Multiple sequence alignment - TraesCS1A01G211200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1A01G211200 chr1A 100.000 1391 0 0 1476 2866 374137257 374138647 0.000000e+00 2569.0
1 TraesCS1A01G211200 chr1A 100.000 1211 0 0 1 1211 374135782 374136992 0.000000e+00 2237.0
2 TraesCS1A01G211200 chr1D 90.652 1027 50 22 1476 2493 299757463 299758452 0.000000e+00 1323.0
3 TraesCS1A01G211200 chr1D 96.745 553 16 2 659 1211 299756836 299757386 0.000000e+00 920.0
4 TraesCS1A01G211200 chr1D 91.022 401 33 2 260 657 436968165 436967765 3.250000e-149 538.0
5 TraesCS1A01G211200 chr1D 89.641 251 15 5 11 260 299756595 299756835 2.770000e-80 309.0
6 TraesCS1A01G211200 chr1D 82.456 228 24 9 2639 2866 299761080 299761291 4.880000e-43 185.0
7 TraesCS1A01G211200 chr1D 89.908 109 10 1 2530 2638 299761008 299761115 3.850000e-29 139.0
8 TraesCS1A01G211200 chr1B 91.246 891 45 12 1476 2358 403976788 403977653 0.000000e+00 1182.0
9 TraesCS1A01G211200 chr1B 95.113 532 17 4 680 1211 403976159 403976681 0.000000e+00 830.0
10 TraesCS1A01G211200 chr1B 90.960 177 13 2 2358 2532 403977736 403977911 4.770000e-58 235.0
11 TraesCS1A01G211200 chr1B 80.952 84 12 4 2550 2631 584667158 584667239 2.380000e-06 63.9
12 TraesCS1A01G211200 chr7D 92.132 394 28 3 260 651 266697935 266698327 1.160000e-153 553.0
13 TraesCS1A01G211200 chr4B 91.709 398 32 1 260 656 390180305 390179908 4.170000e-153 551.0
14 TraesCS1A01G211200 chr4B 79.070 172 34 2 1699 1869 654728276 654728106 1.800000e-22 117.0
15 TraesCS1A01G211200 chr6B 91.899 395 28 4 260 651 364852215 364852608 1.500000e-152 549.0
16 TraesCS1A01G211200 chr3B 91.521 401 29 5 260 657 582121676 582121278 5.400000e-152 547.0
17 TraesCS1A01G211200 chr2B 91.878 394 29 3 260 651 192329379 192329771 5.400000e-152 547.0
18 TraesCS1A01G211200 chr2B 81.633 98 17 1 2533 2630 471439433 471439529 2.370000e-11 80.5
19 TraesCS1A01G211200 chr5A 91.457 398 32 2 262 658 205341395 205340999 1.940000e-151 545.0
20 TraesCS1A01G211200 chr5B 91.624 394 29 4 260 651 185083023 185082632 2.510000e-150 542.0
21 TraesCS1A01G211200 chr3A 91.228 399 32 3 260 657 469679382 469678986 9.030000e-150 540.0
22 TraesCS1A01G211200 chr4A 82.692 104 17 1 2533 2636 732856192 732856090 1.090000e-14 91.6
23 TraesCS1A01G211200 chr2A 83.117 77 13 0 2546 2622 195328761 195328685 1.420000e-08 71.3
24 TraesCS1A01G211200 chrUn 84.746 59 9 0 2533 2591 459694749 459694807 3.080000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1A01G211200 chr1A 374135782 374138647 2865 False 2403.0 2569 100.000000 1 2866 2 chr1A.!!$F1 2865
1 TraesCS1A01G211200 chr1D 299756595 299761291 4696 False 575.2 1323 89.880400 11 2866 5 chr1D.!!$F1 2855
2 TraesCS1A01G211200 chr1B 403976159 403977911 1752 False 749.0 1182 92.439667 680 2532 3 chr1B.!!$F2 1852

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
458 460 0.040204 AAGTGGGGAGGGATTTGCTG 59.96 55.0 0.0 0.0 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2031 2033 0.169672 TACCACAAGCTACGACTCGC 59.83 55.0 0.0 0.0 0.0 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 6.801539 TTGACTTATCGCAATCAGTTCTTT 57.198 33.333 0.00 0.00 0.00 2.52
55 56 4.574421 TCGCAATCAGTTCTTTCAACAGAA 59.426 37.500 0.00 0.00 0.00 3.02
57 58 5.172053 CGCAATCAGTTCTTTCAACAGAAAC 59.828 40.000 0.00 0.00 34.50 2.78
62 63 7.630242 TCAGTTCTTTCAACAGAAACAGAAT 57.370 32.000 0.00 0.00 34.50 2.40
189 191 5.006358 ACGGTTTCTACATCGCACATAATTC 59.994 40.000 0.00 0.00 0.00 2.17
190 192 5.006261 CGGTTTCTACATCGCACATAATTCA 59.994 40.000 0.00 0.00 0.00 2.57
217 219 7.423844 TCAAAGATGTGTGATAGGTGTATCT 57.576 36.000 0.00 0.00 36.70 1.98
218 220 7.851228 TCAAAGATGTGTGATAGGTGTATCTT 58.149 34.615 0.00 0.00 36.70 2.40
219 221 7.981789 TCAAAGATGTGTGATAGGTGTATCTTC 59.018 37.037 0.00 0.00 36.70 2.87
220 222 7.423844 AAGATGTGTGATAGGTGTATCTTCA 57.576 36.000 0.00 0.00 36.70 3.02
221 223 7.609097 AGATGTGTGATAGGTGTATCTTCAT 57.391 36.000 0.00 0.00 36.70 2.57
222 224 7.440198 AGATGTGTGATAGGTGTATCTTCATG 58.560 38.462 0.00 0.00 36.70 3.07
223 225 6.790232 TGTGTGATAGGTGTATCTTCATGA 57.210 37.500 0.00 0.00 36.70 3.07
224 226 6.809869 TGTGTGATAGGTGTATCTTCATGAG 58.190 40.000 0.00 0.00 36.70 2.90
225 227 6.381133 TGTGTGATAGGTGTATCTTCATGAGT 59.619 38.462 0.00 0.00 36.70 3.41
228 230 7.124147 TGTGATAGGTGTATCTTCATGAGTTCA 59.876 37.037 0.00 0.00 36.70 3.18
235 237 6.758416 GTGTATCTTCATGAGTTCATAGCACA 59.242 38.462 0.00 0.00 34.26 4.57
253 255 3.206150 CACAGTTTTGCACTAGTGTCCT 58.794 45.455 23.44 9.76 32.76 3.85
260 262 5.761165 TTTGCACTAGTGTCCTTTAAACC 57.239 39.130 23.44 4.01 0.00 3.27
261 263 4.699925 TGCACTAGTGTCCTTTAAACCT 57.300 40.909 23.44 0.00 0.00 3.50
262 264 4.385825 TGCACTAGTGTCCTTTAAACCTG 58.614 43.478 23.44 0.00 0.00 4.00
263 265 4.141574 TGCACTAGTGTCCTTTAAACCTGT 60.142 41.667 23.44 0.00 0.00 4.00
265 267 5.298527 GCACTAGTGTCCTTTAAACCTGTTT 59.701 40.000 23.44 0.45 36.63 2.83
266 268 6.725246 CACTAGTGTCCTTTAAACCTGTTTG 58.275 40.000 15.06 0.00 34.23 2.93
267 269 5.826208 ACTAGTGTCCTTTAAACCTGTTTGG 59.174 40.000 5.55 0.00 42.93 3.28
268 270 4.862371 AGTGTCCTTTAAACCTGTTTGGA 58.138 39.130 5.55 1.49 39.71 3.53
271 273 6.489022 AGTGTCCTTTAAACCTGTTTGGATAC 59.511 38.462 14.36 14.36 35.98 2.24
272 274 6.489022 GTGTCCTTTAAACCTGTTTGGATACT 59.511 38.462 14.67 0.00 34.49 2.12
273 275 6.713450 TGTCCTTTAAACCTGTTTGGATACTC 59.287 38.462 5.55 0.00 39.71 2.59
275 277 8.098912 GTCCTTTAAACCTGTTTGGATACTCTA 58.901 37.037 5.55 0.00 39.71 2.43
276 278 8.662255 TCCTTTAAACCTGTTTGGATACTCTAA 58.338 33.333 5.55 0.00 39.71 2.10
277 279 8.727910 CCTTTAAACCTGTTTGGATACTCTAAC 58.272 37.037 5.55 0.00 39.71 2.34
278 280 9.503399 CTTTAAACCTGTTTGGATACTCTAACT 57.497 33.333 5.55 0.00 39.71 2.24
279 281 9.856162 TTTAAACCTGTTTGGATACTCTAACTT 57.144 29.630 5.55 0.00 39.71 2.66
282 284 7.793948 ACCTGTTTGGATACTCTAACTTAGT 57.206 36.000 0.00 0.00 39.71 2.24
283 285 8.203681 ACCTGTTTGGATACTCTAACTTAGTT 57.796 34.615 2.32 2.32 39.71 2.24
284 286 9.317827 ACCTGTTTGGATACTCTAACTTAGTTA 57.682 33.333 4.66 4.66 39.71 2.24
285 287 9.804758 CCTGTTTGGATACTCTAACTTAGTTAG 57.195 37.037 22.24 22.24 41.36 2.34
318 320 9.791820 GAGTTAGATTCTAACTCTGAACTAACC 57.208 37.037 37.11 20.65 45.91 2.85
319 321 8.751242 AGTTAGATTCTAACTCTGAACTAACCC 58.249 37.037 26.36 3.79 37.89 4.11
320 322 8.751242 GTTAGATTCTAACTCTGAACTAACCCT 58.249 37.037 23.42 0.00 35.33 4.34
321 323 7.176589 AGATTCTAACTCTGAACTAACCCTG 57.823 40.000 0.00 0.00 0.00 4.45
322 324 6.954684 AGATTCTAACTCTGAACTAACCCTGA 59.045 38.462 0.00 0.00 0.00 3.86
323 325 6.989155 TTCTAACTCTGAACTAACCCTGAA 57.011 37.500 0.00 0.00 0.00 3.02
324 326 6.342338 TCTAACTCTGAACTAACCCTGAAC 57.658 41.667 0.00 0.00 0.00 3.18
325 327 6.075984 TCTAACTCTGAACTAACCCTGAACT 58.924 40.000 0.00 0.00 0.00 3.01
326 328 7.236529 TCTAACTCTGAACTAACCCTGAACTA 58.763 38.462 0.00 0.00 0.00 2.24
327 329 6.742559 AACTCTGAACTAACCCTGAACTAA 57.257 37.500 0.00 0.00 0.00 2.24
328 330 6.099159 ACTCTGAACTAACCCTGAACTAAC 57.901 41.667 0.00 0.00 0.00 2.34
329 331 5.839606 ACTCTGAACTAACCCTGAACTAACT 59.160 40.000 0.00 0.00 0.00 2.24
330 332 6.015265 ACTCTGAACTAACCCTGAACTAACTC 60.015 42.308 0.00 0.00 0.00 3.01
331 333 6.075984 TCTGAACTAACCCTGAACTAACTCT 58.924 40.000 0.00 0.00 0.00 3.24
332 334 7.236529 TCTGAACTAACCCTGAACTAACTCTA 58.763 38.462 0.00 0.00 0.00 2.43
333 335 7.393796 TCTGAACTAACCCTGAACTAACTCTAG 59.606 40.741 0.00 0.00 0.00 2.43
334 336 7.008941 TGAACTAACCCTGAACTAACTCTAGT 58.991 38.462 0.00 0.00 40.25 2.57
335 337 7.176340 TGAACTAACCCTGAACTAACTCTAGTC 59.824 40.741 0.00 0.00 37.39 2.59
336 338 6.550163 ACTAACCCTGAACTAACTCTAGTCA 58.450 40.000 0.00 0.00 37.39 3.41
337 339 7.008941 ACTAACCCTGAACTAACTCTAGTCAA 58.991 38.462 0.00 0.00 37.39 3.18
338 340 6.742559 AACCCTGAACTAACTCTAGTCAAA 57.257 37.500 0.00 0.00 37.39 2.69
339 341 6.742559 ACCCTGAACTAACTCTAGTCAAAA 57.257 37.500 0.00 0.00 37.39 2.44
340 342 7.133133 ACCCTGAACTAACTCTAGTCAAAAA 57.867 36.000 0.00 0.00 37.39 1.94
357 359 3.473923 AAAAAGTGTTTGGATGGCAGG 57.526 42.857 0.00 0.00 0.00 4.85
358 360 1.341080 AAAGTGTTTGGATGGCAGGG 58.659 50.000 0.00 0.00 0.00 4.45
359 361 0.188342 AAGTGTTTGGATGGCAGGGT 59.812 50.000 0.00 0.00 0.00 4.34
360 362 0.188342 AGTGTTTGGATGGCAGGGTT 59.812 50.000 0.00 0.00 0.00 4.11
361 363 1.427368 AGTGTTTGGATGGCAGGGTTA 59.573 47.619 0.00 0.00 0.00 2.85
362 364 1.818674 GTGTTTGGATGGCAGGGTTAG 59.181 52.381 0.00 0.00 0.00 2.34
363 365 1.707989 TGTTTGGATGGCAGGGTTAGA 59.292 47.619 0.00 0.00 0.00 2.10
364 366 2.311542 TGTTTGGATGGCAGGGTTAGAT 59.688 45.455 0.00 0.00 0.00 1.98
365 367 2.689983 GTTTGGATGGCAGGGTTAGATG 59.310 50.000 0.00 0.00 0.00 2.90
366 368 1.891933 TGGATGGCAGGGTTAGATGA 58.108 50.000 0.00 0.00 0.00 2.92
367 369 2.204463 TGGATGGCAGGGTTAGATGAA 58.796 47.619 0.00 0.00 0.00 2.57
368 370 2.173356 TGGATGGCAGGGTTAGATGAAG 59.827 50.000 0.00 0.00 0.00 3.02
369 371 2.225467 GATGGCAGGGTTAGATGAAGC 58.775 52.381 0.00 0.00 34.62 3.86
370 372 0.107703 TGGCAGGGTTAGATGAAGCG 60.108 55.000 0.00 0.00 36.33 4.68
371 373 0.107654 GGCAGGGTTAGATGAAGCGT 60.108 55.000 0.00 0.00 36.33 5.07
373 375 1.656652 CAGGGTTAGATGAAGCGTGG 58.343 55.000 2.21 0.00 44.07 4.94
374 376 1.207089 CAGGGTTAGATGAAGCGTGGA 59.793 52.381 2.21 0.00 44.07 4.02
375 377 2.119495 AGGGTTAGATGAAGCGTGGAT 58.881 47.619 0.00 0.00 36.33 3.41
376 378 3.069586 CAGGGTTAGATGAAGCGTGGATA 59.930 47.826 2.21 0.00 44.07 2.59
377 379 3.069729 AGGGTTAGATGAAGCGTGGATAC 59.930 47.826 0.00 0.00 36.33 2.24
386 388 2.352001 CGTGGATACGGCGAGACG 60.352 66.667 16.62 10.08 46.23 4.18
403 405 3.428282 GCCTTTACGGGCGGTGTG 61.428 66.667 8.08 0.00 42.82 3.82
404 406 2.344500 CCTTTACGGGCGGTGTGA 59.656 61.111 8.08 0.00 0.00 3.58
405 407 1.740296 CCTTTACGGGCGGTGTGAG 60.740 63.158 8.08 3.12 0.00 3.51
406 408 1.290955 CTTTACGGGCGGTGTGAGA 59.709 57.895 8.08 0.00 0.00 3.27
407 409 0.736325 CTTTACGGGCGGTGTGAGAG 60.736 60.000 8.08 0.00 0.00 3.20
408 410 2.162338 TTTACGGGCGGTGTGAGAGG 62.162 60.000 8.08 0.00 0.00 3.69
411 413 3.775654 GGGCGGTGTGAGAGGGAG 61.776 72.222 0.00 0.00 0.00 4.30
412 414 3.775654 GGCGGTGTGAGAGGGAGG 61.776 72.222 0.00 0.00 0.00 4.30
413 415 3.775654 GCGGTGTGAGAGGGAGGG 61.776 72.222 0.00 0.00 0.00 4.30
414 416 2.037367 CGGTGTGAGAGGGAGGGA 59.963 66.667 0.00 0.00 0.00 4.20
415 417 2.055042 CGGTGTGAGAGGGAGGGAG 61.055 68.421 0.00 0.00 0.00 4.30
416 418 1.687493 GGTGTGAGAGGGAGGGAGG 60.687 68.421 0.00 0.00 0.00 4.30
417 419 1.687493 GTGTGAGAGGGAGGGAGGG 60.687 68.421 0.00 0.00 0.00 4.30
418 420 1.862138 TGTGAGAGGGAGGGAGGGA 60.862 63.158 0.00 0.00 0.00 4.20
419 421 1.075600 GTGAGAGGGAGGGAGGGAG 60.076 68.421 0.00 0.00 0.00 4.30
420 422 1.230650 TGAGAGGGAGGGAGGGAGA 60.231 63.158 0.00 0.00 0.00 3.71
421 423 1.292941 TGAGAGGGAGGGAGGGAGAG 61.293 65.000 0.00 0.00 0.00 3.20
422 424 2.018086 AGAGGGAGGGAGGGAGAGG 61.018 68.421 0.00 0.00 0.00 3.69
423 425 2.015726 GAGGGAGGGAGGGAGAGGA 61.016 68.421 0.00 0.00 0.00 3.71
424 426 2.284151 GGGAGGGAGGGAGAGGAC 59.716 72.222 0.00 0.00 0.00 3.85
425 427 2.123640 GGAGGGAGGGAGAGGACG 60.124 72.222 0.00 0.00 0.00 4.79
426 428 2.691779 GGAGGGAGGGAGAGGACGA 61.692 68.421 0.00 0.00 0.00 4.20
427 429 1.152839 GAGGGAGGGAGAGGACGAG 60.153 68.421 0.00 0.00 0.00 4.18
428 430 1.619975 AGGGAGGGAGAGGACGAGA 60.620 63.158 0.00 0.00 0.00 4.04
429 431 1.215679 AGGGAGGGAGAGGACGAGAA 61.216 60.000 0.00 0.00 0.00 2.87
430 432 0.753848 GGGAGGGAGAGGACGAGAAG 60.754 65.000 0.00 0.00 0.00 2.85
431 433 1.388837 GGAGGGAGAGGACGAGAAGC 61.389 65.000 0.00 0.00 0.00 3.86
432 434 0.395173 GAGGGAGAGGACGAGAAGCT 60.395 60.000 0.00 0.00 0.00 3.74
433 435 0.040499 AGGGAGAGGACGAGAAGCTT 59.960 55.000 0.00 0.00 0.00 3.74
434 436 0.458260 GGGAGAGGACGAGAAGCTTC 59.542 60.000 19.11 19.11 0.00 3.86
435 437 0.099791 GGAGAGGACGAGAAGCTTCG 59.900 60.000 20.43 13.41 45.70 3.79
436 438 1.088306 GAGAGGACGAGAAGCTTCGA 58.912 55.000 20.43 0.00 43.03 3.71
437 439 1.063469 GAGAGGACGAGAAGCTTCGAG 59.937 57.143 20.43 19.25 43.03 4.04
438 440 1.088306 GAGGACGAGAAGCTTCGAGA 58.912 55.000 24.20 0.00 43.03 4.04
439 441 1.469308 GAGGACGAGAAGCTTCGAGAA 59.531 52.381 24.20 0.00 43.03 2.87
440 442 1.887198 AGGACGAGAAGCTTCGAGAAA 59.113 47.619 24.20 0.00 43.03 2.52
441 443 2.094957 AGGACGAGAAGCTTCGAGAAAG 60.095 50.000 24.20 14.50 43.03 2.62
442 444 2.351932 GGACGAGAAGCTTCGAGAAAGT 60.352 50.000 24.20 16.91 43.03 2.66
443 445 2.659279 GACGAGAAGCTTCGAGAAAGTG 59.341 50.000 24.20 11.53 43.03 3.16
444 446 1.989165 CGAGAAGCTTCGAGAAAGTGG 59.011 52.381 20.43 0.00 43.03 4.00
445 447 2.342179 GAGAAGCTTCGAGAAAGTGGG 58.658 52.381 20.43 0.00 37.31 4.61
446 448 1.002544 AGAAGCTTCGAGAAAGTGGGG 59.997 52.381 20.43 0.00 37.31 4.96
447 449 1.002087 GAAGCTTCGAGAAAGTGGGGA 59.998 52.381 11.40 0.00 37.31 4.81
448 450 0.610687 AGCTTCGAGAAAGTGGGGAG 59.389 55.000 0.00 0.00 37.31 4.30
449 451 0.391793 GCTTCGAGAAAGTGGGGAGG 60.392 60.000 0.00 0.00 37.31 4.30
450 452 0.250513 CTTCGAGAAAGTGGGGAGGG 59.749 60.000 0.00 0.00 0.00 4.30
451 453 0.178915 TTCGAGAAAGTGGGGAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
452 454 0.042731 TCGAGAAAGTGGGGAGGGAT 59.957 55.000 0.00 0.00 0.00 3.85
453 455 0.912486 CGAGAAAGTGGGGAGGGATT 59.088 55.000 0.00 0.00 0.00 3.01
454 456 1.282157 CGAGAAAGTGGGGAGGGATTT 59.718 52.381 0.00 0.00 0.00 2.17
455 457 2.728007 GAGAAAGTGGGGAGGGATTTG 58.272 52.381 0.00 0.00 0.00 2.32
456 458 1.186200 GAAAGTGGGGAGGGATTTGC 58.814 55.000 0.00 0.00 0.00 3.68
457 459 0.786435 AAAGTGGGGAGGGATTTGCT 59.214 50.000 0.00 0.00 0.00 3.91
458 460 0.040204 AAGTGGGGAGGGATTTGCTG 59.960 55.000 0.00 0.00 0.00 4.41
459 461 2.054453 GTGGGGAGGGATTTGCTGC 61.054 63.158 0.00 0.00 0.00 5.25
460 462 2.830370 GGGGAGGGATTTGCTGCG 60.830 66.667 0.00 0.00 0.00 5.18
461 463 2.830370 GGGAGGGATTTGCTGCGG 60.830 66.667 0.00 0.00 0.00 5.69
462 464 2.830370 GGAGGGATTTGCTGCGGG 60.830 66.667 0.00 0.00 0.00 6.13
463 465 2.044946 GAGGGATTTGCTGCGGGT 60.045 61.111 0.00 0.00 0.00 5.28
464 466 1.223487 GAGGGATTTGCTGCGGGTA 59.777 57.895 0.00 0.00 0.00 3.69
465 467 0.815615 GAGGGATTTGCTGCGGGTAG 60.816 60.000 0.00 0.00 0.00 3.18
466 468 1.223487 GGGATTTGCTGCGGGTAGA 59.777 57.895 0.00 0.00 0.00 2.59
467 469 0.815615 GGGATTTGCTGCGGGTAGAG 60.816 60.000 0.00 0.00 0.00 2.43
468 470 1.440145 GGATTTGCTGCGGGTAGAGC 61.440 60.000 0.00 0.00 35.65 4.09
469 471 1.766143 GATTTGCTGCGGGTAGAGCG 61.766 60.000 0.00 0.00 38.09 5.03
470 472 2.238847 ATTTGCTGCGGGTAGAGCGA 62.239 55.000 0.00 0.00 38.09 4.93
471 473 2.835701 TTTGCTGCGGGTAGAGCGAG 62.836 60.000 0.00 0.00 38.09 5.03
472 474 3.518998 GCTGCGGGTAGAGCGAGA 61.519 66.667 0.00 0.00 37.44 4.04
473 475 2.718731 CTGCGGGTAGAGCGAGAG 59.281 66.667 0.00 0.00 37.44 3.20
474 476 1.820056 CTGCGGGTAGAGCGAGAGA 60.820 63.158 0.00 0.00 37.44 3.10
475 477 1.377366 CTGCGGGTAGAGCGAGAGAA 61.377 60.000 0.00 0.00 37.44 2.87
476 478 0.963856 TGCGGGTAGAGCGAGAGAAA 60.964 55.000 0.00 0.00 37.44 2.52
477 479 0.172803 GCGGGTAGAGCGAGAGAAAA 59.827 55.000 0.00 0.00 0.00 2.29
478 480 1.799548 GCGGGTAGAGCGAGAGAAAAG 60.800 57.143 0.00 0.00 0.00 2.27
479 481 1.473278 CGGGTAGAGCGAGAGAAAAGT 59.527 52.381 0.00 0.00 0.00 2.66
480 482 2.732597 CGGGTAGAGCGAGAGAAAAGTG 60.733 54.545 0.00 0.00 0.00 3.16
481 483 2.231721 GGGTAGAGCGAGAGAAAAGTGT 59.768 50.000 0.00 0.00 0.00 3.55
482 484 3.246619 GGTAGAGCGAGAGAAAAGTGTG 58.753 50.000 0.00 0.00 0.00 3.82
483 485 2.447244 AGAGCGAGAGAAAAGTGTGG 57.553 50.000 0.00 0.00 0.00 4.17
484 486 1.689273 AGAGCGAGAGAAAAGTGTGGT 59.311 47.619 0.00 0.00 0.00 4.16
485 487 2.103263 AGAGCGAGAGAAAAGTGTGGTT 59.897 45.455 0.00 0.00 0.00 3.67
486 488 2.872858 GAGCGAGAGAAAAGTGTGGTTT 59.127 45.455 0.00 0.00 0.00 3.27
487 489 3.279434 AGCGAGAGAAAAGTGTGGTTTT 58.721 40.909 0.00 0.00 32.18 2.43
488 490 3.694566 AGCGAGAGAAAAGTGTGGTTTTT 59.305 39.130 0.00 0.00 29.58 1.94
489 491 4.879545 AGCGAGAGAAAAGTGTGGTTTTTA 59.120 37.500 0.00 0.00 29.58 1.52
490 492 5.007724 AGCGAGAGAAAAGTGTGGTTTTTAG 59.992 40.000 0.00 0.00 29.58 1.85
491 493 5.220796 GCGAGAGAAAAGTGTGGTTTTTAGT 60.221 40.000 0.00 0.00 29.58 2.24
492 494 6.192360 CGAGAGAAAAGTGTGGTTTTTAGTG 58.808 40.000 0.00 0.00 29.58 2.74
493 495 6.451064 AGAGAAAAGTGTGGTTTTTAGTGG 57.549 37.500 0.00 0.00 29.58 4.00
494 496 5.949952 AGAGAAAAGTGTGGTTTTTAGTGGT 59.050 36.000 0.00 0.00 29.58 4.16
495 497 6.095021 AGAGAAAAGTGTGGTTTTTAGTGGTC 59.905 38.462 0.00 0.00 29.58 4.02
496 498 4.994907 AAAGTGTGGTTTTTAGTGGTCC 57.005 40.909 0.00 0.00 0.00 4.46
497 499 2.940158 AGTGTGGTTTTTAGTGGTCCC 58.060 47.619 0.00 0.00 0.00 4.46
498 500 1.605232 GTGTGGTTTTTAGTGGTCCCG 59.395 52.381 0.00 0.00 0.00 5.14
499 501 1.489649 TGTGGTTTTTAGTGGTCCCGA 59.510 47.619 0.00 0.00 0.00 5.14
500 502 2.148768 GTGGTTTTTAGTGGTCCCGAG 58.851 52.381 0.00 0.00 0.00 4.63
501 503 2.048601 TGGTTTTTAGTGGTCCCGAGA 58.951 47.619 0.00 0.00 0.00 4.04
502 504 2.438763 TGGTTTTTAGTGGTCCCGAGAA 59.561 45.455 0.00 0.00 0.00 2.87
503 505 3.117963 TGGTTTTTAGTGGTCCCGAGAAA 60.118 43.478 0.00 0.00 0.00 2.52
504 506 3.884693 GGTTTTTAGTGGTCCCGAGAAAA 59.115 43.478 0.00 0.00 0.00 2.29
505 507 4.338964 GGTTTTTAGTGGTCCCGAGAAAAA 59.661 41.667 0.00 0.00 0.00 1.94
506 508 5.276270 GTTTTTAGTGGTCCCGAGAAAAAC 58.724 41.667 12.02 12.02 38.69 2.43
507 509 4.426736 TTTAGTGGTCCCGAGAAAAACT 57.573 40.909 0.00 0.00 0.00 2.66
508 510 5.549742 TTTAGTGGTCCCGAGAAAAACTA 57.450 39.130 0.00 0.00 0.00 2.24
509 511 5.549742 TTAGTGGTCCCGAGAAAAACTAA 57.450 39.130 0.00 0.00 0.00 2.24
510 512 3.736720 AGTGGTCCCGAGAAAAACTAAC 58.263 45.455 0.00 0.00 0.00 2.34
511 513 2.810274 GTGGTCCCGAGAAAAACTAACC 59.190 50.000 0.00 0.00 0.00 2.85
512 514 2.707257 TGGTCCCGAGAAAAACTAACCT 59.293 45.455 0.00 0.00 0.00 3.50
513 515 3.903090 TGGTCCCGAGAAAAACTAACCTA 59.097 43.478 0.00 0.00 0.00 3.08
514 516 4.347583 TGGTCCCGAGAAAAACTAACCTAA 59.652 41.667 0.00 0.00 0.00 2.69
515 517 5.163216 TGGTCCCGAGAAAAACTAACCTAAA 60.163 40.000 0.00 0.00 0.00 1.85
516 518 5.942236 GGTCCCGAGAAAAACTAACCTAAAT 59.058 40.000 0.00 0.00 0.00 1.40
517 519 7.105588 GGTCCCGAGAAAAACTAACCTAAATA 58.894 38.462 0.00 0.00 0.00 1.40
518 520 7.607607 GGTCCCGAGAAAAACTAACCTAAATAA 59.392 37.037 0.00 0.00 0.00 1.40
519 521 8.663025 GTCCCGAGAAAAACTAACCTAAATAAG 58.337 37.037 0.00 0.00 0.00 1.73
520 522 8.377799 TCCCGAGAAAAACTAACCTAAATAAGT 58.622 33.333 0.00 0.00 0.00 2.24
521 523 9.657419 CCCGAGAAAAACTAACCTAAATAAGTA 57.343 33.333 0.00 0.00 0.00 2.24
529 531 9.955102 AAACTAACCTAAATAAGTACCTCTTGG 57.045 33.333 0.00 0.00 37.56 3.61
530 532 8.906238 ACTAACCTAAATAAGTACCTCTTGGA 57.094 34.615 0.00 0.00 37.56 3.53
531 533 9.503369 ACTAACCTAAATAAGTACCTCTTGGAT 57.497 33.333 0.00 0.00 37.56 3.41
532 534 9.765795 CTAACCTAAATAAGTACCTCTTGGATG 57.234 37.037 0.00 0.00 37.56 3.51
533 535 7.138054 ACCTAAATAAGTACCTCTTGGATGG 57.862 40.000 0.00 0.00 37.56 3.51
534 536 6.101296 ACCTAAATAAGTACCTCTTGGATGGG 59.899 42.308 0.00 0.00 37.56 4.00
535 537 6.101296 CCTAAATAAGTACCTCTTGGATGGGT 59.899 42.308 0.00 0.00 37.56 4.51
536 538 6.402981 AAATAAGTACCTCTTGGATGGGTT 57.597 37.500 0.00 0.00 37.56 4.11
537 539 7.519347 AAATAAGTACCTCTTGGATGGGTTA 57.481 36.000 0.00 0.00 37.56 2.85
538 540 6.749036 ATAAGTACCTCTTGGATGGGTTAG 57.251 41.667 0.00 0.00 37.56 2.34
539 541 4.348020 AGTACCTCTTGGATGGGTTAGA 57.652 45.455 0.00 0.00 37.04 2.10
540 542 4.897051 AGTACCTCTTGGATGGGTTAGAT 58.103 43.478 0.00 0.00 37.04 1.98
541 543 5.289510 AGTACCTCTTGGATGGGTTAGATT 58.710 41.667 0.00 0.00 37.04 2.40
542 544 5.731678 AGTACCTCTTGGATGGGTTAGATTT 59.268 40.000 0.00 0.00 37.04 2.17
543 545 5.536497 ACCTCTTGGATGGGTTAGATTTT 57.464 39.130 0.00 0.00 37.04 1.82
544 546 5.903923 ACCTCTTGGATGGGTTAGATTTTT 58.096 37.500 0.00 0.00 37.04 1.94
564 566 6.855763 TTTTTGAATGGGTTAGATGCATCT 57.144 33.333 30.85 30.85 40.86 2.90
565 567 7.953005 TTTTTGAATGGGTTAGATGCATCTA 57.047 32.000 28.69 28.69 38.32 1.98
566 568 7.953005 TTTTGAATGGGTTAGATGCATCTAA 57.047 32.000 34.91 34.91 44.63 2.10
577 579 7.859325 TTAGATGCATCTAACCCAAACTAAC 57.141 36.000 34.91 4.14 42.66 2.34
578 580 5.193679 AGATGCATCTAACCCAAACTAACC 58.806 41.667 27.73 0.00 34.85 2.85
579 581 3.692690 TGCATCTAACCCAAACTAACCC 58.307 45.455 0.00 0.00 0.00 4.11
580 582 3.332485 TGCATCTAACCCAAACTAACCCT 59.668 43.478 0.00 0.00 0.00 4.34
581 583 3.945921 GCATCTAACCCAAACTAACCCTC 59.054 47.826 0.00 0.00 0.00 4.30
582 584 4.524053 CATCTAACCCAAACTAACCCTCC 58.476 47.826 0.00 0.00 0.00 4.30
583 585 3.878086 TCTAACCCAAACTAACCCTCCT 58.122 45.455 0.00 0.00 0.00 3.69
584 586 2.971901 AACCCAAACTAACCCTCCTG 57.028 50.000 0.00 0.00 0.00 3.86
585 587 1.829138 ACCCAAACTAACCCTCCTGT 58.171 50.000 0.00 0.00 0.00 4.00
586 588 2.141067 ACCCAAACTAACCCTCCTGTT 58.859 47.619 0.00 0.00 0.00 3.16
587 589 2.516702 ACCCAAACTAACCCTCCTGTTT 59.483 45.455 0.00 0.00 33.56 2.83
588 590 2.890945 CCCAAACTAACCCTCCTGTTTG 59.109 50.000 9.59 9.59 44.90 2.93
590 592 3.827722 CAAACTAACCCTCCTGTTTGGA 58.172 45.455 8.90 0.00 42.93 3.53
591 593 4.407365 CAAACTAACCCTCCTGTTTGGAT 58.593 43.478 8.90 0.00 45.16 3.41
592 594 5.566469 CAAACTAACCCTCCTGTTTGGATA 58.434 41.667 8.90 0.00 45.16 2.59
593 595 6.187682 CAAACTAACCCTCCTGTTTGGATAT 58.812 40.000 8.90 0.00 45.16 1.63
594 596 6.402981 AACTAACCCTCCTGTTTGGATATT 57.597 37.500 0.00 0.00 45.16 1.28
595 597 6.402981 ACTAACCCTCCTGTTTGGATATTT 57.597 37.500 0.00 0.00 45.16 1.40
596 598 6.800890 ACTAACCCTCCTGTTTGGATATTTT 58.199 36.000 0.00 0.00 45.16 1.82
597 599 7.246027 ACTAACCCTCCTGTTTGGATATTTTT 58.754 34.615 0.00 0.00 45.16 1.94
598 600 6.358974 AACCCTCCTGTTTGGATATTTTTG 57.641 37.500 0.00 0.00 45.16 2.44
599 601 4.777366 ACCCTCCTGTTTGGATATTTTTGG 59.223 41.667 0.00 0.00 45.16 3.28
600 602 4.777366 CCCTCCTGTTTGGATATTTTTGGT 59.223 41.667 0.00 0.00 45.16 3.67
601 603 5.248248 CCCTCCTGTTTGGATATTTTTGGTT 59.752 40.000 0.00 0.00 45.16 3.67
602 604 6.439058 CCCTCCTGTTTGGATATTTTTGGTTA 59.561 38.462 0.00 0.00 45.16 2.85
603 605 7.363793 CCCTCCTGTTTGGATATTTTTGGTTAG 60.364 40.741 0.00 0.00 45.16 2.34
604 606 7.178451 CCTCCTGTTTGGATATTTTTGGTTAGT 59.822 37.037 0.00 0.00 45.16 2.24
605 607 8.485578 TCCTGTTTGGATATTTTTGGTTAGTT 57.514 30.769 0.00 0.00 40.56 2.24
606 608 8.364142 TCCTGTTTGGATATTTTTGGTTAGTTG 58.636 33.333 0.00 0.00 40.56 3.16
607 609 8.364142 CCTGTTTGGATATTTTTGGTTAGTTGA 58.636 33.333 0.00 0.00 38.35 3.18
608 610 9.410556 CTGTTTGGATATTTTTGGTTAGTTGAG 57.589 33.333 0.00 0.00 0.00 3.02
609 611 8.919145 TGTTTGGATATTTTTGGTTAGTTGAGT 58.081 29.630 0.00 0.00 0.00 3.41
610 612 9.406828 GTTTGGATATTTTTGGTTAGTTGAGTC 57.593 33.333 0.00 0.00 0.00 3.36
611 613 7.696992 TGGATATTTTTGGTTAGTTGAGTCC 57.303 36.000 0.00 0.00 0.00 3.85
612 614 7.235079 TGGATATTTTTGGTTAGTTGAGTCCA 58.765 34.615 0.00 0.00 0.00 4.02
613 615 7.726291 TGGATATTTTTGGTTAGTTGAGTCCAA 59.274 33.333 0.00 0.00 38.04 3.53
614 616 8.581578 GGATATTTTTGGTTAGTTGAGTCCAAA 58.418 33.333 4.43 4.43 44.65 3.28
615 617 9.406828 GATATTTTTGGTTAGTTGAGTCCAAAC 57.593 33.333 7.57 0.00 45.54 2.93
616 618 6.844097 TTTTTGGTTAGTTGAGTCCAAACT 57.156 33.333 7.57 1.87 45.54 2.66
617 619 7.941431 TTTTTGGTTAGTTGAGTCCAAACTA 57.059 32.000 7.57 0.15 45.54 2.24
618 620 7.941431 TTTTGGTTAGTTGAGTCCAAACTAA 57.059 32.000 10.32 10.32 45.54 2.24
619 621 8.528044 TTTTGGTTAGTTGAGTCCAAACTAAT 57.472 30.769 15.19 0.00 45.54 1.73
620 622 8.528044 TTTGGTTAGTTGAGTCCAAACTAATT 57.472 30.769 15.19 0.00 42.53 1.40
621 623 7.739498 TGGTTAGTTGAGTCCAAACTAATTC 57.261 36.000 15.19 12.13 35.28 2.17
622 624 7.284074 TGGTTAGTTGAGTCCAAACTAATTCA 58.716 34.615 15.19 13.76 35.28 2.57
623 625 7.776030 TGGTTAGTTGAGTCCAAACTAATTCAA 59.224 33.333 15.19 0.43 35.28 2.69
624 626 8.626526 GGTTAGTTGAGTCCAAACTAATTCAAA 58.373 33.333 15.19 0.00 35.28 2.69
625 627 9.447040 GTTAGTTGAGTCCAAACTAATTCAAAC 57.553 33.333 15.19 4.72 35.28 2.93
626 628 7.881775 AGTTGAGTCCAAACTAATTCAAACT 57.118 32.000 0.00 0.00 35.28 2.66
627 629 8.974060 AGTTGAGTCCAAACTAATTCAAACTA 57.026 30.769 0.00 0.00 35.28 2.24
628 630 9.403583 AGTTGAGTCCAAACTAATTCAAACTAA 57.596 29.630 0.00 0.00 35.28 2.24
629 631 9.447040 GTTGAGTCCAAACTAATTCAAACTAAC 57.553 33.333 0.00 0.00 35.28 2.34
630 632 8.974060 TGAGTCCAAACTAATTCAAACTAACT 57.026 30.769 0.00 0.00 35.28 2.24
631 633 9.052759 TGAGTCCAAACTAATTCAAACTAACTC 57.947 33.333 0.00 0.00 35.28 3.01
632 634 9.274206 GAGTCCAAACTAATTCAAACTAACTCT 57.726 33.333 0.00 0.00 35.28 3.24
638 640 9.856162 AAACTAATTCAAACTAACTCTAACCCA 57.144 29.630 0.00 0.00 0.00 4.51
640 642 9.449719 ACTAATTCAAACTAACTCTAACCCATG 57.550 33.333 0.00 0.00 0.00 3.66
641 643 9.667107 CTAATTCAAACTAACTCTAACCCATGA 57.333 33.333 0.00 0.00 0.00 3.07
642 644 8.934023 AATTCAAACTAACTCTAACCCATGAA 57.066 30.769 0.00 0.00 0.00 2.57
643 645 9.533831 AATTCAAACTAACTCTAACCCATGAAT 57.466 29.630 0.00 0.00 35.85 2.57
644 646 8.561738 TTCAAACTAACTCTAACCCATGAATC 57.438 34.615 0.00 0.00 0.00 2.52
645 647 7.918076 TCAAACTAACTCTAACCCATGAATCT 58.082 34.615 0.00 0.00 0.00 2.40
646 648 9.042450 TCAAACTAACTCTAACCCATGAATCTA 57.958 33.333 0.00 0.00 0.00 1.98
647 649 9.667107 CAAACTAACTCTAACCCATGAATCTAA 57.333 33.333 0.00 0.00 0.00 2.10
649 651 9.668497 AACTAACTCTAACCCATGAATCTAAAC 57.332 33.333 0.00 0.00 0.00 2.01
650 652 8.822805 ACTAACTCTAACCCATGAATCTAAACA 58.177 33.333 0.00 0.00 0.00 2.83
651 653 9.667107 CTAACTCTAACCCATGAATCTAAACAA 57.333 33.333 0.00 0.00 0.00 2.83
652 654 8.567285 AACTCTAACCCATGAATCTAAACAAG 57.433 34.615 0.00 0.00 0.00 3.16
653 655 7.918076 ACTCTAACCCATGAATCTAAACAAGA 58.082 34.615 0.00 0.00 39.02 3.02
654 656 7.824779 ACTCTAACCCATGAATCTAAACAAGAC 59.175 37.037 0.00 0.00 36.93 3.01
655 657 7.110155 TCTAACCCATGAATCTAAACAAGACC 58.890 38.462 0.00 0.00 36.93 3.85
656 658 5.255397 ACCCATGAATCTAAACAAGACCA 57.745 39.130 0.00 0.00 36.93 4.02
657 659 5.640147 ACCCATGAATCTAAACAAGACCAA 58.360 37.500 0.00 0.00 36.93 3.67
658 660 6.074648 ACCCATGAATCTAAACAAGACCAAA 58.925 36.000 0.00 0.00 36.93 3.28
659 661 6.553100 ACCCATGAATCTAAACAAGACCAAAA 59.447 34.615 0.00 0.00 36.93 2.44
660 662 7.235399 ACCCATGAATCTAAACAAGACCAAAAT 59.765 33.333 0.00 0.00 36.93 1.82
661 663 8.748412 CCCATGAATCTAAACAAGACCAAAATA 58.252 33.333 0.00 0.00 36.93 1.40
841 843 2.793946 GTGGATCCACGCATGTGC 59.206 61.111 28.52 3.94 45.04 4.57
845 847 1.650912 GATCCACGCATGTGCCATC 59.349 57.895 6.08 1.70 45.04 3.51
934 936 5.638133 ACCTCTATATAACGCCAAGACCTA 58.362 41.667 0.00 0.00 0.00 3.08
1014 1016 1.841277 ACCAATATGGCGTCCAAGGTA 59.159 47.619 2.68 0.00 42.67 3.08
1150 1152 4.394712 GAGGTGGTGGCGGTGGAG 62.395 72.222 0.00 0.00 0.00 3.86
1793 1795 2.684927 GCTAGGCATCCACATCAACCTT 60.685 50.000 0.00 0.00 0.00 3.50
1872 1874 0.534427 GTGCCCTAACTAATCCCGGC 60.534 60.000 0.00 0.00 36.91 6.13
1887 1889 2.295349 TCCCGGCGATACTATTGAGTTC 59.705 50.000 9.30 0.00 37.10 3.01
1888 1890 2.316792 CCGGCGATACTATTGAGTTCG 58.683 52.381 9.30 0.00 38.31 3.95
1911 1913 3.531538 GCGTATGATCTCCCACAAAGAA 58.468 45.455 0.00 0.00 0.00 2.52
1919 1921 4.086706 TCTCCCACAAAGAAAAGGAGAC 57.913 45.455 2.97 0.00 46.33 3.36
1920 1922 3.458118 TCTCCCACAAAGAAAAGGAGACA 59.542 43.478 2.97 0.00 46.33 3.41
1921 1923 3.551846 TCCCACAAAGAAAAGGAGACAC 58.448 45.455 0.00 0.00 0.00 3.67
1986 1988 3.797796 GCATGCATGCGTTCAATAATCAA 59.202 39.130 33.99 0.00 44.67 2.57
2016 2018 9.871238 TTGTTGCTTTGGTTTAGTTGTTTTATA 57.129 25.926 0.00 0.00 0.00 0.98
2068 2076 4.519540 GGTAGTGACCATTGCATTTTGT 57.480 40.909 0.00 0.00 46.12 2.83
2104 2113 2.032426 GTCCGTTTGTAGTTGGTGTTGG 59.968 50.000 0.00 0.00 0.00 3.77
2108 2117 3.119779 CGTTTGTAGTTGGTGTTGGTGTT 60.120 43.478 0.00 0.00 0.00 3.32
2123 2132 7.593644 GGTGTTGGTGTTGTTACATTATCTTTC 59.406 37.037 0.00 0.00 36.50 2.62
2208 2218 7.842982 TGCTACCAAGATACAACATAGTAACA 58.157 34.615 0.00 0.00 0.00 2.41
2300 2310 9.583765 ACCTTCTATTTCTCTATGTTACGAAAC 57.416 33.333 0.00 0.00 36.07 2.78
2301 2311 9.032420 CCTTCTATTTCTCTATGTTACGAAACC 57.968 37.037 0.00 0.00 34.49 3.27
2303 2313 7.495055 TCTATTTCTCTATGTTACGAAACCCC 58.505 38.462 0.00 0.00 34.49 4.95
2304 2314 4.476628 TTCTCTATGTTACGAAACCCCC 57.523 45.455 0.00 0.00 34.49 5.40
2308 2318 2.963599 ATGTTACGAAACCCCCAAGT 57.036 45.000 0.00 0.00 34.49 3.16
2385 2481 7.725818 AGACATCACATGATACTTGCTTATG 57.274 36.000 0.00 0.00 32.63 1.90
2443 2541 6.978343 TGTACCAATAAACCGAGATTTCAG 57.022 37.500 0.00 0.00 0.00 3.02
2445 2543 7.335627 TGTACCAATAAACCGAGATTTCAGAT 58.664 34.615 0.00 0.00 0.00 2.90
2470 2568 9.793259 ATCTAAAAAGTAGAATTTGACCACTCA 57.207 29.630 0.00 0.00 0.00 3.41
2504 5059 6.818233 AGCCTAGCTTAGATGGTAAGTTTAC 58.182 40.000 0.00 0.00 33.89 2.01
2515 5070 4.485875 TGGTAAGTTTACTGTGGGAGAGA 58.514 43.478 2.40 0.00 34.16 3.10
2520 5075 8.098912 GGTAAGTTTACTGTGGGAGAGAATTTA 58.901 37.037 2.40 0.00 34.16 1.40
2535 5152 7.274603 AGAGAATTTATGGTACGTAGGAGTC 57.725 40.000 0.00 0.00 0.00 3.36
2548 5165 7.388776 GGTACGTAGGAGTCCAAATTAAGTTTT 59.611 37.037 12.86 0.00 0.00 2.43
2552 5169 8.132995 CGTAGGAGTCCAAATTAAGTTTTGTTT 58.867 33.333 12.86 0.00 35.30 2.83
2594 5211 7.322664 TGTGATGAGGGCTTTCAAATAAATTC 58.677 34.615 0.00 0.00 0.00 2.17
2601 5218 9.237846 GAGGGCTTTCAAATAAATTCTATTTCG 57.762 33.333 0.00 0.00 0.00 3.46
2602 5219 8.966868 AGGGCTTTCAAATAAATTCTATTTCGA 58.033 29.630 0.00 0.00 0.00 3.71
2603 5220 9.750125 GGGCTTTCAAATAAATTCTATTTCGAT 57.250 29.630 0.00 0.00 0.00 3.59
2618 5235 9.653287 TTCTATTTCGATTACATCTTGTTGAGT 57.347 29.630 0.00 0.00 0.00 3.41
2619 5236 9.653287 TCTATTTCGATTACATCTTGTTGAGTT 57.347 29.630 0.00 0.00 0.00 3.01
2622 5239 9.965824 ATTTCGATTACATCTTGTTGAGTTTTT 57.034 25.926 0.00 0.00 0.00 1.94
2623 5240 9.445786 TTTCGATTACATCTTGTTGAGTTTTTC 57.554 29.630 0.00 0.00 0.00 2.29
2624 5241 8.148807 TCGATTACATCTTGTTGAGTTTTTCA 57.851 30.769 0.00 0.00 0.00 2.69
2625 5242 8.616942 TCGATTACATCTTGTTGAGTTTTTCAA 58.383 29.630 0.00 0.00 43.40 2.69
2626 5243 9.232082 CGATTACATCTTGTTGAGTTTTTCAAA 57.768 29.630 0.00 0.00 46.85 2.69
2629 5246 9.921637 TTACATCTTGTTGAGTTTTTCAAACTT 57.078 25.926 3.46 0.00 46.85 2.66
2630 5247 8.466086 ACATCTTGTTGAGTTTTTCAAACTTC 57.534 30.769 3.46 0.00 46.85 3.01
2631 5248 7.273381 ACATCTTGTTGAGTTTTTCAAACTTCG 59.727 33.333 3.46 0.00 46.85 3.79
2632 5249 6.904498 TCTTGTTGAGTTTTTCAAACTTCGA 58.096 32.000 3.46 0.00 46.85 3.71
2633 5250 7.535139 TCTTGTTGAGTTTTTCAAACTTCGAT 58.465 30.769 3.46 0.00 46.85 3.59
2634 5251 8.670135 TCTTGTTGAGTTTTTCAAACTTCGATA 58.330 29.630 3.46 0.00 46.85 2.92
2635 5252 9.284594 CTTGTTGAGTTTTTCAAACTTCGATAA 57.715 29.630 3.46 2.46 46.85 1.75
2636 5253 8.609478 TGTTGAGTTTTTCAAACTTCGATAAC 57.391 30.769 3.46 5.77 46.85 1.89
2637 5254 8.455682 TGTTGAGTTTTTCAAACTTCGATAACT 58.544 29.630 3.46 0.00 46.85 2.24
2667 5284 9.921637 ACATCTTGTTGAGTTTTTAAAACTTCA 57.078 25.926 21.83 17.40 0.00 3.02
2696 5313 9.940166 AACTTTTAACTCATAAAACTTGGTACG 57.060 29.630 0.00 0.00 38.30 3.67
2697 5314 9.328845 ACTTTTAACTCATAAAACTTGGTACGA 57.671 29.630 0.00 0.00 38.30 3.43
2701 5318 7.972832 AACTCATAAAACTTGGTACGATTGA 57.027 32.000 0.00 0.00 0.00 2.57
2702 5319 7.972832 ACTCATAAAACTTGGTACGATTGAA 57.027 32.000 0.00 0.00 0.00 2.69
2703 5320 8.561738 ACTCATAAAACTTGGTACGATTGAAT 57.438 30.769 0.00 0.00 0.00 2.57
2704 5321 8.450964 ACTCATAAAACTTGGTACGATTGAATG 58.549 33.333 0.00 0.00 0.00 2.67
2705 5322 8.554835 TCATAAAACTTGGTACGATTGAATGA 57.445 30.769 0.00 0.00 0.00 2.57
2706 5323 8.447833 TCATAAAACTTGGTACGATTGAATGAC 58.552 33.333 0.00 0.00 0.00 3.06
2707 5324 6.627395 AAAACTTGGTACGATTGAATGACA 57.373 33.333 0.00 0.00 0.00 3.58
2708 5325 6.627395 AAACTTGGTACGATTGAATGACAA 57.373 33.333 0.00 0.00 42.95 3.18
2709 5326 6.627395 AACTTGGTACGATTGAATGACAAA 57.373 33.333 0.00 0.00 42.03 2.83
2710 5327 6.241207 ACTTGGTACGATTGAATGACAAAG 57.759 37.500 0.00 0.00 42.03 2.77
2711 5328 5.763204 ACTTGGTACGATTGAATGACAAAGT 59.237 36.000 0.00 0.00 42.03 2.66
2712 5329 5.856126 TGGTACGATTGAATGACAAAGTC 57.144 39.130 0.00 0.00 42.03 3.01
2713 5330 5.301555 TGGTACGATTGAATGACAAAGTCA 58.698 37.500 1.95 1.95 46.90 3.41
2759 5376 4.386951 TGGTGTCCCATCGTGCGG 62.387 66.667 0.00 0.00 35.17 5.69
2764 5381 1.887707 GTCCCATCGTGCGGAATCC 60.888 63.158 0.00 0.00 0.00 3.01
2776 5393 3.439540 GAATCCGGCGGCTTTGCA 61.440 61.111 23.83 2.30 36.28 4.08
2792 5409 2.602322 GCAGATCGCGAGGCAATCC 61.602 63.158 16.66 0.00 0.00 3.01
2794 5411 2.027605 GATCGCGAGGCAATCCGA 59.972 61.111 16.66 0.00 35.84 4.55
2797 5414 2.369257 ATCGCGAGGCAATCCGACAT 62.369 55.000 16.66 0.00 34.75 3.06
2799 5416 2.537560 GCGAGGCAATCCGACATGG 61.538 63.158 0.00 0.00 37.47 3.66
2830 5447 2.361230 GCCCCCACACCTGCTAAC 60.361 66.667 0.00 0.00 0.00 2.34
2831 5448 2.907179 GCCCCCACACCTGCTAACT 61.907 63.158 0.00 0.00 0.00 2.24
2832 5449 1.767692 CCCCCACACCTGCTAACTT 59.232 57.895 0.00 0.00 0.00 2.66
2833 5450 0.112412 CCCCCACACCTGCTAACTTT 59.888 55.000 0.00 0.00 0.00 2.66
2846 5463 2.225727 GCTAACTTTCGGGTTCCTTGTG 59.774 50.000 0.00 0.00 0.00 3.33
2847 5464 2.721425 AACTTTCGGGTTCCTTGTGA 57.279 45.000 0.00 0.00 0.00 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.757745 AAAAACACACACAGAGTTCCG 57.242 42.857 0.00 0.00 30.37 4.30
33 34 4.472691 TCTGTTGAAAGAACTGATTGCG 57.527 40.909 0.00 0.00 0.00 4.85
38 39 7.630242 ATTCTGTTTCTGTTGAAAGAACTGA 57.370 32.000 0.00 0.00 42.15 3.41
47 48 4.439974 GGCACACAATTCTGTTTCTGTTGA 60.440 41.667 0.00 0.00 31.64 3.18
55 56 5.590259 GTGATATAGGGCACACAATTCTGTT 59.410 40.000 0.00 0.00 35.19 3.16
57 58 5.125356 TGTGATATAGGGCACACAATTCTG 58.875 41.667 0.00 0.00 39.86 3.02
103 105 5.690865 ACTTTTCCTATGGCCGATCAATTA 58.309 37.500 0.00 0.00 0.00 1.40
104 106 4.536765 ACTTTTCCTATGGCCGATCAATT 58.463 39.130 0.00 0.00 0.00 2.32
159 161 4.056740 TGCGATGTAGAAACCGTAAACAA 58.943 39.130 0.00 0.00 0.00 2.83
189 191 5.702670 ACACCTATCACACATCTTTGAACTG 59.297 40.000 0.00 0.00 0.00 3.16
190 192 5.869579 ACACCTATCACACATCTTTGAACT 58.130 37.500 0.00 0.00 0.00 3.01
217 219 6.671190 CAAAACTGTGCTATGAACTCATGAA 58.329 36.000 0.00 0.00 37.15 2.57
218 220 5.335113 GCAAAACTGTGCTATGAACTCATGA 60.335 40.000 2.36 0.00 41.51 3.07
219 221 4.855388 GCAAAACTGTGCTATGAACTCATG 59.145 41.667 2.36 0.00 41.51 3.07
220 222 4.520111 TGCAAAACTGTGCTATGAACTCAT 59.480 37.500 0.00 0.00 45.17 2.90
221 223 3.882288 TGCAAAACTGTGCTATGAACTCA 59.118 39.130 0.00 0.00 45.17 3.41
222 224 4.023707 AGTGCAAAACTGTGCTATGAACTC 60.024 41.667 0.00 0.00 45.17 3.01
223 225 3.885297 AGTGCAAAACTGTGCTATGAACT 59.115 39.130 0.00 0.00 45.17 3.01
224 226 4.228912 AGTGCAAAACTGTGCTATGAAC 57.771 40.909 0.00 0.00 45.17 3.18
225 227 5.049474 CACTAGTGCAAAACTGTGCTATGAA 60.049 40.000 10.54 0.00 45.17 2.57
228 230 4.389374 ACACTAGTGCAAAACTGTGCTAT 58.611 39.130 22.90 0.00 45.17 2.97
235 237 6.183360 GGTTTAAAGGACACTAGTGCAAAACT 60.183 38.462 22.90 10.61 43.40 2.66
253 255 9.856162 AAGTTAGAGTATCCAAACAGGTTTAAA 57.144 29.630 0.00 0.00 34.84 1.52
293 295 8.751242 GGGTTAGTTCAGAGTTAGAATCTAACT 58.249 37.037 29.50 29.50 38.26 2.24
294 296 8.751242 AGGGTTAGTTCAGAGTTAGAATCTAAC 58.249 37.037 21.94 21.94 37.95 2.34
295 297 8.750298 CAGGGTTAGTTCAGAGTTAGAATCTAA 58.250 37.037 0.00 0.00 0.00 2.10
296 298 8.114102 TCAGGGTTAGTTCAGAGTTAGAATCTA 58.886 37.037 0.00 0.00 0.00 1.98
297 299 6.954684 TCAGGGTTAGTTCAGAGTTAGAATCT 59.045 38.462 0.00 0.00 0.00 2.40
298 300 7.171630 TCAGGGTTAGTTCAGAGTTAGAATC 57.828 40.000 0.00 0.00 0.00 2.52
299 301 7.235812 AGTTCAGGGTTAGTTCAGAGTTAGAAT 59.764 37.037 0.00 0.00 0.00 2.40
300 302 6.553852 AGTTCAGGGTTAGTTCAGAGTTAGAA 59.446 38.462 0.00 0.00 0.00 2.10
301 303 6.075984 AGTTCAGGGTTAGTTCAGAGTTAGA 58.924 40.000 0.00 0.00 0.00 2.10
302 304 6.347859 AGTTCAGGGTTAGTTCAGAGTTAG 57.652 41.667 0.00 0.00 0.00 2.34
303 305 7.508296 AGTTAGTTCAGGGTTAGTTCAGAGTTA 59.492 37.037 0.00 0.00 0.00 2.24
304 306 6.326843 AGTTAGTTCAGGGTTAGTTCAGAGTT 59.673 38.462 0.00 0.00 0.00 3.01
305 307 5.839606 AGTTAGTTCAGGGTTAGTTCAGAGT 59.160 40.000 0.00 0.00 0.00 3.24
306 308 6.209788 AGAGTTAGTTCAGGGTTAGTTCAGAG 59.790 42.308 0.00 0.00 0.00 3.35
307 309 6.075984 AGAGTTAGTTCAGGGTTAGTTCAGA 58.924 40.000 0.00 0.00 0.00 3.27
308 310 6.347859 AGAGTTAGTTCAGGGTTAGTTCAG 57.652 41.667 0.00 0.00 0.00 3.02
309 311 7.008941 ACTAGAGTTAGTTCAGGGTTAGTTCA 58.991 38.462 0.00 0.00 36.75 3.18
310 312 7.176340 TGACTAGAGTTAGTTCAGGGTTAGTTC 59.824 40.741 0.00 0.00 40.21 3.01
311 313 7.008941 TGACTAGAGTTAGTTCAGGGTTAGTT 58.991 38.462 0.00 0.00 40.21 2.24
312 314 6.550163 TGACTAGAGTTAGTTCAGGGTTAGT 58.450 40.000 0.00 0.00 40.21 2.24
313 315 7.463961 TTGACTAGAGTTAGTTCAGGGTTAG 57.536 40.000 0.00 0.00 40.21 2.34
314 316 7.844493 TTTGACTAGAGTTAGTTCAGGGTTA 57.156 36.000 0.00 0.00 40.21 2.85
315 317 6.742559 TTTGACTAGAGTTAGTTCAGGGTT 57.257 37.500 0.00 0.00 40.21 4.11
316 318 6.742559 TTTTGACTAGAGTTAGTTCAGGGT 57.257 37.500 0.00 0.00 40.21 4.34
337 339 2.104622 CCCTGCCATCCAAACACTTTTT 59.895 45.455 0.00 0.00 0.00 1.94
338 340 1.693606 CCCTGCCATCCAAACACTTTT 59.306 47.619 0.00 0.00 0.00 2.27
339 341 1.341080 CCCTGCCATCCAAACACTTT 58.659 50.000 0.00 0.00 0.00 2.66
340 342 0.188342 ACCCTGCCATCCAAACACTT 59.812 50.000 0.00 0.00 0.00 3.16
341 343 0.188342 AACCCTGCCATCCAAACACT 59.812 50.000 0.00 0.00 0.00 3.55
342 344 1.818674 CTAACCCTGCCATCCAAACAC 59.181 52.381 0.00 0.00 0.00 3.32
343 345 1.707989 TCTAACCCTGCCATCCAAACA 59.292 47.619 0.00 0.00 0.00 2.83
344 346 2.507407 TCTAACCCTGCCATCCAAAC 57.493 50.000 0.00 0.00 0.00 2.93
345 347 2.580322 TCATCTAACCCTGCCATCCAAA 59.420 45.455 0.00 0.00 0.00 3.28
346 348 2.204463 TCATCTAACCCTGCCATCCAA 58.796 47.619 0.00 0.00 0.00 3.53
347 349 1.891933 TCATCTAACCCTGCCATCCA 58.108 50.000 0.00 0.00 0.00 3.41
348 350 2.856222 CTTCATCTAACCCTGCCATCC 58.144 52.381 0.00 0.00 0.00 3.51
349 351 2.225467 GCTTCATCTAACCCTGCCATC 58.775 52.381 0.00 0.00 0.00 3.51
350 352 1.475751 CGCTTCATCTAACCCTGCCAT 60.476 52.381 0.00 0.00 0.00 4.40
351 353 0.107703 CGCTTCATCTAACCCTGCCA 60.108 55.000 0.00 0.00 0.00 4.92
352 354 0.107654 ACGCTTCATCTAACCCTGCC 60.108 55.000 0.00 0.00 0.00 4.85
353 355 1.009829 CACGCTTCATCTAACCCTGC 58.990 55.000 0.00 0.00 0.00 4.85
354 356 1.207089 TCCACGCTTCATCTAACCCTG 59.793 52.381 0.00 0.00 0.00 4.45
355 357 1.568504 TCCACGCTTCATCTAACCCT 58.431 50.000 0.00 0.00 0.00 4.34
356 358 2.622064 ATCCACGCTTCATCTAACCC 57.378 50.000 0.00 0.00 0.00 4.11
357 359 3.050619 CGTATCCACGCTTCATCTAACC 58.949 50.000 0.00 0.00 42.05 2.85
380 382 2.884207 GCCCGTAAAGGCGTCTCG 60.884 66.667 0.00 0.00 44.57 4.04
387 389 1.740296 CTCACACCGCCCGTAAAGG 60.740 63.158 0.00 0.00 40.63 3.11
388 390 0.736325 CTCTCACACCGCCCGTAAAG 60.736 60.000 0.00 0.00 0.00 1.85
389 391 1.290955 CTCTCACACCGCCCGTAAA 59.709 57.895 0.00 0.00 0.00 2.01
390 392 2.642254 CCTCTCACACCGCCCGTAA 61.642 63.158 0.00 0.00 0.00 3.18
391 393 3.066190 CCTCTCACACCGCCCGTA 61.066 66.667 0.00 0.00 0.00 4.02
394 396 3.775654 CTCCCTCTCACACCGCCC 61.776 72.222 0.00 0.00 0.00 6.13
395 397 3.775654 CCTCCCTCTCACACCGCC 61.776 72.222 0.00 0.00 0.00 6.13
396 398 3.775654 CCCTCCCTCTCACACCGC 61.776 72.222 0.00 0.00 0.00 5.68
397 399 2.037367 TCCCTCCCTCTCACACCG 59.963 66.667 0.00 0.00 0.00 4.94
398 400 1.687493 CCTCCCTCCCTCTCACACC 60.687 68.421 0.00 0.00 0.00 4.16
399 401 1.687493 CCCTCCCTCCCTCTCACAC 60.687 68.421 0.00 0.00 0.00 3.82
400 402 1.862138 TCCCTCCCTCCCTCTCACA 60.862 63.158 0.00 0.00 0.00 3.58
401 403 1.075600 CTCCCTCCCTCCCTCTCAC 60.076 68.421 0.00 0.00 0.00 3.51
402 404 1.230650 TCTCCCTCCCTCCCTCTCA 60.231 63.158 0.00 0.00 0.00 3.27
403 405 1.541672 CTCTCCCTCCCTCCCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
404 406 2.018086 CCTCTCCCTCCCTCCCTCT 61.018 68.421 0.00 0.00 0.00 3.69
405 407 2.015726 TCCTCTCCCTCCCTCCCTC 61.016 68.421 0.00 0.00 0.00 4.30
406 408 2.133201 TCCTCTCCCTCCCTCCCT 59.867 66.667 0.00 0.00 0.00 4.20
407 409 2.284151 GTCCTCTCCCTCCCTCCC 59.716 72.222 0.00 0.00 0.00 4.30
408 410 2.123640 CGTCCTCTCCCTCCCTCC 60.124 72.222 0.00 0.00 0.00 4.30
409 411 1.152839 CTCGTCCTCTCCCTCCCTC 60.153 68.421 0.00 0.00 0.00 4.30
410 412 1.215679 TTCTCGTCCTCTCCCTCCCT 61.216 60.000 0.00 0.00 0.00 4.20
411 413 0.753848 CTTCTCGTCCTCTCCCTCCC 60.754 65.000 0.00 0.00 0.00 4.30
412 414 1.388837 GCTTCTCGTCCTCTCCCTCC 61.389 65.000 0.00 0.00 0.00 4.30
413 415 0.395173 AGCTTCTCGTCCTCTCCCTC 60.395 60.000 0.00 0.00 0.00 4.30
414 416 0.040499 AAGCTTCTCGTCCTCTCCCT 59.960 55.000 0.00 0.00 0.00 4.20
415 417 0.458260 GAAGCTTCTCGTCCTCTCCC 59.542 60.000 19.44 0.00 0.00 4.30
416 418 0.099791 CGAAGCTTCTCGTCCTCTCC 59.900 60.000 23.50 0.00 34.08 3.71
417 419 1.063469 CTCGAAGCTTCTCGTCCTCTC 59.937 57.143 23.50 0.00 39.84 3.20
418 420 1.091537 CTCGAAGCTTCTCGTCCTCT 58.908 55.000 23.50 0.00 39.84 3.69
419 421 1.088306 TCTCGAAGCTTCTCGTCCTC 58.912 55.000 23.50 0.00 39.84 3.71
420 422 1.535833 TTCTCGAAGCTTCTCGTCCT 58.464 50.000 23.50 0.00 39.84 3.85
421 423 2.255316 CTTTCTCGAAGCTTCTCGTCC 58.745 52.381 23.50 0.00 39.84 4.79
422 424 2.659279 CACTTTCTCGAAGCTTCTCGTC 59.341 50.000 23.50 0.00 39.04 4.20
423 425 2.608261 CCACTTTCTCGAAGCTTCTCGT 60.608 50.000 23.50 8.68 39.04 4.18
424 426 1.989165 CCACTTTCTCGAAGCTTCTCG 59.011 52.381 23.50 13.05 39.04 4.04
425 427 2.342179 CCCACTTTCTCGAAGCTTCTC 58.658 52.381 23.50 0.00 39.04 2.87
426 428 1.002544 CCCCACTTTCTCGAAGCTTCT 59.997 52.381 23.50 0.37 39.04 2.85
427 429 1.002087 TCCCCACTTTCTCGAAGCTTC 59.998 52.381 16.84 16.84 39.04 3.86
428 430 1.002544 CTCCCCACTTTCTCGAAGCTT 59.997 52.381 0.00 0.00 39.04 3.74
429 431 0.610687 CTCCCCACTTTCTCGAAGCT 59.389 55.000 0.00 0.00 39.04 3.74
430 432 0.391793 CCTCCCCACTTTCTCGAAGC 60.392 60.000 0.00 0.00 39.04 3.86
431 433 0.250513 CCCTCCCCACTTTCTCGAAG 59.749 60.000 0.00 0.00 41.32 3.79
432 434 0.178915 TCCCTCCCCACTTTCTCGAA 60.179 55.000 0.00 0.00 0.00 3.71
433 435 0.042731 ATCCCTCCCCACTTTCTCGA 59.957 55.000 0.00 0.00 0.00 4.04
434 436 0.912486 AATCCCTCCCCACTTTCTCG 59.088 55.000 0.00 0.00 0.00 4.04
435 437 2.728007 CAAATCCCTCCCCACTTTCTC 58.272 52.381 0.00 0.00 0.00 2.87
436 438 1.272704 GCAAATCCCTCCCCACTTTCT 60.273 52.381 0.00 0.00 0.00 2.52
437 439 1.186200 GCAAATCCCTCCCCACTTTC 58.814 55.000 0.00 0.00 0.00 2.62
438 440 0.786435 AGCAAATCCCTCCCCACTTT 59.214 50.000 0.00 0.00 0.00 2.66
439 441 0.040204 CAGCAAATCCCTCCCCACTT 59.960 55.000 0.00 0.00 0.00 3.16
440 442 1.693640 CAGCAAATCCCTCCCCACT 59.306 57.895 0.00 0.00 0.00 4.00
441 443 2.054453 GCAGCAAATCCCTCCCCAC 61.054 63.158 0.00 0.00 0.00 4.61
442 444 2.360191 GCAGCAAATCCCTCCCCA 59.640 61.111 0.00 0.00 0.00 4.96
443 445 2.830370 CGCAGCAAATCCCTCCCC 60.830 66.667 0.00 0.00 0.00 4.81
444 446 2.830370 CCGCAGCAAATCCCTCCC 60.830 66.667 0.00 0.00 0.00 4.30
445 447 2.265467 TACCCGCAGCAAATCCCTCC 62.265 60.000 0.00 0.00 0.00 4.30
446 448 0.815615 CTACCCGCAGCAAATCCCTC 60.816 60.000 0.00 0.00 0.00 4.30
447 449 1.224592 CTACCCGCAGCAAATCCCT 59.775 57.895 0.00 0.00 0.00 4.20
448 450 0.815615 CTCTACCCGCAGCAAATCCC 60.816 60.000 0.00 0.00 0.00 3.85
449 451 1.440145 GCTCTACCCGCAGCAAATCC 61.440 60.000 0.00 0.00 35.56 3.01
450 452 1.766143 CGCTCTACCCGCAGCAAATC 61.766 60.000 0.00 0.00 35.15 2.17
451 453 1.815421 CGCTCTACCCGCAGCAAAT 60.815 57.895 0.00 0.00 35.15 2.32
452 454 2.434185 CGCTCTACCCGCAGCAAA 60.434 61.111 0.00 0.00 35.15 3.68
453 455 3.356639 CTCGCTCTACCCGCAGCAA 62.357 63.158 0.00 0.00 35.15 3.91
454 456 3.826754 CTCGCTCTACCCGCAGCA 61.827 66.667 0.00 0.00 35.15 4.41
455 457 3.477224 CTCTCGCTCTACCCGCAGC 62.477 68.421 0.00 0.00 0.00 5.25
456 458 1.377366 TTCTCTCGCTCTACCCGCAG 61.377 60.000 0.00 0.00 0.00 5.18
457 459 0.963856 TTTCTCTCGCTCTACCCGCA 60.964 55.000 0.00 0.00 0.00 5.69
458 460 0.172803 TTTTCTCTCGCTCTACCCGC 59.827 55.000 0.00 0.00 0.00 6.13
459 461 1.473278 ACTTTTCTCTCGCTCTACCCG 59.527 52.381 0.00 0.00 0.00 5.28
460 462 2.231721 ACACTTTTCTCTCGCTCTACCC 59.768 50.000 0.00 0.00 0.00 3.69
461 463 3.246619 CACACTTTTCTCTCGCTCTACC 58.753 50.000 0.00 0.00 0.00 3.18
462 464 3.246619 CCACACTTTTCTCTCGCTCTAC 58.753 50.000 0.00 0.00 0.00 2.59
463 465 2.891580 ACCACACTTTTCTCTCGCTCTA 59.108 45.455 0.00 0.00 0.00 2.43
464 466 1.689273 ACCACACTTTTCTCTCGCTCT 59.311 47.619 0.00 0.00 0.00 4.09
465 467 2.156343 ACCACACTTTTCTCTCGCTC 57.844 50.000 0.00 0.00 0.00 5.03
466 468 2.622064 AACCACACTTTTCTCTCGCT 57.378 45.000 0.00 0.00 0.00 4.93
467 469 3.692791 AAAACCACACTTTTCTCTCGC 57.307 42.857 0.00 0.00 0.00 5.03
468 470 6.192360 CACTAAAAACCACACTTTTCTCTCG 58.808 40.000 0.00 0.00 0.00 4.04
469 471 6.095021 ACCACTAAAAACCACACTTTTCTCTC 59.905 38.462 0.00 0.00 0.00 3.20
470 472 5.949952 ACCACTAAAAACCACACTTTTCTCT 59.050 36.000 0.00 0.00 0.00 3.10
471 473 6.203808 ACCACTAAAAACCACACTTTTCTC 57.796 37.500 0.00 0.00 0.00 2.87
472 474 5.126545 GGACCACTAAAAACCACACTTTTCT 59.873 40.000 0.00 0.00 0.00 2.52
473 475 5.345702 GGACCACTAAAAACCACACTTTTC 58.654 41.667 0.00 0.00 0.00 2.29
474 476 4.160814 GGGACCACTAAAAACCACACTTTT 59.839 41.667 0.00 0.00 0.00 2.27
475 477 3.702548 GGGACCACTAAAAACCACACTTT 59.297 43.478 0.00 0.00 0.00 2.66
476 478 3.293337 GGGACCACTAAAAACCACACTT 58.707 45.455 0.00 0.00 0.00 3.16
477 479 2.747135 CGGGACCACTAAAAACCACACT 60.747 50.000 0.00 0.00 0.00 3.55
478 480 1.605232 CGGGACCACTAAAAACCACAC 59.395 52.381 0.00 0.00 0.00 3.82
479 481 1.489649 TCGGGACCACTAAAAACCACA 59.510 47.619 0.00 0.00 0.00 4.17
480 482 2.148768 CTCGGGACCACTAAAAACCAC 58.851 52.381 0.00 0.00 0.00 4.16
481 483 2.048601 TCTCGGGACCACTAAAAACCA 58.951 47.619 0.00 0.00 0.00 3.67
482 484 2.845363 TCTCGGGACCACTAAAAACC 57.155 50.000 0.00 0.00 0.00 3.27
483 485 5.066893 AGTTTTTCTCGGGACCACTAAAAAC 59.933 40.000 18.91 18.91 42.68 2.43
484 486 5.195185 AGTTTTTCTCGGGACCACTAAAAA 58.805 37.500 0.00 0.00 0.00 1.94
485 487 4.784177 AGTTTTTCTCGGGACCACTAAAA 58.216 39.130 0.00 0.00 0.00 1.52
486 488 4.426736 AGTTTTTCTCGGGACCACTAAA 57.573 40.909 0.00 0.00 0.00 1.85
487 489 5.299949 GTTAGTTTTTCTCGGGACCACTAA 58.700 41.667 6.19 6.19 0.00 2.24
488 490 4.262592 GGTTAGTTTTTCTCGGGACCACTA 60.263 45.833 0.00 0.00 0.00 2.74
489 491 3.495629 GGTTAGTTTTTCTCGGGACCACT 60.496 47.826 0.00 0.00 0.00 4.00
490 492 2.810274 GGTTAGTTTTTCTCGGGACCAC 59.190 50.000 0.00 0.00 0.00 4.16
491 493 2.707257 AGGTTAGTTTTTCTCGGGACCA 59.293 45.455 0.00 0.00 0.00 4.02
492 494 3.413846 AGGTTAGTTTTTCTCGGGACC 57.586 47.619 0.00 0.00 0.00 4.46
493 495 8.552083 TTATTTAGGTTAGTTTTTCTCGGGAC 57.448 34.615 0.00 0.00 0.00 4.46
494 496 8.377799 ACTTATTTAGGTTAGTTTTTCTCGGGA 58.622 33.333 0.00 0.00 0.00 5.14
495 497 8.557592 ACTTATTTAGGTTAGTTTTTCTCGGG 57.442 34.615 0.00 0.00 0.00 5.14
503 505 9.955102 CCAAGAGGTACTTATTTAGGTTAGTTT 57.045 33.333 0.00 0.00 41.55 2.66
504 506 9.330220 TCCAAGAGGTACTTATTTAGGTTAGTT 57.670 33.333 0.00 0.00 41.55 2.24
505 507 8.906238 TCCAAGAGGTACTTATTTAGGTTAGT 57.094 34.615 0.00 0.00 41.55 2.24
506 508 9.765795 CATCCAAGAGGTACTTATTTAGGTTAG 57.234 37.037 0.00 0.00 41.55 2.34
507 509 8.711170 CCATCCAAGAGGTACTTATTTAGGTTA 58.289 37.037 0.00 0.00 41.55 2.85
508 510 7.366551 CCCATCCAAGAGGTACTTATTTAGGTT 60.367 40.741 0.00 0.00 41.55 3.50
509 511 6.101296 CCCATCCAAGAGGTACTTATTTAGGT 59.899 42.308 0.00 0.00 41.55 3.08
510 512 6.101296 ACCCATCCAAGAGGTACTTATTTAGG 59.899 42.308 0.00 0.00 41.55 2.69
511 513 7.138054 ACCCATCCAAGAGGTACTTATTTAG 57.862 40.000 0.00 0.00 41.55 1.85
512 514 7.519347 AACCCATCCAAGAGGTACTTATTTA 57.481 36.000 0.00 0.00 41.55 1.40
513 515 6.402981 AACCCATCCAAGAGGTACTTATTT 57.597 37.500 0.00 0.00 41.55 1.40
514 516 6.906901 TCTAACCCATCCAAGAGGTACTTATT 59.093 38.462 0.00 0.00 41.55 1.40
515 517 6.449956 TCTAACCCATCCAAGAGGTACTTAT 58.550 40.000 0.00 0.00 41.55 1.73
516 518 5.845734 TCTAACCCATCCAAGAGGTACTTA 58.154 41.667 0.00 0.00 41.55 2.24
517 519 4.695606 TCTAACCCATCCAAGAGGTACTT 58.304 43.478 0.00 0.00 41.55 2.24
519 521 5.632034 AATCTAACCCATCCAAGAGGTAC 57.368 43.478 0.00 0.00 35.89 3.34
520 522 6.652205 AAAATCTAACCCATCCAAGAGGTA 57.348 37.500 0.00 0.00 35.89 3.08
521 523 5.536497 AAAATCTAACCCATCCAAGAGGT 57.464 39.130 0.00 0.00 35.89 3.85
541 543 6.855763 AGATGCATCTAACCCATTCAAAAA 57.144 33.333 27.73 0.00 34.85 1.94
542 544 7.953005 TTAGATGCATCTAACCCATTCAAAA 57.047 32.000 34.91 17.58 42.66 2.44
553 555 6.826741 GGTTAGTTTGGGTTAGATGCATCTAA 59.173 38.462 34.91 34.91 44.63 2.10
554 556 6.354130 GGTTAGTTTGGGTTAGATGCATCTA 58.646 40.000 28.69 28.69 38.32 1.98
555 557 5.193679 GGTTAGTTTGGGTTAGATGCATCT 58.806 41.667 30.85 30.85 40.86 2.90
556 558 4.338400 GGGTTAGTTTGGGTTAGATGCATC 59.662 45.833 19.37 19.37 0.00 3.91
557 559 4.017499 AGGGTTAGTTTGGGTTAGATGCAT 60.017 41.667 0.00 0.00 0.00 3.96
558 560 3.332485 AGGGTTAGTTTGGGTTAGATGCA 59.668 43.478 0.00 0.00 0.00 3.96
559 561 3.945921 GAGGGTTAGTTTGGGTTAGATGC 59.054 47.826 0.00 0.00 0.00 3.91
560 562 4.227527 AGGAGGGTTAGTTTGGGTTAGATG 59.772 45.833 0.00 0.00 0.00 2.90
561 563 4.227527 CAGGAGGGTTAGTTTGGGTTAGAT 59.772 45.833 0.00 0.00 0.00 1.98
562 564 3.585732 CAGGAGGGTTAGTTTGGGTTAGA 59.414 47.826 0.00 0.00 0.00 2.10
563 565 3.329814 ACAGGAGGGTTAGTTTGGGTTAG 59.670 47.826 0.00 0.00 0.00 2.34
564 566 3.329277 ACAGGAGGGTTAGTTTGGGTTA 58.671 45.455 0.00 0.00 0.00 2.85
565 567 2.141067 ACAGGAGGGTTAGTTTGGGTT 58.859 47.619 0.00 0.00 0.00 4.11
566 568 1.829138 ACAGGAGGGTTAGTTTGGGT 58.171 50.000 0.00 0.00 0.00 4.51
567 569 2.890945 CAAACAGGAGGGTTAGTTTGGG 59.109 50.000 8.55 0.00 44.17 4.12
569 571 3.827722 TCCAAACAGGAGGGTTAGTTTG 58.172 45.455 9.27 9.27 46.23 2.93
581 583 8.364142 TCAACTAACCAAAAATATCCAAACAGG 58.636 33.333 0.00 0.00 39.47 4.00
582 584 9.410556 CTCAACTAACCAAAAATATCCAAACAG 57.589 33.333 0.00 0.00 0.00 3.16
583 585 8.919145 ACTCAACTAACCAAAAATATCCAAACA 58.081 29.630 0.00 0.00 0.00 2.83
584 586 9.406828 GACTCAACTAACCAAAAATATCCAAAC 57.593 33.333 0.00 0.00 0.00 2.93
585 587 8.581578 GGACTCAACTAACCAAAAATATCCAAA 58.418 33.333 0.00 0.00 0.00 3.28
586 588 7.726291 TGGACTCAACTAACCAAAAATATCCAA 59.274 33.333 0.00 0.00 0.00 3.53
587 589 7.235079 TGGACTCAACTAACCAAAAATATCCA 58.765 34.615 0.00 0.00 0.00 3.41
588 590 7.696992 TGGACTCAACTAACCAAAAATATCC 57.303 36.000 0.00 0.00 0.00 2.59
595 597 8.528044 AATTAGTTTGGACTCAACTAACCAAA 57.472 30.769 0.00 0.00 45.87 3.28
596 598 7.776030 TGAATTAGTTTGGACTCAACTAACCAA 59.224 33.333 7.28 0.00 40.05 3.67
597 599 7.284074 TGAATTAGTTTGGACTCAACTAACCA 58.716 34.615 7.28 6.46 37.33 3.67
598 600 7.739498 TGAATTAGTTTGGACTCAACTAACC 57.261 36.000 7.28 4.46 37.33 2.85
599 601 9.447040 GTTTGAATTAGTTTGGACTCAACTAAC 57.553 33.333 7.28 0.00 37.33 2.34
600 602 9.403583 AGTTTGAATTAGTTTGGACTCAACTAA 57.596 29.630 7.52 7.52 37.33 2.24
601 603 8.974060 AGTTTGAATTAGTTTGGACTCAACTA 57.026 30.769 0.00 0.00 37.33 2.24
602 604 7.881775 AGTTTGAATTAGTTTGGACTCAACT 57.118 32.000 0.00 0.00 37.33 3.16
603 605 9.447040 GTTAGTTTGAATTAGTTTGGACTCAAC 57.553 33.333 0.00 0.00 37.33 3.18
604 606 9.403583 AGTTAGTTTGAATTAGTTTGGACTCAA 57.596 29.630 0.00 0.00 37.33 3.02
605 607 8.974060 AGTTAGTTTGAATTAGTTTGGACTCA 57.026 30.769 0.00 0.00 37.33 3.41
606 608 9.274206 AGAGTTAGTTTGAATTAGTTTGGACTC 57.726 33.333 0.00 0.00 37.33 3.36
612 614 9.856162 TGGGTTAGAGTTAGTTTGAATTAGTTT 57.144 29.630 0.00 0.00 0.00 2.66
614 616 9.449719 CATGGGTTAGAGTTAGTTTGAATTAGT 57.550 33.333 0.00 0.00 0.00 2.24
615 617 9.667107 TCATGGGTTAGAGTTAGTTTGAATTAG 57.333 33.333 0.00 0.00 0.00 1.73
617 619 8.934023 TTCATGGGTTAGAGTTAGTTTGAATT 57.066 30.769 0.00 0.00 0.00 2.17
618 620 9.178758 GATTCATGGGTTAGAGTTAGTTTGAAT 57.821 33.333 0.00 0.00 33.97 2.57
619 621 8.383175 AGATTCATGGGTTAGAGTTAGTTTGAA 58.617 33.333 0.00 0.00 0.00 2.69
620 622 7.918076 AGATTCATGGGTTAGAGTTAGTTTGA 58.082 34.615 0.00 0.00 0.00 2.69
621 623 9.667107 TTAGATTCATGGGTTAGAGTTAGTTTG 57.333 33.333 0.00 0.00 0.00 2.93
623 625 9.668497 GTTTAGATTCATGGGTTAGAGTTAGTT 57.332 33.333 0.00 0.00 0.00 2.24
624 626 8.822805 TGTTTAGATTCATGGGTTAGAGTTAGT 58.177 33.333 0.00 0.00 0.00 2.24
625 627 9.667107 TTGTTTAGATTCATGGGTTAGAGTTAG 57.333 33.333 0.00 0.00 0.00 2.34
626 628 9.667107 CTTGTTTAGATTCATGGGTTAGAGTTA 57.333 33.333 0.00 0.00 0.00 2.24
627 629 8.383175 TCTTGTTTAGATTCATGGGTTAGAGTT 58.617 33.333 0.00 0.00 0.00 3.01
628 630 7.824779 GTCTTGTTTAGATTCATGGGTTAGAGT 59.175 37.037 0.00 0.00 34.79 3.24
629 631 7.281100 GGTCTTGTTTAGATTCATGGGTTAGAG 59.719 40.741 0.00 0.00 34.79 2.43
630 632 7.110155 GGTCTTGTTTAGATTCATGGGTTAGA 58.890 38.462 0.00 0.00 34.79 2.10
631 633 6.884295 TGGTCTTGTTTAGATTCATGGGTTAG 59.116 38.462 0.00 0.00 34.79 2.34
632 634 6.785076 TGGTCTTGTTTAGATTCATGGGTTA 58.215 36.000 0.00 0.00 34.79 2.85
633 635 5.640147 TGGTCTTGTTTAGATTCATGGGTT 58.360 37.500 0.00 0.00 34.79 4.11
634 636 5.255397 TGGTCTTGTTTAGATTCATGGGT 57.745 39.130 0.00 0.00 34.79 4.51
635 637 6.588719 TTTGGTCTTGTTTAGATTCATGGG 57.411 37.500 0.00 0.00 34.79 4.00
663 665 2.943036 AGCTCCTTGGTCCGTAAAAA 57.057 45.000 0.00 0.00 0.00 1.94
664 666 4.563140 AATAGCTCCTTGGTCCGTAAAA 57.437 40.909 0.00 0.00 0.00 1.52
665 667 4.141869 GGTAATAGCTCCTTGGTCCGTAAA 60.142 45.833 0.00 0.00 0.00 2.01
666 668 3.385755 GGTAATAGCTCCTTGGTCCGTAA 59.614 47.826 0.00 0.00 0.00 3.18
667 669 2.961062 GGTAATAGCTCCTTGGTCCGTA 59.039 50.000 0.00 0.00 0.00 4.02
668 670 1.761198 GGTAATAGCTCCTTGGTCCGT 59.239 52.381 0.00 0.00 0.00 4.69
669 671 1.070289 GGGTAATAGCTCCTTGGTCCG 59.930 57.143 0.00 0.00 0.00 4.79
670 672 2.124411 TGGGTAATAGCTCCTTGGTCC 58.876 52.381 0.00 0.00 0.00 4.46
671 673 3.648545 AGATGGGTAATAGCTCCTTGGTC 59.351 47.826 0.00 0.00 0.00 4.02
672 674 3.669949 AGATGGGTAATAGCTCCTTGGT 58.330 45.455 0.00 0.00 0.00 3.67
673 675 4.713792 AAGATGGGTAATAGCTCCTTGG 57.286 45.455 0.00 0.00 0.00 3.61
674 676 9.793259 TTAATTAAGATGGGTAATAGCTCCTTG 57.207 33.333 0.00 0.00 0.00 3.61
841 843 1.615883 CAGGAGTCCGTGATAGGATGG 59.384 57.143 2.76 0.00 43.04 3.51
934 936 2.094494 CGAGTGTGTGAGTCTGGCTATT 60.094 50.000 0.00 0.00 0.00 1.73
1555 1557 2.808206 CCTCCTCCATACCCGCCAC 61.808 68.421 0.00 0.00 0.00 5.01
1556 1558 2.445845 CCTCCTCCATACCCGCCA 60.446 66.667 0.00 0.00 0.00 5.69
1557 1559 2.122989 TCCTCCTCCATACCCGCC 60.123 66.667 0.00 0.00 0.00 6.13
1558 1560 2.210711 CCTCCTCCTCCATACCCGC 61.211 68.421 0.00 0.00 0.00 6.13
1559 1561 2.210711 GCCTCCTCCTCCATACCCG 61.211 68.421 0.00 0.00 0.00 5.28
1560 1562 2.210711 CGCCTCCTCCTCCATACCC 61.211 68.421 0.00 0.00 0.00 3.69
1793 1795 1.690633 GAGGCTGAGGTGGATGGGA 60.691 63.158 0.00 0.00 0.00 4.37
1861 1863 4.084287 TCAATAGTATCGCCGGGATTAGT 58.916 43.478 2.18 0.45 36.55 2.24
1872 1874 1.379133 CGCGCGAACTCAATAGTATCG 59.621 52.381 28.94 0.00 38.32 2.92
1887 1889 2.016704 GTGGGAGATCATACGCGCG 61.017 63.158 30.96 30.96 0.00 6.86
1888 1890 0.529773 TTGTGGGAGATCATACGCGC 60.530 55.000 5.73 0.00 0.00 6.86
1911 1913 1.614413 GTGACCTCTCGTGTCTCCTTT 59.386 52.381 0.00 0.00 33.83 3.11
1919 1921 1.081376 GTGGACGTGACCTCTCGTG 60.081 63.158 7.11 0.00 44.60 4.35
1920 1922 2.614446 CGTGGACGTGACCTCTCGT 61.614 63.158 0.00 2.22 46.77 4.18
1921 1923 2.176055 CGTGGACGTGACCTCTCG 59.824 66.667 0.00 0.00 38.62 4.04
1986 1988 7.680442 ACAACTAAACCAAAGCAACAATTTT 57.320 28.000 0.00 0.00 0.00 1.82
2016 2018 5.919196 ACGACTCGCACGTTAAAAATAAAT 58.081 33.333 0.00 0.00 41.18 1.40
2017 2019 5.327502 ACGACTCGCACGTTAAAAATAAA 57.672 34.783 0.00 0.00 41.18 1.40
2019 2021 4.030529 GCTACGACTCGCACGTTAAAAATA 59.969 41.667 0.00 0.00 43.62 1.40
2020 2022 3.181537 GCTACGACTCGCACGTTAAAAAT 60.182 43.478 0.00 0.00 43.62 1.82
2026 2028 1.002250 CAAGCTACGACTCGCACGTT 61.002 55.000 0.00 0.00 43.62 3.99
2027 2029 1.442184 CAAGCTACGACTCGCACGT 60.442 57.895 0.00 0.00 45.75 4.49
2031 2033 0.169672 TACCACAAGCTACGACTCGC 59.830 55.000 0.00 0.00 0.00 5.03
2032 2034 1.467734 ACTACCACAAGCTACGACTCG 59.532 52.381 0.00 0.00 0.00 4.18
2068 2076 1.959985 ACGGACACATTCCATGCAAAA 59.040 42.857 0.00 0.00 46.29 2.44
2084 2093 2.290464 CCAACACCAACTACAAACGGA 58.710 47.619 0.00 0.00 0.00 4.69
2093 2102 3.422796 TGTAACAACACCAACACCAACT 58.577 40.909 0.00 0.00 0.00 3.16
2123 2132 9.991906 ATGCATCTTTCAAATCAATAATTAGGG 57.008 29.630 0.00 0.00 0.00 3.53
2177 2187 6.312399 TGTTGTATCTTGGTAGCAAAACTG 57.688 37.500 16.05 3.73 0.00 3.16
2178 2188 7.883311 ACTATGTTGTATCTTGGTAGCAAAACT 59.117 33.333 16.05 5.13 0.00 2.66
2179 2189 8.040716 ACTATGTTGTATCTTGGTAGCAAAAC 57.959 34.615 8.94 9.99 0.00 2.43
2180 2190 9.727859 TTACTATGTTGTATCTTGGTAGCAAAA 57.272 29.630 8.94 0.00 0.00 2.44
2181 2191 9.158233 GTTACTATGTTGTATCTTGGTAGCAAA 57.842 33.333 8.94 0.79 0.00 3.68
2182 2192 8.315482 TGTTACTATGTTGTATCTTGGTAGCAA 58.685 33.333 7.22 7.22 0.00 3.91
2183 2193 7.842982 TGTTACTATGTTGTATCTTGGTAGCA 58.157 34.615 0.00 0.00 0.00 3.49
2184 2194 8.765219 CATGTTACTATGTTGTATCTTGGTAGC 58.235 37.037 0.00 0.00 0.00 3.58
2185 2195 9.817809 ACATGTTACTATGTTGTATCTTGGTAG 57.182 33.333 0.00 0.00 38.05 3.18
2186 2196 9.594478 CACATGTTACTATGTTGTATCTTGGTA 57.406 33.333 0.00 0.00 39.17 3.25
2187 2197 8.318412 TCACATGTTACTATGTTGTATCTTGGT 58.682 33.333 0.00 0.00 39.17 3.67
2208 2218 3.055167 TGACTCGGATCCAACAATCACAT 60.055 43.478 13.41 0.00 0.00 3.21
2248 2258 5.534207 AGAACAAAGACAATGGATTGCAA 57.466 34.783 0.00 0.00 41.38 4.08
2300 2310 3.659183 ATTGAAGATGAGACTTGGGGG 57.341 47.619 0.00 0.00 0.00 5.40
2301 2311 3.129988 GCAATTGAAGATGAGACTTGGGG 59.870 47.826 10.34 0.00 0.00 4.96
2303 2313 4.458295 ACTGCAATTGAAGATGAGACTTGG 59.542 41.667 20.85 0.00 0.00 3.61
2304 2314 5.624344 ACTGCAATTGAAGATGAGACTTG 57.376 39.130 20.85 0.00 0.00 3.16
2308 2318 6.829229 ATTGAACTGCAATTGAAGATGAGA 57.171 33.333 20.85 2.48 44.68 3.27
2385 2481 7.662897 CCTAAGACCTCTTCCATTGTAGTATC 58.337 42.308 0.00 0.00 37.40 2.24
2394 2490 4.625963 AGTTAGCCTAAGACCTCTTCCAT 58.374 43.478 0.00 0.00 37.40 3.41
2445 2543 9.273016 CTGAGTGGTCAAATTCTACTTTTTAGA 57.727 33.333 0.00 0.00 30.14 2.10
2498 5053 7.112779 CCATAAATTCTCTCCCACAGTAAACT 58.887 38.462 0.00 0.00 0.00 2.66
2503 5058 5.395324 CGTACCATAAATTCTCTCCCACAGT 60.395 44.000 0.00 0.00 0.00 3.55
2504 5059 5.050490 CGTACCATAAATTCTCTCCCACAG 58.950 45.833 0.00 0.00 0.00 3.66
2515 5070 6.549433 TTGGACTCCTACGTACCATAAATT 57.451 37.500 2.99 0.00 0.00 1.82
2520 5075 6.155737 ACTTAATTTGGACTCCTACGTACCAT 59.844 38.462 2.99 0.00 0.00 3.55
2548 5165 6.203530 TCACAAGAAACACAAAAATGCAAACA 59.796 30.769 0.00 0.00 0.00 2.83
2552 5169 6.104665 TCATCACAAGAAACACAAAAATGCA 58.895 32.000 0.00 0.00 0.00 3.96
2560 5177 2.158623 AGCCCTCATCACAAGAAACACA 60.159 45.455 0.00 0.00 0.00 3.72
2600 5217 8.781067 TTGAAAAACTCAACAAGATGTAATCG 57.219 30.769 0.00 0.00 43.17 3.34
2603 5220 9.921637 AAGTTTGAAAAACTCAACAAGATGTAA 57.078 25.926 5.88 0.00 43.90 2.41
2604 5221 9.567848 GAAGTTTGAAAAACTCAACAAGATGTA 57.432 29.630 5.88 0.00 43.90 2.29
2605 5222 7.273381 CGAAGTTTGAAAAACTCAACAAGATGT 59.727 33.333 5.88 0.00 43.90 3.06
2606 5223 7.484641 TCGAAGTTTGAAAAACTCAACAAGATG 59.515 33.333 5.88 0.00 43.90 2.90
2607 5224 7.535139 TCGAAGTTTGAAAAACTCAACAAGAT 58.465 30.769 5.88 0.00 43.90 2.40
2608 5225 6.904498 TCGAAGTTTGAAAAACTCAACAAGA 58.096 32.000 5.88 0.00 43.90 3.02
2609 5226 7.740519 ATCGAAGTTTGAAAAACTCAACAAG 57.259 32.000 5.88 0.00 43.90 3.16
2610 5227 9.068008 GTTATCGAAGTTTGAAAAACTCAACAA 57.932 29.630 5.88 0.00 43.90 2.83
2611 5228 8.455682 AGTTATCGAAGTTTGAAAAACTCAACA 58.544 29.630 14.30 0.00 43.90 3.33
2612 5229 8.836959 AGTTATCGAAGTTTGAAAAACTCAAC 57.163 30.769 14.30 6.18 43.90 3.18
2676 5293 9.491675 TTCAATCGTACCAAGTTTTATGAGTTA 57.508 29.630 0.00 0.00 0.00 2.24
2681 5298 8.233868 TGTCATTCAATCGTACCAAGTTTTATG 58.766 33.333 0.00 0.00 0.00 1.90
2684 5301 6.627395 TGTCATTCAATCGTACCAAGTTTT 57.373 33.333 0.00 0.00 0.00 2.43
2721 5338 9.528018 ACACCATGTTTAACATCTTAGTTTTTG 57.472 29.630 7.71 0.00 36.53 2.44
2759 5376 3.401243 CTGCAAAGCCGCCGGATTC 62.401 63.158 7.27 0.00 27.99 2.52
2764 5381 4.228097 CGATCTGCAAAGCCGCCG 62.228 66.667 0.00 0.00 0.00 6.46
2765 5382 4.543084 GCGATCTGCAAAGCCGCC 62.543 66.667 10.16 0.00 45.45 6.13
2766 5383 4.876081 CGCGATCTGCAAAGCCGC 62.876 66.667 0.00 10.96 46.97 6.53
2768 5385 2.705826 CTCGCGATCTGCAAAGCC 59.294 61.111 10.36 0.00 46.97 4.35
2776 5393 2.028190 CGGATTGCCTCGCGATCT 59.972 61.111 10.36 0.00 45.77 2.75
2792 5409 3.129502 CACCTGCCAGCCATGTCG 61.130 66.667 0.00 0.00 0.00 4.35
2827 5444 3.842007 TCACAAGGAACCCGAAAGTTA 57.158 42.857 0.00 0.00 0.00 2.24
2830 5447 1.812571 CCATCACAAGGAACCCGAAAG 59.187 52.381 0.00 0.00 0.00 2.62
2831 5448 1.422024 TCCATCACAAGGAACCCGAAA 59.578 47.619 0.00 0.00 30.71 3.46
2832 5449 1.060729 TCCATCACAAGGAACCCGAA 58.939 50.000 0.00 0.00 30.71 4.30
2833 5450 1.060729 TTCCATCACAAGGAACCCGA 58.939 50.000 0.00 0.00 40.11 5.14
2846 5463 0.036388 TCGGGTGAGCTTGTTCCATC 60.036 55.000 0.00 0.00 0.00 3.51
2847 5464 2.066340 TCGGGTGAGCTTGTTCCAT 58.934 52.632 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.