Multiple sequence alignment - TraesCS1A01G211700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G211700 chr1A 100.000 3252 0 0 1 3252 374219107 374222358 0.000000e+00 6006
1 TraesCS1A01G211700 chr1A 96.809 376 12 0 2877 3252 374237247 374237622 2.130000e-176 628
2 TraesCS1A01G211700 chr1D 92.658 967 57 6 1335 2300 299968991 299969944 0.000000e+00 1380
3 TraesCS1A01G211700 chr1D 90.220 818 62 6 1 815 299931616 299932418 0.000000e+00 1051
4 TraesCS1A01G211700 chr1D 92.505 467 31 3 860 1325 299932440 299932903 0.000000e+00 665
5 TraesCS1A01G211700 chr1D 88.766 543 42 12 2341 2879 299969953 299970480 0.000000e+00 647
6 TraesCS1A01G211700 chr7A 97.067 375 10 1 2879 3252 343852193 343852567 5.920000e-177 630
7 TraesCS1A01G211700 chr5A 97.051 373 11 0 2880 3252 141951208 141951580 2.130000e-176 628
8 TraesCS1A01G211700 chr5A 95.652 391 14 3 2864 3252 543331757 543331368 2.750000e-175 625
9 TraesCS1A01G211700 chr5A 96.533 375 13 0 2878 3252 366540527 366540153 3.560000e-174 621
10 TraesCS1A01G211700 chr4A 97.051 373 11 0 2880 3252 96047679 96047307 2.130000e-176 628
11 TraesCS1A01G211700 chr4A 96.817 377 11 1 2877 3252 613432336 613432712 2.130000e-176 628
12 TraesCS1A01G211700 chr4A 76.451 603 103 22 1419 2011 684511300 684511873 1.140000e-74 291
13 TraesCS1A01G211700 chr3A 97.051 373 11 0 2880 3252 72496052 72496424 2.130000e-176 628
14 TraesCS1A01G211700 chr3A 76.853 769 160 16 1230 1990 731850232 731850990 5.020000e-113 418
15 TraesCS1A01G211700 chr2A 97.059 374 10 1 2880 3252 180118997 180118624 2.130000e-176 628
16 TraesCS1A01G211700 chr2A 75.685 913 178 23 1160 2046 573426760 573427654 1.800000e-112 416
17 TraesCS1A01G211700 chr6D 76.264 1108 217 40 1225 2313 42546133 42547213 6.130000e-152 547
18 TraesCS1A01G211700 chr6D 79.620 368 59 8 1227 1593 436313201 436312849 1.940000e-62 250
19 TraesCS1A01G211700 chr3B 75.554 1084 208 34 1230 2272 809459312 809460379 6.310000e-132 481
20 TraesCS1A01G211700 chr3B 77.135 726 150 9 1268 1989 809498849 809499562 1.090000e-109 407
21 TraesCS1A01G211700 chr2D 75.905 884 172 27 1138 1998 79414617 79415482 6.490000e-112 414
22 TraesCS1A01G211700 chr2D 75.433 924 179 26 1160 2055 416754517 416753614 3.910000e-109 405
23 TraesCS1A01G211700 chr6A 79.891 368 56 11 1227 1593 583390739 583390389 1.500000e-63 254
24 TraesCS1A01G211700 chr4D 84.906 106 16 0 1983 2088 477587092 477587197 1.230000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G211700 chr1A 374219107 374222358 3251 False 6006.0 6006 100.0000 1 3252 1 chr1A.!!$F1 3251
1 TraesCS1A01G211700 chr1D 299968991 299970480 1489 False 1013.5 1380 90.7120 1335 2879 2 chr1D.!!$F2 1544
2 TraesCS1A01G211700 chr1D 299931616 299932903 1287 False 858.0 1051 91.3625 1 1325 2 chr1D.!!$F1 1324
3 TraesCS1A01G211700 chr4A 684511300 684511873 573 False 291.0 291 76.4510 1419 2011 1 chr4A.!!$F2 592
4 TraesCS1A01G211700 chr3A 731850232 731850990 758 False 418.0 418 76.8530 1230 1990 1 chr3A.!!$F2 760
5 TraesCS1A01G211700 chr2A 573426760 573427654 894 False 416.0 416 75.6850 1160 2046 1 chr2A.!!$F1 886
6 TraesCS1A01G211700 chr6D 42546133 42547213 1080 False 547.0 547 76.2640 1225 2313 1 chr6D.!!$F1 1088
7 TraesCS1A01G211700 chr3B 809459312 809460379 1067 False 481.0 481 75.5540 1230 2272 1 chr3B.!!$F1 1042
8 TraesCS1A01G211700 chr3B 809498849 809499562 713 False 407.0 407 77.1350 1268 1989 1 chr3B.!!$F2 721
9 TraesCS1A01G211700 chr2D 79414617 79415482 865 False 414.0 414 75.9050 1138 1998 1 chr2D.!!$F1 860
10 TraesCS1A01G211700 chr2D 416753614 416754517 903 True 405.0 405 75.4330 1160 2055 1 chr2D.!!$R1 895

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 705 0.181587 ACCAACCATCGTTGTGGACA 59.818 50.0 9.45 0.0 46.71 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2433 2534 0.035056 CTACTTGGGGTTGGCCTGAG 60.035 60.0 3.32 0.0 34.45 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 3.825611 GCGGTTGCCATGGCGAAT 61.826 61.111 28.68 0.00 45.51 3.34
166 167 1.112315 AGGGGCAGTGCGATAGAGAG 61.112 60.000 9.45 0.00 39.76 3.20
167 168 1.109920 GGGGCAGTGCGATAGAGAGA 61.110 60.000 9.45 0.00 39.76 3.10
192 194 3.405823 CCATTTTGTGGCTGGATTTGT 57.594 42.857 0.00 0.00 42.12 2.83
267 269 2.267961 GTCACCTGGGCCCGTTAG 59.732 66.667 19.37 9.24 0.00 2.34
271 273 4.832608 CCTGGGCCCGTTAGCGTC 62.833 72.222 19.37 0.00 36.15 5.19
287 289 2.738521 TCGGCTCACTTTGCTCGC 60.739 61.111 0.00 0.00 0.00 5.03
319 321 2.009774 AGCACGATCAAGGCATACAAC 58.990 47.619 0.00 0.00 0.00 3.32
320 322 1.737236 GCACGATCAAGGCATACAACA 59.263 47.619 0.00 0.00 0.00 3.33
336 339 3.278574 ACAACAGCACAACTTGAGCTAA 58.721 40.909 12.66 0.00 42.27 3.09
337 340 3.694072 ACAACAGCACAACTTGAGCTAAA 59.306 39.130 12.66 0.00 42.27 1.85
338 341 4.157656 ACAACAGCACAACTTGAGCTAAAA 59.842 37.500 12.66 0.00 42.27 1.52
339 342 4.981806 ACAGCACAACTTGAGCTAAAAA 57.018 36.364 12.66 0.00 42.27 1.94
358 361 4.535526 AAAACACACCAGACTTTGCTTT 57.464 36.364 0.00 0.00 0.00 3.51
368 371 4.046462 CAGACTTTGCTTTGTTCACCATG 58.954 43.478 0.00 0.00 0.00 3.66
376 379 3.243839 GCTTTGTTCACCATGTGTCCATT 60.244 43.478 0.00 0.00 34.79 3.16
381 384 0.612732 CACCATGTGTCCATTGCCCT 60.613 55.000 0.00 0.00 0.00 5.19
445 448 8.463607 GCTACAGGAGTGATATATTTAGGTCTC 58.536 40.741 0.00 0.00 0.00 3.36
473 476 3.783943 CACAAGACAAAAGACGAAAACCG 59.216 43.478 0.00 0.00 45.44 4.44
503 507 1.488705 AACCCAACCGCCAGATCTGA 61.489 55.000 24.62 0.00 0.00 3.27
515 519 2.754552 CCAGATCTGAAATTTTCCGCCA 59.245 45.455 24.62 0.00 0.00 5.69
516 520 3.382546 CCAGATCTGAAATTTTCCGCCAT 59.617 43.478 24.62 0.00 0.00 4.40
524 528 0.251564 ATTTTCCGCCATGACCACCA 60.252 50.000 0.00 0.00 0.00 4.17
531 535 2.032634 CCATGACCACCAACGACCG 61.033 63.158 0.00 0.00 0.00 4.79
586 590 2.368594 CCTCCTGTAGCCTCCCCA 59.631 66.667 0.00 0.00 0.00 4.96
587 591 1.074167 CCTCCTGTAGCCTCCCCAT 60.074 63.158 0.00 0.00 0.00 4.00
589 593 1.457643 TCCTGTAGCCTCCCCATCG 60.458 63.158 0.00 0.00 0.00 3.84
595 599 4.530857 GCCTCCCCATCGTGACCG 62.531 72.222 0.00 0.00 0.00 4.79
596 600 4.530857 CCTCCCCATCGTGACCGC 62.531 72.222 0.00 0.00 0.00 5.68
625 629 3.311110 TCGCCCCTCTCGTGCTTT 61.311 61.111 0.00 0.00 0.00 3.51
630 634 2.657237 CCTCTCGTGCTTTCCCGT 59.343 61.111 0.00 0.00 0.00 5.28
633 637 2.049433 CTCGTGCTTTCCCGTCGT 60.049 61.111 0.00 0.00 0.00 4.34
635 639 2.355363 CGTGCTTTCCCGTCGTCA 60.355 61.111 0.00 0.00 0.00 4.35
644 648 3.733960 CCGTCGTCAGTGCCGAGA 61.734 66.667 0.00 0.00 34.56 4.04
649 653 2.343758 GTCAGTGCCGAGAAGCCA 59.656 61.111 0.00 0.00 0.00 4.75
654 658 1.600916 GTGCCGAGAAGCCAAAGGT 60.601 57.895 0.00 0.00 0.00 3.50
655 659 1.150536 TGCCGAGAAGCCAAAGGTT 59.849 52.632 0.00 0.00 36.10 3.50
660 664 1.813862 CGAGAAGCCAAAGGTTGTCCA 60.814 52.381 0.00 0.00 39.84 4.02
690 694 0.540365 CTTGGACTGCCACCAACCAT 60.540 55.000 0.00 0.00 45.94 3.55
693 697 1.302511 GACTGCCACCAACCATCGT 60.303 57.895 0.00 0.00 0.00 3.73
694 698 0.889186 GACTGCCACCAACCATCGTT 60.889 55.000 0.00 0.00 0.00 3.85
699 703 0.536233 CCACCAACCATCGTTGTGGA 60.536 55.000 14.90 0.00 46.71 4.02
701 705 0.181587 ACCAACCATCGTTGTGGACA 59.818 50.000 9.45 0.00 46.71 4.02
723 727 4.180496 CGAAGCGTTGTAGGACCC 57.820 61.111 0.00 0.00 0.00 4.46
725 729 1.675219 GAAGCGTTGTAGGACCCCA 59.325 57.895 0.00 0.00 0.00 4.96
738 742 4.382541 CCCCACCAAGGCTTCCCC 62.383 72.222 0.00 0.00 35.39 4.81
769 773 1.040339 AGCTGACTAGGAAGAGGCCG 61.040 60.000 0.00 0.00 0.00 6.13
796 800 3.762247 CCATTGGCCAGGGTTGCG 61.762 66.667 15.59 0.00 0.00 4.85
815 819 2.548067 GCGACCCACAAGAAGAAGAAGA 60.548 50.000 0.00 0.00 0.00 2.87
816 820 3.728845 CGACCCACAAGAAGAAGAAGAA 58.271 45.455 0.00 0.00 0.00 2.52
817 821 3.743396 CGACCCACAAGAAGAAGAAGAAG 59.257 47.826 0.00 0.00 0.00 2.85
819 823 5.368989 GACCCACAAGAAGAAGAAGAAGAA 58.631 41.667 0.00 0.00 0.00 2.52
820 824 5.372373 ACCCACAAGAAGAAGAAGAAGAAG 58.628 41.667 0.00 0.00 0.00 2.85
822 826 6.058183 CCCACAAGAAGAAGAAGAAGAAGAA 58.942 40.000 0.00 0.00 0.00 2.52
823 827 6.204495 CCCACAAGAAGAAGAAGAAGAAGAAG 59.796 42.308 0.00 0.00 0.00 2.85
824 828 6.989169 CCACAAGAAGAAGAAGAAGAAGAAGA 59.011 38.462 0.00 0.00 0.00 2.87
825 829 7.497249 CCACAAGAAGAAGAAGAAGAAGAAGAA 59.503 37.037 0.00 0.00 0.00 2.52
830 834 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
831 835 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
832 836 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
833 837 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
834 838 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
835 839 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
836 840 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
837 841 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
838 842 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
839 843 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
840 844 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
841 845 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
842 846 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
843 847 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
844 848 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
845 849 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
846 850 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
847 851 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
848 852 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
849 853 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
850 854 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
851 855 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
852 856 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
853 857 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
854 858 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
855 859 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
856 860 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
857 861 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
858 862 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
876 880 3.233980 CCATCGGCGATCCCTCCA 61.234 66.667 21.25 0.00 0.00 3.86
883 887 3.014085 GCGATCCCTCCAACCACGA 62.014 63.158 0.00 0.00 0.00 4.35
942 947 1.524621 CCTCCCACTGCCGCATAAG 60.525 63.158 0.00 0.00 0.00 1.73
973 978 0.250124 GTCACCCATCGTCACAACCA 60.250 55.000 0.00 0.00 0.00 3.67
977 982 0.536233 CCCATCGTCACAACCACCAA 60.536 55.000 0.00 0.00 0.00 3.67
1003 1008 3.306225 CCCCAATGTGTTCAGTGAAATGG 60.306 47.826 7.25 10.69 41.41 3.16
1060 1065 8.070034 TCTATGATTTTCATGTGCCTTTTCAT 57.930 30.769 0.30 0.00 37.70 2.57
1066 1071 8.674263 ATTTTCATGTGCCTTTTCATTTTGTA 57.326 26.923 0.00 0.00 0.00 2.41
1103 1108 5.042593 GTGATGTGCATGTCTTTTGTTCAA 58.957 37.500 0.00 0.00 0.00 2.69
1110 1115 7.280428 TGTGCATGTCTTTTGTTCAAATTTGAT 59.720 29.630 21.10 0.00 37.00 2.57
1131 1136 7.307131 TGATGTATGTAGTGTGGATGATGAT 57.693 36.000 0.00 0.00 0.00 2.45
1495 1521 3.998341 GTGGTACAAGTGCCGAAGATAAA 59.002 43.478 2.92 0.00 44.16 1.40
1631 1662 3.576550 GCCAACCAAAATACAAGGGAAGA 59.423 43.478 0.00 0.00 0.00 2.87
1634 1665 3.431415 ACCAAAATACAAGGGAAGAGGC 58.569 45.455 0.00 0.00 0.00 4.70
1710 1741 3.775316 GAGGAGAATAGGAAGAACCCACA 59.225 47.826 0.00 0.00 40.05 4.17
1767 1798 2.441410 TCTTGGTTGGCGATGCAATAA 58.559 42.857 0.00 0.00 0.00 1.40
1779 1811 4.554973 GCGATGCAATAAAAGTTGACACTC 59.445 41.667 0.00 0.00 30.45 3.51
1816 1850 5.310409 AGTGTTGAGGATGGAAAGAGAAA 57.690 39.130 0.00 0.00 0.00 2.52
1843 1880 3.149196 CACCCAACTCAGTTGCTAACAT 58.851 45.455 12.49 0.00 41.62 2.71
1998 2062 1.022903 ATGGAGGAGAGAAGGGAGGT 58.977 55.000 0.00 0.00 0.00 3.85
1999 2063 0.793617 TGGAGGAGAGAAGGGAGGTT 59.206 55.000 0.00 0.00 0.00 3.50
2015 2079 0.108567 GGTTGAGGAGAGGAGAACGC 60.109 60.000 0.00 0.00 0.00 4.84
2029 2093 0.319641 GAACGCCGACCAAGAAGAGT 60.320 55.000 0.00 0.00 0.00 3.24
2035 2099 1.187087 CGACCAAGAAGAGTAGGGCT 58.813 55.000 0.00 0.00 0.00 5.19
2092 2157 2.847327 TCAAGAGCTTGGAAGTGAGG 57.153 50.000 10.09 0.00 40.78 3.86
2140 2206 6.825610 AGTGATCTTGATGAGAAGGGAATAC 58.174 40.000 0.00 0.00 38.06 1.89
2166 2232 7.699391 CCATACTTTGAACTTATGCACATTCAG 59.301 37.037 0.00 0.00 32.90 3.02
2207 2305 2.368875 TGTGAGACTTCTTGGGAGGTTC 59.631 50.000 0.00 0.00 31.79 3.62
2209 2307 0.977395 AGACTTCTTGGGAGGTTCGG 59.023 55.000 0.00 0.00 31.79 4.30
2313 2414 2.945008 GCAAGCACTAGTGATGGCAATA 59.055 45.455 30.87 0.00 44.79 1.90
2314 2415 3.003068 GCAAGCACTAGTGATGGCAATAG 59.997 47.826 30.87 9.85 44.79 1.73
2316 2417 4.333913 AGCACTAGTGATGGCAATAGAG 57.666 45.455 27.08 1.28 43.46 2.43
2317 2418 3.070734 AGCACTAGTGATGGCAATAGAGG 59.929 47.826 27.08 0.00 43.46 3.69
2318 2419 3.070159 GCACTAGTGATGGCAATAGAGGA 59.930 47.826 27.08 0.00 43.46 3.71
2319 2420 4.443457 GCACTAGTGATGGCAATAGAGGAA 60.443 45.833 27.08 0.00 43.46 3.36
2320 2421 5.674525 CACTAGTGATGGCAATAGAGGAAA 58.325 41.667 18.45 0.00 43.46 3.13
2321 2422 6.115446 CACTAGTGATGGCAATAGAGGAAAA 58.885 40.000 18.45 0.00 43.46 2.29
2322 2423 6.599244 CACTAGTGATGGCAATAGAGGAAAAA 59.401 38.462 18.45 0.00 43.46 1.94
2323 2424 7.284034 CACTAGTGATGGCAATAGAGGAAAAAT 59.716 37.037 18.45 0.00 43.46 1.82
2324 2425 6.705863 AGTGATGGCAATAGAGGAAAAATC 57.294 37.500 0.00 0.00 0.00 2.17
2325 2426 6.430007 AGTGATGGCAATAGAGGAAAAATCT 58.570 36.000 0.00 0.00 0.00 2.40
2326 2427 6.894103 AGTGATGGCAATAGAGGAAAAATCTT 59.106 34.615 0.00 0.00 0.00 2.40
2327 2428 8.055181 AGTGATGGCAATAGAGGAAAAATCTTA 58.945 33.333 0.00 0.00 0.00 2.10
2328 2429 8.854117 GTGATGGCAATAGAGGAAAAATCTTAT 58.146 33.333 0.00 0.00 0.00 1.73
2329 2430 8.853126 TGATGGCAATAGAGGAAAAATCTTATG 58.147 33.333 0.00 0.00 0.00 1.90
2330 2431 9.071276 GATGGCAATAGAGGAAAAATCTTATGA 57.929 33.333 0.00 0.00 0.00 2.15
2331 2432 8.821686 TGGCAATAGAGGAAAAATCTTATGAA 57.178 30.769 0.00 0.00 0.00 2.57
2332 2433 9.253832 TGGCAATAGAGGAAAAATCTTATGAAA 57.746 29.630 0.00 0.00 0.00 2.69
2333 2434 9.741647 GGCAATAGAGGAAAAATCTTATGAAAG 57.258 33.333 0.00 0.00 0.00 2.62
2334 2435 9.242477 GCAATAGAGGAAAAATCTTATGAAAGC 57.758 33.333 0.00 0.00 32.36 3.51
2337 2438 7.765695 AGAGGAAAAATCTTATGAAAGCACA 57.234 32.000 0.00 0.00 32.36 4.57
2338 2439 8.358582 AGAGGAAAAATCTTATGAAAGCACAT 57.641 30.769 0.00 0.00 32.36 3.21
2339 2440 8.248945 AGAGGAAAAATCTTATGAAAGCACATG 58.751 33.333 0.00 0.00 32.36 3.21
2340 2441 7.899973 AGGAAAAATCTTATGAAAGCACATGT 58.100 30.769 0.00 0.00 32.36 3.21
2341 2442 8.370182 AGGAAAAATCTTATGAAAGCACATGTT 58.630 29.630 0.00 0.00 32.36 2.71
2342 2443 8.650714 GGAAAAATCTTATGAAAGCACATGTTC 58.349 33.333 0.00 0.00 32.36 3.18
2343 2444 8.538409 AAAAATCTTATGAAAGCACATGTTCC 57.462 30.769 0.00 0.00 32.36 3.62
2344 2445 7.472334 AAATCTTATGAAAGCACATGTTCCT 57.528 32.000 0.00 0.00 32.36 3.36
2345 2446 7.472334 AATCTTATGAAAGCACATGTTCCTT 57.528 32.000 0.00 0.00 32.36 3.36
2346 2447 8.579850 AATCTTATGAAAGCACATGTTCCTTA 57.420 30.769 0.00 0.00 32.36 2.69
2347 2448 8.757982 ATCTTATGAAAGCACATGTTCCTTAT 57.242 30.769 0.00 0.00 32.36 1.73
2381 2482 4.888038 AGGTGGTCGAAAGTTTGTAAAC 57.112 40.909 0.00 0.00 39.17 2.01
2404 2505 5.834742 ACCCGGTATTAGTTTTTGGAAGTTT 59.165 36.000 0.00 0.00 0.00 2.66
2421 2522 0.902516 TTTTCGGGGCAATGGAAGGG 60.903 55.000 0.00 0.00 0.00 3.95
2433 2534 0.328258 TGGAAGGGCTGGTAGAAAGC 59.672 55.000 0.00 0.00 40.06 3.51
2435 2536 1.407575 GGAAGGGCTGGTAGAAAGCTC 60.408 57.143 0.00 0.00 41.76 4.09
2436 2537 1.279271 GAAGGGCTGGTAGAAAGCTCA 59.721 52.381 0.00 0.00 44.03 4.26
2442 2543 1.003580 CTGGTAGAAAGCTCAGGCCAA 59.996 52.381 5.01 0.00 39.73 4.52
2449 2550 2.677875 GCTCAGGCCAACCCCAAG 60.678 66.667 5.01 0.00 36.11 3.61
2460 2561 1.465387 ACCCCAAGTAGGCAAGGGT 60.465 57.895 0.00 0.00 46.40 4.34
2465 2566 3.203487 CCCCAAGTAGGCAAGGGTAAATA 59.797 47.826 0.00 0.00 39.76 1.40
2482 2583 6.196571 GGTAAATATTTTCATCAACCGACCG 58.803 40.000 5.91 0.00 0.00 4.79
2513 2614 2.353607 GTCGATAGCCCACGCGAG 60.354 66.667 15.93 4.16 41.18 5.03
2544 2645 2.812983 GCCCATCATGCTTGCTCTATGA 60.813 50.000 0.00 0.00 35.52 2.15
2550 2651 3.118519 TCATGCTTGCTCTATGAAGCTCA 60.119 43.478 0.00 0.00 44.15 4.26
2557 2658 0.103026 TCTATGAAGCTCATGCGCGT 59.897 50.000 8.43 0.00 45.42 6.01
2589 2690 0.817634 TTGGCTCGACAACACCCTTG 60.818 55.000 0.00 0.00 0.00 3.61
2595 2696 3.617263 GCTCGACAACACCCTTGTAATAG 59.383 47.826 0.00 0.00 33.55 1.73
2596 2697 4.619863 GCTCGACAACACCCTTGTAATAGA 60.620 45.833 0.00 0.00 33.55 1.98
2597 2698 4.813027 TCGACAACACCCTTGTAATAGAC 58.187 43.478 0.00 0.00 33.55 2.59
2598 2699 4.525487 TCGACAACACCCTTGTAATAGACT 59.475 41.667 0.00 0.00 33.55 3.24
2599 2700 5.711506 TCGACAACACCCTTGTAATAGACTA 59.288 40.000 0.00 0.00 33.55 2.59
2600 2701 6.209192 TCGACAACACCCTTGTAATAGACTAA 59.791 38.462 0.00 0.00 33.55 2.24
2601 2702 6.530534 CGACAACACCCTTGTAATAGACTAAG 59.469 42.308 0.00 0.00 33.55 2.18
2602 2703 7.312415 ACAACACCCTTGTAATAGACTAAGT 57.688 36.000 0.00 0.00 33.55 2.24
2603 2704 8.426569 ACAACACCCTTGTAATAGACTAAGTA 57.573 34.615 0.00 0.00 33.55 2.24
2604 2705 9.043548 ACAACACCCTTGTAATAGACTAAGTAT 57.956 33.333 0.00 0.00 33.55 2.12
2632 2733 1.750399 CATGGTAGCACACAGGGGC 60.750 63.158 0.00 0.00 0.00 5.80
2638 2739 1.913951 TAGCACACAGGGGCAGATGG 61.914 60.000 0.00 0.00 0.00 3.51
2640 2741 1.379916 CACACAGGGGCAGATGGAA 59.620 57.895 0.00 0.00 0.00 3.53
2789 2893 3.326297 CCCAAGGATGAGATTCTAGGTCC 59.674 52.174 0.00 4.19 0.00 4.46
2795 2899 0.030908 GAGATTCTAGGTCCGCCACG 59.969 60.000 0.00 0.00 37.19 4.94
2810 2914 4.626081 ACGTGCACCCACAGCCTC 62.626 66.667 12.15 0.00 42.17 4.70
2815 2919 0.476338 TGCACCCACAGCCTCTTAAA 59.524 50.000 0.00 0.00 0.00 1.52
2828 2932 2.092699 CCTCTTAAAAGGCCCTCTCCTG 60.093 54.545 0.00 0.00 36.38 3.86
2838 2942 2.437359 CTCTCCTGCGGCAAAGGG 60.437 66.667 3.44 1.79 35.35 3.95
2842 2946 3.142838 CCTGCGGCAAAGGGATGG 61.143 66.667 3.44 0.00 0.00 3.51
2864 2968 1.272704 GCTTCTCCACCTTTCCCCATT 60.273 52.381 0.00 0.00 0.00 3.16
2869 2973 0.618393 CCACCTTTCCCCATTGCCAT 60.618 55.000 0.00 0.00 0.00 4.40
2882 2986 4.360643 GCCATGGCAGGGATTGAA 57.639 55.556 32.08 0.00 41.49 2.69
2883 2987 2.121645 GCCATGGCAGGGATTGAAG 58.878 57.895 32.08 0.00 41.49 3.02
2884 2988 1.397390 GCCATGGCAGGGATTGAAGG 61.397 60.000 32.08 0.00 41.49 3.46
2885 2989 0.259647 CCATGGCAGGGATTGAAGGA 59.740 55.000 14.11 0.00 0.00 3.36
2886 2990 1.342275 CCATGGCAGGGATTGAAGGAA 60.342 52.381 14.11 0.00 0.00 3.36
2887 2991 2.459644 CATGGCAGGGATTGAAGGAAA 58.540 47.619 0.00 0.00 0.00 3.13
2888 2992 2.925966 TGGCAGGGATTGAAGGAAAT 57.074 45.000 0.00 0.00 0.00 2.17
2889 2993 4.217510 CATGGCAGGGATTGAAGGAAATA 58.782 43.478 0.00 0.00 0.00 1.40
2890 2994 4.541250 TGGCAGGGATTGAAGGAAATAT 57.459 40.909 0.00 0.00 0.00 1.28
2891 2995 4.217510 TGGCAGGGATTGAAGGAAATATG 58.782 43.478 0.00 0.00 0.00 1.78
2892 2996 3.006217 GGCAGGGATTGAAGGAAATATGC 59.994 47.826 0.00 0.00 0.00 3.14
2893 2997 3.006217 GCAGGGATTGAAGGAAATATGCC 59.994 47.826 0.00 0.00 0.00 4.40
2894 2998 3.575687 CAGGGATTGAAGGAAATATGCCC 59.424 47.826 0.00 0.00 0.00 5.36
2895 2999 3.468625 AGGGATTGAAGGAAATATGCCCT 59.531 43.478 0.00 0.00 38.52 5.19
2896 3000 4.669768 AGGGATTGAAGGAAATATGCCCTA 59.330 41.667 0.00 0.00 41.39 3.53
2897 3001 5.012893 GGGATTGAAGGAAATATGCCCTAG 58.987 45.833 0.00 0.00 31.36 3.02
2898 3002 5.222130 GGGATTGAAGGAAATATGCCCTAGA 60.222 44.000 0.00 0.00 31.36 2.43
2899 3003 5.942826 GGATTGAAGGAAATATGCCCTAGAG 59.057 44.000 0.00 0.00 31.36 2.43
2900 3004 4.982241 TGAAGGAAATATGCCCTAGAGG 57.018 45.455 0.00 0.00 39.47 3.69
2916 3020 7.881775 CCCTAGAGGCAATAATAAAGTTGTT 57.118 36.000 0.00 0.00 0.00 2.83
2917 3021 8.974060 CCCTAGAGGCAATAATAAAGTTGTTA 57.026 34.615 0.00 0.00 0.00 2.41
2918 3022 9.574516 CCCTAGAGGCAATAATAAAGTTGTTAT 57.425 33.333 0.00 0.00 0.00 1.89
2978 3082 9.851686 ATTCATGCTAGAATTGTATTAACTGGA 57.148 29.630 0.00 0.00 34.70 3.86
2979 3083 9.679661 TTCATGCTAGAATTGTATTAACTGGAA 57.320 29.630 0.00 0.00 0.00 3.53
2980 3084 9.679661 TCATGCTAGAATTGTATTAACTGGAAA 57.320 29.630 0.00 0.00 0.00 3.13
2981 3085 9.722056 CATGCTAGAATTGTATTAACTGGAAAC 57.278 33.333 0.00 0.00 0.00 2.78
2982 3086 9.686683 ATGCTAGAATTGTATTAACTGGAAACT 57.313 29.630 0.00 0.00 0.00 2.66
2983 3087 9.515226 TGCTAGAATTGTATTAACTGGAAACTT 57.485 29.630 0.00 0.00 0.00 2.66
2995 3099 6.861065 AACTGGAAACTTAGTACATGTGTG 57.139 37.500 9.11 0.00 0.00 3.82
2996 3100 6.169557 ACTGGAAACTTAGTACATGTGTGA 57.830 37.500 9.11 0.00 0.00 3.58
2997 3101 6.588204 ACTGGAAACTTAGTACATGTGTGAA 58.412 36.000 9.11 0.00 0.00 3.18
2998 3102 7.224297 ACTGGAAACTTAGTACATGTGTGAAT 58.776 34.615 9.11 0.00 0.00 2.57
2999 3103 8.372459 ACTGGAAACTTAGTACATGTGTGAATA 58.628 33.333 9.11 0.00 0.00 1.75
3000 3104 9.383519 CTGGAAACTTAGTACATGTGTGAATAT 57.616 33.333 9.11 0.00 0.00 1.28
3027 3131 7.715265 AGACAAACAAAGTGTCACTAGTATG 57.285 36.000 5.77 6.23 46.44 2.39
3028 3132 6.202954 AGACAAACAAAGTGTCACTAGTATGC 59.797 38.462 5.77 0.58 46.44 3.14
3029 3133 5.238650 ACAAACAAAGTGTCACTAGTATGCC 59.761 40.000 5.77 0.00 0.00 4.40
3030 3134 4.891992 ACAAAGTGTCACTAGTATGCCT 57.108 40.909 5.77 0.00 0.00 4.75
3031 3135 4.822026 ACAAAGTGTCACTAGTATGCCTC 58.178 43.478 5.77 0.00 0.00 4.70
3032 3136 4.528596 ACAAAGTGTCACTAGTATGCCTCT 59.471 41.667 5.77 0.00 0.00 3.69
3033 3137 5.715279 ACAAAGTGTCACTAGTATGCCTCTA 59.285 40.000 5.77 0.00 0.00 2.43
3034 3138 5.838531 AAGTGTCACTAGTATGCCTCTAC 57.161 43.478 5.77 0.00 0.00 2.59
3035 3139 5.118729 AGTGTCACTAGTATGCCTCTACT 57.881 43.478 2.87 0.00 36.04 2.57
3036 3140 5.511363 AGTGTCACTAGTATGCCTCTACTT 58.489 41.667 2.87 0.00 33.96 2.24
3037 3141 5.358442 AGTGTCACTAGTATGCCTCTACTTG 59.642 44.000 2.87 0.00 33.96 3.16
3038 3142 5.357314 GTGTCACTAGTATGCCTCTACTTGA 59.643 44.000 0.00 0.18 33.96 3.02
3039 3143 5.357314 TGTCACTAGTATGCCTCTACTTGAC 59.643 44.000 0.00 11.98 38.64 3.18
3040 3144 5.591067 GTCACTAGTATGCCTCTACTTGACT 59.409 44.000 0.00 0.00 36.95 3.41
3041 3145 6.766944 GTCACTAGTATGCCTCTACTTGACTA 59.233 42.308 0.00 0.00 36.95 2.59
3042 3146 6.993308 TCACTAGTATGCCTCTACTTGACTAG 59.007 42.308 0.00 0.00 40.35 2.57
3043 3147 5.766174 ACTAGTATGCCTCTACTTGACTAGC 59.234 44.000 0.00 0.00 38.86 3.42
3044 3148 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
3045 3149 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
3046 3150 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
3047 3151 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
3048 3152 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
3049 3153 3.732471 GCCTCTACTTGACTAGCTCGTTG 60.732 52.174 0.00 0.00 0.00 4.10
3050 3154 3.690139 CCTCTACTTGACTAGCTCGTTGA 59.310 47.826 0.00 0.00 0.00 3.18
3051 3155 4.156190 CCTCTACTTGACTAGCTCGTTGAA 59.844 45.833 0.00 0.00 0.00 2.69
3052 3156 5.163602 CCTCTACTTGACTAGCTCGTTGAAT 60.164 44.000 0.00 0.00 0.00 2.57
3053 3157 5.881447 TCTACTTGACTAGCTCGTTGAATC 58.119 41.667 0.00 0.00 0.00 2.52
3054 3158 4.521130 ACTTGACTAGCTCGTTGAATCA 57.479 40.909 0.00 0.00 0.00 2.57
3055 3159 4.883083 ACTTGACTAGCTCGTTGAATCAA 58.117 39.130 0.00 0.00 0.00 2.57
3056 3160 5.297547 ACTTGACTAGCTCGTTGAATCAAA 58.702 37.500 0.00 0.00 0.00 2.69
3057 3161 5.406780 ACTTGACTAGCTCGTTGAATCAAAG 59.593 40.000 0.00 0.00 0.00 2.77
3058 3162 5.134202 TGACTAGCTCGTTGAATCAAAGA 57.866 39.130 10.87 10.87 31.82 2.52
3059 3163 5.724328 TGACTAGCTCGTTGAATCAAAGAT 58.276 37.500 11.68 1.68 32.24 2.40
3060 3164 5.578336 TGACTAGCTCGTTGAATCAAAGATG 59.422 40.000 11.68 7.72 32.24 2.90
3061 3165 4.872691 ACTAGCTCGTTGAATCAAAGATGG 59.127 41.667 11.68 3.76 32.24 3.51
3062 3166 3.679389 AGCTCGTTGAATCAAAGATGGT 58.321 40.909 11.68 8.95 32.24 3.55
3063 3167 4.074970 AGCTCGTTGAATCAAAGATGGTT 58.925 39.130 11.68 0.00 32.24 3.67
3064 3168 5.245531 AGCTCGTTGAATCAAAGATGGTTA 58.754 37.500 11.68 0.00 32.24 2.85
3065 3169 5.705441 AGCTCGTTGAATCAAAGATGGTTAA 59.295 36.000 11.68 0.00 32.24 2.01
3066 3170 6.024049 GCTCGTTGAATCAAAGATGGTTAAG 58.976 40.000 11.68 0.83 32.24 1.85
3067 3171 6.348540 GCTCGTTGAATCAAAGATGGTTAAGT 60.349 38.462 11.68 0.00 32.24 2.24
3068 3172 7.504924 TCGTTGAATCAAAGATGGTTAAGTT 57.495 32.000 7.50 0.00 27.31 2.66
3069 3173 7.936584 TCGTTGAATCAAAGATGGTTAAGTTT 58.063 30.769 7.50 0.00 27.31 2.66
3070 3174 8.073768 TCGTTGAATCAAAGATGGTTAAGTTTC 58.926 33.333 7.50 0.00 27.31 2.78
3071 3175 7.326063 CGTTGAATCAAAGATGGTTAAGTTTCC 59.674 37.037 2.77 0.00 27.31 3.13
3072 3176 8.360390 GTTGAATCAAAGATGGTTAAGTTTCCT 58.640 33.333 0.00 0.00 27.31 3.36
3073 3177 9.581289 TTGAATCAAAGATGGTTAAGTTTCCTA 57.419 29.630 0.00 0.00 27.31 2.94
3074 3178 9.581289 TGAATCAAAGATGGTTAAGTTTCCTAA 57.419 29.630 0.00 0.00 27.31 2.69
3075 3179 9.841880 GAATCAAAGATGGTTAAGTTTCCTAAC 57.158 33.333 0.00 0.00 27.31 2.34
3076 3180 7.754851 TCAAAGATGGTTAAGTTTCCTAACC 57.245 36.000 5.05 5.05 42.55 2.85
3083 3187 7.319052 TGGTTAAGTTTCCTAACCATAGACA 57.681 36.000 9.79 0.00 45.67 3.41
3084 3188 7.924541 TGGTTAAGTTTCCTAACCATAGACAT 58.075 34.615 9.79 0.00 45.67 3.06
3085 3189 7.827236 TGGTTAAGTTTCCTAACCATAGACATG 59.173 37.037 9.79 0.00 45.67 3.21
3086 3190 8.044908 GGTTAAGTTTCCTAACCATAGACATGA 58.955 37.037 0.00 0.00 41.99 3.07
3087 3191 9.099454 GTTAAGTTTCCTAACCATAGACATGAG 57.901 37.037 0.00 0.00 34.71 2.90
3088 3192 6.875972 AGTTTCCTAACCATAGACATGAGT 57.124 37.500 0.00 0.00 34.71 3.41
3089 3193 7.259088 AGTTTCCTAACCATAGACATGAGTT 57.741 36.000 0.00 0.00 34.71 3.01
3090 3194 7.106239 AGTTTCCTAACCATAGACATGAGTTG 58.894 38.462 0.00 0.00 34.71 3.16
3091 3195 6.620877 TTCCTAACCATAGACATGAGTTGT 57.379 37.500 0.00 0.00 42.79 3.32
3106 3210 7.549839 ACATGAGTTGTCATTTGATTAATGGG 58.450 34.615 0.00 0.00 40.84 4.00
3107 3211 7.396907 ACATGAGTTGTCATTTGATTAATGGGA 59.603 33.333 0.00 0.00 40.84 4.37
3108 3212 7.959658 TGAGTTGTCATTTGATTAATGGGAT 57.040 32.000 0.00 0.00 43.19 3.85
3109 3213 7.999679 TGAGTTGTCATTTGATTAATGGGATC 58.000 34.615 0.00 0.00 43.19 3.36
3110 3214 7.614974 TGAGTTGTCATTTGATTAATGGGATCA 59.385 33.333 0.00 0.00 43.19 2.92
3111 3215 7.775120 AGTTGTCATTTGATTAATGGGATCAC 58.225 34.615 0.00 0.00 43.19 3.06
3112 3216 7.396907 AGTTGTCATTTGATTAATGGGATCACA 59.603 33.333 0.00 0.00 43.19 3.58
3113 3217 7.901283 TGTCATTTGATTAATGGGATCACAT 57.099 32.000 4.06 4.06 43.19 3.21
3114 3218 7.944061 TGTCATTTGATTAATGGGATCACATC 58.056 34.615 11.76 0.00 43.19 3.06
3115 3219 7.560626 TGTCATTTGATTAATGGGATCACATCA 59.439 33.333 11.76 2.49 43.19 3.07
3116 3220 8.582437 GTCATTTGATTAATGGGATCACATCAT 58.418 33.333 11.76 6.60 43.19 2.45
3117 3221 9.150028 TCATTTGATTAATGGGATCACATCATT 57.850 29.630 11.76 9.08 43.19 2.57
3120 3224 9.865152 TTTGATTAATGGGATCACATCATTAGA 57.135 29.630 11.76 0.00 35.59 2.10
3121 3225 9.511272 TTGATTAATGGGATCACATCATTAGAG 57.489 33.333 11.76 0.00 35.59 2.43
3122 3226 8.883302 TGATTAATGGGATCACATCATTAGAGA 58.117 33.333 11.76 0.00 35.59 3.10
3123 3227 9.730705 GATTAATGGGATCACATCATTAGAGAA 57.269 33.333 11.76 0.00 35.59 2.87
3125 3229 7.997773 AATGGGATCACATCATTAGAGAATG 57.002 36.000 11.76 0.00 43.39 2.67
3139 3243 9.106070 TCATTAGAGAATGATGTGATTGACTTG 57.894 33.333 0.00 0.00 45.26 3.16
3140 3244 9.106070 CATTAGAGAATGATGTGATTGACTTGA 57.894 33.333 0.00 0.00 44.59 3.02
3141 3245 6.981762 AGAGAATGATGTGATTGACTTGAC 57.018 37.500 0.00 0.00 0.00 3.18
3142 3246 5.879223 AGAGAATGATGTGATTGACTTGACC 59.121 40.000 0.00 0.00 0.00 4.02
3143 3247 4.946157 AGAATGATGTGATTGACTTGACCC 59.054 41.667 0.00 0.00 0.00 4.46
3144 3248 3.786368 TGATGTGATTGACTTGACCCA 57.214 42.857 0.00 0.00 0.00 4.51
3145 3249 4.305539 TGATGTGATTGACTTGACCCAT 57.694 40.909 0.00 0.00 0.00 4.00
3146 3250 4.264253 TGATGTGATTGACTTGACCCATC 58.736 43.478 0.00 0.00 0.00 3.51
3147 3251 3.071874 TGTGATTGACTTGACCCATCC 57.928 47.619 0.00 0.00 0.00 3.51
3148 3252 2.374839 TGTGATTGACTTGACCCATCCA 59.625 45.455 0.00 0.00 0.00 3.41
3149 3253 3.010472 TGTGATTGACTTGACCCATCCAT 59.990 43.478 0.00 0.00 0.00 3.41
3150 3254 4.019174 GTGATTGACTTGACCCATCCATT 58.981 43.478 0.00 0.00 0.00 3.16
3151 3255 5.192927 GTGATTGACTTGACCCATCCATTA 58.807 41.667 0.00 0.00 0.00 1.90
3152 3256 5.297776 GTGATTGACTTGACCCATCCATTAG 59.702 44.000 0.00 0.00 0.00 1.73
3153 3257 3.281727 TGACTTGACCCATCCATTAGC 57.718 47.619 0.00 0.00 0.00 3.09
3154 3258 2.846206 TGACTTGACCCATCCATTAGCT 59.154 45.455 0.00 0.00 0.00 3.32
3155 3259 3.266772 TGACTTGACCCATCCATTAGCTT 59.733 43.478 0.00 0.00 0.00 3.74
3156 3260 4.473196 TGACTTGACCCATCCATTAGCTTA 59.527 41.667 0.00 0.00 0.00 3.09
3157 3261 5.041191 ACTTGACCCATCCATTAGCTTAG 57.959 43.478 0.00 0.00 0.00 2.18
3158 3262 3.492102 TGACCCATCCATTAGCTTAGC 57.508 47.619 0.00 0.00 0.00 3.09
3159 3263 2.777114 TGACCCATCCATTAGCTTAGCA 59.223 45.455 7.07 0.00 0.00 3.49
3160 3264 3.142174 GACCCATCCATTAGCTTAGCAC 58.858 50.000 7.07 0.00 0.00 4.40
3161 3265 2.146342 CCCATCCATTAGCTTAGCACG 58.854 52.381 7.07 0.00 0.00 5.34
3162 3266 2.224281 CCCATCCATTAGCTTAGCACGA 60.224 50.000 7.07 0.00 0.00 4.35
3163 3267 3.557898 CCCATCCATTAGCTTAGCACGAT 60.558 47.826 7.07 0.00 0.00 3.73
3164 3268 3.434641 CCATCCATTAGCTTAGCACGATG 59.565 47.826 7.07 9.05 0.00 3.84
3165 3269 4.309933 CATCCATTAGCTTAGCACGATGA 58.690 43.478 7.07 0.00 0.00 2.92
3166 3270 4.607293 TCCATTAGCTTAGCACGATGAT 57.393 40.909 7.07 0.00 0.00 2.45
3167 3271 4.560128 TCCATTAGCTTAGCACGATGATC 58.440 43.478 7.07 0.00 0.00 2.92
3168 3272 3.366121 CCATTAGCTTAGCACGATGATCG 59.634 47.826 14.01 14.01 46.93 3.69
3182 3286 4.957971 CGATGATCGTTTAGTTTGTTGCT 58.042 39.130 6.68 0.00 34.72 3.91
3183 3287 6.089920 CGATGATCGTTTAGTTTGTTGCTA 57.910 37.500 6.68 0.00 34.72 3.49
3184 3288 6.705782 CGATGATCGTTTAGTTTGTTGCTAT 58.294 36.000 6.68 0.00 34.72 2.97
3185 3289 7.180079 CGATGATCGTTTAGTTTGTTGCTATT 58.820 34.615 6.68 0.00 34.72 1.73
3186 3290 7.162546 CGATGATCGTTTAGTTTGTTGCTATTG 59.837 37.037 6.68 0.00 34.72 1.90
3187 3291 6.083630 TGATCGTTTAGTTTGTTGCTATTGC 58.916 36.000 0.00 0.00 40.20 3.56
3188 3292 5.682943 TCGTTTAGTTTGTTGCTATTGCT 57.317 34.783 0.00 0.00 40.48 3.91
3189 3293 6.067263 TCGTTTAGTTTGTTGCTATTGCTT 57.933 33.333 0.00 0.00 40.48 3.91
3190 3294 6.500041 TCGTTTAGTTTGTTGCTATTGCTTT 58.500 32.000 0.00 0.00 40.48 3.51
3191 3295 6.635239 TCGTTTAGTTTGTTGCTATTGCTTTC 59.365 34.615 0.00 0.00 40.48 2.62
3192 3296 6.636850 CGTTTAGTTTGTTGCTATTGCTTTCT 59.363 34.615 0.00 0.00 40.48 2.52
3193 3297 7.149128 CGTTTAGTTTGTTGCTATTGCTTTCTC 60.149 37.037 0.00 0.00 40.48 2.87
3194 3298 5.126396 AGTTTGTTGCTATTGCTTTCTCC 57.874 39.130 0.00 0.00 40.48 3.71
3195 3299 4.584325 AGTTTGTTGCTATTGCTTTCTCCA 59.416 37.500 0.00 0.00 40.48 3.86
3196 3300 5.244626 AGTTTGTTGCTATTGCTTTCTCCAT 59.755 36.000 0.00 0.00 40.48 3.41
3197 3301 6.434028 AGTTTGTTGCTATTGCTTTCTCCATA 59.566 34.615 0.00 0.00 40.48 2.74
3198 3302 6.832520 TTGTTGCTATTGCTTTCTCCATAA 57.167 33.333 0.00 0.00 40.48 1.90
3199 3303 6.194796 TGTTGCTATTGCTTTCTCCATAAC 57.805 37.500 0.00 0.00 40.48 1.89
3200 3304 5.945784 TGTTGCTATTGCTTTCTCCATAACT 59.054 36.000 0.00 0.00 40.48 2.24
3201 3305 7.109501 TGTTGCTATTGCTTTCTCCATAACTA 58.890 34.615 0.00 0.00 40.48 2.24
3202 3306 7.775093 TGTTGCTATTGCTTTCTCCATAACTAT 59.225 33.333 0.00 0.00 40.48 2.12
3203 3307 9.273016 GTTGCTATTGCTTTCTCCATAACTATA 57.727 33.333 0.00 0.00 40.48 1.31
3204 3308 8.833231 TGCTATTGCTTTCTCCATAACTATAC 57.167 34.615 0.00 0.00 40.48 1.47
3205 3309 8.428852 TGCTATTGCTTTCTCCATAACTATACA 58.571 33.333 0.00 0.00 40.48 2.29
3206 3310 9.442047 GCTATTGCTTTCTCCATAACTATACAT 57.558 33.333 0.00 0.00 36.03 2.29
3209 3313 9.632638 ATTGCTTTCTCCATAACTATACATGTT 57.367 29.630 2.30 0.00 0.00 2.71
3210 3314 8.662781 TGCTTTCTCCATAACTATACATGTTC 57.337 34.615 2.30 0.00 0.00 3.18
3211 3315 7.715249 TGCTTTCTCCATAACTATACATGTTCC 59.285 37.037 2.30 0.00 0.00 3.62
3212 3316 7.934120 GCTTTCTCCATAACTATACATGTTCCT 59.066 37.037 2.30 0.00 0.00 3.36
3216 3320 9.822727 TCTCCATAACTATACATGTTCCTATGA 57.177 33.333 2.30 0.00 0.00 2.15
3217 3321 9.862371 CTCCATAACTATACATGTTCCTATGAC 57.138 37.037 2.30 0.00 0.00 3.06
3218 3322 9.601810 TCCATAACTATACATGTTCCTATGACT 57.398 33.333 2.30 0.00 0.00 3.41
3224 3328 8.744652 ACTATACATGTTCCTATGACTATGAGC 58.255 37.037 2.30 0.00 0.00 4.26
3225 3329 7.789202 ATACATGTTCCTATGACTATGAGCT 57.211 36.000 2.30 0.00 0.00 4.09
3226 3330 6.095432 ACATGTTCCTATGACTATGAGCTC 57.905 41.667 6.82 6.82 0.00 4.09
3227 3331 5.600069 ACATGTTCCTATGACTATGAGCTCA 59.400 40.000 20.79 20.79 0.00 4.26
3228 3332 6.269538 ACATGTTCCTATGACTATGAGCTCAT 59.730 38.462 30.85 30.85 40.22 2.90
3229 3333 6.094193 TGTTCCTATGACTATGAGCTCATG 57.906 41.667 34.48 25.67 37.15 3.07
3230 3334 4.797800 TCCTATGACTATGAGCTCATGC 57.202 45.455 34.48 23.81 37.15 4.06
3231 3335 4.154942 TCCTATGACTATGAGCTCATGCA 58.845 43.478 34.48 27.70 42.74 3.96
3232 3336 4.590222 TCCTATGACTATGAGCTCATGCAA 59.410 41.667 34.48 19.38 42.74 4.08
3233 3337 4.689812 CCTATGACTATGAGCTCATGCAAC 59.310 45.833 34.48 22.71 42.74 4.17
3234 3338 3.900966 TGACTATGAGCTCATGCAACT 57.099 42.857 34.48 14.46 42.74 3.16
3235 3339 3.790091 TGACTATGAGCTCATGCAACTC 58.210 45.455 34.48 21.10 42.74 3.01
3236 3340 3.129871 GACTATGAGCTCATGCAACTCC 58.870 50.000 34.48 14.92 42.74 3.85
3237 3341 2.158842 ACTATGAGCTCATGCAACTCCC 60.159 50.000 34.48 0.00 42.74 4.30
3238 3342 0.463295 ATGAGCTCATGCAACTCCCG 60.463 55.000 28.21 0.00 42.74 5.14
3239 3343 1.219124 GAGCTCATGCAACTCCCGA 59.781 57.895 9.40 0.00 42.74 5.14
3240 3344 0.391661 GAGCTCATGCAACTCCCGAA 60.392 55.000 9.40 0.00 42.74 4.30
3241 3345 0.254178 AGCTCATGCAACTCCCGAAT 59.746 50.000 0.00 0.00 42.74 3.34
3242 3346 1.486310 AGCTCATGCAACTCCCGAATA 59.514 47.619 0.00 0.00 42.74 1.75
3243 3347 1.599542 GCTCATGCAACTCCCGAATAC 59.400 52.381 0.00 0.00 39.41 1.89
3244 3348 2.213499 CTCATGCAACTCCCGAATACC 58.787 52.381 0.00 0.00 0.00 2.73
3245 3349 1.557371 TCATGCAACTCCCGAATACCA 59.443 47.619 0.00 0.00 0.00 3.25
3246 3350 1.942657 CATGCAACTCCCGAATACCAG 59.057 52.381 0.00 0.00 0.00 4.00
3247 3351 1.271856 TGCAACTCCCGAATACCAGA 58.728 50.000 0.00 0.00 0.00 3.86
3248 3352 1.207089 TGCAACTCCCGAATACCAGAG 59.793 52.381 0.00 0.00 0.00 3.35
3249 3353 1.473434 GCAACTCCCGAATACCAGAGG 60.473 57.143 0.00 0.00 0.00 3.69
3250 3354 2.108168 CAACTCCCGAATACCAGAGGA 58.892 52.381 0.00 0.00 0.00 3.71
3251 3355 2.500098 CAACTCCCGAATACCAGAGGAA 59.500 50.000 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 143 1.109920 TATCGCACTGCCCCTCTCTC 61.110 60.000 0.00 0.00 0.00 3.20
146 147 1.109920 TCTCTATCGCACTGCCCCTC 61.110 60.000 0.00 0.00 0.00 4.30
147 148 1.075970 TCTCTATCGCACTGCCCCT 60.076 57.895 0.00 0.00 0.00 4.79
148 149 1.109920 TCTCTCTATCGCACTGCCCC 61.110 60.000 0.00 0.00 0.00 5.80
192 194 3.611025 CCATAAGGGCCCTTATCCAAA 57.389 47.619 42.39 26.27 44.61 3.28
267 269 3.016474 GAGCAAAGTGAGCCGACGC 62.016 63.158 0.00 0.00 0.00 5.19
271 273 3.793144 GGCGAGCAAAGTGAGCCG 61.793 66.667 0.00 0.00 38.28 5.52
336 339 4.535526 AAGCAAAGTCTGGTGTGTTTTT 57.464 36.364 0.00 0.00 35.42 1.94
337 340 4.244862 CAAAGCAAAGTCTGGTGTGTTTT 58.755 39.130 0.00 0.00 36.22 2.43
338 341 3.848726 CAAAGCAAAGTCTGGTGTGTTT 58.151 40.909 0.00 0.00 36.22 2.83
339 342 3.508744 CAAAGCAAAGTCTGGTGTGTT 57.491 42.857 0.00 0.00 36.22 3.32
340 343 2.446435 ACAAAGCAAAGTCTGGTGTGT 58.554 42.857 0.00 0.00 46.96 3.72
341 344 3.119531 TGAACAAAGCAAAGTCTGGTGTG 60.120 43.478 0.00 0.00 44.96 3.82
342 345 3.088532 TGAACAAAGCAAAGTCTGGTGT 58.911 40.909 0.00 0.00 35.42 4.16
343 346 3.438360 GTGAACAAAGCAAAGTCTGGTG 58.562 45.455 0.00 0.00 35.42 4.17
344 347 2.427095 GGTGAACAAAGCAAAGTCTGGT 59.573 45.455 0.00 0.00 37.35 4.00
345 348 2.426738 TGGTGAACAAAGCAAAGTCTGG 59.573 45.455 0.00 0.00 0.00 3.86
346 349 3.781079 TGGTGAACAAAGCAAAGTCTG 57.219 42.857 0.00 0.00 0.00 3.51
347 350 3.701040 ACATGGTGAACAAAGCAAAGTCT 59.299 39.130 0.00 0.00 0.00 3.24
358 361 1.612950 GCAATGGACACATGGTGAACA 59.387 47.619 2.98 2.23 37.40 3.18
368 371 0.039035 TACCCAAGGGCAATGGACAC 59.961 55.000 4.70 0.00 40.56 3.67
445 448 3.100817 CGTCTTTTGTCTTGTGCTTGTG 58.899 45.455 0.00 0.00 0.00 3.33
473 476 1.739667 GTTGGGTTCCCACAGTTGC 59.260 57.895 10.41 0.00 35.60 4.17
496 500 4.096984 GTCATGGCGGAAAATTTCAGATCT 59.903 41.667 9.93 0.00 0.00 2.75
503 507 1.275010 GGTGGTCATGGCGGAAAATTT 59.725 47.619 0.00 0.00 0.00 1.82
515 519 1.005394 GACGGTCGTTGGTGGTCAT 60.005 57.895 0.00 0.00 0.00 3.06
516 520 2.418356 GACGGTCGTTGGTGGTCA 59.582 61.111 0.00 0.00 0.00 4.02
524 528 3.014085 ATGGCATCCGACGGTCGTT 62.014 57.895 26.72 12.82 38.40 3.85
531 535 4.147701 CCTTCCATGGCATCCGAC 57.852 61.111 6.96 0.00 0.00 4.79
549 553 1.517257 GGCAGTCGTGTCGAGGATG 60.517 63.158 0.00 0.00 36.23 3.51
571 575 1.457643 CGATGGGGAGGCTACAGGA 60.458 63.158 0.00 0.00 0.00 3.86
576 580 1.760875 GGTCACGATGGGGAGGCTA 60.761 63.158 0.00 0.00 0.00 3.93
617 621 2.049802 GACGACGGGAAAGCACGA 60.050 61.111 0.00 0.00 45.89 4.35
630 634 2.258591 GCTTCTCGGCACTGACGA 59.741 61.111 6.84 6.84 42.47 4.20
644 648 2.159179 AAGTGGACAACCTTTGGCTT 57.841 45.000 0.00 0.00 39.20 4.35
660 664 3.844211 TGGCAGTCCAAGTCCTATAAAGT 59.156 43.478 0.00 0.00 39.99 2.66
693 697 2.280524 CTTCGCCGGTGTCCACAA 60.281 61.111 16.01 0.00 0.00 3.33
694 698 4.980805 GCTTCGCCGGTGTCCACA 62.981 66.667 16.01 0.00 0.00 4.17
701 705 2.431942 CTACAACGCTTCGCCGGT 60.432 61.111 1.90 0.00 0.00 5.28
712 716 0.037734 CCTTGGTGGGGTCCTACAAC 59.962 60.000 5.88 1.64 0.00 3.32
725 729 3.868200 CTTGCGGGGAAGCCTTGGT 62.868 63.158 0.00 0.00 36.02 3.67
738 742 1.131420 GTCAGCTTCTTCGCTTGCG 59.869 57.895 8.87 8.87 38.41 4.85
755 759 3.148279 CGGCGGCCTCTTCCTAGT 61.148 66.667 18.34 0.00 0.00 2.57
769 773 3.654020 GCCAATGGATCTCGCGGC 61.654 66.667 6.13 0.00 0.00 6.53
796 800 4.962155 TCTTCTTCTTCTTCTTGTGGGTC 58.038 43.478 0.00 0.00 0.00 4.46
804 808 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
815 819 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
816 820 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
817 821 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
819 823 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
820 824 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
822 826 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
823 827 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
824 828 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
825 829 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
830 834 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
831 835 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
832 836 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
833 837 9.325198 GTTCTTCTTCTTCTTCTTCTTCTTCTT 57.675 33.333 0.00 0.00 0.00 2.52
834 838 7.931407 GGTTCTTCTTCTTCTTCTTCTTCTTCT 59.069 37.037 0.00 0.00 0.00 2.85
835 839 7.713073 TGGTTCTTCTTCTTCTTCTTCTTCTTC 59.287 37.037 0.00 0.00 0.00 2.87
836 840 7.569240 TGGTTCTTCTTCTTCTTCTTCTTCTT 58.431 34.615 0.00 0.00 0.00 2.52
837 841 7.130681 TGGTTCTTCTTCTTCTTCTTCTTCT 57.869 36.000 0.00 0.00 0.00 2.85
838 842 7.148656 CGATGGTTCTTCTTCTTCTTCTTCTTC 60.149 40.741 0.00 0.00 0.00 2.87
839 843 6.648725 CGATGGTTCTTCTTCTTCTTCTTCTT 59.351 38.462 0.00 0.00 0.00 2.52
840 844 6.162777 CGATGGTTCTTCTTCTTCTTCTTCT 58.837 40.000 0.00 0.00 0.00 2.85
841 845 5.350091 CCGATGGTTCTTCTTCTTCTTCTTC 59.650 44.000 0.00 0.00 0.00 2.87
842 846 5.241662 CCGATGGTTCTTCTTCTTCTTCTT 58.758 41.667 0.00 0.00 0.00 2.52
843 847 4.826556 CCGATGGTTCTTCTTCTTCTTCT 58.173 43.478 0.00 0.00 0.00 2.85
844 848 3.372514 GCCGATGGTTCTTCTTCTTCTTC 59.627 47.826 0.00 0.00 0.00 2.87
845 849 3.339141 GCCGATGGTTCTTCTTCTTCTT 58.661 45.455 0.00 0.00 0.00 2.52
846 850 2.675317 CGCCGATGGTTCTTCTTCTTCT 60.675 50.000 0.00 0.00 0.00 2.85
847 851 1.661112 CGCCGATGGTTCTTCTTCTTC 59.339 52.381 0.00 0.00 0.00 2.87
848 852 1.275291 TCGCCGATGGTTCTTCTTCTT 59.725 47.619 0.00 0.00 0.00 2.52
849 853 0.895530 TCGCCGATGGTTCTTCTTCT 59.104 50.000 0.00 0.00 0.00 2.85
850 854 1.861575 GATCGCCGATGGTTCTTCTTC 59.138 52.381 3.34 0.00 0.00 2.87
851 855 1.473434 GGATCGCCGATGGTTCTTCTT 60.473 52.381 3.34 0.00 0.00 2.52
852 856 0.105039 GGATCGCCGATGGTTCTTCT 59.895 55.000 3.34 0.00 0.00 2.85
853 857 0.880718 GGGATCGCCGATGGTTCTTC 60.881 60.000 3.34 0.00 33.83 2.87
854 858 1.146263 GGGATCGCCGATGGTTCTT 59.854 57.895 3.34 0.00 33.83 2.52
855 859 1.749334 GAGGGATCGCCGATGGTTCT 61.749 60.000 3.34 0.00 33.83 3.01
856 860 1.301009 GAGGGATCGCCGATGGTTC 60.301 63.158 3.34 0.00 33.83 3.62
857 861 2.808206 GGAGGGATCGCCGATGGTT 61.808 63.158 3.34 0.00 33.83 3.67
858 862 3.234730 GGAGGGATCGCCGATGGT 61.235 66.667 3.34 0.00 33.83 3.55
876 880 1.765597 GAGGAGTTGGGGTCGTGGTT 61.766 60.000 0.00 0.00 0.00 3.67
883 887 1.359168 GGTGTTAGAGGAGTTGGGGT 58.641 55.000 0.00 0.00 0.00 4.95
924 929 1.524621 CTTATGCGGCAGTGGGAGG 60.525 63.158 9.25 0.00 0.00 4.30
961 966 2.151202 GATGTTGGTGGTTGTGACGAT 58.849 47.619 0.00 0.00 0.00 3.73
973 978 2.247358 GAACACATTGGGGATGTTGGT 58.753 47.619 0.00 0.00 46.80 3.67
995 1000 4.864704 TTTTACCTCTTGGCCATTTCAC 57.135 40.909 6.09 0.00 36.63 3.18
1038 1043 7.989416 AAATGAAAAGGCACATGAAAATCAT 57.011 28.000 0.00 0.00 37.65 2.45
1077 1082 5.963176 ACAAAAGACATGCACATCACATA 57.037 34.783 0.00 0.00 0.00 2.29
1096 1101 9.676195 CACACTACATACATCAAATTTGAACAA 57.324 29.630 23.91 12.51 41.13 2.83
1103 1108 8.843262 CATCATCCACACTACATACATCAAATT 58.157 33.333 0.00 0.00 0.00 1.82
1110 1115 8.806429 AAAAATCATCATCCACACTACATACA 57.194 30.769 0.00 0.00 0.00 2.29
1148 1153 6.091305 TGCATATTCTTGAGACGAAACTTCTG 59.909 38.462 0.00 0.00 0.00 3.02
1156 1161 3.056179 TGTGGTGCATATTCTTGAGACGA 60.056 43.478 0.00 0.00 0.00 4.20
1261 1284 2.302733 ACCAATTTTCTTCCATGCACCC 59.697 45.455 0.00 0.00 0.00 4.61
1336 1361 1.977854 TGTGCCCTGAAGTACTCACAT 59.022 47.619 8.34 0.00 30.58 3.21
1399 1424 6.488769 TCCACCAATATAGTTTACCATCGT 57.511 37.500 0.00 0.00 0.00 3.73
1482 1507 3.326747 ACAGTCACTTTATCTTCGGCAC 58.673 45.455 0.00 0.00 0.00 5.01
1656 1687 2.906691 CATCCAACAAGGGTGCAAAA 57.093 45.000 0.00 0.00 42.79 2.44
1744 1775 1.031571 TGCATCGCCAACCAAGATCC 61.032 55.000 0.00 0.00 0.00 3.36
1767 1798 3.254166 GCACCATCATGAGTGTCAACTTT 59.746 43.478 14.52 0.00 36.52 2.66
1779 1811 1.250328 ACACTTGGTGCACCATCATG 58.750 50.000 37.97 32.73 46.97 3.07
1816 1850 1.286305 AACTGAGTTGGGTGTGGGGT 61.286 55.000 0.00 0.00 0.00 4.95
1843 1880 1.362584 TCTTCCTCCCATCAGACCTCA 59.637 52.381 0.00 0.00 0.00 3.86
1998 2062 1.595993 CGGCGTTCTCCTCTCCTCAA 61.596 60.000 0.00 0.00 0.00 3.02
1999 2063 2.046864 CGGCGTTCTCCTCTCCTCA 61.047 63.158 0.00 0.00 0.00 3.86
2015 2079 0.175989 GCCCTACTCTTCTTGGTCGG 59.824 60.000 0.00 0.00 0.00 4.79
2029 2093 2.461695 CTCTCCTCAAACTCAGCCCTA 58.538 52.381 0.00 0.00 0.00 3.53
2035 2099 1.625818 GCCTTCCTCTCCTCAAACTCA 59.374 52.381 0.00 0.00 0.00 3.41
2092 2157 3.430790 GGGCCCATGAACATAAGCTTTTC 60.431 47.826 19.95 3.03 0.00 2.29
2140 2206 7.537715 TGAATGTGCATAAGTTCAAAGTATGG 58.462 34.615 0.00 0.00 0.00 2.74
2166 2232 1.104577 TTGACCTTTCGGCCAACACC 61.105 55.000 2.24 0.00 0.00 4.16
2188 2254 1.618837 CGAACCTCCCAAGAAGTCTCA 59.381 52.381 0.00 0.00 0.00 3.27
2192 2258 0.977395 CTCCGAACCTCCCAAGAAGT 59.023 55.000 0.00 0.00 0.00 3.01
2207 2305 4.511246 ATGCCACCCATGCCTCCG 62.511 66.667 0.00 0.00 31.48 4.63
2313 2414 7.765695 TGTGCTTTCATAAGATTTTTCCTCT 57.234 32.000 0.00 0.00 32.92 3.69
2314 2415 8.031277 ACATGTGCTTTCATAAGATTTTTCCTC 58.969 33.333 0.00 0.00 32.92 3.71
2316 2417 8.538409 AACATGTGCTTTCATAAGATTTTTCC 57.462 30.769 0.00 0.00 32.92 3.13
2317 2418 8.650714 GGAACATGTGCTTTCATAAGATTTTTC 58.349 33.333 3.21 0.00 32.92 2.29
2318 2419 8.370182 AGGAACATGTGCTTTCATAAGATTTTT 58.630 29.630 3.21 0.00 32.92 1.94
2319 2420 7.899973 AGGAACATGTGCTTTCATAAGATTTT 58.100 30.769 3.21 0.00 32.92 1.82
2320 2421 7.472334 AGGAACATGTGCTTTCATAAGATTT 57.528 32.000 3.21 0.00 32.92 2.17
2321 2422 7.472334 AAGGAACATGTGCTTTCATAAGATT 57.528 32.000 3.21 0.00 33.36 2.40
2322 2423 8.757982 ATAAGGAACATGTGCTTTCATAAGAT 57.242 30.769 4.10 0.00 39.00 2.40
2323 2424 9.679661 TTATAAGGAACATGTGCTTTCATAAGA 57.320 29.630 4.10 0.00 39.00 2.10
2351 2452 6.954487 AACTTTCGACCACCTTTTAGATTT 57.046 33.333 0.00 0.00 0.00 2.17
2368 2469 7.439157 ACTAATACCGGGTTTACAAACTTTC 57.561 36.000 4.31 0.00 38.89 2.62
2369 2470 7.822161 AACTAATACCGGGTTTACAAACTTT 57.178 32.000 4.31 0.00 38.89 2.66
2381 2482 5.970317 AACTTCCAAAAACTAATACCGGG 57.030 39.130 6.32 0.00 0.00 5.73
2404 2505 2.358619 CCCTTCCATTGCCCCGAA 59.641 61.111 0.00 0.00 0.00 4.30
2421 2522 0.746204 GGCCTGAGCTTTCTACCAGC 60.746 60.000 0.00 0.00 39.73 4.85
2433 2534 0.035056 CTACTTGGGGTTGGCCTGAG 60.035 60.000 3.32 0.00 34.45 3.35
2435 2536 1.000896 CCTACTTGGGGTTGGCCTG 60.001 63.158 3.32 0.00 34.42 4.85
2436 2537 3.508048 CCTACTTGGGGTTGGCCT 58.492 61.111 3.32 0.00 34.42 5.19
2442 2543 1.465387 ACCCTTGCCTACTTGGGGT 60.465 57.895 0.00 0.00 44.66 4.95
2449 2550 8.232913 TGATGAAAATATTTACCCTTGCCTAC 57.767 34.615 0.01 0.00 0.00 3.18
2460 2561 7.795482 ATCGGTCGGTTGATGAAAATATTTA 57.205 32.000 0.01 0.00 0.00 1.40
2465 2566 5.588648 ACAATATCGGTCGGTTGATGAAAAT 59.411 36.000 9.57 0.00 0.00 1.82
2482 2583 4.106197 GCTATCGACCGATCCACAATATC 58.894 47.826 8.28 0.00 36.17 1.63
2496 2597 2.353607 CTCGCGTGGGCTATCGAC 60.354 66.667 5.77 0.00 36.88 4.20
2526 2627 3.815962 AGCTTCATAGAGCAAGCATGATG 59.184 43.478 0.00 0.00 46.37 3.07
2530 2631 3.555527 TGAGCTTCATAGAGCAAGCAT 57.444 42.857 6.93 0.00 46.37 3.79
2544 2645 4.107051 GGCAACGCGCATGAGCTT 62.107 61.111 19.47 7.29 45.17 3.74
2589 2690 9.703892 TGACTCGGTCTATACTTAGTCTATTAC 57.296 37.037 0.00 0.00 37.79 1.89
2595 2696 5.764192 ACCATGACTCGGTCTATACTTAGTC 59.236 44.000 0.00 0.00 37.61 2.59
2596 2697 5.692928 ACCATGACTCGGTCTATACTTAGT 58.307 41.667 0.00 0.00 33.15 2.24
2597 2698 6.128227 GCTACCATGACTCGGTCTATACTTAG 60.128 46.154 0.00 0.00 37.99 2.18
2598 2699 5.704515 GCTACCATGACTCGGTCTATACTTA 59.295 44.000 0.00 0.00 37.99 2.24
2599 2700 4.519730 GCTACCATGACTCGGTCTATACTT 59.480 45.833 0.00 0.00 37.99 2.24
2600 2701 4.073549 GCTACCATGACTCGGTCTATACT 58.926 47.826 0.00 0.00 37.99 2.12
2601 2702 3.819337 TGCTACCATGACTCGGTCTATAC 59.181 47.826 0.00 0.00 37.99 1.47
2602 2703 3.819337 GTGCTACCATGACTCGGTCTATA 59.181 47.826 0.00 0.00 37.99 1.31
2603 2704 2.623889 GTGCTACCATGACTCGGTCTAT 59.376 50.000 0.00 0.00 37.99 1.98
2604 2705 2.022195 GTGCTACCATGACTCGGTCTA 58.978 52.381 0.00 0.00 37.99 2.59
2605 2706 0.818296 GTGCTACCATGACTCGGTCT 59.182 55.000 0.00 0.00 37.99 3.85
2606 2707 0.530744 TGTGCTACCATGACTCGGTC 59.469 55.000 0.00 0.00 37.99 4.79
2613 2714 1.990424 CCCCTGTGTGCTACCATGA 59.010 57.895 0.00 0.00 0.00 3.07
2638 2739 4.681074 TTTCACAATTTTGGAGGGGTTC 57.319 40.909 0.00 0.00 0.00 3.62
2640 2741 6.755542 TTTATTTCACAATTTTGGAGGGGT 57.244 33.333 0.00 0.00 0.00 4.95
2751 2855 0.105760 TGGGGTGCCACAGTTCAAAT 60.106 50.000 0.00 0.00 0.00 2.32
2795 2899 0.250727 TTAAGAGGCTGTGGGTGCAC 60.251 55.000 8.80 8.80 0.00 4.57
2808 2912 2.682269 GCAGGAGAGGGCCTTTTAAGAG 60.682 54.545 7.89 0.00 35.66 2.85
2810 2914 1.756430 GCAGGAGAGGGCCTTTTAAG 58.244 55.000 7.89 0.00 35.66 1.85
2828 2932 4.133796 GCACCATCCCTTTGCCGC 62.134 66.667 0.00 0.00 0.00 6.53
2838 2942 2.087646 GAAAGGTGGAGAAGCACCATC 58.912 52.381 0.00 0.00 43.61 3.51
2842 2946 0.609406 GGGGAAAGGTGGAGAAGCAC 60.609 60.000 0.00 0.00 0.00 4.40
2869 2973 2.925966 ATTTCCTTCAATCCCTGCCA 57.074 45.000 0.00 0.00 0.00 4.92
2879 2983 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
2892 2996 7.881775 AACAACTTTATTATTGCCTCTAGGG 57.118 36.000 0.00 0.00 35.18 3.53
2952 3056 9.851686 TCCAGTTAATACAATTCTAGCATGAAT 57.148 29.630 0.00 0.00 38.19 2.57
2953 3057 9.679661 TTCCAGTTAATACAATTCTAGCATGAA 57.320 29.630 0.00 0.00 0.00 2.57
2954 3058 9.679661 TTTCCAGTTAATACAATTCTAGCATGA 57.320 29.630 0.00 0.00 0.00 3.07
2955 3059 9.722056 GTTTCCAGTTAATACAATTCTAGCATG 57.278 33.333 0.00 0.00 0.00 4.06
2956 3060 9.686683 AGTTTCCAGTTAATACAATTCTAGCAT 57.313 29.630 0.00 0.00 0.00 3.79
2957 3061 9.515226 AAGTTTCCAGTTAATACAATTCTAGCA 57.485 29.630 0.00 0.00 0.00 3.49
2969 3073 8.999431 CACACATGTACTAAGTTTCCAGTTAAT 58.001 33.333 0.00 0.00 0.00 1.40
2970 3074 8.205512 TCACACATGTACTAAGTTTCCAGTTAA 58.794 33.333 0.00 0.00 0.00 2.01
2971 3075 7.728148 TCACACATGTACTAAGTTTCCAGTTA 58.272 34.615 0.00 0.00 0.00 2.24
2972 3076 6.588204 TCACACATGTACTAAGTTTCCAGTT 58.412 36.000 0.00 0.00 0.00 3.16
2973 3077 6.169557 TCACACATGTACTAAGTTTCCAGT 57.830 37.500 0.00 0.00 0.00 4.00
2974 3078 7.672983 ATTCACACATGTACTAAGTTTCCAG 57.327 36.000 0.00 0.00 0.00 3.86
3001 3105 9.424319 CATACTAGTGACACTTTGTTTGTCTAT 57.576 33.333 14.50 0.80 43.30 1.98
3002 3106 7.384115 GCATACTAGTGACACTTTGTTTGTCTA 59.616 37.037 14.50 0.00 43.30 2.59
3003 3107 6.202954 GCATACTAGTGACACTTTGTTTGTCT 59.797 38.462 14.50 0.00 43.30 3.41
3004 3108 6.363473 GCATACTAGTGACACTTTGTTTGTC 58.637 40.000 14.50 10.38 43.22 3.18
3005 3109 5.238650 GGCATACTAGTGACACTTTGTTTGT 59.761 40.000 14.50 6.39 0.00 2.83
3006 3110 5.470098 AGGCATACTAGTGACACTTTGTTTG 59.530 40.000 14.50 17.08 0.00 2.93
3007 3111 5.621193 AGGCATACTAGTGACACTTTGTTT 58.379 37.500 14.50 6.06 0.00 2.83
3008 3112 5.012148 AGAGGCATACTAGTGACACTTTGTT 59.988 40.000 14.50 0.00 0.00 2.83
3009 3113 4.528596 AGAGGCATACTAGTGACACTTTGT 59.471 41.667 14.50 14.92 0.00 2.83
3010 3114 5.078411 AGAGGCATACTAGTGACACTTTG 57.922 43.478 14.50 9.81 0.00 2.77
3011 3115 5.952947 AGTAGAGGCATACTAGTGACACTTT 59.047 40.000 14.50 4.04 34.21 2.66
3012 3116 5.511363 AGTAGAGGCATACTAGTGACACTT 58.489 41.667 14.50 0.00 34.21 3.16
3013 3117 5.118729 AGTAGAGGCATACTAGTGACACT 57.881 43.478 13.68 13.68 34.21 3.55
3014 3118 5.357314 TCAAGTAGAGGCATACTAGTGACAC 59.643 44.000 5.39 0.00 34.90 3.67
3015 3119 5.357314 GTCAAGTAGAGGCATACTAGTGACA 59.643 44.000 19.41 0.00 40.28 3.58
3016 3120 5.591067 AGTCAAGTAGAGGCATACTAGTGAC 59.409 44.000 17.97 17.97 40.57 3.67
3017 3121 5.756918 AGTCAAGTAGAGGCATACTAGTGA 58.243 41.667 5.39 2.59 34.90 3.41
3018 3122 6.293735 GCTAGTCAAGTAGAGGCATACTAGTG 60.294 46.154 5.39 0.00 38.02 2.74
3019 3123 5.766174 GCTAGTCAAGTAGAGGCATACTAGT 59.234 44.000 0.00 0.00 38.02 2.57
3020 3124 6.001460 AGCTAGTCAAGTAGAGGCATACTAG 58.999 44.000 0.00 0.00 38.50 2.57
3021 3125 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
3022 3126 4.798882 AGCTAGTCAAGTAGAGGCATACT 58.201 43.478 0.00 0.00 37.61 2.12
3023 3127 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
3024 3128 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
3025 3129 2.621055 CGAGCTAGTCAAGTAGAGGCAT 59.379 50.000 0.00 0.00 0.00 4.40
3026 3130 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
3027 3131 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
3028 3132 3.690139 TCAACGAGCTAGTCAAGTAGAGG 59.310 47.826 0.00 0.00 0.00 3.69
3029 3133 4.948608 TCAACGAGCTAGTCAAGTAGAG 57.051 45.455 0.00 0.00 0.00 2.43
3030 3134 5.414765 TGATTCAACGAGCTAGTCAAGTAGA 59.585 40.000 0.00 0.00 0.00 2.59
3031 3135 5.641709 TGATTCAACGAGCTAGTCAAGTAG 58.358 41.667 0.00 0.00 0.00 2.57
3032 3136 5.638596 TGATTCAACGAGCTAGTCAAGTA 57.361 39.130 0.00 0.00 0.00 2.24
3033 3137 4.521130 TGATTCAACGAGCTAGTCAAGT 57.479 40.909 0.00 0.00 0.00 3.16
3034 3138 5.635280 TCTTTGATTCAACGAGCTAGTCAAG 59.365 40.000 0.00 0.00 0.00 3.02
3035 3139 5.538118 TCTTTGATTCAACGAGCTAGTCAA 58.462 37.500 0.00 0.00 0.00 3.18
3036 3140 5.134202 TCTTTGATTCAACGAGCTAGTCA 57.866 39.130 0.00 0.00 0.00 3.41
3037 3141 5.006165 CCATCTTTGATTCAACGAGCTAGTC 59.994 44.000 10.80 0.00 0.00 2.59
3038 3142 4.872691 CCATCTTTGATTCAACGAGCTAGT 59.127 41.667 10.80 0.00 0.00 2.57
3039 3143 4.872691 ACCATCTTTGATTCAACGAGCTAG 59.127 41.667 10.80 0.00 0.00 3.42
3040 3144 4.832248 ACCATCTTTGATTCAACGAGCTA 58.168 39.130 10.80 0.00 0.00 3.32
3041 3145 3.679389 ACCATCTTTGATTCAACGAGCT 58.321 40.909 10.80 0.00 0.00 4.09
3042 3146 4.425577 AACCATCTTTGATTCAACGAGC 57.574 40.909 10.80 0.00 0.00 5.03
3043 3147 7.133891 ACTTAACCATCTTTGATTCAACGAG 57.866 36.000 10.80 2.43 0.00 4.18
3044 3148 7.504924 AACTTAACCATCTTTGATTCAACGA 57.495 32.000 7.90 7.90 0.00 3.85
3045 3149 7.326063 GGAAACTTAACCATCTTTGATTCAACG 59.674 37.037 0.00 0.00 0.00 4.10
3046 3150 8.360390 AGGAAACTTAACCATCTTTGATTCAAC 58.640 33.333 0.00 0.00 37.44 3.18
3047 3151 8.477419 AGGAAACTTAACCATCTTTGATTCAA 57.523 30.769 0.00 0.00 37.44 2.69
3048 3152 9.581289 TTAGGAAACTTAACCATCTTTGATTCA 57.419 29.630 0.00 0.00 43.67 2.57
3049 3153 9.841880 GTTAGGAAACTTAACCATCTTTGATTC 57.158 33.333 0.00 0.00 43.67 2.52
3050 3154 8.803235 GGTTAGGAAACTTAACCATCTTTGATT 58.197 33.333 14.78 0.00 43.67 2.57
3051 3155 7.947890 TGGTTAGGAAACTTAACCATCTTTGAT 59.052 33.333 17.28 0.00 43.20 2.57
3052 3156 7.291566 TGGTTAGGAAACTTAACCATCTTTGA 58.708 34.615 17.28 0.00 43.20 2.69
3053 3157 7.519032 TGGTTAGGAAACTTAACCATCTTTG 57.481 36.000 17.28 0.00 43.20 2.77
3060 3164 8.044908 TCATGTCTATGGTTAGGAAACTTAACC 58.955 37.037 13.40 13.40 41.02 2.85
3061 3165 9.099454 CTCATGTCTATGGTTAGGAAACTTAAC 57.901 37.037 0.00 0.00 37.07 2.01
3062 3166 8.822805 ACTCATGTCTATGGTTAGGAAACTTAA 58.177 33.333 0.00 0.00 37.07 1.85
3063 3167 8.375493 ACTCATGTCTATGGTTAGGAAACTTA 57.625 34.615 0.00 0.00 37.07 2.24
3064 3168 7.259088 ACTCATGTCTATGGTTAGGAAACTT 57.741 36.000 0.00 0.00 37.07 2.66
3065 3169 6.875972 ACTCATGTCTATGGTTAGGAAACT 57.124 37.500 0.00 0.00 38.55 2.66
3066 3170 6.879458 ACAACTCATGTCTATGGTTAGGAAAC 59.121 38.462 0.00 0.00 37.96 2.78
3067 3171 7.016153 ACAACTCATGTCTATGGTTAGGAAA 57.984 36.000 0.00 0.00 37.96 3.13
3068 3172 6.620877 ACAACTCATGTCTATGGTTAGGAA 57.379 37.500 0.00 0.00 37.96 3.36
3081 3185 7.396907 TCCCATTAATCAAATGACAACTCATGT 59.603 33.333 0.00 0.00 46.81 3.21
3082 3186 7.774134 TCCCATTAATCAAATGACAACTCATG 58.226 34.615 0.00 0.00 46.81 3.07
3083 3187 7.959658 TCCCATTAATCAAATGACAACTCAT 57.040 32.000 0.00 0.00 46.81 2.90
3084 3188 7.614974 TGATCCCATTAATCAAATGACAACTCA 59.385 33.333 0.00 0.00 46.81 3.41
3085 3189 7.917505 GTGATCCCATTAATCAAATGACAACTC 59.082 37.037 0.00 0.00 46.81 3.01
3086 3190 7.396907 TGTGATCCCATTAATCAAATGACAACT 59.603 33.333 0.00 0.00 46.81 3.16
3087 3191 7.546358 TGTGATCCCATTAATCAAATGACAAC 58.454 34.615 0.00 0.00 46.81 3.32
3088 3192 7.715266 TGTGATCCCATTAATCAAATGACAA 57.285 32.000 0.00 0.00 46.81 3.18
3089 3193 7.560626 TGATGTGATCCCATTAATCAAATGACA 59.439 33.333 0.00 0.00 46.81 3.58
3090 3194 7.944061 TGATGTGATCCCATTAATCAAATGAC 58.056 34.615 0.00 0.00 46.81 3.06
3091 3195 8.715190 ATGATGTGATCCCATTAATCAAATGA 57.285 30.769 0.00 0.00 46.81 2.57
3094 3198 9.865152 TCTAATGATGTGATCCCATTAATCAAA 57.135 29.630 0.00 0.00 35.04 2.69
3095 3199 9.511272 CTCTAATGATGTGATCCCATTAATCAA 57.489 33.333 0.00 0.00 35.04 2.57
3096 3200 8.883302 TCTCTAATGATGTGATCCCATTAATCA 58.117 33.333 0.00 0.00 33.84 2.57
3097 3201 9.730705 TTCTCTAATGATGTGATCCCATTAATC 57.269 33.333 0.00 0.00 33.84 1.75
3099 3203 9.511272 CATTCTCTAATGATGTGATCCCATTAA 57.489 33.333 0.00 0.00 44.50 1.40
3100 3204 8.883302 TCATTCTCTAATGATGTGATCCCATTA 58.117 33.333 0.00 0.00 45.17 1.90
3101 3205 7.752638 TCATTCTCTAATGATGTGATCCCATT 58.247 34.615 0.00 0.00 45.17 3.16
3102 3206 7.325725 TCATTCTCTAATGATGTGATCCCAT 57.674 36.000 0.00 0.00 45.17 4.00
3103 3207 6.752285 TCATTCTCTAATGATGTGATCCCA 57.248 37.500 0.00 0.00 45.17 4.37
3114 3218 9.106070 TCAAGTCAATCACATCATTCTCTAATG 57.894 33.333 0.00 0.00 43.32 1.90
3115 3219 9.107177 GTCAAGTCAATCACATCATTCTCTAAT 57.893 33.333 0.00 0.00 0.00 1.73
3116 3220 7.550551 GGTCAAGTCAATCACATCATTCTCTAA 59.449 37.037 0.00 0.00 0.00 2.10
3117 3221 7.044181 GGTCAAGTCAATCACATCATTCTCTA 58.956 38.462 0.00 0.00 0.00 2.43
3118 3222 5.879223 GGTCAAGTCAATCACATCATTCTCT 59.121 40.000 0.00 0.00 0.00 3.10
3119 3223 5.065731 GGGTCAAGTCAATCACATCATTCTC 59.934 44.000 0.00 0.00 0.00 2.87
3120 3224 4.946157 GGGTCAAGTCAATCACATCATTCT 59.054 41.667 0.00 0.00 0.00 2.40
3121 3225 4.701651 TGGGTCAAGTCAATCACATCATTC 59.298 41.667 0.00 0.00 0.00 2.67
3122 3226 4.665451 TGGGTCAAGTCAATCACATCATT 58.335 39.130 0.00 0.00 0.00 2.57
3123 3227 4.305539 TGGGTCAAGTCAATCACATCAT 57.694 40.909 0.00 0.00 0.00 2.45
3124 3228 3.786368 TGGGTCAAGTCAATCACATCA 57.214 42.857 0.00 0.00 0.00 3.07
3125 3229 3.629398 GGATGGGTCAAGTCAATCACATC 59.371 47.826 0.00 0.00 34.33 3.06
3126 3230 3.010472 TGGATGGGTCAAGTCAATCACAT 59.990 43.478 0.00 0.00 0.00 3.21
3127 3231 2.374839 TGGATGGGTCAAGTCAATCACA 59.625 45.455 0.00 0.00 0.00 3.58
3128 3232 3.071874 TGGATGGGTCAAGTCAATCAC 57.928 47.619 0.00 0.00 0.00 3.06
3129 3233 4.320546 AATGGATGGGTCAAGTCAATCA 57.679 40.909 0.00 0.00 0.00 2.57
3130 3234 4.276926 GCTAATGGATGGGTCAAGTCAATC 59.723 45.833 0.00 0.00 0.00 2.67
3131 3235 4.079558 AGCTAATGGATGGGTCAAGTCAAT 60.080 41.667 0.00 0.00 0.00 2.57
3132 3236 3.266772 AGCTAATGGATGGGTCAAGTCAA 59.733 43.478 0.00 0.00 0.00 3.18
3133 3237 2.846206 AGCTAATGGATGGGTCAAGTCA 59.154 45.455 0.00 0.00 0.00 3.41
3134 3238 3.567478 AGCTAATGGATGGGTCAAGTC 57.433 47.619 0.00 0.00 0.00 3.01
3135 3239 4.687219 GCTAAGCTAATGGATGGGTCAAGT 60.687 45.833 0.00 0.00 0.00 3.16
3136 3240 3.817647 GCTAAGCTAATGGATGGGTCAAG 59.182 47.826 0.00 0.00 0.00 3.02
3137 3241 3.201930 TGCTAAGCTAATGGATGGGTCAA 59.798 43.478 0.00 0.00 0.00 3.18
3138 3242 2.777114 TGCTAAGCTAATGGATGGGTCA 59.223 45.455 0.00 0.00 0.00 4.02
3139 3243 3.142174 GTGCTAAGCTAATGGATGGGTC 58.858 50.000 0.00 0.00 0.00 4.46
3140 3244 2.485479 CGTGCTAAGCTAATGGATGGGT 60.485 50.000 0.00 0.00 0.00 4.51
3141 3245 2.146342 CGTGCTAAGCTAATGGATGGG 58.854 52.381 0.00 0.00 0.00 4.00
3142 3246 3.111853 TCGTGCTAAGCTAATGGATGG 57.888 47.619 0.00 0.00 0.00 3.51
3143 3247 4.309933 TCATCGTGCTAAGCTAATGGATG 58.690 43.478 0.00 0.00 33.22 3.51
3144 3248 4.607293 TCATCGTGCTAAGCTAATGGAT 57.393 40.909 0.00 0.00 0.00 3.41
3145 3249 4.560128 GATCATCGTGCTAAGCTAATGGA 58.440 43.478 0.00 0.00 0.00 3.41
3146 3250 3.366121 CGATCATCGTGCTAAGCTAATGG 59.634 47.826 0.00 0.00 34.72 3.16
3147 3251 4.558835 CGATCATCGTGCTAAGCTAATG 57.441 45.455 0.00 0.00 34.72 1.90
3160 3264 4.957971 AGCAACAAACTAAACGATCATCG 58.042 39.130 5.22 5.22 46.93 3.84
3161 3265 7.044706 GCAATAGCAACAAACTAAACGATCATC 60.045 37.037 0.00 0.00 41.58 2.92
3162 3266 6.747280 GCAATAGCAACAAACTAAACGATCAT 59.253 34.615 0.00 0.00 41.58 2.45
3163 3267 6.072728 AGCAATAGCAACAAACTAAACGATCA 60.073 34.615 0.00 0.00 45.49 2.92
3164 3268 6.314784 AGCAATAGCAACAAACTAAACGATC 58.685 36.000 0.00 0.00 45.49 3.69
3165 3269 6.254281 AGCAATAGCAACAAACTAAACGAT 57.746 33.333 0.00 0.00 45.49 3.73
3166 3270 5.682943 AGCAATAGCAACAAACTAAACGA 57.317 34.783 0.00 0.00 45.49 3.85
3167 3271 6.636850 AGAAAGCAATAGCAACAAACTAAACG 59.363 34.615 0.00 0.00 45.49 3.60
3168 3272 7.114953 GGAGAAAGCAATAGCAACAAACTAAAC 59.885 37.037 0.00 0.00 45.49 2.01
3169 3273 7.145323 GGAGAAAGCAATAGCAACAAACTAAA 58.855 34.615 0.00 0.00 45.49 1.85
3170 3274 6.264292 TGGAGAAAGCAATAGCAACAAACTAA 59.736 34.615 0.00 0.00 45.49 2.24
3171 3275 5.767665 TGGAGAAAGCAATAGCAACAAACTA 59.232 36.000 0.00 0.00 45.49 2.24
3172 3276 4.584325 TGGAGAAAGCAATAGCAACAAACT 59.416 37.500 0.00 0.00 45.49 2.66
3173 3277 4.870363 TGGAGAAAGCAATAGCAACAAAC 58.130 39.130 0.00 0.00 45.49 2.93
3174 3278 5.726980 ATGGAGAAAGCAATAGCAACAAA 57.273 34.783 0.00 0.00 45.49 2.83
3175 3279 6.434028 AGTTATGGAGAAAGCAATAGCAACAA 59.566 34.615 0.00 0.00 45.49 2.83
3176 3280 5.945784 AGTTATGGAGAAAGCAATAGCAACA 59.054 36.000 0.00 0.00 45.49 3.33
3177 3281 6.442513 AGTTATGGAGAAAGCAATAGCAAC 57.557 37.500 0.00 0.00 45.49 4.17
3178 3282 9.273016 GTATAGTTATGGAGAAAGCAATAGCAA 57.727 33.333 0.00 0.00 45.49 3.91
3179 3283 8.428852 TGTATAGTTATGGAGAAAGCAATAGCA 58.571 33.333 0.00 0.00 45.49 3.49
3180 3284 8.833231 TGTATAGTTATGGAGAAAGCAATAGC 57.167 34.615 0.00 0.00 42.56 2.97
3183 3287 9.632638 AACATGTATAGTTATGGAGAAAGCAAT 57.367 29.630 0.00 0.00 0.00 3.56
3184 3288 9.109393 GAACATGTATAGTTATGGAGAAAGCAA 57.891 33.333 0.00 0.00 0.00 3.91
3185 3289 7.715249 GGAACATGTATAGTTATGGAGAAAGCA 59.285 37.037 0.00 0.00 0.00 3.91
3186 3290 7.934120 AGGAACATGTATAGTTATGGAGAAAGC 59.066 37.037 0.00 0.00 0.00 3.51
3190 3294 9.822727 TCATAGGAACATGTATAGTTATGGAGA 57.177 33.333 0.00 0.00 0.00 3.71
3191 3295 9.862371 GTCATAGGAACATGTATAGTTATGGAG 57.138 37.037 0.00 0.00 0.00 3.86
3192 3296 9.601810 AGTCATAGGAACATGTATAGTTATGGA 57.398 33.333 0.00 0.00 0.00 3.41
3198 3302 8.744652 GCTCATAGTCATAGGAACATGTATAGT 58.255 37.037 0.00 0.00 0.00 2.12
3199 3303 8.965819 AGCTCATAGTCATAGGAACATGTATAG 58.034 37.037 0.00 0.00 0.00 1.31
3200 3304 8.885693 AGCTCATAGTCATAGGAACATGTATA 57.114 34.615 0.00 0.00 0.00 1.47
3201 3305 7.452813 TGAGCTCATAGTCATAGGAACATGTAT 59.547 37.037 13.74 0.00 0.00 2.29
3202 3306 6.777580 TGAGCTCATAGTCATAGGAACATGTA 59.222 38.462 13.74 0.00 0.00 2.29
3203 3307 5.600069 TGAGCTCATAGTCATAGGAACATGT 59.400 40.000 13.74 0.00 0.00 3.21
3204 3308 6.094193 TGAGCTCATAGTCATAGGAACATG 57.906 41.667 13.74 0.00 0.00 3.21
3205 3309 6.699366 CATGAGCTCATAGTCATAGGAACAT 58.301 40.000 28.27 0.00 34.26 2.71
3206 3310 5.510349 GCATGAGCTCATAGTCATAGGAACA 60.510 44.000 28.27 0.00 37.91 3.18
3207 3311 4.928615 GCATGAGCTCATAGTCATAGGAAC 59.071 45.833 28.27 4.42 37.91 3.62
3208 3312 4.590222 TGCATGAGCTCATAGTCATAGGAA 59.410 41.667 28.27 5.94 42.74 3.36
3209 3313 4.154942 TGCATGAGCTCATAGTCATAGGA 58.845 43.478 28.27 12.95 42.74 2.94
3210 3314 4.532314 TGCATGAGCTCATAGTCATAGG 57.468 45.455 28.27 14.52 42.74 2.57
3211 3315 5.539979 AGTTGCATGAGCTCATAGTCATAG 58.460 41.667 28.27 15.23 42.74 2.23
3212 3316 5.510349 GGAGTTGCATGAGCTCATAGTCATA 60.510 44.000 28.27 13.50 42.74 2.15
3213 3317 4.378774 GAGTTGCATGAGCTCATAGTCAT 58.621 43.478 28.27 14.70 42.74 3.06
3214 3318 3.431346 GGAGTTGCATGAGCTCATAGTCA 60.431 47.826 28.27 21.49 42.74 3.41
3215 3319 3.129871 GGAGTTGCATGAGCTCATAGTC 58.870 50.000 28.27 22.63 42.74 2.59
3216 3320 2.158842 GGGAGTTGCATGAGCTCATAGT 60.159 50.000 28.27 16.18 42.74 2.12
3217 3321 2.492012 GGGAGTTGCATGAGCTCATAG 58.508 52.381 28.27 21.64 42.74 2.23
3218 3322 1.202568 CGGGAGTTGCATGAGCTCATA 60.203 52.381 28.27 12.05 42.74 2.15
3219 3323 0.463295 CGGGAGTTGCATGAGCTCAT 60.463 55.000 23.75 23.75 42.74 2.90
3220 3324 1.078918 CGGGAGTTGCATGAGCTCA 60.079 57.895 20.79 20.79 42.74 4.26
3221 3325 0.391661 TTCGGGAGTTGCATGAGCTC 60.392 55.000 6.82 6.82 42.74 4.09
3222 3326 0.254178 ATTCGGGAGTTGCATGAGCT 59.746 50.000 0.00 0.00 42.74 4.09
3223 3327 1.599542 GTATTCGGGAGTTGCATGAGC 59.400 52.381 0.00 0.00 42.57 4.26
3224 3328 2.213499 GGTATTCGGGAGTTGCATGAG 58.787 52.381 0.00 0.00 0.00 2.90
3225 3329 1.557371 TGGTATTCGGGAGTTGCATGA 59.443 47.619 0.00 0.00 0.00 3.07
3226 3330 1.942657 CTGGTATTCGGGAGTTGCATG 59.057 52.381 0.00 0.00 0.00 4.06
3227 3331 1.837439 TCTGGTATTCGGGAGTTGCAT 59.163 47.619 0.00 0.00 0.00 3.96
3228 3332 1.207089 CTCTGGTATTCGGGAGTTGCA 59.793 52.381 0.00 0.00 0.00 4.08
3229 3333 1.473434 CCTCTGGTATTCGGGAGTTGC 60.473 57.143 0.00 0.00 0.00 4.17
3230 3334 2.108168 TCCTCTGGTATTCGGGAGTTG 58.892 52.381 0.00 0.00 0.00 3.16
3231 3335 2.544844 TCCTCTGGTATTCGGGAGTT 57.455 50.000 0.00 0.00 0.00 3.01
3232 3336 2.544844 TTCCTCTGGTATTCGGGAGT 57.455 50.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.