Multiple sequence alignment - TraesCS1A01G213000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G213000 chr1A 100.000 5675 0 0 1 5675 376506874 376501200 0.000000e+00 10480.0
1 TraesCS1A01G213000 chr1A 91.579 285 20 3 5138 5422 84109910 84110190 1.920000e-104 390.0
2 TraesCS1A01G213000 chr1D 96.140 3342 70 18 1669 4958 301632413 301629079 0.000000e+00 5402.0
3 TraesCS1A01G213000 chr1D 92.857 966 43 7 724 1664 301633426 301632462 0.000000e+00 1378.0
4 TraesCS1A01G213000 chr1D 89.382 744 27 21 1 725 301634162 301633452 0.000000e+00 889.0
5 TraesCS1A01G213000 chr1D 92.453 265 12 5 5418 5675 22848928 22849191 6.940000e-99 372.0
6 TraesCS1A01G213000 chr1D 90.391 281 23 4 2871 3149 120586919 120586641 3.230000e-97 366.0
7 TraesCS1A01G213000 chr1B 94.466 2024 75 17 3142 5139 407297954 407295942 0.000000e+00 3083.0
8 TraesCS1A01G213000 chr1B 94.159 1849 71 9 723 2547 407299782 407297947 0.000000e+00 2782.0
9 TraesCS1A01G213000 chr1B 87.788 737 28 28 1 725 407300493 407299807 0.000000e+00 806.0
10 TraesCS1A01G213000 chr5A 86.232 552 38 19 2629 3145 443723114 443723662 1.070000e-156 564.0
11 TraesCS1A01G213000 chr5A 91.727 278 21 2 5146 5422 262610497 262610773 8.920000e-103 385.0
12 TraesCS1A01G213000 chr5A 91.473 258 18 3 5421 5675 441672621 441672877 9.050000e-93 351.0
13 TraesCS1A01G213000 chr5A 90.299 268 20 5 5412 5675 11751291 11751026 4.210000e-91 346.0
14 TraesCS1A01G213000 chr3A 92.771 332 22 2 2811 3141 566885432 566885762 3.980000e-131 479.0
15 TraesCS1A01G213000 chr3A 91.103 281 23 2 5146 5425 408334072 408333793 4.150000e-101 379.0
16 TraesCS1A01G213000 chr3A 89.796 294 28 2 5134 5425 686541313 686541020 5.370000e-100 375.0
17 TraesCS1A01G213000 chr3A 92.248 258 16 3 5421 5675 650433886 650433630 4.180000e-96 363.0
18 TraesCS1A01G213000 chr3A 92.248 258 16 3 5418 5672 718843487 718843743 4.180000e-96 363.0
19 TraesCS1A01G213000 chr3D 92.515 334 20 3 2809 3141 422525710 422525381 1.850000e-129 473.0
20 TraesCS1A01G213000 chr3D 97.500 40 0 1 2596 2635 603941506 603941468 3.670000e-07 67.6
21 TraesCS1A01G213000 chr3B 92.260 323 23 2 2820 3141 550649744 550649423 1.860000e-124 457.0
22 TraesCS1A01G213000 chr3B 100.000 29 0 0 5085 5113 8848394 8848366 3.000000e-03 54.7
23 TraesCS1A01G213000 chr5D 89.213 343 26 6 2806 3141 182919965 182920303 8.790000e-113 418.0
24 TraesCS1A01G213000 chr4A 91.930 285 23 0 5141 5425 503419515 503419231 3.190000e-107 399.0
25 TraesCS1A01G213000 chr4A 91.786 280 23 0 5146 5425 135320332 135320053 1.920000e-104 390.0
26 TraesCS1A01G213000 chr4A 91.727 278 23 0 5145 5422 29461320 29461597 2.480000e-103 387.0
27 TraesCS1A01G213000 chr4A 92.279 272 19 2 5155 5425 511546939 511546669 8.920000e-103 385.0
28 TraesCS1A01G213000 chr4A 91.051 257 18 3 5421 5675 567679079 567679332 5.440000e-90 342.0
29 TraesCS1A01G213000 chrUn 92.143 280 22 0 5143 5422 82563474 82563753 4.120000e-106 396.0
30 TraesCS1A01G213000 chr2A 88.024 334 31 5 2809 3141 174429749 174429424 2.480000e-103 387.0
31 TraesCS1A01G213000 chr2A 93.798 258 11 4 5421 5675 522247620 522247365 3.210000e-102 383.0
32 TraesCS1A01G213000 chr2A 81.221 213 13 9 2548 2734 174429969 174429758 4.580000e-31 147.0
33 TraesCS1A01G213000 chr5B 92.490 253 14 4 5427 5675 270325008 270324757 1.940000e-94 357.0
34 TraesCS1A01G213000 chr5B 91.339 254 16 5 5427 5675 357159260 357159512 5.440000e-90 342.0
35 TraesCS1A01G213000 chr5B 86.378 323 28 9 2806 3115 182465549 182465868 7.040000e-89 339.0
36 TraesCS1A01G213000 chr2D 85.799 338 36 9 2809 3141 259789280 259789610 1.170000e-91 348.0
37 TraesCS1A01G213000 chr6B 79.904 209 20 6 2546 2734 342955960 342956166 3.570000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G213000 chr1A 376501200 376506874 5674 True 10480.000000 10480 100.000000 1 5675 1 chr1A.!!$R1 5674
1 TraesCS1A01G213000 chr1D 301629079 301634162 5083 True 2556.333333 5402 92.793000 1 4958 3 chr1D.!!$R2 4957
2 TraesCS1A01G213000 chr1B 407295942 407300493 4551 True 2223.666667 3083 92.137667 1 5139 3 chr1B.!!$R1 5138
3 TraesCS1A01G213000 chr5A 443723114 443723662 548 False 564.000000 564 86.232000 2629 3145 1 chr5A.!!$F3 516
4 TraesCS1A01G213000 chr2A 174429424 174429969 545 True 267.000000 387 84.622500 2548 3141 2 chr2A.!!$R2 593

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 307 0.036105 TAGTGCTGCTCCACCATGTG 60.036 55.000 0.0 0.00 36.38 3.21 F
451 455 0.250295 CCGTTTCCTGTCTTGCTGGA 60.250 55.000 0.0 0.00 42.46 3.86 F
569 573 0.321346 TGATCTGTTCCAGCTTGCGA 59.679 50.000 0.0 0.00 0.00 5.10 F
1983 2114 0.390492 TGTCTCAGAGGTGTGCACAG 59.610 55.000 22.4 8.38 0.00 3.66 F
2883 3071 2.288702 TGCTGCTGTGTTGTTGTTGTTT 60.289 40.909 0.0 0.00 0.00 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2102 1.002430 TCAGGATTCTGTGCACACCTC 59.998 52.381 20.67 14.63 41.59 3.85 R
2340 2472 1.271597 ACATGTGGGAAGGAGTTGCTC 60.272 52.381 0.00 0.00 0.00 4.26 R
2362 2494 7.714377 CACTCATGACAGCTATCTAAGGAAATT 59.286 37.037 0.00 0.00 0.00 1.82 R
3072 3270 0.107848 GGGATTGACCGGTGAATCGT 60.108 55.000 31.74 9.27 40.11 3.73 R
4687 4891 0.179145 CTCTCGTGATAAACCGGCGT 60.179 55.000 6.01 0.00 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
297 301 0.107945 CTTCCCTAGTGCTGCTCCAC 60.108 60.000 0.00 0.00 35.98 4.02
298 302 1.553690 TTCCCTAGTGCTGCTCCACC 61.554 60.000 0.00 0.00 36.38 4.61
299 303 2.293318 CCCTAGTGCTGCTCCACCA 61.293 63.158 0.00 0.00 36.38 4.17
300 304 1.630126 CCCTAGTGCTGCTCCACCAT 61.630 60.000 0.00 0.00 36.38 3.55
301 305 0.463295 CCTAGTGCTGCTCCACCATG 60.463 60.000 0.00 0.00 36.38 3.66
302 306 0.251354 CTAGTGCTGCTCCACCATGT 59.749 55.000 0.00 0.00 36.38 3.21
303 307 0.036105 TAGTGCTGCTCCACCATGTG 60.036 55.000 0.00 0.00 36.38 3.21
304 308 2.674033 TGCTGCTCCACCATGTGC 60.674 61.111 0.00 0.00 31.34 4.57
306 310 3.807538 CTGCTCCACCATGTGCGC 61.808 66.667 0.00 0.00 31.34 6.09
310 314 4.758251 TCCACCATGTGCGCCGAG 62.758 66.667 4.18 0.00 31.34 4.63
312 316 2.125713 CACCATGTGCGCCGAGTA 60.126 61.111 4.18 0.00 0.00 2.59
313 317 2.167219 CACCATGTGCGCCGAGTAG 61.167 63.158 4.18 0.00 0.00 2.57
319 323 1.241990 TGTGCGCCGAGTAGAGACTT 61.242 55.000 4.18 0.00 35.45 3.01
321 325 1.874466 GCGCCGAGTAGAGACTTGC 60.874 63.158 0.00 0.00 35.45 4.01
324 328 0.533032 GCCGAGTAGAGACTTGCCTT 59.467 55.000 0.00 0.00 35.45 4.35
409 413 2.668279 GCAGTGTTCGGCGATTTTGATT 60.668 45.455 11.76 0.00 0.00 2.57
451 455 0.250295 CCGTTTCCTGTCTTGCTGGA 60.250 55.000 0.00 0.00 42.46 3.86
471 475 6.018016 GCTGGAATTTGTTTGTTTGTGCTTAT 60.018 34.615 0.00 0.00 0.00 1.73
473 477 8.948631 TGGAATTTGTTTGTTTGTGCTTATTA 57.051 26.923 0.00 0.00 0.00 0.98
517 521 2.298163 ACTTCGTTAGTGACCGATGGTT 59.702 45.455 0.00 0.00 35.25 3.67
546 550 2.091112 CGCAGTGCTTGAGACTCCG 61.091 63.158 14.33 0.00 0.00 4.63
569 573 0.321346 TGATCTGTTCCAGCTTGCGA 59.679 50.000 0.00 0.00 0.00 5.10
584 588 4.344474 CGATAGCCTCGCCCCGTC 62.344 72.222 0.00 0.00 41.14 4.79
585 589 3.224324 GATAGCCTCGCCCCGTCA 61.224 66.667 0.00 0.00 0.00 4.35
586 590 3.501458 GATAGCCTCGCCCCGTCAC 62.501 68.421 0.00 0.00 0.00 3.67
733 780 6.295123 GCTGATGATTATTGGAGGCAATTCAT 60.295 38.462 0.00 0.00 29.61 2.57
834 881 2.871182 TGCTAAACGCGATGAGAGAT 57.129 45.000 15.93 0.00 43.27 2.75
840 887 2.141535 ACGCGATGAGAGATTTAGCC 57.858 50.000 15.93 0.00 0.00 3.93
841 888 1.409064 ACGCGATGAGAGATTTAGCCA 59.591 47.619 15.93 0.00 0.00 4.75
845 892 3.434984 GCGATGAGAGATTTAGCCATTCC 59.565 47.826 0.00 0.00 0.00 3.01
851 898 5.415701 TGAGAGATTTAGCCATTCCAAACAC 59.584 40.000 0.00 0.00 0.00 3.32
863 910 1.600013 TCCAAACACGTGGTTCATTCG 59.400 47.619 17.72 4.60 39.29 3.34
869 916 0.391597 ACGTGGTTCATTCGGTGACT 59.608 50.000 0.00 0.00 36.32 3.41
941 988 2.174363 TCACAAGCAGTGGATGTGAG 57.826 50.000 9.11 0.00 46.11 3.51
1111 1158 1.270094 TGGTCAAGGAGTACAACGCAG 60.270 52.381 0.00 0.00 0.00 5.18
1128 1175 1.198637 GCAGAGAACACTGATGGCAAC 59.801 52.381 0.00 0.00 39.94 4.17
1167 1214 2.735134 GGACACAAAGGTATGTCACGAC 59.265 50.000 6.70 0.00 45.83 4.34
1169 1216 3.390135 ACACAAAGGTATGTCACGACTG 58.610 45.455 0.00 0.00 0.00 3.51
1278 1325 0.815095 CTGAGCCAATCATGCTTGCA 59.185 50.000 3.70 0.00 39.69 4.08
1510 1572 4.643334 ACAACTGTTCCTGGTTAAAACTCC 59.357 41.667 0.00 0.00 0.00 3.85
1639 1726 2.943033 GTGTTGCTTTGTAGAGTGTGGT 59.057 45.455 0.00 0.00 0.00 4.16
1640 1727 3.377172 GTGTTGCTTTGTAGAGTGTGGTT 59.623 43.478 0.00 0.00 0.00 3.67
1684 1815 5.551233 TGTGAATGAGAGGGAGTTTTACTG 58.449 41.667 0.00 0.00 0.00 2.74
1715 1846 7.220030 TCTATCAGATTATTTGGCTGTCCTTC 58.780 38.462 0.00 0.00 0.00 3.46
1825 1956 1.532868 GATGTCGCTTGCTGTGAAGTT 59.467 47.619 0.00 0.00 36.89 2.66
1957 2088 9.154632 AGGTTAATTGGTTTCTTCCTTAACATT 57.845 29.630 0.00 0.00 33.55 2.71
1971 2102 9.403110 CTTCCTTAACATTTTCAATTGTCTCAG 57.597 33.333 5.13 0.00 0.00 3.35
1983 2114 0.390492 TGTCTCAGAGGTGTGCACAG 59.610 55.000 22.40 8.38 0.00 3.66
2044 2175 5.893824 GGATTGGGAAGATATCAAGTTTGGT 59.106 40.000 5.32 0.00 0.00 3.67
2047 2178 5.253330 TGGGAAGATATCAAGTTTGGTGTC 58.747 41.667 5.32 0.00 30.50 3.67
2340 2472 6.429624 TCAGTTCATTCATGTCGAAACAAAG 58.570 36.000 0.00 0.00 39.30 2.77
2362 2494 2.375174 AGCAACTCCTTCCCACATGTAA 59.625 45.455 0.00 0.00 0.00 2.41
2500 2640 3.419943 TGCATGCAGGTCTTATGTTTGA 58.580 40.909 18.46 0.00 0.00 2.69
2677 2842 3.950397 TCGGTTGTCAGGCTGAATTATT 58.050 40.909 20.62 0.00 0.00 1.40
2711 2880 6.293626 CGATTAACTGAGATATTTTGGCCCAG 60.294 42.308 0.00 0.00 0.00 4.45
2843 3031 4.945543 TGTGCTGCTCTCATTTGATGTTAT 59.054 37.500 0.00 0.00 0.00 1.89
2851 3039 9.481340 TGCTCTCATTTGATGTTATATAGTGAC 57.519 33.333 0.00 0.00 0.00 3.67
2883 3071 2.288702 TGCTGCTGTGTTGTTGTTGTTT 60.289 40.909 0.00 0.00 0.00 2.83
3072 3270 9.715121 GGTTACCGATATATTCAGTTAAATGGA 57.285 33.333 2.65 0.00 0.00 3.41
3083 3281 3.063452 CAGTTAAATGGACGATTCACCGG 59.937 47.826 0.00 0.00 0.00 5.28
3085 3283 1.734163 AAATGGACGATTCACCGGTC 58.266 50.000 2.59 0.00 0.00 4.79
3259 3458 7.844493 TCCTTTACTACAGGTGAGACTAAAA 57.156 36.000 0.00 0.00 32.59 1.52
3325 3524 9.014297 TGGAGTAAAGAAAAAGATTCATCCTTC 57.986 33.333 0.00 0.00 0.00 3.46
3745 3949 2.557869 AGGTACCCATTGAAGGCAGTA 58.442 47.619 8.74 0.00 0.00 2.74
3797 4001 1.633774 ATCCAGCCTATACGACCCAG 58.366 55.000 0.00 0.00 0.00 4.45
3951 4155 6.600032 ACCTTTTGTTTTAACCCATGTTTTCC 59.400 34.615 0.00 0.00 35.87 3.13
4464 4668 9.918630 CAAAGTCAAACCTTTTATCATCATTCT 57.081 29.630 0.00 0.00 32.42 2.40
4632 4836 0.307453 CGCAGTCGATCTGGAGAGAG 59.693 60.000 14.19 0.00 43.78 3.20
4668 4872 5.063204 CACATACAAGTGAGGAAAGTCCAA 58.937 41.667 0.00 0.00 42.05 3.53
4694 4898 3.049674 CAGAACATGCACGCCGGT 61.050 61.111 1.90 0.00 0.00 5.28
4707 4925 0.870307 CGCCGGTTTATCACGAGAGG 60.870 60.000 1.90 0.00 0.00 3.69
4720 4938 4.956085 TCACGAGAGGAAAGTTTTGATGA 58.044 39.130 0.00 0.00 0.00 2.92
4732 4950 1.532523 TTTGATGACGCATCCAAGCA 58.467 45.000 14.48 0.00 39.87 3.91
4753 4971 6.266323 AGCATGTTACTATTCTACTGTGTCG 58.734 40.000 0.00 0.00 0.00 4.35
4792 5010 6.755141 TCCGAGTAATTCTTTTATGGAGAACG 59.245 38.462 0.00 0.00 36.08 3.95
4843 5061 7.803189 CGCTGAATTTACTTGTAAACACTGAAT 59.197 33.333 7.95 0.00 0.00 2.57
4938 5159 6.329496 CAGTTGAAAAGAAGGCAACAAAGTA 58.671 36.000 0.00 0.00 43.15 2.24
4971 5192 8.905660 TGGACTATCAAGATACTACTAGTGAC 57.094 38.462 5.39 0.00 0.00 3.67
4986 5207 8.736244 ACTACTAGTGACATGTGTTTTGTTTTT 58.264 29.630 1.15 0.00 0.00 1.94
5027 5251 4.524328 AGCTTAAGGTTCATTTGGAGTTGG 59.476 41.667 0.12 0.00 0.00 3.77
5043 5267 0.756294 TTGGCTTCTCACCGAGACAA 59.244 50.000 0.00 0.00 38.51 3.18
5064 5288 0.105760 TGCCCATTGTTGGAACCAGT 60.106 50.000 0.00 0.00 46.92 4.00
5078 5306 0.916086 ACCAGTTATCATTGGGCGGA 59.084 50.000 0.00 0.00 38.82 5.54
5113 5341 9.709495 ATGCTAATTGAAATAATGTTGTTGTGT 57.291 25.926 0.00 0.00 0.00 3.72
5126 5354 7.928908 ATGTTGTTGTGTAGTAAATGCTTTG 57.071 32.000 0.00 0.00 0.00 2.77
5139 5367 3.523606 ATGCTTTGTGTTCTTGTGCAA 57.476 38.095 0.00 0.00 32.66 4.08
5140 5368 3.523606 TGCTTTGTGTTCTTGTGCAAT 57.476 38.095 0.00 0.00 0.00 3.56
5141 5369 3.859443 TGCTTTGTGTTCTTGTGCAATT 58.141 36.364 0.00 0.00 0.00 2.32
5142 5370 4.252073 TGCTTTGTGTTCTTGTGCAATTT 58.748 34.783 0.00 0.00 0.00 1.82
5143 5371 5.414360 TGCTTTGTGTTCTTGTGCAATTTA 58.586 33.333 0.00 0.00 0.00 1.40
5144 5372 5.519566 TGCTTTGTGTTCTTGTGCAATTTAG 59.480 36.000 0.00 0.00 0.00 1.85
5145 5373 5.519927 GCTTTGTGTTCTTGTGCAATTTAGT 59.480 36.000 0.00 0.00 0.00 2.24
5146 5374 6.695278 GCTTTGTGTTCTTGTGCAATTTAGTA 59.305 34.615 0.00 0.00 0.00 1.82
5147 5375 7.305993 GCTTTGTGTTCTTGTGCAATTTAGTAC 60.306 37.037 0.00 0.00 0.00 2.73
5148 5376 6.935741 TGTGTTCTTGTGCAATTTAGTACT 57.064 33.333 0.00 0.00 0.00 2.73
5149 5377 6.954944 TGTGTTCTTGTGCAATTTAGTACTC 58.045 36.000 0.00 0.00 0.00 2.59
5150 5378 6.017440 TGTGTTCTTGTGCAATTTAGTACTCC 60.017 38.462 0.00 0.00 0.00 3.85
5151 5379 5.472137 TGTTCTTGTGCAATTTAGTACTCCC 59.528 40.000 0.00 0.00 0.00 4.30
5152 5380 5.499004 TCTTGTGCAATTTAGTACTCCCT 57.501 39.130 0.00 0.00 0.00 4.20
5153 5381 5.488341 TCTTGTGCAATTTAGTACTCCCTC 58.512 41.667 0.00 0.00 0.00 4.30
5154 5382 5.248477 TCTTGTGCAATTTAGTACTCCCTCT 59.752 40.000 0.00 0.00 0.00 3.69
5155 5383 4.832248 TGTGCAATTTAGTACTCCCTCTG 58.168 43.478 0.00 0.00 0.00 3.35
5156 5384 4.286032 TGTGCAATTTAGTACTCCCTCTGT 59.714 41.667 0.00 0.00 0.00 3.41
5157 5385 4.870991 GTGCAATTTAGTACTCCCTCTGTC 59.129 45.833 0.00 0.00 0.00 3.51
5158 5386 4.777896 TGCAATTTAGTACTCCCTCTGTCT 59.222 41.667 0.00 0.00 0.00 3.41
5159 5387 5.955959 TGCAATTTAGTACTCCCTCTGTCTA 59.044 40.000 0.00 0.00 0.00 2.59
5160 5388 6.096987 TGCAATTTAGTACTCCCTCTGTCTAG 59.903 42.308 0.00 0.00 0.00 2.43
5161 5389 6.461788 GCAATTTAGTACTCCCTCTGTCTAGG 60.462 46.154 0.00 0.00 36.30 3.02
5162 5390 5.793034 TTTAGTACTCCCTCTGTCTAGGT 57.207 43.478 0.00 0.00 34.56 3.08
5163 5391 5.793034 TTAGTACTCCCTCTGTCTAGGTT 57.207 43.478 0.00 0.00 34.56 3.50
5164 5392 4.678538 AGTACTCCCTCTGTCTAGGTTT 57.321 45.455 0.00 0.00 34.56 3.27
5165 5393 4.345854 AGTACTCCCTCTGTCTAGGTTTG 58.654 47.826 0.00 0.00 34.56 2.93
5166 5394 3.261818 ACTCCCTCTGTCTAGGTTTGT 57.738 47.619 0.00 0.00 34.56 2.83
5167 5395 4.399483 ACTCCCTCTGTCTAGGTTTGTA 57.601 45.455 0.00 0.00 34.56 2.41
5168 5396 4.748701 ACTCCCTCTGTCTAGGTTTGTAA 58.251 43.478 0.00 0.00 34.56 2.41
5169 5397 4.773149 ACTCCCTCTGTCTAGGTTTGTAAG 59.227 45.833 0.00 0.00 34.56 2.34
5170 5398 4.748701 TCCCTCTGTCTAGGTTTGTAAGT 58.251 43.478 0.00 0.00 34.56 2.24
5171 5399 4.771054 TCCCTCTGTCTAGGTTTGTAAGTC 59.229 45.833 0.00 0.00 34.56 3.01
5172 5400 4.527038 CCCTCTGTCTAGGTTTGTAAGTCA 59.473 45.833 0.00 0.00 34.56 3.41
5173 5401 5.187967 CCCTCTGTCTAGGTTTGTAAGTCAT 59.812 44.000 0.00 0.00 34.56 3.06
5174 5402 6.334202 CCTCTGTCTAGGTTTGTAAGTCATC 58.666 44.000 0.00 0.00 31.46 2.92
5175 5403 6.153680 CCTCTGTCTAGGTTTGTAAGTCATCT 59.846 42.308 0.00 0.00 31.46 2.90
5176 5404 7.310113 CCTCTGTCTAGGTTTGTAAGTCATCTT 60.310 40.741 0.00 0.00 33.59 2.40
5177 5405 8.645814 TCTGTCTAGGTTTGTAAGTCATCTTA 57.354 34.615 0.00 0.00 35.36 2.10
5194 5422 9.099454 AGTCATCTTACGAAAATCAAATAGTCC 57.901 33.333 0.00 0.00 0.00 3.85
5195 5423 8.336080 GTCATCTTACGAAAATCAAATAGTCCC 58.664 37.037 0.00 0.00 0.00 4.46
5196 5424 8.044309 TCATCTTACGAAAATCAAATAGTCCCA 58.956 33.333 0.00 0.00 0.00 4.37
5197 5425 8.673711 CATCTTACGAAAATCAAATAGTCCCAA 58.326 33.333 0.00 0.00 0.00 4.12
5198 5426 8.624367 TCTTACGAAAATCAAATAGTCCCAAA 57.376 30.769 0.00 0.00 0.00 3.28
5199 5427 9.069082 TCTTACGAAAATCAAATAGTCCCAAAA 57.931 29.630 0.00 0.00 0.00 2.44
5200 5428 9.124807 CTTACGAAAATCAAATAGTCCCAAAAC 57.875 33.333 0.00 0.00 0.00 2.43
5201 5429 7.045126 ACGAAAATCAAATAGTCCCAAAACA 57.955 32.000 0.00 0.00 0.00 2.83
5202 5430 6.921307 ACGAAAATCAAATAGTCCCAAAACAC 59.079 34.615 0.00 0.00 0.00 3.32
5203 5431 6.920758 CGAAAATCAAATAGTCCCAAAACACA 59.079 34.615 0.00 0.00 0.00 3.72
5204 5432 7.598493 CGAAAATCAAATAGTCCCAAAACACAT 59.402 33.333 0.00 0.00 0.00 3.21
5205 5433 9.921637 GAAAATCAAATAGTCCCAAAACACATA 57.078 29.630 0.00 0.00 0.00 2.29
5206 5434 9.927668 AAAATCAAATAGTCCCAAAACACATAG 57.072 29.630 0.00 0.00 0.00 2.23
5207 5435 7.645058 ATCAAATAGTCCCAAAACACATAGG 57.355 36.000 0.00 0.00 0.00 2.57
5208 5436 5.417580 TCAAATAGTCCCAAAACACATAGGC 59.582 40.000 0.00 0.00 0.00 3.93
5209 5437 2.969821 AGTCCCAAAACACATAGGCA 57.030 45.000 0.00 0.00 0.00 4.75
5210 5438 3.456380 AGTCCCAAAACACATAGGCAT 57.544 42.857 0.00 0.00 0.00 4.40
5211 5439 3.091545 AGTCCCAAAACACATAGGCATG 58.908 45.455 0.00 0.00 38.21 4.06
5212 5440 2.166254 GTCCCAAAACACATAGGCATGG 59.834 50.000 0.00 0.00 36.39 3.66
5213 5441 2.178580 CCCAAAACACATAGGCATGGT 58.821 47.619 0.00 0.00 36.39 3.55
5214 5442 2.094078 CCCAAAACACATAGGCATGGTG 60.094 50.000 0.00 3.83 36.39 4.17
5215 5443 2.609350 CAAAACACATAGGCATGGTGC 58.391 47.619 5.12 0.00 44.08 5.01
5228 5456 3.961182 GCATGGTGCATTAACTCTCATG 58.039 45.455 0.00 0.00 44.26 3.07
5229 5457 3.379372 GCATGGTGCATTAACTCTCATGT 59.621 43.478 0.00 0.00 44.26 3.21
5230 5458 4.142315 GCATGGTGCATTAACTCTCATGTT 60.142 41.667 0.00 0.00 44.26 2.71
5231 5459 5.337554 CATGGTGCATTAACTCTCATGTTG 58.662 41.667 0.00 0.00 0.00 3.33
5232 5460 4.397420 TGGTGCATTAACTCTCATGTTGT 58.603 39.130 0.00 0.00 0.00 3.32
5233 5461 4.826733 TGGTGCATTAACTCTCATGTTGTT 59.173 37.500 0.00 0.00 0.00 2.83
5234 5462 5.301551 TGGTGCATTAACTCTCATGTTGTTT 59.698 36.000 0.00 0.00 0.00 2.83
5235 5463 6.183360 TGGTGCATTAACTCTCATGTTGTTTT 60.183 34.615 0.00 0.00 0.00 2.43
5236 5464 6.701400 GGTGCATTAACTCTCATGTTGTTTTT 59.299 34.615 0.00 0.00 0.00 1.94
5281 5509 9.790344 AAGGAATCAACCAATAAGAGATATGAG 57.210 33.333 0.00 0.00 0.00 2.90
5282 5510 8.381636 AGGAATCAACCAATAAGAGATATGAGG 58.618 37.037 0.00 0.00 0.00 3.86
5283 5511 7.120432 GGAATCAACCAATAAGAGATATGAGGC 59.880 40.741 0.00 0.00 0.00 4.70
5284 5512 5.541845 TCAACCAATAAGAGATATGAGGCG 58.458 41.667 0.00 0.00 0.00 5.52
5285 5513 5.070446 TCAACCAATAAGAGATATGAGGCGT 59.930 40.000 0.00 0.00 0.00 5.68
5286 5514 4.887748 ACCAATAAGAGATATGAGGCGTG 58.112 43.478 0.00 0.00 0.00 5.34
5287 5515 4.345257 ACCAATAAGAGATATGAGGCGTGT 59.655 41.667 0.00 0.00 0.00 4.49
5288 5516 5.538813 ACCAATAAGAGATATGAGGCGTGTA 59.461 40.000 0.00 0.00 0.00 2.90
5289 5517 6.211584 ACCAATAAGAGATATGAGGCGTGTAT 59.788 38.462 0.00 0.00 0.00 2.29
5290 5518 6.533012 CCAATAAGAGATATGAGGCGTGTATG 59.467 42.308 0.00 0.00 0.00 2.39
5291 5519 3.584406 AGAGATATGAGGCGTGTATGC 57.416 47.619 0.00 0.00 0.00 3.14
5292 5520 3.161067 AGAGATATGAGGCGTGTATGCT 58.839 45.455 0.00 0.00 34.52 3.79
5293 5521 3.576118 AGAGATATGAGGCGTGTATGCTT 59.424 43.478 0.00 0.00 34.52 3.91
5294 5522 4.039730 AGAGATATGAGGCGTGTATGCTTT 59.960 41.667 0.00 0.00 34.52 3.51
5295 5523 4.708177 AGATATGAGGCGTGTATGCTTTT 58.292 39.130 0.00 0.00 34.52 2.27
5296 5524 5.853936 AGATATGAGGCGTGTATGCTTTTA 58.146 37.500 0.00 0.00 34.52 1.52
5297 5525 6.288294 AGATATGAGGCGTGTATGCTTTTAA 58.712 36.000 0.00 0.00 34.52 1.52
5298 5526 6.936900 AGATATGAGGCGTGTATGCTTTTAAT 59.063 34.615 0.00 0.00 34.52 1.40
5299 5527 4.614555 TGAGGCGTGTATGCTTTTAATG 57.385 40.909 0.00 0.00 34.52 1.90
5300 5528 4.257731 TGAGGCGTGTATGCTTTTAATGA 58.742 39.130 0.00 0.00 34.52 2.57
5301 5529 4.094294 TGAGGCGTGTATGCTTTTAATGAC 59.906 41.667 0.00 0.00 34.52 3.06
5302 5530 4.261801 AGGCGTGTATGCTTTTAATGACT 58.738 39.130 0.00 0.00 34.52 3.41
5303 5531 4.700213 AGGCGTGTATGCTTTTAATGACTT 59.300 37.500 0.00 0.00 34.52 3.01
5304 5532 5.028375 GGCGTGTATGCTTTTAATGACTTC 58.972 41.667 0.00 0.00 34.52 3.01
5305 5533 5.391523 GGCGTGTATGCTTTTAATGACTTCA 60.392 40.000 0.00 0.00 34.52 3.02
5306 5534 5.734498 GCGTGTATGCTTTTAATGACTTCAG 59.266 40.000 0.00 0.00 0.00 3.02
5307 5535 6.402118 GCGTGTATGCTTTTAATGACTTCAGA 60.402 38.462 0.00 0.00 0.00 3.27
5308 5536 6.955963 CGTGTATGCTTTTAATGACTTCAGAC 59.044 38.462 0.00 0.00 0.00 3.51
5309 5537 7.148573 CGTGTATGCTTTTAATGACTTCAGACT 60.149 37.037 0.00 0.00 0.00 3.24
5310 5538 9.151471 GTGTATGCTTTTAATGACTTCAGACTA 57.849 33.333 0.00 0.00 0.00 2.59
5311 5539 9.151471 TGTATGCTTTTAATGACTTCAGACTAC 57.849 33.333 0.00 0.00 0.00 2.73
5312 5540 7.617041 ATGCTTTTAATGACTTCAGACTACC 57.383 36.000 0.00 0.00 0.00 3.18
5313 5541 6.530120 TGCTTTTAATGACTTCAGACTACCA 58.470 36.000 0.00 0.00 0.00 3.25
5314 5542 6.995686 TGCTTTTAATGACTTCAGACTACCAA 59.004 34.615 0.00 0.00 0.00 3.67
5315 5543 7.500892 TGCTTTTAATGACTTCAGACTACCAAA 59.499 33.333 0.00 0.00 0.00 3.28
5316 5544 8.515414 GCTTTTAATGACTTCAGACTACCAAAT 58.485 33.333 0.00 0.00 0.00 2.32
5321 5549 8.723942 AATGACTTCAGACTACCAAATATGAC 57.276 34.615 0.00 0.00 0.00 3.06
5322 5550 7.239763 TGACTTCAGACTACCAAATATGACA 57.760 36.000 0.00 0.00 0.00 3.58
5323 5551 7.851228 TGACTTCAGACTACCAAATATGACAT 58.149 34.615 0.00 0.00 0.00 3.06
5324 5552 7.765819 TGACTTCAGACTACCAAATATGACATG 59.234 37.037 0.00 0.00 0.00 3.21
5325 5553 7.624549 ACTTCAGACTACCAAATATGACATGT 58.375 34.615 0.00 0.00 0.00 3.21
5326 5554 8.758829 ACTTCAGACTACCAAATATGACATGTA 58.241 33.333 0.00 0.00 0.00 2.29
5327 5555 9.254133 CTTCAGACTACCAAATATGACATGTAG 57.746 37.037 0.00 3.53 33.61 2.74
5328 5556 8.306313 TCAGACTACCAAATATGACATGTAGT 57.694 34.615 12.80 12.80 40.98 2.73
5329 5557 8.197439 TCAGACTACCAAATATGACATGTAGTG 58.803 37.037 16.20 7.01 39.05 2.74
5330 5558 8.197439 CAGACTACCAAATATGACATGTAGTGA 58.803 37.037 16.20 0.00 39.05 3.41
5331 5559 8.928448 AGACTACCAAATATGACATGTAGTGAT 58.072 33.333 16.20 6.12 39.05 3.06
5332 5560 9.197694 GACTACCAAATATGACATGTAGTGATC 57.802 37.037 16.20 3.67 39.05 2.92
5333 5561 8.704668 ACTACCAAATATGACATGTAGTGATCA 58.295 33.333 12.37 0.00 37.93 2.92
5334 5562 9.201127 CTACCAAATATGACATGTAGTGATCAG 57.799 37.037 0.00 0.00 0.00 2.90
5335 5563 7.568349 ACCAAATATGACATGTAGTGATCAGT 58.432 34.615 8.40 8.40 0.00 3.41
5336 5564 8.049117 ACCAAATATGACATGTAGTGATCAGTT 58.951 33.333 8.68 0.00 0.00 3.16
5337 5565 8.896744 CCAAATATGACATGTAGTGATCAGTTT 58.103 33.333 8.68 0.00 0.00 2.66
5338 5566 9.712359 CAAATATGACATGTAGTGATCAGTTTG 57.288 33.333 8.68 7.24 31.46 2.93
5339 5567 9.453572 AAATATGACATGTAGTGATCAGTTTGT 57.546 29.630 8.68 10.27 0.00 2.83
5340 5568 9.453572 AATATGACATGTAGTGATCAGTTTGTT 57.546 29.630 8.68 0.57 0.00 2.83
5341 5569 6.544038 TGACATGTAGTGATCAGTTTGTTG 57.456 37.500 8.68 4.88 0.00 3.33
5342 5570 5.049474 TGACATGTAGTGATCAGTTTGTTGC 60.049 40.000 8.68 1.67 0.00 4.17
5343 5571 4.821260 ACATGTAGTGATCAGTTTGTTGCA 59.179 37.500 8.68 0.07 0.00 4.08
5344 5572 5.474532 ACATGTAGTGATCAGTTTGTTGCAT 59.525 36.000 8.68 2.28 0.00 3.96
5345 5573 5.361135 TGTAGTGATCAGTTTGTTGCATG 57.639 39.130 8.68 0.00 0.00 4.06
5346 5574 3.293311 AGTGATCAGTTTGTTGCATGC 57.707 42.857 11.82 11.82 0.00 4.06
5347 5575 2.624364 AGTGATCAGTTTGTTGCATGCA 59.376 40.909 18.46 18.46 0.00 3.96
5348 5576 3.068448 AGTGATCAGTTTGTTGCATGCAA 59.932 39.130 28.80 28.80 0.00 4.08
5349 5577 3.991773 GTGATCAGTTTGTTGCATGCAAT 59.008 39.130 33.94 16.94 38.28 3.56
5351 5579 2.756829 TCAGTTTGTTGCATGCAATGG 58.243 42.857 33.94 19.31 46.86 3.16
5352 5580 2.102757 TCAGTTTGTTGCATGCAATGGT 59.897 40.909 33.94 15.58 46.86 3.55
5353 5581 3.320256 TCAGTTTGTTGCATGCAATGGTA 59.680 39.130 33.94 18.54 46.86 3.25
5354 5582 4.021280 TCAGTTTGTTGCATGCAATGGTAT 60.021 37.500 33.94 18.33 46.86 2.73
5355 5583 4.691685 CAGTTTGTTGCATGCAATGGTATT 59.308 37.500 33.94 16.44 46.86 1.89
5356 5584 5.868258 CAGTTTGTTGCATGCAATGGTATTA 59.132 36.000 33.94 8.46 46.86 0.98
5357 5585 6.368243 CAGTTTGTTGCATGCAATGGTATTAA 59.632 34.615 33.94 17.36 46.86 1.40
5358 5586 7.064847 CAGTTTGTTGCATGCAATGGTATTAAT 59.935 33.333 33.94 13.06 46.86 1.40
5359 5587 7.607223 AGTTTGTTGCATGCAATGGTATTAATT 59.393 29.630 33.94 14.56 46.86 1.40
5360 5588 8.877779 GTTTGTTGCATGCAATGGTATTAATTA 58.122 29.630 33.94 6.06 46.86 1.40
5361 5589 8.645730 TTGTTGCATGCAATGGTATTAATTAG 57.354 30.769 33.94 0.00 46.86 1.73
5362 5590 6.700960 TGTTGCATGCAATGGTATTAATTAGC 59.299 34.615 33.94 16.88 46.86 3.09
5363 5591 6.402456 TGCATGCAATGGTATTAATTAGCA 57.598 33.333 20.30 0.00 46.86 3.49
5364 5592 6.814043 TGCATGCAATGGTATTAATTAGCAA 58.186 32.000 20.30 0.00 46.86 3.91
5365 5593 7.270779 TGCATGCAATGGTATTAATTAGCAAA 58.729 30.769 20.30 0.00 46.86 3.68
5366 5594 7.932491 TGCATGCAATGGTATTAATTAGCAAAT 59.068 29.630 20.30 0.00 46.86 2.32
5367 5595 9.421806 GCATGCAATGGTATTAATTAGCAAATA 57.578 29.630 14.21 0.00 46.86 1.40
5401 5629 6.639632 TTTTTCATTTCTCTCTCCACCTTG 57.360 37.500 0.00 0.00 0.00 3.61
5402 5630 3.988976 TCATTTCTCTCTCCACCTTGG 57.011 47.619 0.00 0.00 39.43 3.61
5403 5631 3.251484 TCATTTCTCTCTCCACCTTGGT 58.749 45.455 0.00 0.00 39.03 3.67
5404 5632 3.652869 TCATTTCTCTCTCCACCTTGGTT 59.347 43.478 0.00 0.00 39.03 3.67
5405 5633 3.492102 TTTCTCTCTCCACCTTGGTTG 57.508 47.619 0.00 0.00 39.03 3.77
5406 5634 0.687354 TCTCTCTCCACCTTGGTTGC 59.313 55.000 0.00 0.00 39.03 4.17
5407 5635 0.671781 CTCTCTCCACCTTGGTTGCG 60.672 60.000 0.00 0.00 39.03 4.85
5408 5636 1.672356 CTCTCCACCTTGGTTGCGG 60.672 63.158 0.00 0.00 39.03 5.69
5409 5637 2.113139 CTCCACCTTGGTTGCGGT 59.887 61.111 0.00 0.00 39.03 5.68
5412 5640 3.215568 CACCTTGGTTGCGGTGCA 61.216 61.111 0.00 0.00 43.59 4.57
5413 5641 3.216292 ACCTTGGTTGCGGTGCAC 61.216 61.111 8.80 8.80 38.71 4.57
5414 5642 3.215568 CCTTGGTTGCGGTGCACA 61.216 61.111 20.43 0.00 38.71 4.57
5415 5643 2.780094 CCTTGGTTGCGGTGCACAA 61.780 57.895 20.43 0.97 38.71 3.33
5416 5644 1.588667 CTTGGTTGCGGTGCACAAC 60.589 57.895 20.43 14.26 45.30 3.32
5425 5653 2.641197 GGTGCACAACCTAAGGTGG 58.359 57.895 20.43 0.00 46.55 4.61
5426 5654 0.179001 GGTGCACAACCTAAGGTGGT 60.179 55.000 20.43 0.00 46.55 4.16
5432 5660 2.661718 ACAACCTAAGGTGGTGTTTGG 58.338 47.619 0.00 0.00 38.63 3.28
5433 5661 2.024751 ACAACCTAAGGTGGTGTTTGGT 60.025 45.455 0.00 0.00 38.63 3.67
5434 5662 3.028130 CAACCTAAGGTGGTGTTTGGTT 58.972 45.455 0.00 0.00 41.74 3.67
5435 5663 2.940158 ACCTAAGGTGGTGTTTGGTTC 58.060 47.619 0.00 0.00 39.17 3.62
5436 5664 2.512476 ACCTAAGGTGGTGTTTGGTTCT 59.488 45.455 0.00 0.00 39.17 3.01
5437 5665 3.146847 CCTAAGGTGGTGTTTGGTTCTC 58.853 50.000 0.00 0.00 0.00 2.87
5438 5666 3.181443 CCTAAGGTGGTGTTTGGTTCTCT 60.181 47.826 0.00 0.00 0.00 3.10
5439 5667 4.041198 CCTAAGGTGGTGTTTGGTTCTCTA 59.959 45.833 0.00 0.00 0.00 2.43
5440 5668 3.771577 AGGTGGTGTTTGGTTCTCTAG 57.228 47.619 0.00 0.00 0.00 2.43
5441 5669 3.046374 AGGTGGTGTTTGGTTCTCTAGT 58.954 45.455 0.00 0.00 0.00 2.57
5442 5670 3.071167 AGGTGGTGTTTGGTTCTCTAGTC 59.929 47.826 0.00 0.00 0.00 2.59
5443 5671 3.400255 GTGGTGTTTGGTTCTCTAGTCC 58.600 50.000 0.00 0.00 0.00 3.85
5444 5672 3.071167 GTGGTGTTTGGTTCTCTAGTCCT 59.929 47.826 0.00 0.00 0.00 3.85
5445 5673 4.282703 GTGGTGTTTGGTTCTCTAGTCCTA 59.717 45.833 0.00 0.00 0.00 2.94
5446 5674 4.527038 TGGTGTTTGGTTCTCTAGTCCTAG 59.473 45.833 0.00 0.00 34.56 3.02
5447 5675 4.081586 GGTGTTTGGTTCTCTAGTCCTAGG 60.082 50.000 0.82 0.82 34.06 3.02
5448 5676 4.771054 GTGTTTGGTTCTCTAGTCCTAGGA 59.229 45.833 7.62 7.62 34.06 2.94
5449 5677 4.771054 TGTTTGGTTCTCTAGTCCTAGGAC 59.229 45.833 31.29 31.29 44.86 3.85
5475 5703 9.692749 CTTTTTCTAGTCCCAATTAAAAAGTCC 57.307 33.333 11.04 0.00 38.32 3.85
5476 5704 7.770366 TTTCTAGTCCCAATTAAAAAGTCCC 57.230 36.000 0.00 0.00 0.00 4.46
5477 5705 6.713731 TCTAGTCCCAATTAAAAAGTCCCT 57.286 37.500 0.00 0.00 0.00 4.20
5478 5706 6.718294 TCTAGTCCCAATTAAAAAGTCCCTC 58.282 40.000 0.00 0.00 0.00 4.30
5479 5707 4.673968 AGTCCCAATTAAAAAGTCCCTCC 58.326 43.478 0.00 0.00 0.00 4.30
5480 5708 3.767673 GTCCCAATTAAAAAGTCCCTCCC 59.232 47.826 0.00 0.00 0.00 4.30
5481 5709 3.665618 TCCCAATTAAAAAGTCCCTCCCT 59.334 43.478 0.00 0.00 0.00 4.20
5482 5710 3.769300 CCCAATTAAAAAGTCCCTCCCTG 59.231 47.826 0.00 0.00 0.00 4.45
5483 5711 4.416516 CCAATTAAAAAGTCCCTCCCTGT 58.583 43.478 0.00 0.00 0.00 4.00
5484 5712 4.838423 CCAATTAAAAAGTCCCTCCCTGTT 59.162 41.667 0.00 0.00 0.00 3.16
5485 5713 5.306937 CCAATTAAAAAGTCCCTCCCTGTTT 59.693 40.000 0.00 0.00 0.00 2.83
5486 5714 6.223120 CAATTAAAAAGTCCCTCCCTGTTTG 58.777 40.000 0.00 0.00 0.00 2.93
5487 5715 3.398318 AAAAAGTCCCTCCCTGTTTGT 57.602 42.857 0.00 0.00 0.00 2.83
5488 5716 3.398318 AAAAGTCCCTCCCTGTTTGTT 57.602 42.857 0.00 0.00 0.00 2.83
5489 5717 3.398318 AAAGTCCCTCCCTGTTTGTTT 57.602 42.857 0.00 0.00 0.00 2.83
5490 5718 3.398318 AAGTCCCTCCCTGTTTGTTTT 57.602 42.857 0.00 0.00 0.00 2.43
5491 5719 3.398318 AGTCCCTCCCTGTTTGTTTTT 57.602 42.857 0.00 0.00 0.00 1.94
5492 5720 3.296854 AGTCCCTCCCTGTTTGTTTTTC 58.703 45.455 0.00 0.00 0.00 2.29
5493 5721 3.028130 GTCCCTCCCTGTTTGTTTTTCA 58.972 45.455 0.00 0.00 0.00 2.69
5494 5722 3.449377 GTCCCTCCCTGTTTGTTTTTCAA 59.551 43.478 0.00 0.00 0.00 2.69
5495 5723 3.704061 TCCCTCCCTGTTTGTTTTTCAAG 59.296 43.478 0.00 0.00 37.35 3.02
5496 5724 3.704061 CCCTCCCTGTTTGTTTTTCAAGA 59.296 43.478 0.00 0.00 37.35 3.02
5497 5725 4.441495 CCCTCCCTGTTTGTTTTTCAAGAC 60.441 45.833 0.00 0.00 37.35 3.01
5498 5726 4.402474 CCTCCCTGTTTGTTTTTCAAGACT 59.598 41.667 0.00 0.00 37.35 3.24
5499 5727 5.592688 CCTCCCTGTTTGTTTTTCAAGACTA 59.407 40.000 0.00 0.00 37.35 2.59
5500 5728 6.096282 CCTCCCTGTTTGTTTTTCAAGACTAA 59.904 38.462 0.00 0.00 37.35 2.24
5501 5729 7.363443 CCTCCCTGTTTGTTTTTCAAGACTAAA 60.363 37.037 0.00 0.00 37.35 1.85
5502 5730 7.897864 TCCCTGTTTGTTTTTCAAGACTAAAA 58.102 30.769 0.00 0.00 37.35 1.52
5503 5731 8.368668 TCCCTGTTTGTTTTTCAAGACTAAAAA 58.631 29.630 0.00 0.00 37.35 1.94
5504 5732 8.655970 CCCTGTTTGTTTTTCAAGACTAAAAAG 58.344 33.333 0.00 0.00 36.70 2.27
5505 5733 9.203421 CCTGTTTGTTTTTCAAGACTAAAAAGT 57.797 29.630 0.00 0.00 36.70 2.66
5519 5747 7.853299 AGACTAAAAAGTCTCTATTCCCTTCC 58.147 38.462 2.22 0.00 45.09 3.46
5520 5748 7.680739 AGACTAAAAAGTCTCTATTCCCTTCCT 59.319 37.037 2.22 0.00 45.09 3.36
5521 5749 8.912614 ACTAAAAAGTCTCTATTCCCTTCCTA 57.087 34.615 0.00 0.00 0.00 2.94
5522 5750 8.983789 ACTAAAAAGTCTCTATTCCCTTCCTAG 58.016 37.037 0.00 0.00 0.00 3.02
5523 5751 9.203163 CTAAAAAGTCTCTATTCCCTTCCTAGA 57.797 37.037 0.00 0.00 0.00 2.43
5524 5752 7.669089 AAAAGTCTCTATTCCCTTCCTAGAG 57.331 40.000 0.00 0.00 39.78 2.43
5525 5753 5.333566 AGTCTCTATTCCCTTCCTAGAGG 57.666 47.826 6.11 0.00 39.19 3.69
5526 5754 4.735020 AGTCTCTATTCCCTTCCTAGAGGT 59.265 45.833 6.11 0.00 39.19 3.85
5527 5755 5.196984 AGTCTCTATTCCCTTCCTAGAGGTT 59.803 44.000 6.11 0.00 39.19 3.50
5528 5756 6.393440 AGTCTCTATTCCCTTCCTAGAGGTTA 59.607 42.308 6.11 0.00 39.19 2.85
5529 5757 7.075785 AGTCTCTATTCCCTTCCTAGAGGTTAT 59.924 40.741 6.11 0.00 39.19 1.89
5530 5758 7.731235 GTCTCTATTCCCTTCCTAGAGGTTATT 59.269 40.741 6.11 0.00 39.19 1.40
5531 5759 8.967577 TCTCTATTCCCTTCCTAGAGGTTATTA 58.032 37.037 6.11 0.00 39.19 0.98
5532 5760 9.603189 CTCTATTCCCTTCCTAGAGGTTATTAA 57.397 37.037 0.00 0.00 36.43 1.40
5533 5761 9.962835 TCTATTCCCTTCCTAGAGGTTATTAAA 57.037 33.333 0.00 0.00 34.88 1.52
5551 5779 9.744468 GTTATTAAATAACCATGTTGCCCTTAG 57.256 33.333 0.00 0.00 39.30 2.18
5552 5780 7.971368 ATTAAATAACCATGTTGCCCTTAGT 57.029 32.000 0.00 0.00 0.00 2.24
5554 5782 9.654919 ATTAAATAACCATGTTGCCCTTAGTAT 57.345 29.630 0.00 0.00 0.00 2.12
5558 5786 9.959721 AATAACCATGTTGCCCTTAGTATATAG 57.040 33.333 0.00 0.00 0.00 1.31
5559 5787 7.626999 AACCATGTTGCCCTTAGTATATAGA 57.373 36.000 0.00 0.00 0.00 1.98
5560 5788 7.626999 ACCATGTTGCCCTTAGTATATAGAA 57.373 36.000 0.00 0.00 0.00 2.10
5561 5789 8.041143 ACCATGTTGCCCTTAGTATATAGAAA 57.959 34.615 0.00 0.00 0.00 2.52
5562 5790 8.499406 ACCATGTTGCCCTTAGTATATAGAAAA 58.501 33.333 0.00 0.00 0.00 2.29
5563 5791 9.349713 CCATGTTGCCCTTAGTATATAGAAAAA 57.650 33.333 0.00 0.00 0.00 1.94
5583 5811 9.612066 AGAAAAATAACAATCAAACAACACCAT 57.388 25.926 0.00 0.00 0.00 3.55
5584 5812 9.649024 GAAAAATAACAATCAAACAACACCATG 57.351 29.630 0.00 0.00 0.00 3.66
5585 5813 7.727331 AAATAACAATCAAACAACACCATGG 57.273 32.000 11.19 11.19 0.00 3.66
5586 5814 3.749665 ACAATCAAACAACACCATGGG 57.250 42.857 18.09 7.72 0.00 4.00
5587 5815 2.368221 ACAATCAAACAACACCATGGGG 59.632 45.455 14.08 14.08 41.29 4.96
5608 5836 3.840594 CGGGCCAATGGGTGCATG 61.841 66.667 4.39 0.00 36.17 4.06
5609 5837 3.472726 GGGCCAATGGGTGCATGG 61.473 66.667 4.39 0.00 37.29 3.66
5610 5838 2.364056 GGCCAATGGGTGCATGGA 60.364 61.111 7.48 0.00 36.27 3.41
5611 5839 2.428925 GGCCAATGGGTGCATGGAG 61.429 63.158 7.48 0.00 36.27 3.86
5612 5840 2.428925 GCCAATGGGTGCATGGAGG 61.429 63.158 7.48 0.00 36.27 4.30
5613 5841 1.759299 CCAATGGGTGCATGGAGGG 60.759 63.158 0.00 0.00 36.27 4.30
5614 5842 1.759299 CAATGGGTGCATGGAGGGG 60.759 63.158 0.00 0.00 0.00 4.79
5615 5843 3.684369 AATGGGTGCATGGAGGGGC 62.684 63.158 0.00 0.00 0.00 5.80
5617 5845 4.147587 GGGTGCATGGAGGGGCAT 62.148 66.667 0.00 0.00 42.75 4.40
5618 5846 2.042639 GGTGCATGGAGGGGCATT 60.043 61.111 0.00 0.00 42.75 3.56
5619 5847 2.428925 GGTGCATGGAGGGGCATTG 61.429 63.158 0.00 0.00 42.75 2.82
5620 5848 1.683365 GTGCATGGAGGGGCATTGT 60.683 57.895 0.00 0.00 42.75 2.71
5621 5849 1.078891 TGCATGGAGGGGCATTGTT 59.921 52.632 0.00 0.00 34.58 2.83
5622 5850 1.259142 TGCATGGAGGGGCATTGTTG 61.259 55.000 0.00 0.00 34.58 3.33
5623 5851 1.963464 GCATGGAGGGGCATTGTTGG 61.963 60.000 0.00 0.00 0.00 3.77
5624 5852 0.324552 CATGGAGGGGCATTGTTGGA 60.325 55.000 0.00 0.00 0.00 3.53
5625 5853 0.413037 ATGGAGGGGCATTGTTGGAA 59.587 50.000 0.00 0.00 0.00 3.53
5626 5854 0.189574 TGGAGGGGCATTGTTGGAAA 59.810 50.000 0.00 0.00 0.00 3.13
5627 5855 1.347062 GGAGGGGCATTGTTGGAAAA 58.653 50.000 0.00 0.00 0.00 2.29
5628 5856 1.276138 GGAGGGGCATTGTTGGAAAAG 59.724 52.381 0.00 0.00 0.00 2.27
5629 5857 1.970640 GAGGGGCATTGTTGGAAAAGT 59.029 47.619 0.00 0.00 0.00 2.66
5630 5858 1.970640 AGGGGCATTGTTGGAAAAGTC 59.029 47.619 0.00 0.00 0.00 3.01
5631 5859 1.970640 GGGGCATTGTTGGAAAAGTCT 59.029 47.619 0.00 0.00 0.00 3.24
5632 5860 2.029020 GGGGCATTGTTGGAAAAGTCTC 60.029 50.000 0.00 0.00 0.00 3.36
5633 5861 2.627699 GGGCATTGTTGGAAAAGTCTCA 59.372 45.455 0.00 0.00 0.00 3.27
5634 5862 3.069443 GGGCATTGTTGGAAAAGTCTCAA 59.931 43.478 0.00 0.00 0.00 3.02
5635 5863 4.442753 GGGCATTGTTGGAAAAGTCTCAAA 60.443 41.667 0.00 0.00 0.00 2.69
5636 5864 5.115480 GGCATTGTTGGAAAAGTCTCAAAA 58.885 37.500 0.00 0.00 0.00 2.44
5637 5865 5.584251 GGCATTGTTGGAAAAGTCTCAAAAA 59.416 36.000 0.00 0.00 0.00 1.94
5638 5866 6.238184 GGCATTGTTGGAAAAGTCTCAAAAAG 60.238 38.462 0.00 0.00 0.00 2.27
5639 5867 6.313658 GCATTGTTGGAAAAGTCTCAAAAAGT 59.686 34.615 0.00 0.00 0.00 2.66
5640 5868 7.464577 GCATTGTTGGAAAAGTCTCAAAAAGTC 60.465 37.037 0.00 0.00 0.00 3.01
5641 5869 5.961272 TGTTGGAAAAGTCTCAAAAAGTCC 58.039 37.500 0.00 0.00 0.00 3.85
5642 5870 5.105513 TGTTGGAAAAGTCTCAAAAAGTCCC 60.106 40.000 0.00 0.00 0.00 4.46
5643 5871 4.605183 TGGAAAAGTCTCAAAAAGTCCCA 58.395 39.130 0.00 0.00 0.00 4.37
5644 5872 5.020132 TGGAAAAGTCTCAAAAAGTCCCAA 58.980 37.500 0.00 0.00 0.00 4.12
5645 5873 5.482175 TGGAAAAGTCTCAAAAAGTCCCAAA 59.518 36.000 0.00 0.00 0.00 3.28
5646 5874 6.014156 TGGAAAAGTCTCAAAAAGTCCCAAAA 60.014 34.615 0.00 0.00 0.00 2.44
5647 5875 6.876789 GGAAAAGTCTCAAAAAGTCCCAAAAA 59.123 34.615 0.00 0.00 0.00 1.94
5648 5876 7.064609 GGAAAAGTCTCAAAAAGTCCCAAAAAG 59.935 37.037 0.00 0.00 0.00 2.27
5649 5877 6.850752 AAGTCTCAAAAAGTCCCAAAAAGA 57.149 33.333 0.00 0.00 0.00 2.52
5650 5878 6.208988 AGTCTCAAAAAGTCCCAAAAAGAC 57.791 37.500 0.00 0.00 34.31 3.01
5651 5879 5.952347 AGTCTCAAAAAGTCCCAAAAAGACT 59.048 36.000 0.00 0.00 46.50 3.24
5652 5880 6.095580 AGTCTCAAAAAGTCCCAAAAAGACTC 59.904 38.462 0.00 0.00 43.77 3.36
5653 5881 5.359860 TCTCAAAAAGTCCCAAAAAGACTCC 59.640 40.000 0.00 0.00 43.77 3.85
5654 5882 5.269189 TCAAAAAGTCCCAAAAAGACTCCT 58.731 37.500 0.00 0.00 43.77 3.69
5655 5883 5.719563 TCAAAAAGTCCCAAAAAGACTCCTT 59.280 36.000 0.00 0.00 43.77 3.36
5656 5884 6.893005 TCAAAAAGTCCCAAAAAGACTCCTTA 59.107 34.615 0.00 0.00 43.77 2.69
5657 5885 7.397761 TCAAAAAGTCCCAAAAAGACTCCTTAA 59.602 33.333 0.00 0.00 43.77 1.85
5658 5886 6.961360 AAAGTCCCAAAAAGACTCCTTAAG 57.039 37.500 0.00 0.00 43.77 1.85
5659 5887 5.906772 AGTCCCAAAAAGACTCCTTAAGA 57.093 39.130 3.36 0.00 40.61 2.10
5660 5888 6.299922 AAGTCCCAAAAAGACTCCTTAAGAG 58.700 40.000 3.36 2.36 43.77 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
269 273 2.639839 AGCACTAGGGAAGCAAGAAGAA 59.360 45.455 0.00 0.00 0.00 2.52
275 279 0.036010 GAGCAGCACTAGGGAAGCAA 60.036 55.000 11.07 0.00 0.00 3.91
297 301 1.589993 CTCTACTCGGCGCACATGG 60.590 63.158 10.83 0.00 0.00 3.66
298 302 0.867753 GTCTCTACTCGGCGCACATG 60.868 60.000 10.83 0.00 0.00 3.21
299 303 1.032657 AGTCTCTACTCGGCGCACAT 61.033 55.000 10.83 0.00 0.00 3.21
300 304 1.241990 AAGTCTCTACTCGGCGCACA 61.242 55.000 10.83 0.00 33.75 4.57
301 305 0.798771 CAAGTCTCTACTCGGCGCAC 60.799 60.000 10.83 0.00 33.75 5.34
302 306 1.506718 CAAGTCTCTACTCGGCGCA 59.493 57.895 10.83 0.00 33.75 6.09
303 307 1.874466 GCAAGTCTCTACTCGGCGC 60.874 63.158 0.00 0.00 33.75 6.53
304 308 1.226717 GGCAAGTCTCTACTCGGCG 60.227 63.158 0.00 0.00 37.01 6.46
306 310 3.797184 GCATAAGGCAAGTCTCTACTCGG 60.797 52.174 0.00 0.00 43.97 4.63
307 311 3.376540 GCATAAGGCAAGTCTCTACTCG 58.623 50.000 0.00 0.00 43.97 4.18
319 323 4.913524 CGAACACCGAGAGCATAAGGCA 62.914 54.545 0.00 0.00 43.12 4.75
321 325 1.134367 TCGAACACCGAGAGCATAAGG 59.866 52.381 0.00 0.00 43.23 2.69
471 475 2.351060 CGGCAAGGACGACGCTATATAA 60.351 50.000 0.00 0.00 35.20 0.98
473 477 0.039437 CGGCAAGGACGACGCTATAT 60.039 55.000 0.00 0.00 35.20 0.86
517 521 2.125552 CACTGCGCTCGGGATCAA 60.126 61.111 9.73 0.00 0.00 2.57
569 573 3.537874 GTGACGGGGCGAGGCTAT 61.538 66.667 0.00 0.00 0.00 2.97
587 591 2.808543 GCAGATCAAAAGCCCTATACGG 59.191 50.000 0.00 0.00 0.00 4.02
588 592 3.733337 AGCAGATCAAAAGCCCTATACG 58.267 45.455 0.00 0.00 0.00 3.06
679 684 4.437772 TTTTCAAGTTCGGACCGTTTTT 57.562 36.364 14.79 3.83 0.00 1.94
683 688 2.292292 CCATTTTTCAAGTTCGGACCGT 59.708 45.455 14.79 0.00 0.00 4.83
684 689 2.920647 GCCATTTTTCAAGTTCGGACCG 60.921 50.000 7.84 7.84 0.00 4.79
685 690 2.296190 AGCCATTTTTCAAGTTCGGACC 59.704 45.455 0.00 0.00 0.00 4.46
733 780 2.037901 CTCAAGAGCTGCCATAGAGGA 58.962 52.381 0.00 0.00 41.22 3.71
834 881 2.294791 CCACGTGTTTGGAATGGCTAAA 59.705 45.455 15.65 0.00 39.24 1.85
840 887 3.641437 ATGAACCACGTGTTTGGAATG 57.359 42.857 15.65 0.00 39.24 2.67
841 888 3.304391 CGAATGAACCACGTGTTTGGAAT 60.304 43.478 15.65 0.00 39.24 3.01
845 892 1.332375 ACCGAATGAACCACGTGTTTG 59.668 47.619 15.65 5.50 37.29 2.93
851 898 0.790207 CAGTCACCGAATGAACCACG 59.210 55.000 0.00 0.00 39.72 4.94
863 910 6.012658 TGCAAACAAGATAAATCAGTCACC 57.987 37.500 0.00 0.00 0.00 4.02
869 916 6.270156 TCTGCATGCAAACAAGATAAATCA 57.730 33.333 22.88 0.00 0.00 2.57
938 985 1.305046 GTCTTCCTCCGGGGACTCA 60.305 63.158 0.37 0.00 45.03 3.41
941 988 0.036294 CTTTGTCTTCCTCCGGGGAC 60.036 60.000 0.37 4.22 45.03 4.46
1111 1158 2.498167 AGTGTTGCCATCAGTGTTCTC 58.502 47.619 0.00 0.00 0.00 2.87
1128 1175 5.759763 TGTGTCCAGCATAATAGCAATAGTG 59.240 40.000 0.00 0.00 36.85 2.74
1132 1179 5.068198 CCTTTGTGTCCAGCATAATAGCAAT 59.932 40.000 0.00 0.00 36.85 3.56
1190 1237 2.754002 TCATCTTGCCGCATTTGATTGA 59.246 40.909 0.00 0.00 0.00 2.57
1193 1240 5.508489 CCTTAATCATCTTGCCGCATTTGAT 60.508 40.000 0.00 0.77 0.00 2.57
1278 1325 5.237344 CGTGAAATTGAACTCTTGACCTTCT 59.763 40.000 0.00 0.00 0.00 2.85
1347 1394 4.504097 TCAACATCGCTTATGAAGTCATCG 59.496 41.667 0.00 0.00 39.07 3.84
1510 1572 8.892723 TGCTAATATTATGAAATAGCGGGATTG 58.107 33.333 0.00 0.00 30.10 2.67
1639 1726 9.020731 TCACAATATGAGTAGTCTAAGACACAA 57.979 33.333 0.00 0.00 31.76 3.33
1640 1727 8.575649 TCACAATATGAGTAGTCTAAGACACA 57.424 34.615 0.00 0.00 31.76 3.72
1684 1815 8.844244 ACAGCCAAATAATCTGATAGAATGAAC 58.156 33.333 0.00 0.00 0.00 3.18
1715 1846 6.908284 CCTGCAAACAAGACAATTTGATTTTG 59.092 34.615 2.79 6.99 37.91 2.44
1825 1956 2.984562 TGACTGTGTCAGCTGTTTTCA 58.015 42.857 14.67 8.30 37.67 2.69
1957 2088 3.565482 GCACACCTCTGAGACAATTGAAA 59.435 43.478 13.59 0.00 0.00 2.69
1971 2102 1.002430 TCAGGATTCTGTGCACACCTC 59.998 52.381 20.67 14.63 41.59 3.85
1983 2114 4.035324 CAGAAGCATGTCATGTCAGGATTC 59.965 45.833 21.95 21.95 42.24 2.52
2044 2175 5.766150 AGAAATCAACACCATTTTCGACA 57.234 34.783 0.00 0.00 34.17 4.35
2047 2178 6.252015 CAGCATAGAAATCAACACCATTTTCG 59.748 38.462 0.00 0.00 34.17 3.46
2146 2277 7.182749 CCCAATATAGATATCCAGGACTTCCAA 59.817 40.741 0.00 0.00 38.89 3.53
2332 2464 3.004839 GGGAAGGAGTTGCTCTTTGTTTC 59.995 47.826 0.00 0.00 30.02 2.78
2340 2472 1.271597 ACATGTGGGAAGGAGTTGCTC 60.272 52.381 0.00 0.00 0.00 4.26
2362 2494 7.714377 CACTCATGACAGCTATCTAAGGAAATT 59.286 37.037 0.00 0.00 0.00 1.82
2417 2557 8.862325 TGGAATTCATACGCCATATAAGAATT 57.138 30.769 7.93 0.00 37.05 2.17
2711 2880 5.105310 TGTTCTTGGCATAGGAGAGTAGTTC 60.105 44.000 0.00 0.00 0.00 3.01
2843 3031 5.975344 GCAGCAGTAATTGTACGTCACTATA 59.025 40.000 0.00 0.00 35.20 1.31
2851 3039 2.736721 ACACAGCAGCAGTAATTGTACG 59.263 45.455 0.00 0.00 35.20 3.67
3072 3270 0.107848 GGGATTGACCGGTGAATCGT 60.108 55.000 31.74 9.27 40.11 3.73
3079 3277 1.141053 GCTGATAAGGGATTGACCGGT 59.859 52.381 6.92 6.92 40.11 5.28
3083 3281 1.543429 CGGGGCTGATAAGGGATTGAC 60.543 57.143 0.00 0.00 0.00 3.18
3085 3283 0.764890 TCGGGGCTGATAAGGGATTG 59.235 55.000 0.00 0.00 0.00 2.67
3259 3458 5.010922 TGCTCTGATAAATGCAGTGGTTTTT 59.989 36.000 0.00 0.00 34.98 1.94
3797 4001 2.481289 ACAAGACTGGGAGCTTTAGC 57.519 50.000 0.00 0.00 42.49 3.09
3951 4155 4.067896 AGCGCCTACAAGAATAATCATGG 58.932 43.478 2.29 0.00 0.00 3.66
4173 4377 5.936956 AGTAGATTTCACAAGAGGAAAGCAG 59.063 40.000 6.01 0.00 41.69 4.24
4464 4668 7.040132 TGACAAACCAGCATGTTTATATTGTCA 60.040 33.333 20.64 20.64 38.05 3.58
4632 4836 4.080526 ACTTGTATGTGGTGGGTAGATTCC 60.081 45.833 0.00 0.00 0.00 3.01
4687 4891 0.179145 CTCTCGTGATAAACCGGCGT 60.179 55.000 6.01 0.00 0.00 5.68
4688 4892 0.870307 CCTCTCGTGATAAACCGGCG 60.870 60.000 0.00 0.00 0.00 6.46
4689 4893 0.458669 TCCTCTCGTGATAAACCGGC 59.541 55.000 0.00 0.00 0.00 6.13
4690 4894 2.953466 TTCCTCTCGTGATAAACCGG 57.047 50.000 0.00 0.00 0.00 5.28
4691 4895 3.846360 ACTTTCCTCTCGTGATAAACCG 58.154 45.455 0.00 0.00 0.00 4.44
4692 4896 6.204108 TCAAAACTTTCCTCTCGTGATAAACC 59.796 38.462 0.00 0.00 0.00 3.27
4693 4897 7.186021 TCAAAACTTTCCTCTCGTGATAAAC 57.814 36.000 0.00 0.00 0.00 2.01
4694 4898 7.659799 TCATCAAAACTTTCCTCTCGTGATAAA 59.340 33.333 0.00 0.00 0.00 1.40
4707 4925 4.159377 TGGATGCGTCATCAAAACTTTC 57.841 40.909 17.57 3.24 42.13 2.62
4720 4938 2.113860 AGTAACATGCTTGGATGCGT 57.886 45.000 4.44 0.00 35.36 5.24
4732 4950 7.154435 ACACGACACAGTAGAATAGTAACAT 57.846 36.000 0.00 0.00 0.00 2.71
4753 4971 8.136165 AGAATTACTCGGATGTAGTCATAACAC 58.864 37.037 0.00 0.00 34.06 3.32
4792 5010 2.464865 CTACAGCTCCGACATAGCAAC 58.535 52.381 0.00 0.00 42.62 4.17
4817 5035 6.655062 TCAGTGTTTACAAGTAAATTCAGCG 58.345 36.000 8.47 0.00 37.37 5.18
5006 5227 4.524328 AGCCAACTCCAAATGAACCTTAAG 59.476 41.667 0.00 0.00 0.00 1.85
5027 5251 1.129437 GCATTTGTCTCGGTGAGAAGC 59.871 52.381 0.00 0.00 40.59 3.86
5064 5288 4.285775 TCATGATAGTCCGCCCAATGATAA 59.714 41.667 0.00 0.00 0.00 1.75
5104 5332 6.750039 ACACAAAGCATTTACTACACAACAAC 59.250 34.615 0.00 0.00 35.03 3.32
5112 5340 6.142320 GCACAAGAACACAAAGCATTTACTAC 59.858 38.462 0.00 0.00 35.03 2.73
5113 5341 6.183360 TGCACAAGAACACAAAGCATTTACTA 60.183 34.615 0.00 0.00 35.03 1.82
5114 5342 5.043248 GCACAAGAACACAAAGCATTTACT 58.957 37.500 0.00 0.00 35.03 2.24
5123 5351 7.767261 AGTACTAAATTGCACAAGAACACAAA 58.233 30.769 0.00 0.00 0.00 2.83
5126 5354 6.371389 GGAGTACTAAATTGCACAAGAACAC 58.629 40.000 0.00 0.00 0.00 3.32
5139 5367 6.344232 ACCTAGACAGAGGGAGTACTAAAT 57.656 41.667 0.00 0.00 41.36 1.40
5140 5368 5.793034 ACCTAGACAGAGGGAGTACTAAA 57.207 43.478 0.00 0.00 41.36 1.85
5141 5369 5.793034 AACCTAGACAGAGGGAGTACTAA 57.207 43.478 0.00 0.00 41.36 2.24
5142 5370 5.014966 ACAAACCTAGACAGAGGGAGTACTA 59.985 44.000 0.00 0.00 41.36 1.82
5143 5371 4.202695 ACAAACCTAGACAGAGGGAGTACT 60.203 45.833 0.00 0.00 41.36 2.73
5144 5372 4.087907 ACAAACCTAGACAGAGGGAGTAC 58.912 47.826 0.00 0.00 41.36 2.73
5145 5373 4.399483 ACAAACCTAGACAGAGGGAGTA 57.601 45.455 0.00 0.00 41.36 2.59
5146 5374 3.261818 ACAAACCTAGACAGAGGGAGT 57.738 47.619 0.00 0.00 41.36 3.85
5147 5375 4.773149 ACTTACAAACCTAGACAGAGGGAG 59.227 45.833 0.00 0.00 41.36 4.30
5148 5376 4.748701 ACTTACAAACCTAGACAGAGGGA 58.251 43.478 0.00 0.00 41.36 4.20
5149 5377 4.527038 TGACTTACAAACCTAGACAGAGGG 59.473 45.833 0.00 0.00 41.36 4.30
5150 5378 5.723672 TGACTTACAAACCTAGACAGAGG 57.276 43.478 0.00 0.00 42.89 3.69
5151 5379 7.164230 AGATGACTTACAAACCTAGACAGAG 57.836 40.000 0.00 0.00 0.00 3.35
5152 5380 7.540474 AAGATGACTTACAAACCTAGACAGA 57.460 36.000 0.00 0.00 34.28 3.41
5174 5402 9.124807 GTTTTGGGACTATTTGATTTTCGTAAG 57.875 33.333 0.00 0.00 0.00 2.34
5175 5403 8.630917 TGTTTTGGGACTATTTGATTTTCGTAA 58.369 29.630 0.00 0.00 0.00 3.18
5176 5404 8.077386 GTGTTTTGGGACTATTTGATTTTCGTA 58.923 33.333 0.00 0.00 0.00 3.43
5177 5405 6.921307 GTGTTTTGGGACTATTTGATTTTCGT 59.079 34.615 0.00 0.00 0.00 3.85
5178 5406 6.920758 TGTGTTTTGGGACTATTTGATTTTCG 59.079 34.615 0.00 0.00 0.00 3.46
5179 5407 8.831715 ATGTGTTTTGGGACTATTTGATTTTC 57.168 30.769 0.00 0.00 0.00 2.29
5180 5408 9.927668 CTATGTGTTTTGGGACTATTTGATTTT 57.072 29.630 0.00 0.00 0.00 1.82
5181 5409 8.531146 CCTATGTGTTTTGGGACTATTTGATTT 58.469 33.333 0.00 0.00 0.00 2.17
5182 5410 7.363793 GCCTATGTGTTTTGGGACTATTTGATT 60.364 37.037 0.00 0.00 0.00 2.57
5183 5411 6.096846 GCCTATGTGTTTTGGGACTATTTGAT 59.903 38.462 0.00 0.00 0.00 2.57
5184 5412 5.417580 GCCTATGTGTTTTGGGACTATTTGA 59.582 40.000 0.00 0.00 0.00 2.69
5185 5413 5.184864 TGCCTATGTGTTTTGGGACTATTTG 59.815 40.000 0.00 0.00 0.00 2.32
5186 5414 5.329399 TGCCTATGTGTTTTGGGACTATTT 58.671 37.500 0.00 0.00 0.00 1.40
5187 5415 4.929479 TGCCTATGTGTTTTGGGACTATT 58.071 39.130 0.00 0.00 0.00 1.73
5188 5416 4.584638 TGCCTATGTGTTTTGGGACTAT 57.415 40.909 0.00 0.00 0.00 2.12
5189 5417 4.269183 CATGCCTATGTGTTTTGGGACTA 58.731 43.478 0.00 0.00 0.00 2.59
5190 5418 2.969821 TGCCTATGTGTTTTGGGACT 57.030 45.000 0.00 0.00 0.00 3.85
5191 5419 2.166254 CCATGCCTATGTGTTTTGGGAC 59.834 50.000 0.00 0.00 32.21 4.46
5192 5420 2.225242 ACCATGCCTATGTGTTTTGGGA 60.225 45.455 0.00 0.00 32.21 4.37
5193 5421 2.094078 CACCATGCCTATGTGTTTTGGG 60.094 50.000 0.00 0.00 32.21 4.12
5194 5422 2.674747 GCACCATGCCTATGTGTTTTGG 60.675 50.000 1.79 0.00 37.42 3.28
5195 5423 2.029200 TGCACCATGCCTATGTGTTTTG 60.029 45.455 0.00 0.00 44.23 2.44
5196 5424 2.246469 TGCACCATGCCTATGTGTTTT 58.754 42.857 0.00 0.00 44.23 2.43
5197 5425 1.921982 TGCACCATGCCTATGTGTTT 58.078 45.000 0.00 0.00 44.23 2.83
5198 5426 2.148446 ATGCACCATGCCTATGTGTT 57.852 45.000 0.00 0.00 44.23 3.32
5199 5427 2.148446 AATGCACCATGCCTATGTGT 57.852 45.000 0.00 0.00 44.23 3.72
5200 5428 3.633525 AGTTAATGCACCATGCCTATGTG 59.366 43.478 0.00 0.00 44.23 3.21
5201 5429 3.885297 GAGTTAATGCACCATGCCTATGT 59.115 43.478 0.00 0.00 44.23 2.29
5202 5430 4.139786 AGAGTTAATGCACCATGCCTATG 58.860 43.478 0.00 0.00 44.23 2.23
5203 5431 4.141413 TGAGAGTTAATGCACCATGCCTAT 60.141 41.667 0.00 0.00 44.23 2.57
5204 5432 3.199727 TGAGAGTTAATGCACCATGCCTA 59.800 43.478 0.00 0.00 44.23 3.93
5205 5433 2.025981 TGAGAGTTAATGCACCATGCCT 60.026 45.455 0.00 0.00 44.23 4.75
5206 5434 2.368439 TGAGAGTTAATGCACCATGCC 58.632 47.619 0.00 0.00 44.23 4.40
5207 5435 3.379372 ACATGAGAGTTAATGCACCATGC 59.621 43.478 0.00 0.00 45.29 4.06
5208 5436 5.106038 ACAACATGAGAGTTAATGCACCATG 60.106 40.000 0.00 0.00 36.81 3.66
5209 5437 5.012239 ACAACATGAGAGTTAATGCACCAT 58.988 37.500 0.00 0.00 0.00 3.55
5210 5438 4.397420 ACAACATGAGAGTTAATGCACCA 58.603 39.130 0.00 0.00 0.00 4.17
5211 5439 5.376854 AACAACATGAGAGTTAATGCACC 57.623 39.130 0.00 0.00 0.00 5.01
5212 5440 7.698836 AAAAACAACATGAGAGTTAATGCAC 57.301 32.000 0.00 0.00 0.00 4.57
5255 5483 9.790344 CTCATATCTCTTATTGGTTGATTCCTT 57.210 33.333 0.00 0.00 0.00 3.36
5256 5484 8.381636 CCTCATATCTCTTATTGGTTGATTCCT 58.618 37.037 0.00 0.00 0.00 3.36
5257 5485 7.120432 GCCTCATATCTCTTATTGGTTGATTCC 59.880 40.741 0.00 0.00 0.00 3.01
5258 5486 7.148507 CGCCTCATATCTCTTATTGGTTGATTC 60.149 40.741 0.00 0.00 0.00 2.52
5259 5487 6.652481 CGCCTCATATCTCTTATTGGTTGATT 59.348 38.462 0.00 0.00 0.00 2.57
5260 5488 6.169094 CGCCTCATATCTCTTATTGGTTGAT 58.831 40.000 0.00 0.00 0.00 2.57
5261 5489 5.070446 ACGCCTCATATCTCTTATTGGTTGA 59.930 40.000 0.00 0.00 0.00 3.18
5262 5490 5.178252 CACGCCTCATATCTCTTATTGGTTG 59.822 44.000 0.00 0.00 0.00 3.77
5263 5491 5.163301 ACACGCCTCATATCTCTTATTGGTT 60.163 40.000 0.00 0.00 0.00 3.67
5264 5492 4.345257 ACACGCCTCATATCTCTTATTGGT 59.655 41.667 0.00 0.00 0.00 3.67
5265 5493 4.887748 ACACGCCTCATATCTCTTATTGG 58.112 43.478 0.00 0.00 0.00 3.16
5266 5494 6.035435 GCATACACGCCTCATATCTCTTATTG 59.965 42.308 0.00 0.00 0.00 1.90
5267 5495 6.071108 AGCATACACGCCTCATATCTCTTATT 60.071 38.462 0.00 0.00 0.00 1.40
5268 5496 5.420421 AGCATACACGCCTCATATCTCTTAT 59.580 40.000 0.00 0.00 0.00 1.73
5269 5497 4.767409 AGCATACACGCCTCATATCTCTTA 59.233 41.667 0.00 0.00 0.00 2.10
5270 5498 3.576118 AGCATACACGCCTCATATCTCTT 59.424 43.478 0.00 0.00 0.00 2.85
5271 5499 3.161067 AGCATACACGCCTCATATCTCT 58.839 45.455 0.00 0.00 0.00 3.10
5272 5500 3.584406 AGCATACACGCCTCATATCTC 57.416 47.619 0.00 0.00 0.00 2.75
5273 5501 4.342862 AAAGCATACACGCCTCATATCT 57.657 40.909 0.00 0.00 0.00 1.98
5274 5502 6.539649 TTAAAAGCATACACGCCTCATATC 57.460 37.500 0.00 0.00 0.00 1.63
5275 5503 6.710295 TCATTAAAAGCATACACGCCTCATAT 59.290 34.615 0.00 0.00 0.00 1.78
5276 5504 6.018262 GTCATTAAAAGCATACACGCCTCATA 60.018 38.462 0.00 0.00 0.00 2.15
5277 5505 4.881273 TCATTAAAAGCATACACGCCTCAT 59.119 37.500 0.00 0.00 0.00 2.90
5278 5506 4.094294 GTCATTAAAAGCATACACGCCTCA 59.906 41.667 0.00 0.00 0.00 3.86
5279 5507 4.332819 AGTCATTAAAAGCATACACGCCTC 59.667 41.667 0.00 0.00 0.00 4.70
5280 5508 4.261801 AGTCATTAAAAGCATACACGCCT 58.738 39.130 0.00 0.00 0.00 5.52
5281 5509 4.616181 AGTCATTAAAAGCATACACGCC 57.384 40.909 0.00 0.00 0.00 5.68
5282 5510 5.627172 TGAAGTCATTAAAAGCATACACGC 58.373 37.500 0.00 0.00 0.00 5.34
5283 5511 6.955963 GTCTGAAGTCATTAAAAGCATACACG 59.044 38.462 0.00 0.00 0.00 4.49
5284 5512 8.034058 AGTCTGAAGTCATTAAAAGCATACAC 57.966 34.615 0.00 0.00 0.00 2.90
5285 5513 9.151471 GTAGTCTGAAGTCATTAAAAGCATACA 57.849 33.333 0.00 0.00 0.00 2.29
5286 5514 8.604890 GGTAGTCTGAAGTCATTAAAAGCATAC 58.395 37.037 0.00 0.00 0.00 2.39
5287 5515 8.318412 TGGTAGTCTGAAGTCATTAAAAGCATA 58.682 33.333 0.00 0.00 0.00 3.14
5288 5516 7.168219 TGGTAGTCTGAAGTCATTAAAAGCAT 58.832 34.615 0.00 0.00 0.00 3.79
5289 5517 6.530120 TGGTAGTCTGAAGTCATTAAAAGCA 58.470 36.000 0.00 0.00 0.00 3.91
5290 5518 7.435068 TTGGTAGTCTGAAGTCATTAAAAGC 57.565 36.000 0.00 0.00 0.00 3.51
5295 5523 9.817809 GTCATATTTGGTAGTCTGAAGTCATTA 57.182 33.333 0.00 0.00 0.00 1.90
5296 5524 8.321353 TGTCATATTTGGTAGTCTGAAGTCATT 58.679 33.333 0.00 0.00 0.00 2.57
5297 5525 7.851228 TGTCATATTTGGTAGTCTGAAGTCAT 58.149 34.615 0.00 0.00 0.00 3.06
5298 5526 7.239763 TGTCATATTTGGTAGTCTGAAGTCA 57.760 36.000 0.00 0.00 0.00 3.41
5299 5527 7.766278 ACATGTCATATTTGGTAGTCTGAAGTC 59.234 37.037 0.00 0.00 0.00 3.01
5300 5528 7.624549 ACATGTCATATTTGGTAGTCTGAAGT 58.375 34.615 0.00 0.00 0.00 3.01
5301 5529 9.254133 CTACATGTCATATTTGGTAGTCTGAAG 57.746 37.037 0.00 0.00 0.00 3.02
5302 5530 8.758829 ACTACATGTCATATTTGGTAGTCTGAA 58.241 33.333 0.00 0.00 37.47 3.02
5303 5531 8.197439 CACTACATGTCATATTTGGTAGTCTGA 58.803 37.037 0.00 0.00 39.34 3.27
5304 5532 8.197439 TCACTACATGTCATATTTGGTAGTCTG 58.803 37.037 0.00 2.60 39.34 3.51
5305 5533 8.306313 TCACTACATGTCATATTTGGTAGTCT 57.694 34.615 0.00 0.00 39.34 3.24
5306 5534 9.197694 GATCACTACATGTCATATTTGGTAGTC 57.802 37.037 0.00 0.00 39.34 2.59
5307 5535 8.704668 TGATCACTACATGTCATATTTGGTAGT 58.295 33.333 0.00 6.96 41.33 2.73
5308 5536 9.201127 CTGATCACTACATGTCATATTTGGTAG 57.799 37.037 0.00 5.97 35.53 3.18
5309 5537 8.704668 ACTGATCACTACATGTCATATTTGGTA 58.295 33.333 0.00 0.00 0.00 3.25
5310 5538 7.568349 ACTGATCACTACATGTCATATTTGGT 58.432 34.615 0.00 0.00 0.00 3.67
5311 5539 8.442632 AACTGATCACTACATGTCATATTTGG 57.557 34.615 0.00 0.00 0.00 3.28
5312 5540 9.712359 CAAACTGATCACTACATGTCATATTTG 57.288 33.333 0.00 3.96 0.00 2.32
5313 5541 9.453572 ACAAACTGATCACTACATGTCATATTT 57.546 29.630 0.00 0.00 0.00 1.40
5314 5542 9.453572 AACAAACTGATCACTACATGTCATATT 57.546 29.630 0.00 0.00 0.00 1.28
5315 5543 8.886719 CAACAAACTGATCACTACATGTCATAT 58.113 33.333 0.00 0.00 0.00 1.78
5316 5544 7.148423 GCAACAAACTGATCACTACATGTCATA 60.148 37.037 0.00 0.00 0.00 2.15
5317 5545 6.348786 GCAACAAACTGATCACTACATGTCAT 60.349 38.462 0.00 0.00 0.00 3.06
5318 5546 5.049474 GCAACAAACTGATCACTACATGTCA 60.049 40.000 0.00 0.00 0.00 3.58
5319 5547 5.049474 TGCAACAAACTGATCACTACATGTC 60.049 40.000 0.00 0.00 0.00 3.06
5320 5548 4.821260 TGCAACAAACTGATCACTACATGT 59.179 37.500 2.69 2.69 0.00 3.21
5321 5549 5.361135 TGCAACAAACTGATCACTACATG 57.639 39.130 0.00 0.00 0.00 3.21
5322 5550 5.620654 GCATGCAACAAACTGATCACTACAT 60.621 40.000 14.21 0.00 0.00 2.29
5323 5551 4.320421 GCATGCAACAAACTGATCACTACA 60.320 41.667 14.21 0.00 0.00 2.74
5324 5552 4.161333 GCATGCAACAAACTGATCACTAC 58.839 43.478 14.21 0.00 0.00 2.73
5325 5553 3.819902 TGCATGCAACAAACTGATCACTA 59.180 39.130 20.30 0.00 0.00 2.74
5326 5554 2.624364 TGCATGCAACAAACTGATCACT 59.376 40.909 20.30 0.00 0.00 3.41
5327 5555 3.015934 TGCATGCAACAAACTGATCAC 57.984 42.857 20.30 0.00 0.00 3.06
5328 5556 3.729862 TTGCATGCAACAAACTGATCA 57.270 38.095 28.80 2.25 0.00 2.92
5329 5557 3.369756 CCATTGCATGCAACAAACTGATC 59.630 43.478 34.10 0.00 38.88 2.92
5330 5558 3.244284 ACCATTGCATGCAACAAACTGAT 60.244 39.130 34.10 13.67 38.88 2.90
5331 5559 2.102757 ACCATTGCATGCAACAAACTGA 59.897 40.909 34.10 11.27 38.88 3.41
5332 5560 2.485903 ACCATTGCATGCAACAAACTG 58.514 42.857 34.10 25.83 38.88 3.16
5333 5561 2.914695 ACCATTGCATGCAACAAACT 57.085 40.000 34.10 16.31 38.88 2.66
5334 5562 6.718454 TTAATACCATTGCATGCAACAAAC 57.282 33.333 34.10 0.00 38.88 2.93
5335 5563 7.918536 AATTAATACCATTGCATGCAACAAA 57.081 28.000 34.10 19.89 38.88 2.83
5336 5564 7.224362 GCTAATTAATACCATTGCATGCAACAA 59.776 33.333 34.10 19.55 38.88 2.83
5337 5565 6.700960 GCTAATTAATACCATTGCATGCAACA 59.299 34.615 34.10 19.59 38.88 3.33
5338 5566 6.700960 TGCTAATTAATACCATTGCATGCAAC 59.299 34.615 34.10 16.61 38.88 4.17
5339 5567 6.814043 TGCTAATTAATACCATTGCATGCAA 58.186 32.000 33.57 33.57 40.47 4.08
5340 5568 6.402456 TGCTAATTAATACCATTGCATGCA 57.598 33.333 18.46 18.46 0.00 3.96
5341 5569 7.712264 TTTGCTAATTAATACCATTGCATGC 57.288 32.000 11.82 11.82 0.00 4.06
5378 5606 5.536161 CCAAGGTGGAGAGAGAAATGAAAAA 59.464 40.000 0.00 0.00 40.96 1.94
5379 5607 5.072741 CCAAGGTGGAGAGAGAAATGAAAA 58.927 41.667 0.00 0.00 40.96 2.29
5380 5608 4.104738 ACCAAGGTGGAGAGAGAAATGAAA 59.895 41.667 0.18 0.00 40.96 2.69
5381 5609 3.652869 ACCAAGGTGGAGAGAGAAATGAA 59.347 43.478 0.18 0.00 40.96 2.57
5382 5610 3.251484 ACCAAGGTGGAGAGAGAAATGA 58.749 45.455 0.18 0.00 40.96 2.57
5383 5611 3.710209 ACCAAGGTGGAGAGAGAAATG 57.290 47.619 0.18 0.00 40.96 2.32
5384 5612 3.812167 GCAACCAAGGTGGAGAGAGAAAT 60.812 47.826 0.18 0.00 40.96 2.17
5385 5613 2.487265 GCAACCAAGGTGGAGAGAGAAA 60.487 50.000 0.18 0.00 40.96 2.52
5386 5614 1.072331 GCAACCAAGGTGGAGAGAGAA 59.928 52.381 0.18 0.00 40.96 2.87
5387 5615 0.687354 GCAACCAAGGTGGAGAGAGA 59.313 55.000 0.18 0.00 40.96 3.10
5388 5616 0.671781 CGCAACCAAGGTGGAGAGAG 60.672 60.000 0.18 0.00 40.96 3.20
5389 5617 1.371183 CGCAACCAAGGTGGAGAGA 59.629 57.895 0.18 0.00 40.96 3.10
5390 5618 1.672356 CCGCAACCAAGGTGGAGAG 60.672 63.158 0.18 0.00 40.96 3.20
5391 5619 2.429930 CCGCAACCAAGGTGGAGA 59.570 61.111 0.18 0.00 40.96 3.71
5392 5620 2.113139 ACCGCAACCAAGGTGGAG 59.887 61.111 0.18 0.00 40.96 3.86
5396 5624 3.216292 GTGCACCGCAACCAAGGT 61.216 61.111 5.22 0.00 41.47 3.50
5397 5625 2.780094 TTGTGCACCGCAACCAAGG 61.780 57.895 15.69 0.00 41.47 3.61
5398 5626 1.588667 GTTGTGCACCGCAACCAAG 60.589 57.895 15.69 0.00 45.56 3.61
5399 5627 2.492090 GTTGTGCACCGCAACCAA 59.508 55.556 15.69 0.00 45.56 3.67
5407 5635 2.421361 CACCACCTTAGGTTGTGCACC 61.421 57.143 20.25 0.00 41.27 5.01
5408 5636 0.951558 CACCACCTTAGGTTGTGCAC 59.048 55.000 20.25 10.75 41.27 4.57
5409 5637 3.412722 CACCACCTTAGGTTGTGCA 57.587 52.632 20.25 0.00 41.27 4.57
5412 5640 2.024751 ACCAAACACCACCTTAGGTTGT 60.025 45.455 0.00 0.60 40.77 3.32
5413 5641 2.661718 ACCAAACACCACCTTAGGTTG 58.338 47.619 0.00 0.00 40.77 3.77
5414 5642 3.053170 AGAACCAAACACCACCTTAGGTT 60.053 43.478 0.00 0.00 40.77 3.50
5415 5643 2.512476 AGAACCAAACACCACCTTAGGT 59.488 45.455 0.00 0.00 44.48 3.08
5416 5644 3.146847 GAGAACCAAACACCACCTTAGG 58.853 50.000 0.00 0.00 0.00 2.69
5417 5645 4.086706 AGAGAACCAAACACCACCTTAG 57.913 45.455 0.00 0.00 0.00 2.18
5418 5646 4.657039 ACTAGAGAACCAAACACCACCTTA 59.343 41.667 0.00 0.00 0.00 2.69
5419 5647 3.458487 ACTAGAGAACCAAACACCACCTT 59.542 43.478 0.00 0.00 0.00 3.50
5420 5648 3.046374 ACTAGAGAACCAAACACCACCT 58.954 45.455 0.00 0.00 0.00 4.00
5421 5649 3.400255 GACTAGAGAACCAAACACCACC 58.600 50.000 0.00 0.00 0.00 4.61
5422 5650 3.071167 AGGACTAGAGAACCAAACACCAC 59.929 47.826 0.00 0.00 0.00 4.16
5423 5651 3.314693 AGGACTAGAGAACCAAACACCA 58.685 45.455 0.00 0.00 0.00 4.17
5424 5652 4.081586 CCTAGGACTAGAGAACCAAACACC 60.082 50.000 1.05 0.00 35.21 4.16
5425 5653 4.771054 TCCTAGGACTAGAGAACCAAACAC 59.229 45.833 7.62 0.00 35.21 3.32
5426 5654 4.771054 GTCCTAGGACTAGAGAACCAAACA 59.229 45.833 31.12 0.00 41.57 2.83
5427 5655 5.327616 GTCCTAGGACTAGAGAACCAAAC 57.672 47.826 31.12 3.26 41.57 2.93
5449 5677 9.692749 GGACTTTTTAATTGGGACTAGAAAAAG 57.307 33.333 15.05 15.05 44.04 2.27
5450 5678 8.644216 GGGACTTTTTAATTGGGACTAGAAAAA 58.356 33.333 0.00 0.00 0.00 1.94
5451 5679 8.008332 AGGGACTTTTTAATTGGGACTAGAAAA 58.992 33.333 0.00 0.00 27.25 2.29
5452 5680 7.532199 AGGGACTTTTTAATTGGGACTAGAAA 58.468 34.615 0.00 0.00 27.25 2.52
5453 5681 7.098845 AGGGACTTTTTAATTGGGACTAGAA 57.901 36.000 0.00 0.00 27.25 2.10
5454 5682 6.296836 GGAGGGACTTTTTAATTGGGACTAGA 60.297 42.308 0.00 0.00 41.55 2.43
5455 5683 5.886474 GGAGGGACTTTTTAATTGGGACTAG 59.114 44.000 0.00 0.00 41.55 2.57
5456 5684 5.281349 GGGAGGGACTTTTTAATTGGGACTA 60.281 44.000 0.00 0.00 41.55 2.59
5457 5685 4.510386 GGGAGGGACTTTTTAATTGGGACT 60.510 45.833 0.00 0.00 41.55 3.85
5458 5686 3.767673 GGGAGGGACTTTTTAATTGGGAC 59.232 47.826 0.00 0.00 41.55 4.46
5459 5687 3.665618 AGGGAGGGACTTTTTAATTGGGA 59.334 43.478 0.00 0.00 41.55 4.37
5460 5688 3.769300 CAGGGAGGGACTTTTTAATTGGG 59.231 47.826 0.00 0.00 41.55 4.12
5461 5689 4.416516 ACAGGGAGGGACTTTTTAATTGG 58.583 43.478 0.00 0.00 41.55 3.16
5462 5690 6.183360 ACAAACAGGGAGGGACTTTTTAATTG 60.183 38.462 0.00 0.00 41.55 2.32
5463 5691 5.903010 ACAAACAGGGAGGGACTTTTTAATT 59.097 36.000 0.00 0.00 41.55 1.40
5464 5692 5.464069 ACAAACAGGGAGGGACTTTTTAAT 58.536 37.500 0.00 0.00 41.55 1.40
5465 5693 4.874199 ACAAACAGGGAGGGACTTTTTAA 58.126 39.130 0.00 0.00 41.55 1.52
5466 5694 4.529716 ACAAACAGGGAGGGACTTTTTA 57.470 40.909 0.00 0.00 41.55 1.52
5467 5695 3.398318 ACAAACAGGGAGGGACTTTTT 57.602 42.857 0.00 0.00 41.55 1.94
5468 5696 3.398318 AACAAACAGGGAGGGACTTTT 57.602 42.857 0.00 0.00 41.55 2.27
5469 5697 3.398318 AAACAAACAGGGAGGGACTTT 57.602 42.857 0.00 0.00 41.55 2.66
5470 5698 3.398318 AAAACAAACAGGGAGGGACTT 57.602 42.857 0.00 0.00 41.55 3.01
5471 5699 4.816264 TTGAAAAACAAACAGGGAGGGACT 60.816 41.667 0.00 0.00 37.07 3.85
5472 5700 3.028130 TGAAAAACAAACAGGGAGGGAC 58.972 45.455 0.00 0.00 0.00 4.46
5473 5701 3.390175 TGAAAAACAAACAGGGAGGGA 57.610 42.857 0.00 0.00 0.00 4.20
5474 5702 3.704061 TCTTGAAAAACAAACAGGGAGGG 59.296 43.478 0.00 0.00 38.08 4.30
5475 5703 4.402474 AGTCTTGAAAAACAAACAGGGAGG 59.598 41.667 0.00 0.00 38.08 4.30
5476 5704 5.582689 AGTCTTGAAAAACAAACAGGGAG 57.417 39.130 0.00 0.00 38.08 4.30
5477 5705 7.469537 TTTAGTCTTGAAAAACAAACAGGGA 57.530 32.000 0.00 0.00 38.08 4.20
5478 5706 8.541133 TTTTTAGTCTTGAAAAACAAACAGGG 57.459 30.769 0.00 0.00 38.08 4.45
5479 5707 9.203421 ACTTTTTAGTCTTGAAAAACAAACAGG 57.797 29.630 0.00 0.00 38.08 4.00
5481 5709 9.974980 AGACTTTTTAGTCTTGAAAAACAAACA 57.025 25.926 2.08 0.00 45.94 2.83
5495 5723 7.853299 AGGAAGGGAATAGAGACTTTTTAGTC 58.147 38.462 0.00 0.00 39.00 2.59
5496 5724 7.816300 AGGAAGGGAATAGAGACTTTTTAGT 57.184 36.000 0.00 0.00 0.00 2.24
5497 5725 9.203163 TCTAGGAAGGGAATAGAGACTTTTTAG 57.797 37.037 0.00 0.00 0.00 1.85
5498 5726 9.203163 CTCTAGGAAGGGAATAGAGACTTTTTA 57.797 37.037 2.95 0.00 43.40 1.52
5499 5727 7.126573 CCTCTAGGAAGGGAATAGAGACTTTTT 59.873 40.741 9.47 0.00 43.40 1.94
5500 5728 6.613679 CCTCTAGGAAGGGAATAGAGACTTTT 59.386 42.308 9.47 0.00 43.40 2.27
5501 5729 6.140377 CCTCTAGGAAGGGAATAGAGACTTT 58.860 44.000 9.47 0.00 43.40 2.66
5502 5730 5.196984 ACCTCTAGGAAGGGAATAGAGACTT 59.803 44.000 2.23 0.00 43.40 3.01
5503 5731 4.735020 ACCTCTAGGAAGGGAATAGAGACT 59.265 45.833 2.23 0.00 43.40 3.24
5504 5732 5.069518 ACCTCTAGGAAGGGAATAGAGAC 57.930 47.826 2.23 0.00 43.40 3.36
5505 5733 5.752864 AACCTCTAGGAAGGGAATAGAGA 57.247 43.478 2.23 0.00 43.40 3.10
5506 5734 9.603189 TTAATAACCTCTAGGAAGGGAATAGAG 57.397 37.037 2.23 0.00 41.04 2.43
5507 5735 9.962835 TTTAATAACCTCTAGGAAGGGAATAGA 57.037 33.333 2.23 0.00 41.04 1.98
5525 5753 9.744468 CTAAGGGCAACATGGTTATTTAATAAC 57.256 33.333 16.90 16.90 40.93 1.89
5526 5754 9.482175 ACTAAGGGCAACATGGTTATTTAATAA 57.518 29.630 0.00 0.00 39.74 1.40
5528 5756 7.971368 ACTAAGGGCAACATGGTTATTTAAT 57.029 32.000 0.00 0.00 39.74 1.40
5532 5760 9.959721 CTATATACTAAGGGCAACATGGTTATT 57.040 33.333 0.00 0.00 39.74 1.40
5533 5761 9.333961 TCTATATACTAAGGGCAACATGGTTAT 57.666 33.333 0.00 0.00 39.74 1.89
5534 5762 8.730093 TCTATATACTAAGGGCAACATGGTTA 57.270 34.615 0.00 0.00 39.74 2.85
5535 5763 7.626999 TCTATATACTAAGGGCAACATGGTT 57.373 36.000 0.00 0.00 39.74 3.67
5536 5764 7.626999 TTCTATATACTAAGGGCAACATGGT 57.373 36.000 0.00 0.00 39.74 3.55
5537 5765 8.918202 TTTTCTATATACTAAGGGCAACATGG 57.082 34.615 0.00 0.00 39.74 3.66
5557 5785 9.612066 ATGGTGTTGTTTGATTGTTATTTTTCT 57.388 25.926 0.00 0.00 0.00 2.52
5558 5786 9.649024 CATGGTGTTGTTTGATTGTTATTTTTC 57.351 29.630 0.00 0.00 0.00 2.29
5559 5787 8.619546 CCATGGTGTTGTTTGATTGTTATTTTT 58.380 29.630 2.57 0.00 0.00 1.94
5560 5788 7.228308 CCCATGGTGTTGTTTGATTGTTATTTT 59.772 33.333 11.73 0.00 0.00 1.82
5561 5789 6.709846 CCCATGGTGTTGTTTGATTGTTATTT 59.290 34.615 11.73 0.00 0.00 1.40
5562 5790 6.229733 CCCATGGTGTTGTTTGATTGTTATT 58.770 36.000 11.73 0.00 0.00 1.40
5563 5791 5.279910 CCCCATGGTGTTGTTTGATTGTTAT 60.280 40.000 11.73 0.00 0.00 1.89
5564 5792 4.039730 CCCCATGGTGTTGTTTGATTGTTA 59.960 41.667 11.73 0.00 0.00 2.41
5565 5793 3.181456 CCCCATGGTGTTGTTTGATTGTT 60.181 43.478 11.73 0.00 0.00 2.83
5566 5794 2.368221 CCCCATGGTGTTGTTTGATTGT 59.632 45.455 11.73 0.00 0.00 2.71
5567 5795 2.368221 ACCCCATGGTGTTGTTTGATTG 59.632 45.455 11.73 0.00 45.58 2.67
5568 5796 2.688477 ACCCCATGGTGTTGTTTGATT 58.312 42.857 11.73 0.00 45.58 2.57
5569 5797 2.397044 ACCCCATGGTGTTGTTTGAT 57.603 45.000 11.73 0.00 45.58 2.57
5570 5798 3.935371 ACCCCATGGTGTTGTTTGA 57.065 47.368 11.73 0.00 45.58 2.69
5591 5819 3.840594 CATGCACCCATTGGCCCG 61.841 66.667 0.00 0.00 33.59 6.13
5592 5820 3.472726 CCATGCACCCATTGGCCC 61.473 66.667 0.00 0.00 33.59 5.80
5593 5821 2.364056 TCCATGCACCCATTGGCC 60.364 61.111 0.00 0.00 33.59 5.36
5594 5822 2.428925 CCTCCATGCACCCATTGGC 61.429 63.158 0.00 0.00 33.59 4.52
5595 5823 1.759299 CCCTCCATGCACCCATTGG 60.759 63.158 0.00 0.00 37.80 3.16
5596 5824 1.759299 CCCCTCCATGCACCCATTG 60.759 63.158 0.00 0.00 0.00 2.82
5597 5825 2.691732 CCCCTCCATGCACCCATT 59.308 61.111 0.00 0.00 0.00 3.16
5598 5826 4.147587 GCCCCTCCATGCACCCAT 62.148 66.667 0.00 0.00 0.00 4.00
5600 5828 3.684369 AATGCCCCTCCATGCACCC 62.684 63.158 0.00 0.00 40.88 4.61
5601 5829 2.042639 AATGCCCCTCCATGCACC 60.043 61.111 0.00 0.00 40.88 5.01
5602 5830 1.259840 AACAATGCCCCTCCATGCAC 61.260 55.000 0.00 0.00 40.88 4.57
5603 5831 1.078891 AACAATGCCCCTCCATGCA 59.921 52.632 0.00 0.00 42.52 3.96
5604 5832 1.518774 CAACAATGCCCCTCCATGC 59.481 57.895 0.00 0.00 0.00 4.06
5605 5833 0.324552 TCCAACAATGCCCCTCCATG 60.325 55.000 0.00 0.00 0.00 3.66
5606 5834 0.413037 TTCCAACAATGCCCCTCCAT 59.587 50.000 0.00 0.00 0.00 3.41
5607 5835 0.189574 TTTCCAACAATGCCCCTCCA 59.810 50.000 0.00 0.00 0.00 3.86
5608 5836 1.276138 CTTTTCCAACAATGCCCCTCC 59.724 52.381 0.00 0.00 0.00 4.30
5609 5837 1.970640 ACTTTTCCAACAATGCCCCTC 59.029 47.619 0.00 0.00 0.00 4.30
5610 5838 1.970640 GACTTTTCCAACAATGCCCCT 59.029 47.619 0.00 0.00 0.00 4.79
5611 5839 1.970640 AGACTTTTCCAACAATGCCCC 59.029 47.619 0.00 0.00 0.00 5.80
5612 5840 2.627699 TGAGACTTTTCCAACAATGCCC 59.372 45.455 0.00 0.00 0.00 5.36
5613 5841 4.320608 TTGAGACTTTTCCAACAATGCC 57.679 40.909 0.00 0.00 0.00 4.40
5614 5842 6.313658 ACTTTTTGAGACTTTTCCAACAATGC 59.686 34.615 0.00 0.00 0.00 3.56
5615 5843 7.010460 GGACTTTTTGAGACTTTTCCAACAATG 59.990 37.037 0.00 0.00 0.00 2.82
5616 5844 7.041721 GGACTTTTTGAGACTTTTCCAACAAT 58.958 34.615 0.00 0.00 0.00 2.71
5617 5845 6.394809 GGACTTTTTGAGACTTTTCCAACAA 58.605 36.000 0.00 0.00 0.00 2.83
5618 5846 5.105513 GGGACTTTTTGAGACTTTTCCAACA 60.106 40.000 0.00 0.00 0.00 3.33
5619 5847 5.105513 TGGGACTTTTTGAGACTTTTCCAAC 60.106 40.000 0.00 0.00 0.00 3.77
5620 5848 5.020132 TGGGACTTTTTGAGACTTTTCCAA 58.980 37.500 0.00 0.00 0.00 3.53
5621 5849 4.605183 TGGGACTTTTTGAGACTTTTCCA 58.395 39.130 0.00 0.00 0.00 3.53
5622 5850 5.592104 TTGGGACTTTTTGAGACTTTTCC 57.408 39.130 0.00 0.00 0.00 3.13
5623 5851 7.817478 TCTTTTTGGGACTTTTTGAGACTTTTC 59.183 33.333 0.00 0.00 0.00 2.29
5624 5852 7.602644 GTCTTTTTGGGACTTTTTGAGACTTTT 59.397 33.333 0.00 0.00 0.00 2.27
5625 5853 7.039011 AGTCTTTTTGGGACTTTTTGAGACTTT 60.039 33.333 0.00 0.00 40.65 2.66
5626 5854 6.437477 AGTCTTTTTGGGACTTTTTGAGACTT 59.563 34.615 0.00 0.00 40.65 3.01
5627 5855 5.952347 AGTCTTTTTGGGACTTTTTGAGACT 59.048 36.000 0.00 0.00 40.65 3.24
5628 5856 6.208988 AGTCTTTTTGGGACTTTTTGAGAC 57.791 37.500 0.00 0.00 40.65 3.36
5629 5857 5.359860 GGAGTCTTTTTGGGACTTTTTGAGA 59.640 40.000 0.00 0.00 43.13 3.27
5630 5858 5.360999 AGGAGTCTTTTTGGGACTTTTTGAG 59.639 40.000 0.00 0.00 43.13 3.02
5631 5859 5.269189 AGGAGTCTTTTTGGGACTTTTTGA 58.731 37.500 0.00 0.00 43.13 2.69
5632 5860 5.598416 AGGAGTCTTTTTGGGACTTTTTG 57.402 39.130 0.00 0.00 43.13 2.44
5633 5861 7.618117 TCTTAAGGAGTCTTTTTGGGACTTTTT 59.382 33.333 1.85 0.00 43.13 1.94
5634 5862 7.123383 TCTTAAGGAGTCTTTTTGGGACTTTT 58.877 34.615 1.85 0.00 43.13 2.27
5635 5863 6.669631 TCTTAAGGAGTCTTTTTGGGACTTT 58.330 36.000 1.85 0.00 43.13 2.66
5636 5864 6.262056 TCTTAAGGAGTCTTTTTGGGACTT 57.738 37.500 1.85 0.00 43.13 3.01
5637 5865 5.870706 CTCTTAAGGAGTCTTTTTGGGACT 58.129 41.667 1.85 0.00 45.37 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.