAGGTGCTGGC 59.243 52.381 8.10 0.00 0.00 4.85
6074 7255 1.123928 AGTCTACATAGGTGCTGGCC 58.876 55.000 0.00 0.00 0.00 5.36
6075 7256 0.830648 GTCTACATAGGTGCTGGCCA 59.169 55.000 4.71 4.71 0.00 5.36
6076 7257 1.123077 TCTACATAGGTGCTGGCCAG 58.877 55.000 29.34 29.34 0.00 4.85
6086 7267 4.162690 CTGGCCAGCCGACCTACC 62.163 72.222 22.33 0.00 39.42 3.18
6087 7268 4.715130 TGGCCAGCCGACCTACCT 62.715 66.667 0.00 0.00 39.42 3.08
6088 7269 3.400054 GGCCAGCCGACCTACCTT 61.400 66.667 0.00 0.00 0.00 3.50
6089 7270 2.187163 GCCAGCCGACCTACCTTC 59.813 66.667 0.00 0.00 0.00 3.46
6090 7271 2.656069 GCCAGCCGACCTACCTTCA 61.656 63.158 0.00 0.00 0.00 3.02
6091 7272 1.517832 CCAGCCGACCTACCTTCAG 59.482 63.158 0.00 0.00 0.00 3.02
6092 7273 1.153549 CAGCCGACCTACCTTCAGC 60.154 63.158 0.00 0.00 0.00 4.26
6093 7274 1.609501 AGCCGACCTACCTTCAGCA 60.610 57.895 0.00 0.00 0.00 4.41
6094 7275 0.978146 AGCCGACCTACCTTCAGCAT 60.978 55.000 0.00 0.00 0.00 3.79
6095 7276 0.107654 GCCGACCTACCTTCAGCATT 60.108 55.000 0.00 0.00 0.00 3.56
6096 7277 1.941325 CCGACCTACCTTCAGCATTC 58.059 55.000 0.00 0.00 0.00 2.67
6097 7278 1.560923 CGACCTACCTTCAGCATTCG 58.439 55.000 0.00 0.00 0.00 3.34
6098 7279 1.802880 CGACCTACCTTCAGCATTCGG 60.803 57.143 0.00 0.00 0.00 4.30
6099 7280 1.207329 GACCTACCTTCAGCATTCGGT 59.793 52.381 0.00 0.00 0.00 4.69
6100 7281 2.429610 GACCTACCTTCAGCATTCGGTA 59.570 50.000 0.00 0.00 0.00 4.02
6101 7282 2.835764 ACCTACCTTCAGCATTCGGTAA 59.164 45.455 0.00 0.00 32.09 2.85
6102 7283 3.262405 ACCTACCTTCAGCATTCGGTAAA 59.738 43.478 0.00 0.00 32.09 2.01
6103 7284 4.080526 ACCTACCTTCAGCATTCGGTAAAT 60.081 41.667 0.00 0.00 32.09 1.40
6104 7285 4.511826 CCTACCTTCAGCATTCGGTAAATC 59.488 45.833 0.00 0.00 32.09 2.17
6105 7286 4.222124 ACCTTCAGCATTCGGTAAATCT 57.778 40.909 0.00 0.00 0.00 2.40
6106 7287 3.941483 ACCTTCAGCATTCGGTAAATCTG 59.059 43.478 0.00 0.00 0.00 2.90
6107 7288 3.941483 CCTTCAGCATTCGGTAAATCTGT 59.059 43.478 0.00 0.00 30.72 3.41
6108 7289 4.201851 CCTTCAGCATTCGGTAAATCTGTG 60.202 45.833 0.00 0.00 30.72 3.66
6109 7290 4.200838 TCAGCATTCGGTAAATCTGTGA 57.799 40.909 0.00 0.00 30.72 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 6.434340 GGGAGGAAAGATGACTACAAAAATGT 59.566 38.462 0.00 0.00 0.00 2.71
133 134 9.834628 TTGTAAGTATTGAATCGTCAAAAATCC 57.165 29.630 0.00 0.00 46.66 3.01
300 312 9.635520 AGAAATGATTCATGCAACTTCTAAAAG 57.364 29.630 8.20 0.00 38.06 2.27
355 367 1.134098 TCGGCCTCCCTCATTGATTTC 60.134 52.381 0.00 0.00 0.00 2.17
360 372 0.322456 TTTGTCGGCCTCCCTCATTG 60.322 55.000 0.00 0.00 0.00 2.82
361 373 0.625849 ATTTGTCGGCCTCCCTCATT 59.374 50.000 0.00 0.00 0.00 2.57
364 376 1.521681 CGATTTGTCGGCCTCCCTC 60.522 63.158 0.00 0.00 0.00 4.30
381 393 8.865978 GCTTGGTTTCTTATATTTAAAAACCCG 58.134 33.333 18.47 14.21 45.27 5.28
421 433 0.326264 ACAACTGAGCCATCCAGGTC 59.674 55.000 0.00 0.00 40.61 3.85
435 447 5.030147 TGATTAGGGAGTGGATGTACAACT 58.970 41.667 0.00 0.00 0.00 3.16
471 483 4.610605 TTGTTCATACCGGAAGAAGTGA 57.389 40.909 9.46 0.00 0.00 3.41
807 1387 9.875708 ACATATGGGCCAGATATTTTAGTTTAA 57.124 29.630 14.29 0.00 0.00 1.52
808 1388 9.515226 GACATATGGGCCAGATATTTTAGTTTA 57.485 33.333 14.29 0.00 0.00 2.01
898 1480 1.385206 AAGGGGATGAGGAGGAGGC 60.385 63.158 0.00 0.00 0.00 4.70
1313 1895 0.386478 GCAGGAAAGAGCAAACGCTG 60.386 55.000 0.00 0.00 40.78 5.18
1332 1914 5.277857 ACTAGTCAATAACGGAATCCTGG 57.722 43.478 0.00 0.00 0.00 4.45
1338 1920 3.839490 TCCCCAACTAGTCAATAACGGAA 59.161 43.478 0.00 0.00 0.00 4.30
1453 2036 3.181454 ACCTATTTACCAGGATTCCAGCG 60.181 47.826 5.29 0.00 36.61 5.18
1505 2088 1.819288 GCACTGTAGGCTCAGACACTA 59.181 52.381 17.16 0.00 38.63 2.74
1646 2412 6.204688 ACCACAATAAATGGCAGTCGTATATG 59.795 38.462 0.00 0.00 41.31 1.78
1691 2459 6.323996 TCTCTAAGATATAACACACCACCCTG 59.676 42.308 0.00 0.00 0.00 4.45
1829 2598 3.868754 GCGAATCCCACTACTTTCAACCT 60.869 47.826 0.00 0.00 0.00 3.50
1832 2601 3.244422 ACTGCGAATCCCACTACTTTCAA 60.244 43.478 0.00 0.00 0.00 2.69
1876 2645 4.516698 GCATACATTCTAGAACATGGTGGG 59.483 45.833 7.48 2.96 0.00 4.61
1895 2664 5.594725 ACGTCTCTTGAGAAGGATTAGCATA 59.405 40.000 15.63 0.00 0.00 3.14
1897 2666 3.764434 ACGTCTCTTGAGAAGGATTAGCA 59.236 43.478 15.63 0.00 0.00 3.49
2090 2862 9.683069 GAAAATCGGAATTAACATATGCAATCT 57.317 29.630 1.58 0.00 0.00 2.40
2674 3453 3.057969 TGTATCCAGCAGTTTGAGTGG 57.942 47.619 0.00 0.00 0.00 4.00
2772 3551 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
2773 3552 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
2774 3553 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
2775 3554 3.183775 CGACTTACAAAAGTGAACGGAGG 59.816 47.826 0.00 0.00 46.09 4.30
2776 3555 3.800506 ACGACTTACAAAAGTGAACGGAG 59.199 43.478 0.00 0.00 46.09 4.63
2777 3556 3.784338 ACGACTTACAAAAGTGAACGGA 58.216 40.909 0.00 0.00 46.09 4.69
2778 3557 4.525411 AACGACTTACAAAAGTGAACGG 57.475 40.909 0.00 0.00 46.09 4.44
2779 3558 5.552807 TGAAACGACTTACAAAAGTGAACG 58.447 37.500 0.00 0.00 46.09 3.95
2780 3559 6.681599 GTCTGAAACGACTTACAAAAGTGAAC 59.318 38.462 0.00 0.00 46.09 3.18
2781 3560 6.369340 TGTCTGAAACGACTTACAAAAGTGAA 59.631 34.615 0.00 0.00 46.09 3.18
2782 3561 5.870433 TGTCTGAAACGACTTACAAAAGTGA 59.130 36.000 0.00 0.00 46.09 3.41
2783 3562 6.102006 TGTCTGAAACGACTTACAAAAGTG 57.898 37.500 0.00 0.00 46.09 3.16
2794 3573 6.363473 CCTATTTTGAGTTGTCTGAAACGAC 58.637 40.000 0.00 0.00 41.93 4.34
2795 3574 5.049680 GCCTATTTTGAGTTGTCTGAAACGA 60.050 40.000 0.00 0.00 35.13 3.85
2796 3575 5.049405 AGCCTATTTTGAGTTGTCTGAAACG 60.049 40.000 0.00 0.00 35.13 3.60
2797 3576 6.145535 CAGCCTATTTTGAGTTGTCTGAAAC 58.854 40.000 0.00 0.00 0.00 2.78
2798 3577 5.827797 ACAGCCTATTTTGAGTTGTCTGAAA 59.172 36.000 0.00 0.00 0.00 2.69
2799 3578 5.376625 ACAGCCTATTTTGAGTTGTCTGAA 58.623 37.500 0.00 0.00 0.00 3.02
2800 3579 4.973168 ACAGCCTATTTTGAGTTGTCTGA 58.027 39.130 0.00 0.00 0.00 3.27
2801 3580 5.695851 AACAGCCTATTTTGAGTTGTCTG 57.304 39.130 0.00 0.00 0.00 3.51
2802 3581 6.507023 CAAAACAGCCTATTTTGAGTTGTCT 58.493 36.000 1.96 0.00 45.75 3.41
2803 3582 5.175673 GCAAAACAGCCTATTTTGAGTTGTC 59.824 40.000 12.19 0.00 45.75 3.18
2804 3583 5.049828 GCAAAACAGCCTATTTTGAGTTGT 58.950 37.500 12.19 0.00 45.75 3.32
2805 3584 5.049167 TGCAAAACAGCCTATTTTGAGTTG 58.951 37.500 12.19 4.12 45.75 3.16
2806 3585 5.049828 GTGCAAAACAGCCTATTTTGAGTT 58.950 37.500 12.19 0.00 45.75 3.01
2807 3586 4.099266 TGTGCAAAACAGCCTATTTTGAGT 59.901 37.500 12.19 0.00 45.75 3.41
2808 3587 4.619973 TGTGCAAAACAGCCTATTTTGAG 58.380 39.130 12.19 0.00 45.75 3.02
2809 3588 4.662468 TGTGCAAAACAGCCTATTTTGA 57.338 36.364 12.19 0.00 45.75 2.69
2810 3589 5.236911 ACAATGTGCAAAACAGCCTATTTTG 59.763 36.000 3.83 3.83 45.68 2.44
2811 3590 5.367302 ACAATGTGCAAAACAGCCTATTTT 58.633 33.333 0.00 0.00 43.64 1.82
2812 3591 4.959723 ACAATGTGCAAAACAGCCTATTT 58.040 34.783 0.00 0.00 43.64 1.40
2813 3592 4.281688 AGACAATGTGCAAAACAGCCTATT 59.718 37.500 0.00 0.00 43.64 1.73
2814 3593 3.828451 AGACAATGTGCAAAACAGCCTAT 59.172 39.130 0.00 0.00 43.64 2.57
2815 3594 3.004629 CAGACAATGTGCAAAACAGCCTA 59.995 43.478 0.00 0.00 43.64 3.93
2816 3595 2.034124 AGACAATGTGCAAAACAGCCT 58.966 42.857 0.00 0.00 43.64 4.58
2817 3596 2.129607 CAGACAATGTGCAAAACAGCC 58.870 47.619 0.00 0.00 43.64 4.85
2818 3597 3.082698 TCAGACAATGTGCAAAACAGC 57.917 42.857 0.00 0.00 43.64 4.40
2819 3598 5.521010 ACATTTCAGACAATGTGCAAAACAG 59.479 36.000 0.00 0.00 44.19 3.16
2820 3599 5.417811 ACATTTCAGACAATGTGCAAAACA 58.582 33.333 0.00 0.00 44.19 2.83
2821 3600 5.750067 AGACATTTCAGACAATGTGCAAAAC 59.250 36.000 12.82 2.36 45.55 2.43
2822 3601 5.904941 AGACATTTCAGACAATGTGCAAAA 58.095 33.333 12.82 0.00 45.55 2.44
2823 3602 5.518848 AGACATTTCAGACAATGTGCAAA 57.481 34.783 12.82 0.00 45.55 3.68
2824 3603 5.067544 TGAAGACATTTCAGACAATGTGCAA 59.932 36.000 12.82 0.00 45.55 4.08
2825 3604 4.579753 TGAAGACATTTCAGACAATGTGCA 59.420 37.500 12.82 0.00 45.55 4.57
2826 3605 5.112220 TGAAGACATTTCAGACAATGTGC 57.888 39.130 12.82 7.29 45.55 4.57
2827 3606 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
2829 3608 6.206243 AGACCTTGAAGACATTTCAGACAATG 59.794 38.462 0.00 0.00 39.67 2.82
2830 3609 6.302269 AGACCTTGAAGACATTTCAGACAAT 58.698 36.000 0.00 0.00 0.00 2.71
2831 3610 5.684704 AGACCTTGAAGACATTTCAGACAA 58.315 37.500 0.00 0.00 0.00 3.18
2832 3611 5.296151 AGACCTTGAAGACATTTCAGACA 57.704 39.130 0.00 0.00 0.00 3.41
2833 3612 7.913674 ATAAGACCTTGAAGACATTTCAGAC 57.086 36.000 0.00 0.00 0.00 3.51
2839 3618 9.793259 TCACTTTTATAAGACCTTGAAGACATT 57.207 29.630 0.00 0.00 35.30 2.71
2840 3619 9.793259 TTCACTTTTATAAGACCTTGAAGACAT 57.207 29.630 0.00 0.00 35.30 3.06
2841 3620 9.052759 GTTCACTTTTATAAGACCTTGAAGACA 57.947 33.333 0.00 0.00 35.30 3.41
2842 3621 9.052759 TGTTCACTTTTATAAGACCTTGAAGAC 57.947 33.333 0.00 0.00 35.30 3.01
2843 3622 9.273016 CTGTTCACTTTTATAAGACCTTGAAGA 57.727 33.333 0.00 0.00 35.30 2.87
2844 3623 9.273016 TCTGTTCACTTTTATAAGACCTTGAAG 57.727 33.333 0.00 0.00 35.30 3.02
2845 3624 9.273016 CTCTGTTCACTTTTATAAGACCTTGAA 57.727 33.333 0.00 0.00 35.30 2.69
2846 3625 7.878127 CCTCTGTTCACTTTTATAAGACCTTGA 59.122 37.037 0.00 0.00 35.30 3.02
2847 3626 7.119846 CCCTCTGTTCACTTTTATAAGACCTTG 59.880 40.741 0.00 0.00 35.30 3.61
2848 3627 7.017254 TCCCTCTGTTCACTTTTATAAGACCTT 59.983 37.037 0.00 0.00 35.30 3.50
2849 3628 6.500751 TCCCTCTGTTCACTTTTATAAGACCT 59.499 38.462 0.00 0.00 35.30 3.85
2850 3629 6.708285 TCCCTCTGTTCACTTTTATAAGACC 58.292 40.000 0.00 0.00 35.30 3.85
2851 3630 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
2852 3631 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
2853 3632 9.892130 AATACTCCCTCTGTTCACTTTTATAAG 57.108 33.333 0.00 0.00 37.40 1.73
2860 3639 9.440761 AGAATATAATACTCCCTCTGTTCACTT 57.559 33.333 0.00 0.00 0.00 3.16
2861 3640 9.440761 AAGAATATAATACTCCCTCTGTTCACT 57.559 33.333 0.00 0.00 0.00 3.41
2862 3641 9.699703 GAAGAATATAATACTCCCTCTGTTCAC 57.300 37.037 0.00 0.00 0.00 3.18
2863 3642 9.661954 AGAAGAATATAATACTCCCTCTGTTCA 57.338 33.333 0.00 0.00 0.00 3.18
2864 3643 9.921637 CAGAAGAATATAATACTCCCTCTGTTC 57.078 37.037 0.00 0.00 0.00 3.18
2865 3644 9.440761 ACAGAAGAATATAATACTCCCTCTGTT 57.559 33.333 0.00 0.00 0.00 3.16
2866 3645 9.440761 AACAGAAGAATATAATACTCCCTCTGT 57.559 33.333 0.00 0.00 34.25 3.41
2871 3650 9.930693 CCACTAACAGAAGAATATAATACTCCC 57.069 37.037 0.00 0.00 0.00 4.30
2872 3651 9.930693 CCCACTAACAGAAGAATATAATACTCC 57.069 37.037 0.00 0.00 0.00 3.85
2877 3656 8.921205 ACGTACCCACTAACAGAAGAATATAAT 58.079 33.333 0.00 0.00 0.00 1.28
3569 4356 8.424731 GTTTTAGTTCAAATTAACCTCATTGCG 58.575 33.333 0.00 0.00 0.00 4.85
3688 4639 7.707624 TTCTATGCAATGATGTTCTTTCCTT 57.292 32.000 0.00 0.00 0.00 3.36
3702 4653 6.839124 TGAACTTTCACCATTCTATGCAAT 57.161 33.333 0.00 0.00 31.01 3.56
3720 4672 7.116376 CACTTCACACGTGTAGAAATATGAACT 59.884 37.037 22.90 4.48 33.08 3.01
3749 4701 7.405469 TGCTTTTTAAAGTGCATAATGTGTG 57.595 32.000 11.49 0.00 38.28 3.82
3868 4823 7.557724 TCATCTACACAAATTTATACCCACGA 58.442 34.615 0.00 0.00 0.00 4.35
4117 5072 3.266772 TGACTTACTGGGGCATTCTGATT 59.733 43.478 0.00 0.00 0.00 2.57
4794 5951 1.139058 GCAGATTGTACCTGGGACGAT 59.861 52.381 11.81 11.81 32.51 3.73
4887 6044 8.001881 TGAAGAGGACAGTATATGAGAGTTTC 57.998 38.462 0.00 0.00 0.00 2.78
4967 6124 7.285858 AGCTGGACCTATATAACGGATCTAATC 59.714 40.741 0.00 0.00 0.00 1.75
5248 6406 8.902540 ACAAATCAAGTAGACACTAAATCACA 57.097 30.769 0.00 0.00 33.48 3.58
5379 6539 2.158971 ACTGAAAAACATTGCACCCACC 60.159 45.455 0.00 0.00 0.00 4.61
5600 6779 5.415221 TGTTGGTTAAAAAGCCTTGTCTTG 58.585 37.500 0.00 0.00 0.00 3.02
5694 6875 9.301153 CAAAGCTTTGACCAAACATATTATACC 57.699 33.333 31.24 0.00 40.55 2.73
5697 6878 8.806146 AGACAAAGCTTTGACCAAACATATTAT 58.194 29.630 38.78 16.06 40.55 1.28
5727 6908 4.319190 CCGGTATGCGGTGTAATATGTTTG 60.319 45.833 0.00 0.00 0.00 2.93
5728 6909 3.810941 CCGGTATGCGGTGTAATATGTTT 59.189 43.478 0.00 0.00 0.00 2.83
5729 6910 3.395639 CCGGTATGCGGTGTAATATGTT 58.604 45.455 0.00 0.00 0.00 2.71
5730 6911 2.868839 GCCGGTATGCGGTGTAATATGT 60.869 50.000 1.90 0.00 0.00 2.29
5731 6912 1.730064 GCCGGTATGCGGTGTAATATG 59.270 52.381 1.90 0.00 0.00 1.78
5732 6913 1.345089 TGCCGGTATGCGGTGTAATAT 59.655 47.619 1.90 0.00 0.00 1.28
5733 6914 0.751452 TGCCGGTATGCGGTGTAATA 59.249 50.000 1.90 0.00 0.00 0.98
5734 6915 0.107831 ATGCCGGTATGCGGTGTAAT 59.892 50.000 3.42 0.00 0.00 1.89
5735 6916 0.751452 TATGCCGGTATGCGGTGTAA 59.249 50.000 16.11 0.00 0.00 2.41
5736 6917 0.032403 GTATGCCGGTATGCGGTGTA 59.968 55.000 16.11 0.00 0.00 2.90
5737 6918 1.227438 GTATGCCGGTATGCGGTGT 60.227 57.895 16.11 0.00 0.00 4.16
5738 6919 2.307309 CGTATGCCGGTATGCGGTG 61.307 63.158 29.83 7.29 33.41 4.94
5739 6920 1.454572 TACGTATGCCGGTATGCGGT 61.455 55.000 36.74 26.50 39.90 5.68
5740 6921 1.005294 GTACGTATGCCGGTATGCGG 61.005 60.000 36.74 23.16 39.90 5.69
5741 6922 0.039798 AGTACGTATGCCGGTATGCG 60.040 55.000 33.90 33.90 42.24 4.73
5742 6923 2.995466 TAGTACGTATGCCGGTATGC 57.005 50.000 16.11 13.21 42.24 3.14
5743 6924 5.550232 TGTATAGTACGTATGCCGGTATG 57.450 43.478 16.11 1.44 42.24 2.39
5744 6925 7.770433 TCTTATGTATAGTACGTATGCCGGTAT 59.230 37.037 10.75 10.75 42.24 2.73
5745 6926 7.102993 TCTTATGTATAGTACGTATGCCGGTA 58.897 38.462 1.90 0.00 42.24 4.02
5746 6927 5.939883 TCTTATGTATAGTACGTATGCCGGT 59.060 40.000 1.90 0.00 42.24 5.28
5747 6928 6.426980 TCTTATGTATAGTACGTATGCCGG 57.573 41.667 0.00 0.00 42.24 6.13
5748 6929 7.691158 TGATCTTATGTATAGTACGTATGCCG 58.309 38.462 0.00 0.00 44.03 5.69
5749 6930 8.675504 ACTGATCTTATGTATAGTACGTATGCC 58.324 37.037 0.00 0.00 30.83 4.40
5761 6942 9.339850 AGACTTGTACGTACTGATCTTATGTAT 57.660 33.333 25.12 7.17 0.00 2.29
5762 6943 8.728337 AGACTTGTACGTACTGATCTTATGTA 57.272 34.615 25.12 0.00 0.00 2.29
5763 6944 7.627298 AGACTTGTACGTACTGATCTTATGT 57.373 36.000 25.12 11.67 0.00 2.29
5766 6947 9.265901 GGTATAGACTTGTACGTACTGATCTTA 57.734 37.037 25.12 14.85 0.00 2.10
5767 6948 7.992033 AGGTATAGACTTGTACGTACTGATCTT 59.008 37.037 25.12 15.59 0.00 2.40
5768 6949 7.507829 AGGTATAGACTTGTACGTACTGATCT 58.492 38.462 25.12 22.98 0.00 2.75
5769 6950 7.727331 AGGTATAGACTTGTACGTACTGATC 57.273 40.000 25.12 18.14 0.00 2.92
5770 6951 8.428063 AGTAGGTATAGACTTGTACGTACTGAT 58.572 37.037 25.12 11.04 44.10 2.90
5771 6952 7.786030 AGTAGGTATAGACTTGTACGTACTGA 58.214 38.462 25.12 13.47 44.10 3.41
5772 6953 9.703892 ATAGTAGGTATAGACTTGTACGTACTG 57.296 37.037 25.12 19.22 44.75 2.74
5783 6964 9.657728 ACCTTGCTTTAATAGTAGGTATAGACT 57.342 33.333 0.00 0.00 38.47 3.24
5784 6965 9.694137 CACCTTGCTTTAATAGTAGGTATAGAC 57.306 37.037 0.00 0.00 38.31 2.59
5785 6966 9.650714 TCACCTTGCTTTAATAGTAGGTATAGA 57.349 33.333 0.00 0.00 38.31 1.98
5790 6971 9.780186 GAATATCACCTTGCTTTAATAGTAGGT 57.220 33.333 0.00 0.00 39.87 3.08
5794 6975 9.125026 CCAAGAATATCACCTTGCTTTAATAGT 57.875 33.333 0.00 0.00 38.65 2.12
5795 6976 9.125026 ACCAAGAATATCACCTTGCTTTAATAG 57.875 33.333 0.00 0.00 38.65 1.73
5796 6977 9.474313 AACCAAGAATATCACCTTGCTTTAATA 57.526 29.630 0.00 0.00 38.65 0.98
5797 6978 7.961326 ACCAAGAATATCACCTTGCTTTAAT 57.039 32.000 0.00 0.00 38.65 1.40
5798 6979 7.775053 AACCAAGAATATCACCTTGCTTTAA 57.225 32.000 0.00 0.00 38.65 1.52
5799 6980 7.361713 CGAAACCAAGAATATCACCTTGCTTTA 60.362 37.037 0.00 0.00 38.65 1.85
5800 6981 6.570378 CGAAACCAAGAATATCACCTTGCTTT 60.570 38.462 0.00 0.00 38.65 3.51
5801 6982 5.106157 CGAAACCAAGAATATCACCTTGCTT 60.106 40.000 0.00 0.00 38.65 3.91
5802 6983 4.396166 CGAAACCAAGAATATCACCTTGCT 59.604 41.667 0.00 0.00 38.65 3.91
5803 6984 4.156008 ACGAAACCAAGAATATCACCTTGC 59.844 41.667 0.00 0.00 38.65 4.01
5804 6985 5.163754 GGACGAAACCAAGAATATCACCTTG 60.164 44.000 0.00 0.00 39.43 3.61
5805 6986 4.941873 GGACGAAACCAAGAATATCACCTT 59.058 41.667 0.00 0.00 0.00 3.50
5806 6987 4.514401 GGACGAAACCAAGAATATCACCT 58.486 43.478 0.00 0.00 0.00 4.00
5807 6988 3.626217 GGGACGAAACCAAGAATATCACC 59.374 47.826 0.00 0.00 0.00 4.02
5808 6989 4.877323 GGGACGAAACCAAGAATATCAC 57.123 45.455 0.00 0.00 0.00 3.06
5825 7006 4.813296 AAAAATCATCTAATCGCGGGAC 57.187 40.909 6.13 0.00 0.00 4.46
5844 7025 6.293955 CCTCGCCAGATAGAAAAACTCAAAAA 60.294 38.462 0.00 0.00 0.00 1.94
5845 7026 5.181245 CCTCGCCAGATAGAAAAACTCAAAA 59.819 40.000 0.00 0.00 0.00 2.44
5846 7027 4.695455 CCTCGCCAGATAGAAAAACTCAAA 59.305 41.667 0.00 0.00 0.00 2.69
5847 7028 4.253685 CCTCGCCAGATAGAAAAACTCAA 58.746 43.478 0.00 0.00 0.00 3.02
5848 7029 3.260884 ACCTCGCCAGATAGAAAAACTCA 59.739 43.478 0.00 0.00 0.00 3.41
5849 7030 3.619038 CACCTCGCCAGATAGAAAAACTC 59.381 47.826 0.00 0.00 0.00 3.01
5850 7031 3.600388 CACCTCGCCAGATAGAAAAACT 58.400 45.455 0.00 0.00 0.00 2.66
5851 7032 2.678336 CCACCTCGCCAGATAGAAAAAC 59.322 50.000 0.00 0.00 0.00 2.43
5852 7033 2.304761 ACCACCTCGCCAGATAGAAAAA 59.695 45.455 0.00 0.00 0.00 1.94
5853 7034 1.906574 ACCACCTCGCCAGATAGAAAA 59.093 47.619 0.00 0.00 0.00 2.29
5854 7035 1.568504 ACCACCTCGCCAGATAGAAA 58.431 50.000 0.00 0.00 0.00 2.52
5855 7036 2.029623 GTACCACCTCGCCAGATAGAA 58.970 52.381 0.00 0.00 0.00 2.10
5856 7037 1.214673 AGTACCACCTCGCCAGATAGA 59.785 52.381 0.00 0.00 0.00 1.98
5857 7038 1.693627 AGTACCACCTCGCCAGATAG 58.306 55.000 0.00 0.00 0.00 2.08
5858 7039 3.520691 ATAGTACCACCTCGCCAGATA 57.479 47.619 0.00 0.00 0.00 1.98
5859 7040 2.383442 ATAGTACCACCTCGCCAGAT 57.617 50.000 0.00 0.00 0.00 2.90
5860 7041 2.029623 GAATAGTACCACCTCGCCAGA 58.970 52.381 0.00 0.00 0.00 3.86
5861 7042 1.754803 TGAATAGTACCACCTCGCCAG 59.245 52.381 0.00 0.00 0.00 4.85
5862 7043 1.479323 GTGAATAGTACCACCTCGCCA 59.521 52.381 0.00 0.00 0.00 5.69
5863 7044 1.479323 TGTGAATAGTACCACCTCGCC 59.521 52.381 0.00 0.00 32.61 5.54
5864 7045 2.953466 TGTGAATAGTACCACCTCGC 57.047 50.000 0.00 0.00 32.61 5.03
5865 7046 3.383505 TCCATGTGAATAGTACCACCTCG 59.616 47.826 0.00 0.00 32.61 4.63
5866 7047 5.353394 TTCCATGTGAATAGTACCACCTC 57.647 43.478 0.00 0.00 32.61 3.85
5867 7048 5.975988 ATTCCATGTGAATAGTACCACCT 57.024 39.130 7.42 0.00 41.96 4.00
5868 7049 7.404671 AAAATTCCATGTGAATAGTACCACC 57.595 36.000 9.08 0.00 42.97 4.61
5869 7050 7.759433 CCAAAAATTCCATGTGAATAGTACCAC 59.241 37.037 9.08 0.00 42.97 4.16
5870 7051 7.453126 ACCAAAAATTCCATGTGAATAGTACCA 59.547 33.333 9.08 0.00 42.97 3.25
5871 7052 7.836842 ACCAAAAATTCCATGTGAATAGTACC 58.163 34.615 9.08 0.00 42.97 3.34
5872 7053 7.696453 CGACCAAAAATTCCATGTGAATAGTAC 59.304 37.037 9.08 0.00 42.97 2.73
5873 7054 7.392113 ACGACCAAAAATTCCATGTGAATAGTA 59.608 33.333 9.08 0.00 42.97 1.82
5874 7055 6.208599 ACGACCAAAAATTCCATGTGAATAGT 59.791 34.615 9.08 4.24 42.97 2.12
5875 7056 6.620678 ACGACCAAAAATTCCATGTGAATAG 58.379 36.000 9.08 2.70 42.97 1.73
5876 7057 6.582677 ACGACCAAAAATTCCATGTGAATA 57.417 33.333 9.08 0.00 42.97 1.75
5877 7058 5.467035 ACGACCAAAAATTCCATGTGAAT 57.533 34.783 0.00 4.21 45.75 2.57
5878 7059 4.555708 CGACGACCAAAAATTCCATGTGAA 60.556 41.667 0.00 0.00 37.38 3.18
5879 7060 3.058570 CGACGACCAAAAATTCCATGTGA 60.059 43.478 0.00 0.00 0.00 3.58
5880 7061 3.233578 CGACGACCAAAAATTCCATGTG 58.766 45.455 0.00 0.00 0.00 3.21
5881 7062 2.882137 ACGACGACCAAAAATTCCATGT 59.118 40.909 0.00 0.00 0.00 3.21
5882 7063 3.552604 ACGACGACCAAAAATTCCATG 57.447 42.857 0.00 0.00 0.00 3.66
5883 7064 4.542735 GAAACGACGACCAAAAATTCCAT 58.457 39.130 0.00 0.00 0.00 3.41
5884 7065 3.546417 CGAAACGACGACCAAAAATTCCA 60.546 43.478 0.00 0.00 35.09 3.53
5885 7066 2.968655 CGAAACGACGACCAAAAATTCC 59.031 45.455 0.00 0.00 35.09 3.01
5886 7067 3.416352 CACGAAACGACGACCAAAAATTC 59.584 43.478 0.00 0.00 37.03 2.17
5887 7068 3.356145 CACGAAACGACGACCAAAAATT 58.644 40.909 0.00 0.00 37.03 1.82
5888 7069 2.851764 GCACGAAACGACGACCAAAAAT 60.852 45.455 0.00 0.00 37.03 1.82
5889 7070 1.529418 GCACGAAACGACGACCAAAAA 60.529 47.619 0.00 0.00 37.03 1.94
5890 7071 0.026544 GCACGAAACGACGACCAAAA 59.973 50.000 0.00 0.00 37.03 2.44
5891 7072 1.637402 GCACGAAACGACGACCAAA 59.363 52.632 0.00 0.00 37.03 3.28
5892 7073 2.578679 CGCACGAAACGACGACCAA 61.579 57.895 0.00 0.00 37.03 3.67
5893 7074 3.025743 CGCACGAAACGACGACCA 61.026 61.111 0.00 0.00 37.03 4.02
5894 7075 2.579574 AACGCACGAAACGACGACC 61.580 57.895 0.00 0.00 35.12 4.79
5895 7076 1.434379 CAACGCACGAAACGACGAC 60.434 57.895 0.00 0.00 35.12 4.34
5896 7077 1.533988 CTCAACGCACGAAACGACGA 61.534 55.000 0.00 0.00 35.12 4.20
5897 7078 1.155087 CTCAACGCACGAAACGACG 60.155 57.895 0.00 0.00 36.48 5.12
5898 7079 0.573521 TTCTCAACGCACGAAACGAC 59.426 50.000 0.00 0.00 0.00 4.34
5899 7080 1.279152 TTTCTCAACGCACGAAACGA 58.721 45.000 0.00 0.00 0.00 3.85
5900 7081 1.765750 GTTTTCTCAACGCACGAAACG 59.234 47.619 0.00 0.00 0.00 3.60
5901 7082 2.776330 TGTTTTCTCAACGCACGAAAC 58.224 42.857 0.00 0.00 0.00 2.78
5902 7083 3.684103 ATGTTTTCTCAACGCACGAAA 57.316 38.095 0.00 0.00 0.00 3.46
5903 7084 3.363575 GCTATGTTTTCTCAACGCACGAA 60.364 43.478 0.00 0.00 0.00 3.85
5904 7085 2.156891 GCTATGTTTTCTCAACGCACGA 59.843 45.455 0.00 0.00 0.00 4.35
5905 7086 2.495939 GCTATGTTTTCTCAACGCACG 58.504 47.619 0.00 0.00 0.00 5.34
5906 7087 2.414161 GGGCTATGTTTTCTCAACGCAC 60.414 50.000 0.00 0.00 0.00 5.34
5907 7088 1.810151 GGGCTATGTTTTCTCAACGCA 59.190 47.619 0.00 0.00 0.00 5.24
5908 7089 1.810151 TGGGCTATGTTTTCTCAACGC 59.190 47.619 0.00 0.00 0.00 4.84
5909 7090 4.475944 CTTTGGGCTATGTTTTCTCAACG 58.524 43.478 0.00 0.00 0.00 4.10
5910 7091 4.809673 CCTTTGGGCTATGTTTTCTCAAC 58.190 43.478 0.00 0.00 0.00 3.18
5933 7114 1.740296 CCCTGTTGAGGCGTAACGG 60.740 63.158 8.25 8.25 38.17 4.44
5934 7115 1.005394 ACCCTGTTGAGGCGTAACG 60.005 57.895 0.00 0.00 38.17 3.18
5935 7116 0.953960 CCACCCTGTTGAGGCGTAAC 60.954 60.000 0.80 0.80 38.17 2.50
5936 7117 1.373435 CCACCCTGTTGAGGCGTAA 59.627 57.895 0.00 0.00 38.17 3.18
5937 7118 2.589157 CCCACCCTGTTGAGGCGTA 61.589 63.158 0.00 0.00 38.17 4.42
5938 7119 3.953775 CCCACCCTGTTGAGGCGT 61.954 66.667 0.00 0.00 38.17 5.68
5940 7121 3.513750 AAGCCCACCCTGTTGAGGC 62.514 63.158 0.00 0.00 44.20 4.70
5941 7122 1.303643 GAAGCCCACCCTGTTGAGG 60.304 63.158 0.00 0.00 39.42 3.86
5942 7123 0.607489 CTGAAGCCCACCCTGTTGAG 60.607 60.000 0.00 0.00 0.00 3.02
5943 7124 1.455849 CTGAAGCCCACCCTGTTGA 59.544 57.895 0.00 0.00 0.00 3.18
5944 7125 2.270986 GCTGAAGCCCACCCTGTTG 61.271 63.158 0.00 0.00 34.31 3.33
5945 7126 2.116125 GCTGAAGCCCACCCTGTT 59.884 61.111 0.00 0.00 34.31 3.16
5946 7127 4.335647 CGCTGAAGCCCACCCTGT 62.336 66.667 0.00 0.00 37.91 4.00
5947 7128 3.850098 AACGCTGAAGCCCACCCTG 62.850 63.158 0.00 0.00 37.91 4.45
5948 7129 3.553095 GAACGCTGAAGCCCACCCT 62.553 63.158 0.00 0.00 37.91 4.34
5949 7130 3.056328 GAACGCTGAAGCCCACCC 61.056 66.667 0.00 0.00 37.91 4.61
5950 7131 3.056328 GGAACGCTGAAGCCCACC 61.056 66.667 0.00 0.00 37.91 4.61
5951 7132 2.032681 AGGAACGCTGAAGCCCAC 59.967 61.111 0.00 0.00 37.91 4.61
5952 7133 2.217038 AGAGGAACGCTGAAGCCCA 61.217 57.895 0.00 0.00 36.88 5.36
5953 7134 2.665603 AGAGGAACGCTGAAGCCC 59.334 61.111 0.00 0.00 36.88 5.19
5960 7141 2.586792 GCCCATCAGAGGAACGCT 59.413 61.111 0.00 0.00 40.82 5.07
5961 7142 2.514824 GGCCCATCAGAGGAACGC 60.515 66.667 0.00 0.00 0.00 4.84
5962 7143 1.153289 CAGGCCCATCAGAGGAACG 60.153 63.158 0.00 0.00 0.00 3.95
5963 7144 1.452833 GCAGGCCCATCAGAGGAAC 60.453 63.158 0.00 0.00 0.00 3.62
5964 7145 1.617536 AGCAGGCCCATCAGAGGAA 60.618 57.895 0.00 0.00 0.00 3.36
5965 7146 2.041762 AGCAGGCCCATCAGAGGA 59.958 61.111 0.00 0.00 0.00 3.71
5966 7147 2.509916 GAGCAGGCCCATCAGAGG 59.490 66.667 0.00 0.00 0.00 3.69
5967 7148 0.762082 TAGGAGCAGGCCCATCAGAG 60.762 60.000 0.00 0.00 0.00 3.35
5968 7149 1.050988 GTAGGAGCAGGCCCATCAGA 61.051 60.000 0.00 0.00 0.00 3.27
5969 7150 1.449353 GTAGGAGCAGGCCCATCAG 59.551 63.158 0.00 0.00 0.00 2.90
5970 7151 2.072487 GGTAGGAGCAGGCCCATCA 61.072 63.158 0.00 0.00 0.00 3.07
5971 7152 2.832498 GGTAGGAGCAGGCCCATC 59.168 66.667 0.00 0.00 0.00 3.51
5972 7153 3.164269 CGGTAGGAGCAGGCCCAT 61.164 66.667 0.00 0.00 0.00 4.00
5976 7157 2.432300 TAAGGCGGTAGGAGCAGGC 61.432 63.158 0.00 0.00 36.08 4.85
5977 7158 1.442148 GTAAGGCGGTAGGAGCAGG 59.558 63.158 0.00 0.00 36.08 4.85
5978 7159 1.065928 CGTAAGGCGGTAGGAGCAG 59.934 63.158 0.00 0.00 36.85 4.24
5979 7160 0.966875 TTCGTAAGGCGGTAGGAGCA 60.967 55.000 0.00 0.00 41.72 4.26
5980 7161 0.174162 TTTCGTAAGGCGGTAGGAGC 59.826 55.000 0.00 0.00 41.72 4.70
5981 7162 2.660189 TTTTCGTAAGGCGGTAGGAG 57.340 50.000 0.00 0.00 41.72 3.69
6012 7193 9.616634 GTTCGACTCATAATTGGAACGTATATA 57.383 33.333 0.00 0.00 0.00 0.86
6013 7194 8.358148 AGTTCGACTCATAATTGGAACGTATAT 58.642 33.333 0.00 0.00 38.90 0.86
6014 7195 7.709947 AGTTCGACTCATAATTGGAACGTATA 58.290 34.615 0.00 0.00 38.90 1.47
6015 7196 6.570692 AGTTCGACTCATAATTGGAACGTAT 58.429 36.000 0.00 0.00 38.90 3.06
6016 7197 5.957798 AGTTCGACTCATAATTGGAACGTA 58.042 37.500 0.00 0.00 38.90 3.57
6017 7198 4.817517 AGTTCGACTCATAATTGGAACGT 58.182 39.130 0.00 0.00 38.90 3.99
6018 7199 4.267928 GGAGTTCGACTCATAATTGGAACG 59.732 45.833 14.26 0.00 46.79 3.95
6019 7200 4.571176 GGGAGTTCGACTCATAATTGGAAC 59.429 45.833 14.26 0.00 46.79 3.62
6020 7201 4.224147 TGGGAGTTCGACTCATAATTGGAA 59.776 41.667 14.26 0.00 46.79 3.53
6021 7202 3.772572 TGGGAGTTCGACTCATAATTGGA 59.227 43.478 14.26 0.00 46.79 3.53
6022 7203 4.137116 TGGGAGTTCGACTCATAATTGG 57.863 45.455 14.26 0.00 46.79 3.16
6023 7204 4.332819 GGTTGGGAGTTCGACTCATAATTG 59.667 45.833 14.26 0.00 46.79 2.32
6024 7205 4.225267 AGGTTGGGAGTTCGACTCATAATT 59.775 41.667 14.26 0.00 46.79 1.40
6025 7206 3.775316 AGGTTGGGAGTTCGACTCATAAT 59.225 43.478 14.26 0.00 46.79 1.28
6026 7207 3.170717 AGGTTGGGAGTTCGACTCATAA 58.829 45.455 14.26 7.68 46.79 1.90
6027 7208 2.758979 GAGGTTGGGAGTTCGACTCATA 59.241 50.000 14.26 3.19 46.79 2.15
6028 7209 1.550976 GAGGTTGGGAGTTCGACTCAT 59.449 52.381 14.26 0.00 46.79 2.90
6029 7210 0.966920 GAGGTTGGGAGTTCGACTCA 59.033 55.000 14.26 0.00 46.79 3.41
6030 7211 1.258676 AGAGGTTGGGAGTTCGACTC 58.741 55.000 6.50 6.50 44.32 3.36
6031 7212 2.169330 GTAGAGGTTGGGAGTTCGACT 58.831 52.381 0.00 0.00 0.00 4.18
6032 7213 2.169330 AGTAGAGGTTGGGAGTTCGAC 58.831 52.381 0.00 0.00 0.00 4.20
6033 7214 2.599408 AGTAGAGGTTGGGAGTTCGA 57.401 50.000 0.00 0.00 0.00 3.71
6034 7215 2.561419 TGAAGTAGAGGTTGGGAGTTCG 59.439 50.000 0.00 0.00 0.00 3.95
6035 7216 3.579151 ACTGAAGTAGAGGTTGGGAGTTC 59.421 47.826 0.00 0.00 0.00 3.01
6036 7217 3.579151 GACTGAAGTAGAGGTTGGGAGTT 59.421 47.826 0.00 0.00 0.00 3.01
6037 7218 3.166679 GACTGAAGTAGAGGTTGGGAGT 58.833 50.000 0.00 0.00 0.00 3.85
6038 7219 3.436243 AGACTGAAGTAGAGGTTGGGAG 58.564 50.000 0.00 0.00 0.00 4.30
6039 7220 3.544698 AGACTGAAGTAGAGGTTGGGA 57.455 47.619 0.00 0.00 0.00 4.37
6040 7221 4.087182 TGTAGACTGAAGTAGAGGTTGGG 58.913 47.826 0.00 0.00 0.00 4.12
6041 7222 5.923733 ATGTAGACTGAAGTAGAGGTTGG 57.076 43.478 0.00 0.00 0.00 3.77
6042 7223 6.603997 ACCTATGTAGACTGAAGTAGAGGTTG 59.396 42.308 0.00 0.00 29.24 3.77
6043 7224 6.603997 CACCTATGTAGACTGAAGTAGAGGTT 59.396 42.308 0.00 0.00 31.23 3.50
6044 7225 6.123651 CACCTATGTAGACTGAAGTAGAGGT 58.876 44.000 0.00 0.00 33.89 3.85
6045 7226 5.009210 GCACCTATGTAGACTGAAGTAGAGG 59.991 48.000 0.00 0.00 0.00 3.69
6046 7227 5.825679 AGCACCTATGTAGACTGAAGTAGAG 59.174 44.000 0.00 0.00 0.00 2.43
6047 7228 5.590663 CAGCACCTATGTAGACTGAAGTAGA 59.409 44.000 0.00 0.00 0.00 2.59
6048 7229 5.221145 CCAGCACCTATGTAGACTGAAGTAG 60.221 48.000 0.00 0.00 0.00 2.57
6049 7230 4.645136 CCAGCACCTATGTAGACTGAAGTA 59.355 45.833 0.00 0.00 0.00 2.24
6050 7231 3.449018 CCAGCACCTATGTAGACTGAAGT 59.551 47.826 0.00 0.00 0.00 3.01
6051 7232 3.739519 GCCAGCACCTATGTAGACTGAAG 60.740 52.174 0.00 0.00 0.00 3.02
6052 7233 2.168521 GCCAGCACCTATGTAGACTGAA 59.831 50.000 0.00 0.00 0.00 3.02
6053 7234 1.757118 GCCAGCACCTATGTAGACTGA 59.243 52.381 0.00 0.00 0.00 3.41
6054 7235 1.202580 GGCCAGCACCTATGTAGACTG 60.203 57.143 0.00 0.00 0.00 3.51
6055 7236 1.123928 GGCCAGCACCTATGTAGACT 58.876 55.000 0.00 0.00 0.00 3.24
6056 7237 0.830648 TGGCCAGCACCTATGTAGAC 59.169 55.000 0.00 0.00 0.00 2.59
6057 7238 1.123077 CTGGCCAGCACCTATGTAGA 58.877 55.000 22.33 0.00 0.00 2.59
6058 7239 3.694364 CTGGCCAGCACCTATGTAG 57.306 57.895 22.33 0.00 0.00 2.74
6069 7250 4.162690 GGTAGGTCGGCTGGCCAG 62.163 72.222 29.34 29.34 35.37 4.85
6070 7251 4.715130 AGGTAGGTCGGCTGGCCA 62.715 66.667 20.68 4.71 35.37 5.36
6071 7252 3.387225 GAAGGTAGGTCGGCTGGCC 62.387 68.421 8.59 8.59 0.00 5.36
6072 7253 2.187163 GAAGGTAGGTCGGCTGGC 59.813 66.667 0.00 0.00 0.00 4.85
6073 7254 1.517832 CTGAAGGTAGGTCGGCTGG 59.482 63.158 0.00 0.00 0.00 4.85
6074 7255 1.153549 GCTGAAGGTAGGTCGGCTG 60.154 63.158 0.00 0.00 42.94 4.85
6075 7256 0.978146 ATGCTGAAGGTAGGTCGGCT 60.978 55.000 6.77 0.00 45.84 5.52
6076 7257 0.107654 AATGCTGAAGGTAGGTCGGC 60.108 55.000 0.00 0.00 45.86 5.54
6077 7258 1.802880 CGAATGCTGAAGGTAGGTCGG 60.803 57.143 0.00 0.00 0.00 4.79
6078 7259 1.560923 CGAATGCTGAAGGTAGGTCG 58.439 55.000 0.00 0.00 0.00 4.79
6079 7260 1.207329 ACCGAATGCTGAAGGTAGGTC 59.793 52.381 0.00 0.00 34.83 3.85
6080 7261 1.276622 ACCGAATGCTGAAGGTAGGT 58.723 50.000 0.00 0.00 34.83 3.08
6081 7262 3.536956 TTACCGAATGCTGAAGGTAGG 57.463 47.619 0.00 0.00 39.97 3.18
6082 7263 5.235186 CAGATTTACCGAATGCTGAAGGTAG 59.765 44.000 0.00 0.00 39.97 3.18
6083 7264 5.116180 CAGATTTACCGAATGCTGAAGGTA 58.884 41.667 0.00 0.00 38.12 3.08
6084 7265 3.941483 CAGATTTACCGAATGCTGAAGGT 59.059 43.478 0.00 0.76 40.52 3.50
6085 7266 3.941483 ACAGATTTACCGAATGCTGAAGG 59.059 43.478 0.00 0.00 32.23 3.46
6086 7267 4.631377 TCACAGATTTACCGAATGCTGAAG 59.369 41.667 0.00 0.00 32.23 3.02
6087 7268 4.574892 TCACAGATTTACCGAATGCTGAA 58.425 39.130 0.00 0.00 32.23 3.02
6088 7269 4.200838 TCACAGATTTACCGAATGCTGA 57.799 40.909 0.00 0.00 32.23 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.